Psyllid ID: psy14065

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490--
MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPDHKVSTAQKEAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENK
ccEEEEEEccHHHHHHHHHcccccccccccccccccEEcccHHHHHccccEEEEEcccHHHHHHHHHHHcccccccEEEEEEcccccccccccHHHHHHHHHHccccEEEEEccccHHHHHcccccEEEEEccccccHHHHHHHHccccEEEEEcccccHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccHHHHHHHHHHccccHHHHHHHHHcccEEccHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHcccccccccccccEEEcccccHHHHHcccccEEEEEccccccHHHHHHHHccccEEEEEcccccHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccccHHHHHHHHHccccHHHHHHHHHcccEEccHHHHHHHHHHHHHcccccc
cEEEEEEEccccHHHHHccccccccccccccccccEEEcccHHHHHccccEEEEEccHHHHHHHHHHHcccccccEEEEEEEccccccccccEEEHHHHHHHHccccEEEEccccHHHHHHHccccEEEEEcccHHHHHHHHHHHccccEEEEEEccccHEHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccHcHEEEEccccHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHccHHHHHHHHHHccccHHHHHHHHHHcccHcccccccEEEEEccccHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEcccEEEEEEcHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEcccccccEEEEEcccccccHHHHcccccccHHHHHHHHHcccEEEccHHHHHHHHHHHHcccccc
myvyeemidgkKLTEIINETHenvkylpghklppnvvavPDVVEAAKDADILVFVVPHQFIVRLCSQLlgkikpdavGLSLIKgfdraegggidlISHIITRNLKIKMTVLMGANLAGEVAEEKFCettigckdktlgpllhallqtpnfrvsvvddVDAVEICGALKNIVAcgagfvdglglgdnTKAAVIRLGLMEMVKFTelfypgaksatffescgvadlittcyggrnrkVSEAFVKTGKSIKDLEDEMlngqklqgpftaDEVNYMLKNknmenkfpLFTAVHKICIGEMKPQQFIDAIrehpdhkvstaQKEAVLISSLTSSHVAEEKFCettigckdktlgpllhallqtpnfrvsvvddVDAVEICGALKNIVAcgagfvdglglgdnTKAAVIRLGLMEMVKFTelfypgaksatffescgvadlittcyggrnrkVSEAFVKTGKSIKDLEDEMlngqklqgpftaDEVNYMLKNKNMENK
myvyeemidgkkLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITtcyggrnrkvseAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPDHKVSTAQKEAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITtcyggrnrkvseAFVKTGKSIKDLEDEMlngqklqgpftadeVNYMLKNKNMENK
MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPDHKVSTAQKEAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENK
***YEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSI************LQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIRE***********EAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKT**************************************
MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPDHKVSTAQKEAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKN****
MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPDHKVSTAQKEAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENK
MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPDHKVSTAQKEAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNK*****
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MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPDHKVSTAQKEAVLISSLTSSHVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query492 2.2.26 [Sep-21-2011]
Q27928360 Glycerol-3-phosphate dehy yes N/A 0.632 0.863 0.784 1e-138
P07735353 Glycerol-3-phosphate dehy N/A N/A 0.632 0.881 0.781 1e-138
Q27556350 Glycerol-3-phosphate dehy N/A N/A 0.632 0.888 0.778 1e-138
P13706363 Glycerol-3-phosphate dehy yes N/A 0.632 0.856 0.781 1e-138
O97463360 Glycerol-3-phosphate dehy N/A N/A 0.632 0.863 0.781 1e-138
Q27567350 Glycerol-3-phosphate dehy N/A N/A 0.632 0.888 0.778 1e-137
O35077349 Glycerol-3-phosphate dehy yes N/A 0.630 0.888 0.682 1e-120
Q5EA88349 Glycerol-3-phosphate dehy yes N/A 0.630 0.888 0.679 1e-120
P13707349 Glycerol-3-phosphate dehy yes N/A 0.630 0.888 0.679 1e-120
Q5RCE0349 Glycerol-3-phosphate dehy yes N/A 0.630 0.888 0.676 1e-120
>sp|Q27928|GPDA_DROPS Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Drosophila pseudoobscura pseudoobscura GN=Gpdh PE=3 SV=2 Back     alignment and function desciption
 Score =  493 bits (1269), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/311 (78%), Positives = 275/311 (88%)

Query: 1   MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQF 60
           M+VYEEMIDGKKLTEIINETHENVKYL GHKLPPNVVAVPD+VEAAK+ADIL+FVVPHQF
Sbjct: 39  MFVYEEMIDGKKLTEIINETHENVKYLKGHKLPPNVVAVPDLVEAAKNADILIFVVPHQF 98

Query: 61  IVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEV 120
           I   C QLLGKIKP+A+ +SLIKGFD+AEGGGIDLISHIITR+LKI   VLMGANLA EV
Sbjct: 99  IPNFCKQLLGKIKPNAIAISLIKGFDKAEGGGIDLISHIITRHLKIPCAVLMGANLANEV 158

Query: 121 AEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDG 180
           AE  FCETTIGC DK  G +L  L Q  +FRV VVDD DAVE+CGALKNIVACGAGFVDG
Sbjct: 159 AEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVDDADAVEVCGALKNIVACGAGFVDG 218

Query: 181 LGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAF 240
           L LGDNTKAAVIRLGLMEM++F ++FYPG+K +TFFESCGVADLITTCYGGRNR+VSEAF
Sbjct: 219 LKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVSEAF 278

Query: 241 VKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQ 300
           V +GK+I++LE EMLNGQKLQGP TA+EVNYMLKNK +E+KFPLFTA+HKIC  ++KP+ 
Sbjct: 279 VTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKKLEDKFPLFTAIHKICTNQLKPKD 338

Query: 301 FIDAIREHPDH 311
            ID IR HP+H
Sbjct: 339 LIDCIRNHPEH 349

Drosophila pseudoobscura pseudoobscura (taxid: 46245)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 8
>sp|P07735|GPDA_DROVI Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Drosophila virilis GN=Gpdh PE=1 SV=3 Back     alignment and function description
>sp|Q27556|GPDA_DROAE Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Drosophila americana GN=Gpdh PE=3 SV=4 Back     alignment and function description
>sp|P13706|GPDA_DROME Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Drosophila melanogaster GN=Gpdh PE=1 SV=3 Back     alignment and function description
>sp|O97463|GPDA_DROKA Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Drosophila kanekoi GN=Gpdh1 PE=3 SV=3 Back     alignment and function description
>sp|Q27567|GPDA_DROEZ Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Drosophila ezoana GN=Gpdh1 PE=3 SV=4 Back     alignment and function description
>sp|O35077|GPDA_RAT Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus GN=Gpd1 PE=1 SV=4 Back     alignment and function description
>sp|Q5EA88|GPDA_BOVIN Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Bos taurus GN=GPD1 PE=2 SV=3 Back     alignment and function description
>sp|P13707|GPDA_MOUSE Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Mus musculus GN=Gpd1 PE=1 SV=3 Back     alignment and function description
>sp|Q5RCE0|GPDA_PONAB Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Pongo abelii GN=GPD1 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
156549032369 PREDICTED: glycerol-3-phosphate dehydrog 0.640 0.853 0.774 1e-145
91076880354 PREDICTED: similar to glycerol-3-phospha 0.636 0.884 0.833 1e-145
332376853364 unknown [Dendroctonus ponderosae] 0.640 0.865 0.815 1e-144
307213912482 Glycerol-3-phosphate dehydrogenase [NAD+ 0.646 0.659 0.789 1e-143
157120299356 glycerol-3-phosphate dehydrogenase [Aede 0.644 0.890 0.810 1e-143
157120297359 glycerol-3-phosphate dehydrogenase [Aede 0.632 0.866 0.823 1e-143
157120301350 glycerol-3-phosphate dehydrogenase [Aede 0.632 0.888 0.823 1e-143
332024225335 Glycerol-3-phosphate dehydrogenase [NAD+ 0.632 0.928 0.800 1e-142
158285382354 AGAP007593-PA [Anopheles gambiae str. PE 0.632 0.878 0.816 1e-142
58378155350 AGAP007593-PB [Anopheles gambiae str. PE 0.632 0.888 0.816 1e-142
>gi|156549032|ref|XP_001607937.1| PREDICTED: glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 244/315 (77%), Positives = 279/315 (88%)

Query: 1   MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQF 60
           MYVYEEM+DG+KLTEIINETHENVKYLPGHK+P NV+AVPDVVEAAKDADIL+FVVPHQF
Sbjct: 39  MYVYEEMVDGRKLTEIINETHENVKYLPGHKIPENVIAVPDVVEAAKDADILIFVVPHQF 98

Query: 61  IVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEV 120
           I R+CS LLGKIKP+A+GLSL+KGFD  EGGGI+LISHII R L I ++VLMGANLA EV
Sbjct: 99  IRRICSTLLGKIKPNAIGLSLVKGFDIKEGGGIELISHIIARELHIPVSVLMGANLASEV 158

Query: 121 AEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDG 180
           A+E FCETTIGCKDK   P+L  L+QT  FRV VV+D D+VE CGALKNIVACGAGFVDG
Sbjct: 159 ADEMFCETTIGCKDKVKAPILRELIQTSYFRVVVVEDADSVECCGALKNIVACGAGFVDG 218

