Psyllid ID: psy14075

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410----
Protein Sequence
MEHGRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDDE
Secondary Structure (PSIPRED)
ccccccHHccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHcHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccHcccccHHHHHHHHHHHHHHHHcHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEcccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mehgrshlteitpedvarenrhKYLMGETKAVGVMFGSKAFVQLLANPLvgilthrvgyslpmFTGFVIMFLSTLIFAFGRTYGVLFLARSlqgigsscssvsgmgmlaerypddrergnAMGIALGGLALgvligppfggimyqfvgktAPFLILSALALGDGLLQLLLlqpgvvkqevepptlkslvmdPYILIAAGAITfantgiamlepslpiwmmdtmgadkwqqgvsflPASISYLIgtnlfgplgHRMGRYLAALLGLLIIGICLMMIplarninhlivpnaglGFAIgmvdssmmpelgylvdIRHTAVYGSVYAIGDVAFCLGFaigpamsgtlvnTIGFEWMLFIIAILDFMYApllyllrnpptkeekkvGRQTLINEKSSTLINEKSSVRYITyqneeddde
Flexible Loop (DISEMBL)
mehgrshlteitpedvarenRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNpptkeekkvgrqtlineksstlinekssvryityqneeddde
Low Complexity Region (SEG)
MEHGRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARslqgigsscssvsgmgMLAERYPDDRERGNAMgialgglalgvligPPFGGIMYQFVGKTAPFlilsalalgdgllqllllqPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYlaallglliigiclmmiplARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDDE
Disordered region (IsUnstruct)
**********************KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGML**********GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR*******************************************
Disordered Region (DISOPRED)
**HGRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLL*******************MDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL********************************************
Disordered Region (DISEMBL)
MEHGRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDDE
Disordered Region (DISPRO)
**********************KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK*E************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEHGRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDDE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	414	2.2.26 [Sep-21-2011]
Q27963	517	Synaptic vesicular amine	yes	N/A	0.954	0.764	0.611	1e-138
Q8BRU6	517	Synaptic vesicular amine	yes	N/A	0.881	0.705	0.644	1e-136
Q01827	515	Synaptic vesicular amine	yes	N/A	0.980	0.788	0.592	1e-136
Q05940	514	Synaptic vesicular amine	yes	N/A	0.958	0.772	0.596	1e-136
P54219	525	Chromaffin granule amine	no	N/A	0.859	0.678	0.647	1e-119
Q01818	521	Chromaffin granule amine	no	N/A	0.946	0.752	0.580	1e-116
Q8R090	521	Chromaffin granule amine	no	N/A	0.939	0.746	0.576	1e-114
Q08C75	513	Probable vesicular acetyl	no	N/A	0.881	0.711	0.410	3e-85
Q91514	511	Vesicular acetylcholine t	N/A	N/A	0.857	0.694	0.420	1e-84
Q91498	511	Vesicular acetylcholine t	N/A	N/A	0.874	0.708	0.425	2e-84

>sp|Q27963|VMAT2_BOVIN Synaptic vesicular amine transporter OS=Bos taurus GN=SLC18A2 PE=1 SV=1

 Score =  493 bits (1268), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/396 (61%), Positives = 308/396 (77%), Gaps = 1/396 (0%)

Query: 20  NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 79
           +  K L+ E   VG++F SKA VQLL NP +G+LT+R+GY +PMFTGF IMF+ST++FAF
Sbjct: 122 SEDKDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFTGFCIMFISTVMFAF 181

Query: 80  GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF 139
            RTY  L +ARSLQGIGSSCSSV+GMGMLA  Y DD ERGNAMGIALGGLA+GVL+GPPF
Sbjct: 182 SRTYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGVLVGPPF 241

Query: 140 GGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT-LKSLVMDPYILIAA 198
           G ++Y+FVGKTAPFL+L+AL L DG +QL +LQP  V+ E +  T L +L+ DPYILIAA
Sbjct: 242 GSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLRDPYILIAA 301

Query: 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY 258
           G+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPAS+SYLIGTN+FG L H+MGR+
Sbjct: 302 GSICFANMGIAMLEPALPIWMMETMCSHKWQLGVAFLPASVSYLIGTNVFGILAHKMGRW 361

Query: 259 LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318
           L ALLG++I+G+ ++ IPLA+NI  LI PN G+GFAIGMVDSSMMP +GYLVD+RH +VY
Sbjct: 362 LCALLGMIIVGMSILCIPLAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVY 421

Query: 319 GSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEE 378
           GSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL + LR+PP KEE
Sbjct: 422 GSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRSPPAKEE 481