Query: 181 LGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAF 240
           +GLGDNTKAAVIRLGLMEM+KF ++F+PG K ATFFESCGVADLITTCYGGRNRKVSEAF
Sbjct: 219 MGLGDNTKAAVIRLGLMEMIKFVDVFFPGGKLATFFESCGVADLITTCYGGRNRKVSEAF 278

Query: 241 VKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQ 300
           ++TGK+I++LE EMLNGQKLQGP TA+EVNYMLKNK ME++FPLFTA+H+IC+GE+K   
Sbjct: 279 IQTGKTIEELEREMLNGQKLQGPITAEEVNYMLKNKGMESRFPLFTAIHRICVGELKATD 338

Query: 301 FIDAIREHPDHKVST 315
            ID IR HP+H   T
Sbjct: 339 LIDCIRNHPEHMEDT 353

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom:

>gi|91076880|ref|XP_975007.1| PREDICTED: similar to glycerol-3-phosphate dehydrogenase [Tribolium castaneum] gi|270001802|gb|EEZ98249.1| hypothetical protein TcasGA2_TC000688 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332376853|gb|AEE63566.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|307213912|gb|EFN89159.1| Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|157120299|ref|XP_001653595.1| glycerol-3-phosphate dehydrogenase [Aedes aegypti] gi|108883108|gb|EAT47333.1| AAEL001593-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|157120297|ref|XP_001653594.1| glycerol-3-phosphate dehydrogenase [Aedes aegypti] gi|108883107|gb|EAT47332.1| AAEL001593-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|157120301|ref|XP_001653596.1| glycerol-3-phosphate dehydrogenase [Aedes aegypti] gi|108883109|gb|EAT47334.1| AAEL001593-PC [Aedes aegypti] Back     alignment and taxonomy information
>gi|332024225|gb|EGI64429.1| Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|158285382|ref|XP_001687881.1| AGAP007593-PA [Anopheles gambiae str. PEST] gi|157019965|gb|EDO64530.1| AGAP007593-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|58378155|ref|XP_308279.2| AGAP007593-PB [Anopheles gambiae str. PEST] gi|55245320|gb|EAA03917.3| AGAP007593-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
FB|FBgn0001128363 Gpdh "Glycerol 3 phosphate deh 0.632 0.856 0.781 3.4e-132
UNIPROTKB|F1P976349 GPD1 "Uncharacterized protein" 0.628 0.885 0.686 1.2e-111
ZFIN|ZDB-GENE-030131-3906380 gpd1b "glycerol-3-phosphate de 0.628 0.813 0.681 4.2e-111
RGD|621381349 Gpd1 "glycerol-3-phosphate deh 0.628 0.885 0.686 1.1e-110
MGI|MGI:95679349 Gpd1 "glycerol-3-phosphate deh 0.628 0.885 0.683 2.9e-110
UNIPROTKB|Q5EA88349 GPD1 "Glycerol-3-phosphate deh 0.628 0.885 0.683 2.9e-110
UNIPROTKB|P21695349 GPD1 "Glycerol-3-phosphate deh 0.628 0.885 0.680 3.8e-110
ZFIN|ZDB-GENE-050417-209351 gpd1a "glycerol-3-phosphate de 0.628 0.880 0.677 8.1e-108
UNIPROTKB|F1NFY2352 GPD1 "Uncharacterized protein" 0.628 0.877 0.664 1.3e-107
ZFIN|ZDB-GENE-040426-2576349 gpd1c "glycerol-3-phosphate de 0.628 0.885 0.658 1.7e-105
FB|FBgn0001128 Gpdh "Glycerol 3 phosphate dehydrogenase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1296 (461.3 bits), Expect = 3.4e-132, P = 3.4e-132
 Identities = 243/311 (78%), Positives = 274/311 (88%)

Query:     1 MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQF 60
             M+VYEE+IDGKKLTEIINETHENVKYL GHKLPPNVVAVPD+VEAAK+ADIL+FVVPHQF
Sbjct:    39 MFVYEELIDGKKLTEIINETHENVKYLKGHKLPPNVVAVPDLVEAAKNADILIFVVPHQF 98

Query:    61 IVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEV 120
             I   C QLLGKIKP+A+ +SLIKGFD+AEGGGIDLISHIITR+LKI   VLMGANLA EV
Sbjct:    99 IPNFCKQLLGKIKPNAIAISLIKGFDKAEGGGIDLISHIITRHLKIPCAVLMGANLANEV 158

Query:   121 AEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDG 180
             AE  FCETTIGC DK  G +L  L Q  +FRV VVDD DAVE+CGALKNIVACGAGFVDG
Sbjct:   159 AEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVDDADAVEVCGALKNIVACGAGFVDG 218

Query:   181 LGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKVSEAF 240
             L LGDNTKAAVIRLGLMEM++F ++FYPG+K +TFFESCGVADLITTCYGGRNR+VSEAF
Sbjct:   219 LKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVSEAF 278

Query:   241 VKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQ 300
             V +GK+I++LE EMLNGQKLQGP TA+EVNYMLKNK +E+KFPLFTA+HKIC  ++KP  
Sbjct:   279 VTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLFTAIHKICTNQLKPND 338

Query:   301 FIDAIREHPDH 311
              ID IR HP+H
Sbjct:   339 LIDCIRNHPEH 349
GO:0004367 "glycerol-3-phosphate dehydrogenase [NAD+
GO:0006072 "glycerol-3-phosphate metabolic process" evidence=ISS
GO:0005737 "cytoplasm" evidence=NAS
GO:0006127 "glycerophosphate shuttle" evidence=NAS
GO:0031430 "M band" evidence=IDA
GO:0030018 "Z disc" evidence=IDA
GO:0046168 "glycerol-3-phosphate catabolic process" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009331 "glycerol-3-phosphate dehydrogenase complex" evidence=IEA
GO:0051287 "NAD binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0042803 "protein homodimerization activity" evidence=IEA
GO:0007629 "flight behavior" evidence=IMP
GO:0006641 "triglyceride metabolic process" evidence=IMP
GO:0005811 "lipid particle" evidence=IDA
UNIPROTKB|F1P976 GPD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3906 gpd1b "glycerol-3-phosphate dehydrogenase 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|621381 Gpd1 "glycerol-3-phosphate dehydrogenase 1 (soluble)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:95679 Gpd1 "glycerol-3-phosphate dehydrogenase 1 (soluble)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5EA88 GPD1 "Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P21695 GPD1 "Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-209 gpd1a "glycerol-3-phosphate dehydrogenase 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NFY2 GPD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2576 gpd1c "glycerol-3-phosphate dehydrogenase 1c" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5RCE0GPDA_PONAB1, ., 1, ., 1, ., 80.67620.63000.8882yesN/A
P34517GPDH2_CAEEL1, ., 1, ., 1, ., 80.61370.63210.7933yesN/A
Q27567GPDA_DROEZ1, ., 1, ., 1, ., 80.77810.63210.8885N/AN/A
Q5EA88GPDA_BOVIN1, ., 1, ., 1, ., 80.67940.63000.8882yesN/A
Q9HGY1GPD2_ZYGRO1, ., 1, ., 1, ., 80.47310.62190.7866yesN/A
Q9HGY2GPD1_ZYGRO1, ., 1, ., 1, ., 80.46370.62190.7630yesN/A
P08507GPDA_RABIT1, ., 1, ., 1, ., 80.65060.63000.8882yesN/A
Q27556GPDA_DROAE1, ., 1, ., 1, ., 80.77810.63210.8885N/AN/A
Q9UVF4GPD1_YARLI1, ., 1, ., 1, ., 80.47570.60160.7437yesN/A
Q00055GPD1_YEAST1, ., 1, ., 1, ., 80.45960.63210.7953yesN/A
Q759G5GPD_ASHGO1, ., 1, ., 1, ., 80.50830.58940.6839yesN/A
Q6FN96GPD1_CANGA1, ., 1, ., 1, ., 80.47630.62190.765yesN/A
Q9SCX9GPDA1_ARATH1, ., 1, ., 1, ., 80.51790.61380.755yesN/A
Q27928GPDA_DROPS1, ., 1, ., 1, ., 80.78450.63210.8638yesN/A
O97463GPDA_DROKA1, ., 1, ., 1, ., 80.78130.63210.8638N/AN/A
P21696GPD1_SCHPO1, ., 1, ., 1, ., 80.52250.61170.7818yesN/A
O35077GPDA_RAT1, ., 1, ., 1, ., 80.68260.63000.8882yesN/A
P21695GPDA_HUMAN1, ., 1, ., 1, ., 80.67620.63000.8882yesN/A
P07735GPDA_DROVI1, ., 1, ., 1, ., 80.78130.63210.8810N/AN/A
P13707GPDA_MOUSE1, ., 1, ., 1, ., 80.67940.63000.8882yesN/A
P13706GPDA_DROME1, ., 1, ., 1, ., 80.78130.63210.8567yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.1.10.921
4th Layer1.1.1.80.914