Query: 379 KKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDDE 414
           K            + +  + SS  +   ++EE + +
Sbjct: 482 KMAILMDHNCPIKTKMYTQNSSQSHPIGEDEESESD 517

Involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters. Pumps cytosolic monoamines including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. Requisite for vesicular amine storage prior to secretion via exocytosis.
Bos taurus (taxid: 9913)

>sp|Q8BRU6|VMAT2_MOUSE Synaptic vesicular amine transporter OS=Mus musculus GN=Slc18a2 PE=1 SV=1

 Score =  485 bits (1248), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/368 (64%), Positives = 296/368 (80%), Gaps = 3/368 (0%)

Query: 13  PEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 72
           P D   E++   L+ E   VG++F SKA VQLL NP +G+LT+R+GY +PMF GF IMF+
Sbjct: 117 PPDCPSEDKD--LLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFAGFCIMFI 174

Query: 73  STLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALG 132
           ST++FAF  +Y  L +ARSLQGIGSSCSSV+GMGMLA  Y DD ERGNAMGIALGGLA+G
Sbjct: 175 STVMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMG 234

Query: 133 VLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT-LKSLVMD 191
           VL+GPPFG ++Y+FVGKTAPFL+L+AL L DG +QL +LQP  V+ E +  T L +L+ D
Sbjct: 235 VLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLKD 294

Query: 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251
           PYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPASISYLIGTN+FG L
Sbjct: 295 PYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGIL 354

Query: 252 GHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311
            H+MGR+L ALLG++++GI ++ IP A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD
Sbjct: 355 AHKMGRWLCALLGMIVVGISILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVD 414

Query: 312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
           +RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL + LR
Sbjct: 415 LRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDIVFAPLCFFLR 474

Query: 372 NPPTKEEK 379
           +PP KEEK
Sbjct: 475 SPPAKEEK 482

Involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters. Pumps cytosolic monoamines including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. Requisite for vesicular amine storage prior to secretion via exocytosis.

Mus musculus (taxid: 10090)

>sp|Q01827|VMAT2_RAT Synaptic vesicular amine transporter OS=Rattus norvegicus GN=Slc18a2 PE=1 SV=2

 Score =  484 bits (1247), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/417 (59%), Positives = 311/417 (74%), Gaps = 11/417 (2%)

Query: 2   EHGRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSL 61
           +H  ++ T   P D   E+R   L+ E   VG++F SKA VQLL NP +G+LT+R+GY +
Sbjct: 106 QHTVANTT--VPSDCPSEDRD--LLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPI 161

Query: 62  PMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNA 121
           PMF GF IMF+ST++FAF  +Y  L +ARSLQGIGSSCSSV+GMGMLA  Y DD ERG  
Sbjct: 162 PMFAGFCIMFISTVMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGKP 221

Query: 122 MGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVE 181
           MGIALGGLA+GVL+GPPFG ++Y+FVGKTAPFL+L+AL L DG +QL +LQP  V+ E +
Sbjct: 222 MGIALGGLAMGVLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQ 281

Query: 182 PPT-LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASIS 240
             T L +L+ DPYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPASIS
Sbjct: 282 KGTPLTTLLKDPYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASIS 341

Query: 241 YLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDS 300
           YLIGTN+FG L H+MGR+L ALLG++I+GI ++ IP A+NI  LI PN G+GFAIGMVDS
Sbjct: 342 YLIGTNIFGILAHKMGRWLCALLGMVIVGISILCIPFAKNIYGLIAPNFGVGFAIGMVDS 401

Query: 301 SMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILD 360
           SMMP +GYLVD+RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D
Sbjct: 402 SMMPIMGYLVDLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIID 461

Query: 361 FMYAPLLYLLRNPPTKEEKK---VGRQTLINEKSSTLINEKSSVRYITYQNEEDDDE 414
             +APL + LR+PP KEEK    +     I  K  T  N +S   Y    +EE + +
Sbjct: 462 IAFAPLCFFLRSPPAKEEKMAILMDHNCPIKRKMYTQNNVQS---YPIGDDEESESD 515

Involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters. Pumps cytosolic monoamines including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. Requisite for vesicular amine storage prior to secretion via exocytosis.