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
TIGR03376342 TIGR03376, glycerol3P_DH, glycerol-3-phosphate deh 1e-171
PTZ00345365 PTZ00345, PTZ00345, glycerol-3-phosphate dehydroge 1e-130
COG0240329 COG0240, GpsA, Glycerol-3-phosphate dehydrogenase 1e-94
TIGR03376342 TIGR03376, glycerol3P_DH, glycerol-3-phosphate deh 2e-84
PRK00094325 PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosp 2e-66
pfam07479145 pfam07479, NAD_Gly3P_dh_C, NAD-dependent glycerol- 1e-64
PTZ00345365 PTZ00345, PTZ00345, glycerol-3-phosphate dehydroge 5e-64
pfam07479145 pfam07479, NAD_Gly3P_dh_C, NAD-dependent glycerol- 1e-53
COG0240329 COG0240, GpsA, Glycerol-3-phosphate dehydrogenase 3e-45
pfam01210157 pfam01210, NAD_Gly3P_dh_N, NAD-dependent glycerol- 3e-43
PRK14618328 PRK14618, PRK14618, NAD(P)H-dependent glycerol-3-p 2e-38
PRK12439341 PRK12439, PRK12439, NAD(P)H-dependent glycerol-3-p 3e-37
PRK00094325 PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosp 2e-33
PRK14620326 PRK14620, PRK14620, NAD(P)H-dependent glycerol-3-p 3e-23
PRK14618328 PRK14618, PRK14618, NAD(P)H-dependent glycerol-3-p 2e-22
PRK14619308 PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-p 2e-21
PRK12439341 PRK12439, PRK12439, NAD(P)H-dependent glycerol-3-p 4e-20
PRK14619308 PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-p 1e-16
PRK14620326 PRK14620, PRK14620, NAD(P)H-dependent glycerol-3-p 1e-10
>gnl|CDD|234190 TIGR03376, glycerol3P_DH, glycerol-3-phosphate dehydrogenase (NAD(+)) Back     alignment and domain information 
 Score =  485 bits (1250), Expect = e-171
 Identities = 182/309 (58%), Positives = 227/309 (73%), Gaps = 5/309 (1%)

Query: 1   MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQF 60
           M+V+EE I+G+ LTEIIN THENVKYLPG KLP N+VAVPD+VEAAK ADILVFV+PHQF
Sbjct: 35  MWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEAAKGADILVFVIPHQF 94

Query: 61  IVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEV 120
           +  +C QL G +KP+A  +S IKG + ++ G + L+S II   L I   VL GANLA EV
Sbjct: 95  LEGICKQLKGHVKPNARAISCIKGLEVSKDG-VKLLSDIIEEELGIPCGVLSGANLANEV 153

Query: 121 AEEKFCETTIGCKD----KTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAG 176
           A+EKF ETT+G +D         +L AL   P FRV+VVDDV  VEI GALKN+VA  AG
Sbjct: 154 AKEKFSETTVGYRDPADFDVDARVLKALFHRPYFRVNVVDDVAGVEIAGALKNVVAIAAG 213

Query: 177 FVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYGGRNRKV 236
           FVDGLG GDN KAAV+R GL+EM+KF  +F+P  +    FESCGVADLITTC GGRN KV
Sbjct: 214 FVDGLGWGDNAKAAVMRRGLLEMIKFARMFFPTGEVTFTFESCGVADLITTCLGGRNFKV 273

Query: 237 SEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEM 296
             AF KTGKS+++LE E+LNGQ LQG  TA EV+ +LKNKN +++FPLF AV++I    +
Sbjct: 274 GRAFAKTGKSLEELEKELLNGQSLQGVATAKEVHELLKNKNKDDEFPLFEAVYQILYEGL 333

Query: 297 KPQQFIDAI 305
            P++  + +
Sbjct: 334 PPKKLPECL 342

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria. Length = 342
>gnl|CDD|240373 PTZ00345, PTZ00345, glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|223318 COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|234190 TIGR03376, glycerol3P_DH, glycerol-3-phosphate dehydrogenase (NAD(+)) Back     alignment and domain information
>gnl|CDD|234629 PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|116100 pfam07479, NAD_Gly3P_dh_C, NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Back     alignment and domain information
>gnl|CDD|240373 PTZ00345, PTZ00345, glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|116100 pfam07479, NAD_Gly3P_dh_C, NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Back     alignment and domain information
>gnl|CDD|223318 COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|201664 pfam01210, NAD_Gly3P_dh_N, NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Back     alignment and domain information
>gnl|CDD|237770 PRK14618, PRK14618, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|171500 PRK12439, PRK12439, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|234629 PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|173083 PRK14620, PRK14620, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|237770 PRK14618, PRK14618, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|237771 PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|171500 PRK12439, PRK12439, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|237771 PRK14619, PRK14619, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|173083 PRK14620, PRK14620, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 492
COG0240329 GpsA Glycerol-3-phosphate dehydrogenase [Energy pr 100.0
PTZ00345365 glycerol-3-phosphate dehydrogenase; Provisional 100.0
TIGR03376342 glycerol3P_DH glycerol-3-phosphate dehydrogenase ( 100.0
KOG2711|consensus372 100.0
PRK12439341 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 100.0
COG0240329 GpsA Glycerol-3-phosphate dehydrogenase [Energy pr 100.0
PRK14620326 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 100.0
PTZ00345365 glycerol-3-phosphate dehydrogenase; Provisional 100.0
TIGR03376342 glycerol3P_DH glycerol-3-phosphate dehydrogenase ( 100.0
KOG2711|consensus372 100.0
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 100.0
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 100.0
PRK12439341 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 100.0
PF07479149 NAD_Gly3P_dh_C: NAD-dependent glycerol-3-phosphate 100.0
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 100.0
PF07479149 NAD_Gly3P_dh_C: NAD-dependent glycerol-3-phosphate 100.0
PRK14620326 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 99.97
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 99.97
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 99.94
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 99.94
COG1004414 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en 99.87
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 99.84
TIGR03026411 NDP-sugDHase nucleotide sugar dehydrogenase. All o 99.63
PLN02353473 probable UDP-glucose 6-dehydrogenase 99.55
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 99.4
PRK07634245 pyrroline-5-carboxylate reductase; Reviewed 99.38
PRK15057388 UDP-glucose 6-dehydrogenase; Provisional 99.37
KOG2666|consensus481 99.29
PRK08229341 2-dehydropantoate 2-reductase; Provisional 99.25
TIGR00745293 apbA_panE 2-dehydropantoate 2-reductase. This mode 99.18
PRK12491272 pyrroline-5-carboxylate reductase; Reviewed 99.17
COG0345266 ProC Pyrroline-5-carboxylate reductase [Amino acid 99.15
PRK12921305 2-dehydropantoate 2-reductase; Provisional 99.12
PRK15182425 Vi polysaccharide biosynthesis protein TviB; Provi 99.12
TIGR00112245 proC pyrroline-5-carboxylate reductase. This enzym 99.09
PRK11064415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 99.07
PRK06928277 pyrroline-5-carboxylate reductase; Reviewed 98.99
PRK07679279 pyrroline-5-carboxylate reductase; Reviewed 98.92
PTZ00431260 pyrroline carboxylate reductase; Provisional 98.89
TIGR01692288 HIBADH 3-hydroxyisobutyrate dehydrogenase. This en 98.86
TIGR01505291 tartro_sem_red 2-hydroxy-3-oxopropionate reductase 98.73
PRK12557342 H(2)-dependent methylenetetrahydromethanopterin de 98.66
PRK11880267 pyrroline-5-carboxylate reductase; Reviewed 98.64
PRK07680273 late competence protein ComER; Validated 98.62
TIGR01915219 npdG NADPH-dependent F420 reductase. This model re 98.61
PLN02688266 pyrroline-5-carboxylate reductase 98.58
PRK11559296 garR tartronate semialdehyde reductase; Provisiona 98.55
PRK06476258 pyrroline-5-carboxylate reductase; Reviewed 98.45
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 98.44
PRK15461296 NADH-dependent gamma-hydroxybutyrate dehydrogenase 98.38
COG0677436 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas 98.37
TIGR00465314 ilvC ketol-acid reductoisomerase. This is the seco 98.34
PRK06249313 2-dehydropantoate 2-reductase; Provisional 98.2
PRK05479330 ketol-acid reductoisomerase; Provisional 98.1
PRK05708305 2-dehydropantoate 2-reductase; Provisional 97.98
PRK15059292 tartronate semialdehyde reductase; Provisional 97.92
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 97.9
COG1893307 ApbA Ketopantoate reductase [Coenzyme metabolism] 97.86
KOG3124|consensus267 97.86
PRK07531495 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe 97.84
TIGR00872298 gnd_rel 6-phosphogluconate dehydrogenase (decarbox 97.77
PTZ00142470 6-phosphogluconate dehydrogenase; Provisional 97.75
COG2084286 MmsB 3-hydroxyisobutyrate dehydrogenase and relate 97.68
PLN02858 1378 fructose-bisphosphate aldolase 97.66
PRK08655437 prephenate dehydrogenase; Provisional 97.66
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 97.59
PF0380796 F420_oxidored: NADP oxidoreductase coenzyme F420-d 97.5
PLN02256304 arogenate dehydrogenase 97.49
PRK12490299 6-phosphogluconate dehydrogenase-like protein; Rev 97.47
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 97.45
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 97.43
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 97.41
PRK09599301 6-phosphogluconate dehydrogenase-like protein; Rev 97.4
PRK08507275 prephenate dehydrogenase; Validated 97.32
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 97.09
PRK06545359 prephenate dehydrogenase; Validated 97.09
PF0098496 UDPG_MGDP_dh: UDP-glucose/GDP-mannose dehydrogenas 96.98
PLN02858 1378 fructose-bisphosphate aldolase 96.86
PRK14806 735 bifunctional cyclohexadienyl dehydrogenase/ 3-phos 96.79
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 96.73
TIGR00873467 gnd 6-phosphogluconate dehydrogenase, decarboxylat 96.62
COG2085211 Predicted dinucleotide-binding enzymes [General fu 96.6
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 96.57
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 96.45
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 96.32
PRK07502307 cyclohexadienyl dehydrogenase; Validated 96.25
PF02153258 PDH: Prephenate dehydrogenase; InterPro: IPR003099 96.23
PLN02350493 phosphogluconate dehydrogenase (decarboxylating) 96.12
PRK08269314 3-hydroxybutyryl-CoA dehydrogenase; Validated 95.61
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 95.45
PRK07417279 arogenate dehydrogenase; Reviewed 95.08
PLN02712667 arogenate dehydrogenase 94.96
PRK09287459 6-phosphogluconate dehydrogenase; Validated 94.81
PRK11199374 tyrA bifunctional chorismate mutase/prephenate deh 94.78
PF10727127 Rossmann-like: Rossmann-like domain; InterPro: IPR 94.34
KOG0409|consensus327 93.94
PF01113124 DapB_N: Dihydrodipicolinate reductase, N-terminus; 93.74
PRK08818370 prephenate dehydrogenase; Provisional 93.48
PF02558151 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: 93.36
PLN02712 667 arogenate dehydrogenase 93.3
COG0287279 TyrA Prephenate dehydrogenase [Amino acid transpor 92.65
PRK08605332 D-lactate dehydrogenase; Validated 91.82
TIGR00745293 apbA_panE 2-dehydropantoate 2-reductase. This mode 91.72
TIGR00036266 dapB dihydrodipicolinate reductase. 91.56
TIGR02279503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 91.2
PRK12480330 D-lactate dehydrogenase; Provisional 90.96
PRK08229341 2-dehydropantoate 2-reductase; Provisional 89.93
TIGR01724341 hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome 89.62
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.89
TIGR03026 411 NDP-sugDHase nucleotide sugar dehydrogenase. All o 88.06
cd05297423 GH4_alpha_glucosidase_galactosidase Glycoside Hydr 87.75
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 87.64
PF07991165 IlvN: Acetohydroxy acid isomeroreductase, catalyti 85.24
PRK08268507 3-hydroxy-acyl-CoA dehydrogenase; Validated 84.67
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 83.99
PRK06444197 prephenate dehydrogenase; Provisional 83.87
PRK12921305 2-dehydropantoate 2-reductase; Provisional 83.09
PRK00048257 dihydrodipicolinate reductase; Provisional 81.17
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-83  Score=639.93  Aligned_cols=295  Identities=38%  Similarity=0.545  Sum_probs=287.3