Rattus norvegicus (taxid: 10116)

>sp|Q05940|VMAT2_HUMAN Synaptic vesicular amine transporter OS=Homo sapiens GN=SLC18A2 PE=1 SV=2

 Score =  484 bits (1247), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/406 (59%), Positives = 309/406 (76%), Gaps = 9/406 (2%)

Query: 13  PEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 72
           P D   E++   L+ E   VG++F SKA VQL+ NP +G+LT+R+GY +P+F GF IMF+
Sbjct: 114 PSDCPSEDKD--LLNENVQVGLLFASKATVQLITNPFIGLLTNRIGYPIPIFAGFCIMFV 171

Query: 73  STLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALG 132
           ST++FAF  +Y  L +ARSLQGIGSSCSSV+GMGMLA  Y DD ERGN MGIALGGLA+G
Sbjct: 172 STIMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNVMGIALGGLAMG 231

Query: 133 VLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT-LKSLVMD 191
           VL+GPPFG ++Y+FVGKTAPFL+L+AL L DG +QL +LQP  V+ E +  T L +L+ D
Sbjct: 232 VLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLKD 291

Query: 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251
           PYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPASISYLIGTN+FG L
Sbjct: 292 PYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGIL 351

Query: 252 GHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311
            H+MGR+L ALLG++I+G+ ++ IP A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD
Sbjct: 352 AHKMGRWLCALLGMIIVGVSILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVD 411

Query: 312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
           +RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL + LR
Sbjct: 412 LRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLR 471

Query: 372 NPPTKEEKK---VGRQTLINEKSSTLINEKSSVRYITYQNEEDDDE 414
           +PP KEEK    +     I  K  T  N +S   Y   ++EE + +
Sbjct: 472 SPPAKEEKMAILMDHNCPIKTKMYTQNNIQS---YPIGEDEESESD 514

Involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters. Pumps cytosolic monoamines including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. Requisite for vesicular amine storage prior to secretion via exocytosis.

Homo sapiens (taxid: 9606)

>sp|P54219|VMAT1_HUMAN Chromaffin granule amine transporter OS=Homo sapiens GN=SLC18A1 PE=2 SV=1

 Score =  429 bits (1102), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/357 (64%), Positives = 285/357 (79%), Gaps = 1/357 (0%)

Query: 24  YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY 83
           +L  E   VGV+F SKA +QLL NP VG LT+R+GY +PMF GFVIMFLST++FAF  TY
Sbjct: 131 FLEEEITRVGVLFASKAVMQLLVNPFVGPLTNRIGYHIPMFAGFVIMFLSTVMFAFSGTY 190

Query: 84  GVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 143
            +LF+AR+LQGIGSS SSV+G+GMLA  Y DD ERG AMG ALGGLALG+L+G PFG +M
Sbjct: 191 TLLFVARTLQGIGSSFSSVAGLGMLASVYTDDHERGRAMGTALGGLALGLLVGAPFGSVM 250

Query: 144 YQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT-LKSLVMDPYILIAAGAIT 202
           Y+FVGK+APFLIL+ LAL DG LQL +LQP  V  E    T L  L+ DPYIL+AAG+I 
Sbjct: 251 YEFVGKSAPFLILAFLALLDGALQLCILQPSKVSPESAKGTPLFMLLKDPYILVAAGSIC 310

Query: 203 FANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAAL 262
           FAN G+A+LEP+LPIWMM TM + KWQ G++FLPAS+SYLIGTNLFG L ++MGR+L +L
Sbjct: 311 FANMGVAILEPTLPIWMMQTMCSPKWQLGLAFLPASVSYLIGTNLFGVLANKMGRWLCSL 370

Query: 263 LGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVY 322
           +G+L++G  L+ +PLA NI  LI PNAGLG AIGMVDSSMMP +G+LVD+RHT+VYGSVY
Sbjct: 371 IGMLVVGTSLLCVPLAHNIFGLIGPNAGLGLAIGMVDSSMMPIMGHLVDLRHTSVYGSVY 430

Query: 323 AIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEK 379
           AI DVAFC+GFAIGP+  G +V  IGF W++ I  +++ +YAPL Y LR+PP KEEK
Sbjct: 431 AIADVAFCMGFAIGPSTGGAIVKAIGFPWLMVITGVINIVYAPLCYYLRSPPAKEEK 487

Involved in the vesicular transport of biogenic amines.

Homo sapiens (taxid: 9606)

>sp|Q01818|VMAT1_RAT Chromaffin granule amine transporter OS=Rattus norvegicus GN=Slc18a1 PE=2 SV=1

 Score =  420 bits (1079), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/393 (58%), Positives = 297/393 (75%), Gaps = 1/393 (0%)

Query: 23  KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT 82
           ++L  E   +G++F SKA +QLL NP VG LT+R+GY +PMF GF+IMFLSTL+FAF  T
Sbjct: 127 EFLEEENVRIGILFASKALMQLLVNPFVGPLTNRIGYHIPMFVGFMIMFLSTLMFAFSGT 186

Query: 83  YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 142
           Y +LF+AR+LQGIGSS SSV+G+GMLA  Y D+ ERG AMGIALGGLALG+L+G PFG +
Sbjct: 187 YALLFVARTLQGIGSSFSSVAGLGMLASVYTDNYERGRAMGIALGGLALGLLVGAPFGSV 246

Query: 143 MYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT-LKSLVMDPYILIAAGAI 201
           MY+FVGK++PFLIL+ LAL DG LQL +L P  V  E    T L +L+ DPYIL+AAG+I
Sbjct: 247 MYEFVGKSSPFLILAFLALLDGALQLCILWPSKVSPESAMGTSLLTLLKDPYILVAAGSI 306

Query: 202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAA 261
             AN G+A+LEP+LPIWMM TM + +WQ G++FLPAS++YLIGTNLFG L ++MGR+L +
Sbjct: 307 CLANMGVAILEPTLPIWMMQTMCSPEWQLGLAFLPASVAYLIGTNLFGVLANKMGRWLCS 366

Query: 262 LLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV 321
           L+G++ +GI L+ +PLA NI  LI PNAGLGFAIGMVDSS+MP +GYLVD+RHT+VYGSV
Sbjct: 367 LVGMVAVGISLLCVPLAHNIFGLIGPNAGLGFAIGMVDSSLMPIMGYLVDLRHTSVYGSV 426

Query: 322 YAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKV 381
           YAI DVAFC+GFAIGP+  G +V  IGF W++ II  ++ +YAPL   L+NPP KEEK+ 
Sbjct: 427 YAIADVAFCVGFAIGPSTGGVIVQVIGFPWLMVIIGTINIIYAPLCCFLQNPPAKEEKRA 486

Query: 382 GRQTLINEKSSTLINEKSSVRYITYQNEEDDDE 414
                   ++     +K +  +   +N +D   
Sbjct: 487 ILSQECPTETQMYTFQKPTKAFPLGENSDDPSS 519

Involved in the vesicular transport of biogenic amines.

Rattus norvegicus (taxid: 10116)

>sp|Q8R090|VMAT1_MOUSE Chromaffin granule amine transporter OS=Mus musculus GN=Slc18a1 PE=2 SV=1

 Score =  413 bits (1061), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/390 (57%), Positives = 295/390 (75%), Gaps = 1/390 (0%)

Query: 23  KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT 82
           ++L  E   +G++F SKA +QLL NP VG LT+R+GY +PMF GF+IMFLSTL+FAF  T
Sbjct: 127 EFLEEENVRIGILFASKALMQLLVNPFVGPLTNRIGYHIPMFVGFMIMFLSTLMFAFSGT 186

Query: 83  YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI 142
           Y +LF+AR+LQGIGSS SSV+G+GMLA  Y D+ ERG AMGIALGGLALG+L+G PFG +
Sbjct: 187 YALLFVARTLQGIGSSFSSVAGLGMLASVYTDNYERGRAMGIALGGLALGLLVGAPFGSV 246

Query: 143 MYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT-LKSLVMDPYILIAAGAI 201
           MY+FVGK++PFLIL+ LAL DG LQ  +L P  V  E    T L +L+ DPYIL+AAG+I
Sbjct: 247 MYEFVGKSSPFLILAFLALLDGALQFCILWPSKVSPESAMGTPLLTLLKDPYILVAAGSI 306

Query: 202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAA 261
             AN G+A+LEP+LPIWMM TM + +WQ G++FLPAS++YLIGTNLFG L ++MGR+L +
Sbjct: 307 CLANMGVAILEPTLPIWMMQTMCSPEWQLGLAFLPASVAYLIGTNLFGVLANKMGRWLCS 366

Query: 262 LLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV 321
           L+G++ +GI L+ +PLA NI  LI PNAGLGFAIGMVDSS+MP +GYLVD+RHT+VYGSV
Sbjct: 367 LVGMVAVGISLLCVPLAHNIFGLIGPNAGLGFAIGMVDSSLMPIMGYLVDLRHTSVYGSV 426

Query: 322 YAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKV 381
           YAI DVAFC+GFAIGP+  G +V  IGF W++ II  ++ +YAPL   L+NPP KEE+  
Sbjct: 427 YAIADVAFCVGFAIGPSTGGVIVPVIGFPWLMVIIGTINIIYAPLCCFLQNPPAKEEELA 486

Query: 382 GRQTLINEKSSTLINEKSSVRYITYQNEED 411
                   ++     ++ +  +   +N +D
Sbjct: 487 ILNQECPTETQMYTIQRPTKEFPLGENSDD 516

Involved in the vesicular transport of biogenic amines.