Q ss_pred             CcccccccCcHHHHHHHHHcCCCCCCCCCCCCCCCeEEecCHHHHhccCCEEEEecChHHHHHHHHHhhccCCCCCeEEE
Q psy14065          1 MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLS   80 (492)
Q Consensus         1 ~~~~~~~~~~~~~~~~in~~~~N~~ylp~i~l~~~I~at~dl~~al~~aDiIilaVPs~~~~~vl~~l~~~l~~~~~iIs   80 (492)
                      ||+||++     +++.||++|+|++|||++.+|+++++|+|+.++++++|+|+++|||++++++++++++++++++++|+
T Consensus        29 lw~r~~~-----~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avPs~~~r~v~~~l~~~l~~~~~iv~  103 (329)
T COG0240          29 LWGRDEE-----IVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVPSQALREVLRQLKPLLLKDAIIVS  103 (329)
T ss_pred             EEecCHH-----HHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECChHHHHHHHHHHhhhccCCCeEEE
Confidence            6999988     58999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccceeccCCccccHHHHHHhHhC-CceEEEeCcChHHHHhhcCCceEEEeecCcchHHHHHHHhcCCCceEEEcCCcc
Q psy14065         81 LIKGFDRAEGGGIDLISHIITRNLK-IKMTVLMGANLAGEVAEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVD  159 (492)
Q Consensus        81 ~~KGl~~~~~~t~~~~se~i~e~l~-~~~~vlsGPn~A~Ev~~~~pt~vvias~~~~~~~~v~~lf~~~~f~v~~~~D~~  159 (492)
                      ++|||++   +|.+++||++++.++ .++++|||||||.||++++||+++++|.|++.++++|++|++++||||+++|++
T Consensus       104 ~sKGie~---~t~~l~seii~e~l~~~~~~vLSGPs~A~EVa~g~pta~~vas~d~~~a~~v~~~f~~~~Frvy~~~Dv~  180 (329)
T COG0240         104 ATKGLEP---ETGRLLSEIIEEELPDNPIAVLSGPSFAKEVAQGLPTAVVVASNDQEAAEKVQALFSSPYFRVYTSTDVI  180 (329)
T ss_pred             EeccccC---CCcchHHHHHHHHcCCCeEEEEECccHHHHHhcCCCcEEEEecCCHHHHHHHHHHhCCCcEEEEecCchh
Confidence            9999998   799999999999998 459999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHHHHHHhhhcCCCcChHHHHHHHHHHHHHHHHHHHCCCCCccccccccccchhhhhccC--CCCHHHH
Q psy14065        160 AVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYG--GRNRKVS  237 (492)
Q Consensus       160 GvEl~galKNv~AIa~Gi~~gl~~g~N~~aal~t~g~~Em~~l~~~~~~G~~~~t~~glaGlGDl~~Tc~s--~RN~~~G  237 (492)
                      |||++|||||||||||||+||+++|+|+++||+|||++||.||+.+|  |++|+||+||+|+|||++||+|  |||||||
T Consensus       181 GveigGAlKNViAIA~Gi~dGlg~G~NakaalitrGL~Em~rlg~~l--G~~~~T~~gLsGlGDLilTCts~~SRN~r~G  258 (329)
T COG0240         181 GVEIGGALKNVIAIAAGIADGLGLGDNAKAALITRGLAEMTRLGVAL--GAKPETFMGLSGLGDLILTCTSPLSRNRRFG  258 (329)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHhHHHHHHHHHHHh--CCCcchhcccccccceeEecCCCccccHHHH
Confidence            99999999999999999999999999999999999999999999999  9999999999999999999999  8999999


Q ss_pred             HHHHhCCCChHHHHHHhcCCceeecchhHHHHHHHHHhcCCCCCCchhhhhHHhhcCCCChHHHHHHHhcCCC
Q psy14065        238 EAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPD  310 (492)
Q Consensus       238 ~~l~~~G~~~~~~~~~~~~g~~~EG~~t~~~v~~l~~~~~l~~~~PI~~av~~Il~~~~~p~~~i~~L~~~~~  310 (492)
                      ..|+| |.+.++++.++  |+++||++|++.++++++++++  +|||+++||+|++++++|+++++.||.|+.
T Consensus       259 ~~lg~-g~~~~e~l~~~--g~vvEGv~t~k~v~~la~~~~i--~mPI~~~Vy~vl~~~~~~~~~~~~L~~r~~  326 (329)
T COG0240         259 LLLGQ-GLSLDEALEEI--GQVVEGVRTAKAVYELAKKLGI--EMPITEAVYRVLYEGLDPKEAIEELMGRDL  326 (329)
T ss_pred             HHHhC-CCCHHHHHHhc--CCeeecHHHHHHHHHHHHHcCC--CCCHHHHHHHHHhCCCCHHHHHHHHhcccc
Confidence            99997 89999999988  9999999999999999999998  599999999999999999999999998874

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)) Back     alignment and domain information
>KOG2711|consensus Back     alignment and domain information
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)) Back     alignment and domain information
>KOG2711|consensus Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PF07479 NAD_Gly3P_dh_C: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; InterPro: IPR006109 NAD-dependent glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>PF07479 NAD_Gly3P_dh_C: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; InterPro: IPR006109 NAD-dependent glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase Back     alignment and domain information
>PLN02353 probable UDP-glucose 6-dehydrogenase Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional Back     alignment and domain information
>KOG2666|consensus Back     alignment and domain information
>PRK08229 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase Back     alignment and domain information
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional Back     alignment and domain information
>TIGR00112 proC pyrroline-5-carboxylate reductase Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PTZ00431 pyrroline carboxylate reductase; Provisional Back     alignment and domain information
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase Back     alignment and domain information
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase Back     alignment and domain information
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional Back     alignment and domain information
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PRK07680 late competence protein ComER; Validated Back     alignment and domain information
>TIGR01915 npdG NADPH-dependent F420 reductase Back     alignment and domain information
>PLN02688 pyrroline-5-carboxylate reductase Back     alignment and domain information
>PRK11559 garR tartronate semialdehyde reductase; Provisional Back     alignment and domain information
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional Back     alignment and domain information
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR00465 ilvC ketol-acid reductoisomerase Back     alignment and domain information
>PRK06249 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK05479 ketol-acid reductoisomerase; Provisional Back     alignment and domain information
>PRK05708 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK15059 tartronate semialdehyde reductase; Provisional Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] Back     alignment and domain information
>KOG3124|consensus Back     alignment and domain information
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated Back     alignment and domain information
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) Back     alignment and domain information
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional Back     alignment and domain information
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] Back     alignment and domain information
>PLN02858 fructose-bisphosphate aldolase Back     alignment and domain information
>PRK08655 prephenate dehydrogenase; Provisional Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain Back     alignment and domain information
>PLN02256 arogenate dehydrogenase Back     alignment and domain information
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed Back     alignment and domain information
>PRK08507 prephenate dehydrogenase; Validated Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06545 prephenate dehydrogenase; Validated Back     alignment and domain information
>PF00984 UDPG_MGDP_dh: UDP-glucose/GDP-mannose dehydrogenase family, central domain; InterPro: IPR014026 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PLN02858 fructose-bisphosphate aldolase Back     alignment and domain information
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating Back     alignment and domain information
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07502 cyclohexadienyl dehydrogenase; Validated Back     alignment and domain information
>PF02153 PDH: Prephenate dehydrogenase; InterPro: IPR003099 Members of this family are prephenate dehydrogenases 1 Back     alignment and domain information
>PLN02350 phosphogluconate dehydrogenase (decarboxylating) Back     alignment and domain information
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PRK07417 arogenate dehydrogenase; Reviewed Back     alignment and domain information
>PLN02712 arogenate dehydrogenase Back     alignment and domain information
>PRK09287 6-phosphogluconate dehydrogenase; Validated Back     alignment and domain information
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional Back     alignment and domain information
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins Back     alignment and domain information
>KOG0409|consensus Back     alignment and domain information
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] Back     alignment and domain information
>PRK08818 prephenate dehydrogenase; Provisional Back     alignment and domain information
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 Back     alignment and domain information
>PLN02712 arogenate dehydrogenase Back     alignment and domain information
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08605 D-lactate dehydrogenase; Validated Back     alignment and domain information
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase Back     alignment and domain information
>TIGR00036 dapB dihydrodipicolinate reductase Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>PRK12480 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>PRK08229 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase Back     alignment and domain information
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06444 prephenate dehydrogenase; Provisional Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK00048 dihydrodipicolinate reductase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
1x0x_A354 Co-Structure Of Homo Sapiens Glycerol-3-Phosphate D 1e-120
1x0x_A354 Co-Structure Of Homo Sapiens Glycerol-3-Phosphate D 2e-64
1wpq_A349 Ternary Complex Of Glycerol 3-Phosphate Dehydrogena 1e-120
1wpq_A349 Ternary Complex Of Glycerol 3-Phosphate Dehydrogena 1e-64
1x0v_A354 Crystal Structure Of Homo Sapien Glycerol-3-Phospha 1e-116
1x0v_A354 Crystal Structure Of Homo Sapien Glycerol-3-Phospha 3e-62
2pla_A349 Crystal Structure Of Human Glycerol-3-Phosphate Deh 1e-110
2pla_A349 Crystal Structure Of Human Glycerol-3-Phosphate Deh 2e-60
4fgw_A391 Structure Of Glycerol-3-phosphate Dehydrogenase, Gp 4e-76
4fgw_A391 Structure Of Glycerol-3-phosphate Dehydrogenase, Gp 1e-35
1yj8_A375 Initial Structural Analysis Of Plasmodium Falciparu 9e-63
1yj8_A375 Initial Structural Analysis Of Plasmodium Falciparu 2e-33
3k96_A356 2.1 Angstrom Resolution Crystal Structure Of Glycer 2e-26
3k96_A356 2.1 Angstrom Resolution Crystal Structure Of Glycer 4e-16
1z82_A335 Crystal Structure Of Glycerol-3-Phosphate Dehydroge 6e-24
1z82_A335 Crystal Structure Of Glycerol-3-Phosphate Dehydroge 2e-16
1evy_A366 Crystal Structure Of Leishmania Mexicana Glycerol-3 2e-20
1evy_A366 Crystal Structure Of Leishmania Mexicana Glycerol-3 5e-08
1txg_A335 Structure Of Glycerol-3-Phosphate Dehydrogenase Fro 7e-07
1txg_A335 Structure Of Glycerol-3-Phosphate Dehydrogenase Fro 5e-05
>pdb|1X0X|A Chain A, Co-Structure Of Homo Sapiens Glycerol-3-Phosphate Dehydrogenase 1 Complex With Nad Length = 354 Back     alignment and structure 
Iteration: 1

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/312 (67%), Positives = 249/312 (79%), Gaps = 2/312 (0%)
Query: 1   MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQF 60
           M+V+EE I GKKLTEIIN  HENVKYLPGHKLPPNVVAVPDVV+AA+DADIL+FVVPHQF
Sbjct: 43  MWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQF 102
Query: 61  IVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEV 120
           I ++C QL G +K +A G+SLIKG D    G + LIS +I   L I M+VLMGAN+A EV
Sbjct: 103 IGKICDQLKGHLKANATGISLIKGVDEGPNG-LKLISEVIGERLGIPMSVLMGANIASEV 161
Query: 121 AEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDG 180
           A+EKFCETTIGCKD   G LL  L+QTPNFR++VV +VD VEICGALKN+VA GAGF DG
Sbjct: 162 ADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDG 221
Query: 181 LGLGDNTKAAVIRLGLMEMVKFTELFYPG-AKSATFFESCGVADLITTCYGGRNRKVSEA 239
           LG GDNTKAAVIRLGLMEM+ F +LF  G   SATF ESCGVADLITTCYGGRNRKV+EA
Sbjct: 222 LGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNRKVAEA 281
Query: 240 FVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQ 299
           F +TGKSI+ LE E+LNGQKLQGP TA E+  +L++K + +KFPLF AV+K+C       
Sbjct: 282 FARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVDKFPLFMAVYKVCYEGQPVG 341
Query: 300 QFIDAIREHPDH 311
           +FI  ++ HP+H
Sbjct: 342 EFIHCLQNHPEH 353
>pdb|1X0X|A Chain A, Co-Structure Of Homo Sapiens Glycerol-3-Phosphate Dehydrogenase 1 Complex With Nad Length = 354 Back     alignment and structure
>pdb|1WPQ|A Chain A, Ternary Complex Of Glycerol 3-Phosphate Dehydrogenase 1 With Nad And Dihydroxyactone Length = 349 Back     alignment and structure
>pdb|1WPQ|A Chain A, Ternary Complex Of Glycerol 3-Phosphate Dehydrogenase 1 With Nad And Dihydroxyactone Length = 349 Back     alignment and structure
>pdb|1X0V|A Chain A, Crystal Structure Of Homo Sapien Glycerol-3-Phosphate Dehydrogenase 1 Length = 354 Back     alignment and structure
>pdb|1X0V|A Chain A, Crystal Structure Of Homo Sapien Glycerol-3-Phosphate Dehydrogenase 1 Length = 354 Back     alignment and structure
>pdb|2PLA|A Chain A, Crystal Structure Of Human Glycerol-3-Phosphate Dehydrogenase 1-Like Protein Length = 349 Back     alignment and structure
>pdb|2PLA|A Chain A, Crystal Structure Of Human Glycerol-3-Phosphate Dehydrogenase 1-Like Protein Length = 349 Back     alignment and structure
>pdb|4FGW|A Chain A, Structure Of Glycerol-3-phosphate Dehydrogenase, Gpd1, From Sacharomyces Cerevisiae Length = 391 Back     alignment and structure
>pdb|4FGW|A Chain A, Structure Of Glycerol-3-phosphate Dehydrogenase, Gpd1, From Sacharomyces Cerevisiae Length = 391 Back     alignment and structure
>pdb|1YJ8|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum Glycerol-3- Phosphate Dehydrogenase Length = 375 Back     alignment and structure
>pdb|1YJ8|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum Glycerol-3- Phosphate Dehydrogenase Length = 375 Back     alignment and structure
>pdb|3K96|A Chain A, 2.1 Angstrom Resolution Crystal Structure Of Glycerol-3-Phosphate Dehydrogenase (Gpsa) From Coxiella Burnetii Length = 356 Back     alignment and structure
>pdb|3K96|A Chain A, 2.1 Angstrom Resolution Crystal Structure Of Glycerol-3-Phosphate Dehydrogenase (Gpsa) From Coxiella Burnetii Length = 356 Back     alignment and structure
>pdb|1Z82|A Chain A, Crystal Structure Of Glycerol-3-Phosphate Dehydrogenase (Tm0378) From Thermotoga Maritima At 2.00 A Resolution Length = 335 Back     alignment and structure
>pdb|1Z82|A Chain A, Crystal Structure Of Glycerol-3-Phosphate Dehydrogenase (Tm0378) From Thermotoga Maritima At 2.00 A Resolution Length = 335 Back     alignment and structure
>pdb|1EVY|A Chain A, Crystal Structure Of Leishmania Mexicana Glycerol-3-phosphate Dehydrogenase Length = 366 Back     alignment and structure
>pdb|1EVY|A Chain A, Crystal Structure Of Leishmania Mexicana Glycerol-3-phosphate Dehydrogenase Length = 366 Back     alignment and structure
>pdb|1TXG|A Chain A, Structure Of Glycerol-3-Phosphate Dehydrogenase From Archaeoglobus Fulgidus Length = 335 Back     alignment and structure
>pdb|1TXG|A Chain A, Structure Of Glycerol-3-Phosphate Dehydrogenase From Archaeoglobus Fulgidus Length = 335 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 1e-168
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 1e-84
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 1e-163
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 1e-82
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 2e-64
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 7e-32
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 5e-61
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 2e-30
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 2e-59
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 7e-31
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 7e-57
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 4e-30
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 4e-12
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
3c7a_A404 Octopine dehydrogenase; L) stereospecific opine de 3e-04
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Length = 354 Back     alignment and structure
 Score =  478 bits (1233), Expect = e-168
 Identities = 210/312 (67%), Positives = 248/312 (79%), Gaps = 2/312 (0%)