Mus musculus (taxid: 10090)

>sp|Q08C75|VACHA_DANRE Probable vesicular acetylcholine transporter-A OS=Danio rerio GN=slc18a3a PE=2 SV=1

 Score =  315 bits (808), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 152/370 (41%), Positives = 236/370 (63%), Gaps = 5/370 (1%)

Query: 32  VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARS 91
           +GV+F SKA +QLL NPL G    RVGY +P+  G  IMF+ST IFAF   Y  LF+ARS
Sbjct: 97  IGVLFASKAILQLLVNPLTGTFIDRVGYDIPLLIGLSIMFVSTCIFAFAENYATLFMARS 156

Query: 92  LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTA 151
           LQG+GS+ +  SG+ M+A++Y ++ ER  A+GIAL  ++ G L  PPFGG++Y+F GK  
Sbjct: 157 LQGLGSAFADTSGIAMIADKYAEESERSRALGIALAFISFGSLAAPPFGGVLYEFAGKRF 216

Query: 152 PFLILSALALGDGLLQLLLLQPGVVKQEVEPPT---LKSLVMDPYILIAAGAITFANTGI 208
           PF+ L+ + L DG+L L +L+P   +     P    +  L++DPYI + AGA+T  N  +
Sbjct: 217 PFIALACVCLADGILCLTVLKPFSSRTRENMPVGTPIYKLMIDPYIAVVAGALTTCNIPL 276

Query: 209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG--RYLAALLGLL 266
           A LEP++  WM +TM A +WQ G+++LPA   +++G  L   L  +    ++    LG++
Sbjct: 277 AFLEPTIANWMEETMNASQWQIGITWLPAFFPHILGVYLTVKLAAKYPHLQWFYGALGMV 336

Query: 267 IIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGD 326
           IIG    ++P  +N   LI+P  G+ F I +VD++++P L +LVD+RH +VYGSVYAI D
Sbjct: 337 IIGASSCIVPACKNFEQLIIPLCGVCFGIALVDTALLPTLAFLVDVRHVSVYGSVYAIAD 396

Query: 327 VAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKVGRQTL 386
           +++C+ +A+GP ++G +V+ +GF  +   + + + +YAP L LLRN    +     R  L
Sbjct: 397 ISYCVAYALGPIVAGKIVHDLGFVQLNLGMGLANVLYAPALLLLRNVSLMKPSHSERNML 456

Query: 387 INEKSSTLIN 396
           + E ++ L +
Sbjct: 457 LEEGATGLYD 466

Involved in acetylcholine transport into synaptic vesicles.

Danio rerio (taxid: 7955)

>sp|Q91514|VACHT_TORTO Vesicular acetylcholine transporter OS=Torpedo torpedo PE=2 SV=1

 Score =  313 bits (802), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 153/364 (42%), Positives = 233/364 (64%), Gaps = 9/364 (2%)

Query: 27  GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVL 86
            E   +GV+F SKA +QLL+NP  G    RVGY +P+  G  IMF ST+ FAFG +Y +L
Sbjct: 102 NEDIQIGVLFASKAILQLLSNPFTGTFIDRVGYDIPLLIGLTIMFFSTITFAFGESYAIL 161

Query: 87  FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 146
           F ARSLQG+GS+ +  SG+ M+A++Y ++ ER  A+GIAL  ++ G L+ PPFGG++YQF
Sbjct: 162 FAARSLQGLGSAFADTSGIAMIADKYTEESERTQALGIALAFISFGSLVAPPFGGVLYQF 221

Query: 147 VGKTAPFLILSALALGDGLLQLLLLQPGVVKQE---VEPPTLKSLVMDPYILIAAGAITF 203
            GK  PFL+LS + L DG+L L+++ P   +     ++   +  L++DPYI + AGA+T 
Sbjct: 222 AGKWVPFLVLSFVCLLDGILLLMVVTPFASRTRGNTLQGTPIHKLMIDPYIAVVAGALTT 281

Query: 204 ANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY--LAA 261
            N  +A LEP++  WM  TM A +WQ G+++LPA   +++G  +   L  +   Y  L  
Sbjct: 282 CNIPLAFLEPTISNWMKKTMNASEWQMGITWLPAFFPHILGVYITVKLAAKYPNYQWLYG 341

Query: 262 LLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV 321
             GL+IIG+    IP  RN   LI+P   L F I +VD++++P L +LVDIR+ +VYGSV
Sbjct: 342 AFGLVIIGVSSCTIPACRNFEELIIPLCALCFGIALVDTALLPTLAFLVDIRYVSVYGSV 401

Query: 322 YAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN----PPTKE 377
           YAI D+++ + +A+GP M+G +V+ +GF  +   + +++ +YAP L  LRN     P+  
Sbjct: 402 YAIADISYSVAYALGPIMAGQIVHDLGFVQLNLGMGLVNILYAPALLFLRNVCQMKPSLS 461

Query: 378 EKKV 381
           E+ +
Sbjct: 462 ERNI 465

Involved in acetylcholine transport into synaptic vesicles.