Query: 1   MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQF 60
           M+V+EE I GKKLTEIIN  HENVKYLPGHKLPPNVVAVPDVV+AA+DADIL+FVVPHQF
Sbjct: 43  MWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQF 102

Query: 61  IVRLCSQLLGKIKPDAVGLSLIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEV 120
           I ++C QL G +K +A G+SLIKG D    G + LIS +I   L I M+VLMGAN+A EV
Sbjct: 103 IGKICDQLKGHLKANATGISLIKGVDEGPNG-LKLISEVIGERLGIPMSVLMGANIASEV 161

Query: 121 AEEKFCETTIGCKDKTLGPLLHALLQTPNFRVSVVDDVDAVEICGALKNIVACGAGFVDG 180
           A+EKFCETTIGCKD   G LL  L+QTPNFR++VV +VD VEICGALKN+VA GAGF DG
Sbjct: 162 ADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDG 221

Query: 181 LGLGDNTKAAVIRLGLMEMVKFTELFYP-GAKSATFFESCGVADLITTCYGGRNRKVSEA 239
           LG GDNTKAAVIRLGLMEM+ F +LF      SATF ESCGVADLITTCYGGRNRKV+EA
Sbjct: 222 LGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNRKVAEA 281

Query: 240 FVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQ 299
           F +TGKSI+ LE E+LNGQKLQGP TA E+  +L++K + +KFPLF AV+K+C       
Sbjct: 282 FARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVDKFPLFMAVYKVCYEGQPVG 341

Query: 300 QFIDAIREHPDH 311
           +FI  ++ HP+H
Sbjct: 342 EFIHCLQNHPEH 353
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Length = 354 Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Length = 375 Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Length = 375 Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Length = 356 Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Length = 356 Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Length = 366 Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Length = 366 Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Length = 335 Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Length = 335 Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Length = 335 Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Length = 335 Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Length = 359 Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Length = 245 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* Length = 404 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
4fgw_A391 Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi 100.0
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 100.0
4fgw_A391 Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi 100.0
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 100.0
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 100.0
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 100.0
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 100.0
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 100.0
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 100.0
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 99.91
4a7p_A446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 99.9
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 99.88
3gg2_A450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 99.87
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 99.85
3hn2_A312 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str 99.85
3ghy_A335 Ketopantoate reductase protein; oxidoreductase, NA 99.85
3hwr_A318 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A 99.85
2y0c_A478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 99.82
3c7a_A404 Octopine dehydrogenase; L) stereospecific opine de 99.81
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 99.81
2ew2_A316 2-dehydropantoate 2-reductase, putative; alpha-str 99.81
1evy_A366 Glycerol-3-phosphate dehydrogenase; rossmann fold, 99.78
2qyt_A317 2-dehydropantoate 2-reductase; APC81190, porphyrom 99.71
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 99.68
1mv8_A436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 99.68
3g17_A294 Similar to 2-dehydropantoate 2-reductase; structur 99.63
3g79_A478 NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; 99.58
2o3j_A481 UDP-glucose 6-dehydrogenase; structural genomics, 99.57
2zyd_A480 6-phosphogluconate dehydrogenase, decarboxylating; 99.56
3ojo_A431 CAP5O; rossmann fold, complex with cofactor NAD an 99.55
3vtf_A444 UDP-glucose 6-dehydrogenase; two discrete alpha/be 99.55
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 99.48
3pid_A432 UDP-glucose 6-dehydrogenase; rossmann fold, oxidor 99.48
2q3e_A467 UDP-glucose 6-dehydrogenase; hexamer, structural g 99.44
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 99.42
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 99.41
1pgj_A478 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o 99.4
2f1k_A279 Prephenate dehydrogenase; tyrosine synthesis, X-RA 99.4
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 99.39
1vpd_A299 Tartronate semialdehyde reductase; structural geno 99.37
3g0o_A303 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine 99.35
2pgd_A482 6-phosphogluconate dehydrogenase; oxidoreductase ( 99.35
3qha_A296 Putative oxidoreductase; seattle structural genomi 99.31
4ezb_A317 Uncharacterized conserved protein; structural geno 99.3
1dlj_A402 UDP-glucose dehydrogenase; rossmann fold, ternary 99.3
2iz1_A474 6-phosphogluconate dehydrogenase, decarboxylating; 99.3
2gf2_A296 Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct 99.29
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 99.27
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 99.22
3cky_A301 2-hydroxymethyl glutarate dehydrogenase; rossmann 99.2
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 99.16
2p4q_A497 6-phosphogluconate dehydrogenase, decarboxylating; 99.15
2uyy_A316 N-PAC protein; long-chain dehydrogenase, cytokine; 99.13
2cvz_A289 Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; 99.12
1yb4_A295 Tartronic semialdehyde reductase; structural genom 99.1
3ego_A307 Probable 2-dehydropantoate 2-reductase; structural 99.1
1yqg_A263 Pyrroline-5-carboxylate reductase; structural geno 99.07
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 99.05
3tri_A280 Pyrroline-5-carboxylate reductase; amino acid bios 98.94
4gwg_A484 6-phosphogluconate dehydrogenase, decarboxylating; 98.91
3hn2_A312 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str 98.9
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 98.89
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 98.86
4huj_A220 Uncharacterized protein; PSI-biology, nysgrc, stru 98.83
2izz_A322 Pyrroline-5-carboxylate reductase 1; amino-acid bi 98.81
1i36_A264 Conserved hypothetical protein MTH1747; NADP bindi 98.79
3gt0_A247 Pyrroline-5-carboxylate reductase; structural geno 98.74
3qsg_A312 NAD-binding phosphogluconate dehydrogenase-like P; 98.73
3c7a_A404 Octopine dehydrogenase; L) stereospecific opine de 98.7
3b1f_A290 Putative prephenate dehydrogenase; enzyme, 4-hydro 98.63
2rcy_A262 Pyrroline carboxylate reductase; malaria, structur 98.62
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 98.6
2ew2_A316 2-dehydropantoate 2-reductase, putative; alpha-str 98.48
3hwr_A318 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A 98.47
3ghy_A335 Ketopantoate reductase protein; oxidoreductase, NA 98.35
3l6d_A306 Putative oxidoreductase; structural genomics, prot 98.29
3d1l_A266 Putative NADP oxidoreductase BF3122; structural ge 98.23
4gbj_A297 6-phosphogluconate dehydrogenase NAD-binding; stru 98.17
1np3_A338 Ketol-acid reductoisomerase; A DEEP figure-OF-eigh 98.16
2pv7_A298 T-protein [includes: chorismate mutase (EC 5.4.99 98.16
2ahr_A259 Putative pyrroline carboxylate reductase; pyrrolin 98.12
1jay_A212 Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma 98.12
3c24_A286 Putative oxidoreductase; YP_511008.1, structural g 98.06
3g17_A294 Similar to 2-dehydropantoate 2-reductase; structur 98.05
2qyt_A317 2-dehydropantoate 2-reductase; APC81190, porphyrom 97.99
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 97.91
2i76_A276 Hypothetical protein; NADP, dehydrogenase, TM1727, 97.9
2vns_A215 Metalloreductase steap3; metal-binding, transmembr 97.89
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 97.88
3fr7_A525 Putative ketol-acid reductoisomerase (OS05G057370 97.79
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 97.66
2yjz_A201 Metalloreductase steap4; oxidoreductase, metabolic 96.75
3ggo_A314 Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b 97.57
3obb_A300 Probable 3-hydroxyisobutyrate dehydrogenase; struc 97.56
2f1k_A279 Prephenate dehydrogenase; tyrosine synthesis, X-RA 97.48
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 97.43
3gg2_A 450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 97.42
4a7p_A 446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 97.41
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 97.4
3mog_A483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 97.21
3k6j_A460 Protein F01G10.3, confirmed by transcript evidenc; 97.2
2zyd_A 480 6-phosphogluconate dehydrogenase, decarboxylating; 96.94
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 96.67
1zcj_A463 Peroxisomal bifunctional enzyme; peroxisomal multi 96.61
3ktd_A341 Prephenate dehydrogenase; structural genomics, joi 96.57
2wtb_A725 MFP2, fatty acid multifunctional protein (ATMFP2); 96.16
1wdk_A715 Fatty oxidation complex alpha subunit; alpha2BETA2 96.14
2y0c_A 478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 95.89
1u8x_X472 Maltose-6'-phosphate glucosidase; structural genom 95.81
1obb_A480 Maltase, alpha-glucosidase; glycosidase, sulfinic 94.83
1s6y_A450 6-phospho-beta-glucosidase; hydrolase, structural 94.48
4f3y_A272 DHPR, dihydrodipicolinate reductase; structural ge 94.45
4ezb_A317 Uncharacterized conserved protein; structural geno 94.39
2pgd_A 482 6-phosphogluconate dehydrogenase; oxidoreductase ( 94.33
2g5c_A281 Prephenate dehydrogenase; TYRA, oxidoreductase; HE 93.56
3ijp_A288 DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, 93.5
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 93.42
2iz1_A 474 6-phosphogluconate dehydrogenase, decarboxylating; 92.96
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 92.77
3fef_A450 Putative glucosidase LPLD; gulosidase, structural 92.23
1zej_A293 HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural 92.07
2uyy_A316 N-PAC protein; long-chain dehydrogenase, cytokine; 91.8
1vpd_A299 Tartronate semialdehyde reductase; structural geno 91.79
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 91.69
3g0o_A303 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine 91.63
3dfu_A232 Uncharacterized protein from 6-phosphogluconate de 90.99
3qy9_A243 DHPR, dihydrodipicolinate reductase; rossmann fold 90.67
1oju_A294 MDH, malate dehydrogenase; hyperthermophilic, oxid 90.67
2gf2_A296 Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct 89.69
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 89.26
2ewd_A317 Lactate dehydrogenase,; protein-substrate_cofactor 88.93
1hyh_A309 L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 88.81
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 88.2
4dgs_A340 Dehydrogenase; structural genomics, PSI-biology, N 87.83
3ba1_A333 HPPR, hydroxyphenylpyruvate reductase; two domain 87.47
1pgj_A 478 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o 87.24
2nu8_A288 Succinyl-COA ligase [ADP-forming] subunit alpha; c 86.56
2cvz_A289 Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; 86.26
2yv1_A294 Succinyl-COA ligase [ADP-forming] subunit alpha; C 86.12
2hjr_A328 Malate dehydrogenase; malaria, structural genomics 86.02
1dih_A273 Dihydrodipicolinate reductase; oxidoreductase; HET 86.0
3ego_A307 Probable 2-dehydropantoate 2-reductase; structural 85.88
3cky_A301 2-hydroxymethyl glutarate dehydrogenase; rossmann 85.08
1yb4_A295 Tartronic semialdehyde reductase; structural genom 85.01
3gvx_A290 Glycerate dehydrogenase related protein; NYSGXRC, 84.05
2yv2_A297 Succinyl-COA synthetase alpha chain; COA-binding d 83.82
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 83.68
2dbq_A334 Glyoxylate reductase; D-3-phosphoglycerate dehydro 83.2
1mv8_A 436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 83.16
1ygy_A529 PGDH, D-3-phosphoglycerate dehydrogenase; oxidored 82.47
1oi7_A288 Succinyl-COA synthetase alpha chain; SCS, ligase, 82.35
2o3j_A 481 UDP-glucose 6-dehydrogenase; structural genomics, 82.35
2d59_A144 Hypothetical protein PH1109; COA binding, structur 82.21
2duw_A145 Putative COA-binding protein; ligand binding prote 81.89
3pp8_A315 Glyoxylate/hydroxypyruvate reductase A; structural 81.56
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 81.13
2gcg_A330 Glyoxylate reductase/hydroxypyruvate reductase; NA 80.39
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=5.9e-80  Score=640.18  Aligned_cols=309  Identities=47%  Similarity=0.774  Sum_probs=288.9