Torpedo torpedo (taxid: 30481)

>sp|Q91498|VACHT_TORMA Vesicular acetylcholine transporter OS=Torpedo marmorata PE=2 SV=2

 Score =  313 bits (801), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 233/369 (63%), Gaps = 7/369 (1%)

Query: 27  GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVL 86
            E   +GV+F SKA +QLL+NP  G    RVGY +P+  G  IMF ST+ FAFG +Y +L
Sbjct: 102 NEDIQIGVLFASKAILQLLSNPFTGTFIDRVGYDIPLLIGLTIMFFSTITFAFGESYAIL 161

Query: 87  FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF 146
           F ARSLQG+GS+ +  SG+ M+A++Y ++ ER  A+GIAL  ++ G L+ PPFGG++YQF
Sbjct: 162 FAARSLQGLGSAFADTSGIAMIADKYTEESERTQALGIALAFISFGSLVAPPFGGVLYQF 221

Query: 147 VGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVE----PPTLKSLVMDPYILIAAGAIT 202
            GK  PFL+LS + L DG+L L+++ P   +  V      P  K L++DPYI + AGA+T
Sbjct: 222 AGKWVPFLVLSFVCLLDGILLLMVVTPFASRTRVNTLQGTPIYK-LMIDPYIAVVAGALT 280

Query: 203 FANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY--LA 260
             N  +A LEP++  WM  TM A +WQ G+++LPA   +++G  +   L  +   Y  L 
Sbjct: 281 TCNIPLAFLEPTISNWMKKTMNASEWQMGITWLPAFFPHILGVYITVKLAAKYPNYQWLY 340

Query: 261 ALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGS 320
             +GL+IIG     IP  RN   LI+P   L F I +VD++++P L +LVDIR+ +VYGS
Sbjct: 341 GAVGLVIIGASSCTIPACRNFEELIIPLCALCFGIALVDTALLPTLAFLVDIRYVSVYGS 400

Query: 321 VYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKK 380
           VYAI D+++ + +A+GP M+G +V+ +GF  +   + +++ +YAP L  LRN    +   
Sbjct: 401 VYAIADISYSVAYALGPIMAGQIVHDLGFVQLNLGMGLVNILYAPGLLFLRNVCQMKPSL 460

Query: 381 VGRQTLINE 389
             R  L+ E
Sbjct: 461 SERNILLEE 469

Involved in acetylcholine transport into synaptic vesicles.

Torpedo marmorata (taxid: 7788)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	414
307184508	513	Synaptic vesicular amine transporter [Ca	0.944	0.762	0.803	0.0
307198448	517	Chromaffin granule amine transporter [Ha	0.939	0.752	0.807	0.0
383860874	521	PREDICTED: synaptic vesicular amine tran	0.939	0.746	0.8	0.0
332028802	504	Synaptic vesicular amine transporter [Ac	0.929	0.763	0.813	0.0
340725698	524	PREDICTED: synaptic vesicular amine tran	0.956	0.755	0.781	0.0
350403795	524	PREDICTED: synaptic vesicular amine tran	0.956	0.755	0.781	0.0
345482461	505	PREDICTED: synaptic vesicular amine tran	0.958	0.786	0.777	0.0
347971984	512	AGAP004476-PA [Anopheles gambiae str. PE	0.929	0.751	0.797	0.0
328709288	478	PREDICTED: synaptic vesicular amine tran	0.939	0.813	0.81	1e-179
170043165	524	vesicular monoamine transporter [Culex q	0.944	0.746	0.790	1e-178

>gi|307184508|gb|EFN70897.1| Synaptic vesicular amine transporter [Camponotus floridanus]

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/402 (80%), Positives = 365/402 (90%), Gaps = 11/402 (2%)

Query: 12  TPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF 71
           +PE   +E RH+ L+ ET AVG+MF SKAFVQLLANP+VG LTH++GYS+PMFTGF+IMF
Sbjct: 123 SPEMKEKEQRHRELLEETVAVGMMFASKAFVQLLANPIVGPLTHKIGYSIPMFTGFIIMF 182

Query: 72  LSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLAL 131
           LSTLIFAFGR+YG+LFLAR+LQGIGSSCSSVSGMGMLAERY DD+ERGNAMGIALGGLAL
Sbjct: 183 LSTLIFAFGRSYGILFLARALQGIGSSCSSVSGMGMLAERYQDDKERGNAMGIALGGLAL 242

Query: 132 GVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMD 191
           GVLIGPPFGG+MY+FVGK+APFL+LSALALGDGLLQLL+LQP VV  E +PP+LKSLV D
Sbjct: 243 GVLIGPPFGGVMYEFVGKSAPFLVLSALALGDGLLQLLMLQPSVVYTETKPPSLKSLVTD 302

Query: 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251
           PYI++AAGAITFAN GIAMLEPSLPIWMMDTMGA +W+QG +FLPASISYLIGTNLFGPL
Sbjct: 303 PYIILAAGAITFANMGIAMLEPSLPIWMMDTMGASRWKQGATFLPASISYLIGTNLFGPL 362

Query: 252 GHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311
           GH+MGR+LA+L+GL++IGICLM IPLAR+INHLIVPNAGLGFAIGMVDSSMMP+LGYLVD
Sbjct: 363 GHKMGRWLASLIGLVVIGICLMCIPLARSINHLIVPNAGLGFAIGMVDSSMMPQLGYLVD 422

Query: 312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
           IRHTAVYGSVYAIGDVAFCLGFAIGPA+SGTLVNTIGFEWMLF IA+L+FMYAPL+Y LR
Sbjct: 423 IRHTAVYGSVYAIGDVAFCLGFAIGPALSGTLVNTIGFEWMLFGIAMLNFMYAPLMYFLR 482

Query: 372 NPPTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
            PP KEEK+           S +I EKSSVRY+TYQNEE+D 
Sbjct: 483 APPNKEEKE-----------SLIIGEKSSVRYVTYQNEEEDQ 513

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307198448|gb|EFN79390.1| Chromaffin granule amine transporter [Harpegnathos saltator]

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/400 (80%), Positives = 365/400 (91%), Gaps = 11/400 (2%)

Query: 14  EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 73
           E   +E RH+ L+ ET AVG+MF SKAFVQLLANP+VG LTH++GYS+PMFTGF+IMFLS
Sbjct: 129 EIKKKEQRHRELLEETVAVGMMFASKAFVQLLANPIVGPLTHKIGYSIPMFTGFIIMFLS 188

Query: 74  TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV 133
           TLIFAFGR+YG+LFLAR+LQGIGSSCSSVSGMGMLAERY DD+ERGNAMGIALGGLALGV
Sbjct: 189 TLIFAFGRSYGILFLARALQGIGSSCSSVSGMGMLAERYQDDKERGNAMGIALGGLALGV 248

Query: 134 LIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPY 193
           LIGPPFGG+MYQFVGK+APFL+LSALALGDGLLQLL+LQP VV  E EPP+LKSL+ DPY
Sbjct: 249 LIGPPFGGVMYQFVGKSAPFLVLSALALGDGLLQLLMLQPSVVYTEAEPPSLKSLITDPY 308

Query: 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH 253
           I+IAAGAITFAN GIAMLEPSLPIWMMDTMGAD+W+QGV+FLPASISYLIGTNLFGPLGH
Sbjct: 309 IVIAAGAITFANMGIAMLEPSLPIWMMDTMGADRWKQGVTFLPASISYLIGTNLFGPLGH 368

Query: 254 RMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313
           +MGR+LA+L+GL++IG+CLM IPLAR+I HLI+PNAGLGFAIGMVDSSMMPELGYLVDIR
Sbjct: 369 KMGRWLASLIGLVVIGLCLMCIPLARSIGHLIIPNAGLGFAIGMVDSSMMPELGYLVDIR 428

Query: 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373
           HTAVYGSVYAIGDVAFCLGFAIGPA+SGTLVN+IGFEWMLF IAIL+F+YAPL+Y L+ P
Sbjct: 429 HTAVYGSVYAIGDVAFCLGFAIGPALSGTLVNSIGFEWMLFGIAILNFIYAPLMYFLKAP 488

Query: 374 PTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
           PTKE           EK+S +I EKSSVRY+TYQNEE+D 
Sbjct: 489 PTKE-----------EKTSLIIGEKSSVRYVTYQNEEEDQ 517

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860874|ref|XP_003705913.1| PREDICTED: synaptic vesicular amine transporter-like [Megachile rotundata]