Q ss_pred             CcccccccCcHHHHHHHHHcCCCCCCCCCCCCCCCeEEecCHHHHhccCCEEEEecChHHHHHHHHHhhccCCCCCeEEE
Q psy14065          1 MYVYEEMIDGKKLTEIINETHENVKYLPGHKLPPNVVAVPDVVEAAKDADILVFVVPHQFIVRLCSQLLGKIKPDAVGLS   80 (492)
Q Consensus         1 ~~~~~~~~~~~~~~~~in~~~~N~~ylp~i~l~~~I~at~dl~~al~~aDiIilaVPs~~~~~vl~~l~~~l~~~~~iIs   80 (492)
                      ||+|+++++++.+++.||++|+|++|||+++||++|++|+|++++++++|+||+||||++++++++++++++++++++|+
T Consensus        70 lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~  149 (391)
T 4fgw_A           70 MWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAIS  149 (391)
T ss_dssp             EECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred             EEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEE
Confidence            69999999888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEccceeccCCccccHHHHHHhHhCCceEEEeCcChHHHHhhcCCceEEEeecCcc---------hHHHHHHHhcCCCce
Q psy14065         81 LIKGFDRAEGGGIDLISHIITRNLKIKMTVLMGANLAGEVAEEKFCETTIGCKDKT---------LGPLLHALLQTPNFR  151 (492)
Q Consensus        81 ~~KGl~~~~~~t~~~~se~i~e~l~~~~~vlsGPn~A~Ev~~~~pt~vvias~~~~---------~~~~v~~lf~~~~f~  151 (492)
                      ++|||++.. +..+++||++.+.++.+++++||||||.||++++||++++|+.+++         .++.++++|+++|||
T Consensus       150 ~~KGie~~~-~~~~~~se~i~e~~~~~~~vLsGPs~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~fr  228 (391)
T 4fgw_A          150 CLKGFEVGA-KGVQLLSSYITEELGIQCGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFH  228 (391)
T ss_dssp             CCCSCEEET-TEEECHHHHHHHHHCCEEEEEECSCCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEE
T ss_pred             ecccccccc-ccchhHHHHHHHHhCccceeccCCchHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEE
Confidence            999999731 3458999999999998899999999999999999999999987654         368899999999999


Q ss_pred             EEEcCCcchhhhhhhhHHHHHHHHHHhhhcCCCcChHHHHHHHHHHHHHHHHHHHCCCC-CccccccccccchhhhhccC
Q psy14065        152 VSVVDDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGA-KSATFFESCGVADLITTCYG  230 (492)
Q Consensus       152 v~~~~D~~GvEl~galKNv~AIa~Gi~~gl~~g~N~~aal~t~g~~Em~~l~~~~~~G~-~~~t~~glaGlGDl~~Tc~s  230 (492)
                      +|+++|++|||+|||||||||||+||+|||++|+|++|||||||++||.||+++|++|+ ++.||.||||+|||++||+|
T Consensus       229 vy~s~DviGvElgGAlKNViAIAaGi~dGlg~G~NakAALitrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~s  308 (391)
T 4fgw_A          229 VSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG  308 (391)
T ss_dssp             EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHS
T ss_pred             EEEeCCccceehHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecC
Confidence            99999999999999999999999999999999999999999999999999999997655 45567799999999999999


Q ss_pred             CCCHHHHHHHHhCCCChHHHHHHhcCCceeecchhHHHHHHHHHhcCCCCCCchhhhhHHhhcCCCChHHHHHHHhcCCC
Q psy14065        231 GRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPD  310 (492)
Q Consensus       231 ~RN~~~G~~l~~~G~~~~~~~~~~~~g~~~EG~~t~~~v~~l~~~~~l~~~~PI~~av~~Il~~~~~p~~~i~~L~~~~~  310 (492)
                      ||||+||+.|+++|++++++++++.+|+++||+.|++.++++++++++..+|||+++||+|+|++++|+++.+.+++++.
T Consensus       309 SRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~ta~~v~~l~~~~~v~~emPI~~~vy~IL~~~~~~~~~~~~l~~~~~  388 (391)
T 4fgw_A          309 GRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKEVHEWLETCGSVEDFPLFEAVYQIVYNNYPMKNLPDMIEELDL  388 (391)
T ss_dssp             SHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHHHHHHHHHHHHHTCSTTCHHHHHHHHHHHSCCCSTTHHHHHCC---
T ss_pred             CccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhCCCCHHHHHHHHHhccc
Confidence            99999999999779999999999988999999999999999999999965699999999999999999999988877653
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae} Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Back     alignment and structure
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} Back     alignment and structure
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} Back     alignment and structure
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} Back     alignment and structure
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* Back     alignment and structure
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* Back     alignment and structure
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* Back     alignment and structure
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Back     alignment and structure
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* Back     alignment and structure
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* Back     alignment and structure
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Back     alignment and structure
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Back     alignment and structure
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} Back     alignment and structure
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Back     alignment and structure
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Back     alignment and structure
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Back     alignment and structure
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} Back     alignment and structure
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* Back     alignment and structure
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} Back     alignment and structure
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A Back     alignment and structure
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} Back     alignment and structure
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* Back     alignment and structure
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 Back     alignment and structure
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} Back     alignment and structure
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* Back     alignment and structure
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A Back     alignment and structure
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} Back     alignment and structure
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} Back     alignment and structure
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} Back     alignment and structure
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Back     alignment and structure
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Back     alignment and structure
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} Back     alignment and structure
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 Back     alignment and structure
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A Back     alignment and structure
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Back     alignment and structure
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} Back     alignment and structure
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} Back     alignment and structure
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 Back     alignment and structure
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I* Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Back     alignment and structure
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Back     alignment and structure
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* Back     alignment and structure
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* Back     alignment and structure
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Back     alignment and structure
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Back     alignment and structure
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} Back     alignment and structure
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Back     alignment and structure
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Back     alignment and structure
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} Back     alignment and structure
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} Back     alignment and structure
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* Back     alignment and structure
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Back     alignment and structure
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} Back     alignment and structure
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* Back     alignment and structure
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* Back     alignment and structure
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Back     alignment and structure
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} Back     alignment and structure
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Back     alignment and structure
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* Back     alignment and structure
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} Back     alignment and structure
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} Back     alignment and structure
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Back     alignment and structure
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} Back     alignment and structure
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* Back     alignment and structure
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 Back     alignment and structure
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} Back     alignment and structure
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* Back     alignment and structure
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} Back     alignment and structure
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 492
d1n1ea1160 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydro 4e-32
d1n1ea1160 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydro 1e-24
d1txga1155 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydro 7e-27
d1txga1155 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydro 2e-20
d1n1ea2189 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogen 1e-16
d1n1ea2189 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogen 0.003
d1txga2180 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogen 7e-07
d1txga2180 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogen 7e-04
d1jaya_212 c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase 0.002
>d1n1ea1 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Length = 160 Back     information, alignment and structure