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/400 (80%), Positives = 364/400 (91%), Gaps = 11/400 (2%)

Query: 14  EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 73
           E   +E RH+ L+ ET AVG+MF SKAFVQLLANP+VG LTH++GYS+PMFTGFVIMFLS
Sbjct: 133 EKEEKEQRHRELLEETVAVGIMFASKAFVQLLANPIVGPLTHKIGYSIPMFTGFVIMFLS 192

Query: 74  TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV 133
           TLIFAFGR+YG+LFLAR+LQGIGSSCSSVSGMGMLAER+ DD+ERGNAMGIALGGLALGV
Sbjct: 193 TLIFAFGRSYGILFLARALQGIGSSCSSVSGMGMLAERFQDDKERGNAMGIALGGLALGV 252

Query: 134 LIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPY 193
           LIGPPFGG+MY+FVGK+APFL+LSALALGDG+LQLL+LQP VV  E EPP+LKSL+ DPY
Sbjct: 253 LIGPPFGGVMYEFVGKSAPFLVLSALALGDGILQLLVLQPSVVYTETEPPSLKSLITDPY 312

Query: 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH 253
           I++AAGAITFAN GIAMLEPSLPIWMMDTMGA +W+QG +FLPASISYLIGTNLFGPLGH
Sbjct: 313 IVLAAGAITFANMGIAMLEPSLPIWMMDTMGASRWKQGATFLPASISYLIGTNLFGPLGH 372

Query: 254 RMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313
           RMGR+LA+L+GL++IGICLM IPLAR+I+HLIVPNAGLGFAIGMVDSSMMPELGYL+DIR
Sbjct: 373 RMGRWLASLIGLVVIGICLMCIPLARSIDHLIVPNAGLGFAIGMVDSSMMPELGYLMDIR 432

Query: 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373
           H+AVYGSVYAIGDVAFCLGFA+GPA+SGTLVN+IGFEWMLF IAIL+F+YAPLLY LR P
Sbjct: 433 HSAVYGSVYAIGDVAFCLGFAVGPALSGTLVNSIGFEWMLFGIAILNFLYAPLLYFLRAP 492

Query: 374 PTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
           PTKEEKK           S +I EKSSVRY+TYQNEE++ 
Sbjct: 493 PTKEEKK-----------SLIIGEKSSVRYVTYQNEEEEQ 521

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028802|gb|EGI68831.1| Synaptic vesicular amine transporter [Acromyrmex echinatior]

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/396 (81%), Positives = 363/396 (91%), Gaps = 11/396 (2%)

Query: 18  RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 77
           +E RH+ L+ ET AVG+MF SKAFVQLLANP+VG LTH++GYS+PMFTGF+IMFLSTLIF
Sbjct: 120 KEQRHRELLEETVAVGMMFASKAFVQLLANPIVGPLTHKIGYSIPMFTGFIIMFLSTLIF 179

Query: 78  AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGP 137
           AFGR+YG+LFLAR+LQGIGSSCSSVSGMGMLAERY DD+ERGNAMGIALGGLALGVLIGP
Sbjct: 180 AFGRSYGILFLARALQGIGSSCSSVSGMGMLAERYQDDKERGNAMGIALGGLALGVLIGP 239

Query: 138 PFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIA 197
           PFGG+MY+FVGK+APFLILSALALGDGLLQLL+LQP VV  E EPP+LKSL+ DPYI++A
Sbjct: 240 PFGGVMYEFVGKSAPFLILSALALGDGLLQLLMLQPSVVYTEAEPPSLKSLITDPYIVLA 299

Query: 198 AGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR 257
           AGAITFAN GIAMLEPSLPIWMMDTMGA +W+QG +FLPASISYLIGTNLFGPLGH+MGR
Sbjct: 300 AGAITFANMGIAMLEPSLPIWMMDTMGASRWKQGATFLPASISYLIGTNLFGPLGHKMGR 359

Query: 258 YLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 317
           +LA+L+GL++IGICLM IPLAR+I+HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV
Sbjct: 360 WLASLIGLVVIGICLMCIPLARSIDHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 419

Query: 318 YGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE 377
           YGSVYAIGDVAFCLGFAIGPA+SGTLVN+IGFEWMLF IA+L+F+YAPL+Y LR PPTKE
Sbjct: 420 YGSVYAIGDVAFCLGFAIGPALSGTLVNSIGFEWMLFGIALLNFIYAPLMYFLRAPPTKE 479

Query: 378 EKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
           EKK           S +I EKSSVRY+TYQNEE+D 
Sbjct: 480 EKK-----------SLIIGEKSSVRYVTYQNEEEDQ 