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Glycerol-3-phosphate dehydrogenase
domain: Glycerol-3-phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

 Score =  118 bits (297), Expect = 4e-32
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 5/153 (3%)

Query: 157 DVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFF 216
           D    E+  A+KN++A G+G  +GLG+G N +AA+I  GL+E+   T     G   +  F
Sbjct: 2   DTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTA--ALGGDGSAVF 59

Query: 217 ESCGVADLITTCYGGRNRKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNK 276
              G+ DL  TC    +R  +    K GK +   E +  +    +G  TAD +  + K  
Sbjct: 60  GLAGLGDLQLTCSSELSRNFTVGK-KLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQL 118

Query: 277 NMENKFPLFTAVHKICIGEMKPQQFIDAIREHP 309
            ++   PL   +++I   +  P+  +  +    
Sbjct: 119 KVK--MPLCHQIYEIVYKKKNPRDALADLLSCG 149
>d1n1ea1 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Length = 160 Back     information, alignment and structure
>d1txga1 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Length = 155 Back     information, alignment and structure
>d1txga1 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Length = 155 Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Length = 189 Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Length = 189 Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Length = 180 Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Length = 180 Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
d1n1ea1160 Glycerol-3-phosphate dehydrogenase {Trypanosome (L 100.0
d1txga1155 Glycerol-3-phosphate dehydrogenase {Archaeoglobus 100.0
d1n1ea1160 Glycerol-3-phosphate dehydrogenase {Trypanosome (L 100.0
d1txga1155 Glycerol-3-phosphate dehydrogenase {Archaeoglobus 100.0
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 99.97
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 99.94
d1vjta1193 Putative alpha-glucosidase TM0752 {Thermotoga mari 99.26
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 98.93
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 98.91
d2ahra2152 Pyrroline-5-carboxylate reductase ProC {Streptococ 98.84
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 98.81
d1yqga2152 Pyrroline-5-carboxylate reductase ProC {Neisseria 98.75
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 98.3
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 98.17
d2b0ja2242 5,10-methenyltetrahydromethanopterin hydrogenase, 97.88
d2i76a2153 Hypothetical protein TM1727 {Thermotoga maritima [ 97.6
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 97.33
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 97.25
d1mv8a198 GDP-mannose 6-dehydrogenase, middle domain {Pseudo 97.18
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 97.11
d1vpda2161 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 96.71
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 96.04
d1dlja198 UDP-glucose dehydrogenase (UDPGDH), middle domain 95.68
d1dlja2196 UDP-glucose dehydrogenase (UDPGDH) {Streptococcus 94.47
d3cuma2162 Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru 94.17
d1i36a2152 Conserved hypothetical protein MTH1747 {Archaeon M 93.19
d2pgda2176 6-phosphogluconate dehydrogenase {Sheep (Ovis orie 92.63
d1vjta1193 Putative alpha-glucosidase TM0752 {Thermotoga mari 91.7
d1pgja2178 6-phosphogluconate dehydrogenase {Trypanosoma bruc 91.35
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 89.49
d1u8xx1167 Maltose-6'-phosphate glucosidase GlvA {Bacillus su 88.25
d1vpda1133 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 87.68
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 86.37
d2csua1129 Acetate-CoA ligase alpha chain, AcdA, N-terminal d 86.27
d1s6ya1169 6-phospho-beta-glucosidase {Bacillus stearothermop 85.8
d1diha1162 Dihydrodipicolinate reductase {Escherichia coli [T 84.79
d1qmga2226 Class II ketol-acid reductoisomerase (KARI) {Spina 84.14
d2cvza1132 Hydroxyisobutyrate dehydrogenase {Thermus thermoph 81.2
d1obba1171 Alpha-glucosidase AglA {Thermotoga maritima [TaxId 80.65
>d1n1ea1 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Glycerol-3-phosphate dehydrogenase
domain: Glycerol-3-phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=100.00  E-value=3.4e-43  Score=321.03  Aligned_cols=148  Identities=29%  Similarity=0.472  Sum_probs=143.4

Q ss_pred             CCcchhhhhhhhHHHHHHHHHHhhhcCCCcChHHHHHHHHHHHHHHHHHHHCCCCCccccccccccchhhhhccC--CCC
Q psy14065        156 DDVDAVEICGALKNIVACGAGFVDGLGLGDNTKAAVIRLGLMEMVKFTELFYPGAKSATFFESCGVADLITTCYG--GRN  233 (492)
Q Consensus       156 ~D~~GvEl~galKNv~AIa~Gi~~gl~~g~N~~aal~t~g~~Em~~l~~~~~~G~~~~t~~glaGlGDl~~Tc~s--~RN  233 (492)
                      +|++|||+|||||||||||+||++|+++|+|+++|+++||++||.+|++++  |++++|++|+||+|||++||+|  |||
T Consensus         1 tD~~GvE~~galKNi~Aia~Gi~~gl~~g~N~~aali~~g~~Em~~~~~~~--g~~~~t~~~laGlGDli~Tc~s~~sRN   78 (160)
T d1n1ea1           1 TDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAAL--GGDGSAVFGLAGLGDLQLTCSSELSRN   78 (160)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHT--TCCSTTTTSTTTHHHHHHHTTCTTSHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHh--CCCccceeccccchhheeeeecchhHH
Confidence            699999999999999999999999999999999999999999999999999  9999999999999999999999  799


Q ss_pred             HHHHHHHHhCCCChHHHHHHhcCCceeecchhHHHHHHHHHhcCCCCCCchhhhhHHhhcCCCChHHHHHHHhcCCC
Q psy14065        234 RKVSEAFVKTGKSIKDLEDEMLNGQKLQGPFTADEVNYMLKNKNMENKFPLFTAVHKICIGEMKPQQFIDAIREHPD  310 (492)
Q Consensus       234 ~~~G~~l~~~G~~~~~~~~~~~~g~~~EG~~t~~~v~~l~~~~~l~~~~PI~~av~~Il~~~~~p~~~i~~L~~~~~  310 (492)
                      |+||+.+++ |.+++++++++  ++++||+.|++.++++++++++  ++||++++|+|++++.+|+++++.|++||.
T Consensus        79 ~~~G~~l~~-g~~~~e~~~~~--~~~vEG~~t~~~v~~l~~~~~i--~~Pi~~~vy~Il~~~~~p~~~i~~Lm~r~~  150 (160)
T d1n1ea1          79 FTVGKKLGK-GLPIEEIQRTS--KAVAEGVATADPLMRLAKQLKV--KMPLCHQIYEIVYKKKNPRDALADLLSCGL  150 (160)
T ss_dssp             HHHHHHHHH-TCCHHHHHHSC--CSCCHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHSCCCHHHHHHHHTTSCS
T ss_pred             HHHHHHHhc-cccHHHHHHhc--cchHHHHHHHHHHHHHHHHcCC--CCcHHHHHHHHHhCcCCHHHHHHHHHCCCC
Confidence            999999998 99999998876  8999999999999999999998  499999999999999999999999999984
>d1txga1 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1n1ea1 a.100.1.6 (A:198-357) Glycerol-3-phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1txga1 a.100.1.6 (A:181-335) Glycerol-3-phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mv8a1 a.100.1.4 (A:203-300) GDP-mannose 6-dehydrogenase, middle domain {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1dlja1 a.100.1.4 (A:197-294) UDP-glucose dehydrogenase (UDPGDH), middle domain {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vpda1 a.100.1.1 (A:164-296) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d2cvza1 a.100.1.1 (A:158-289) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure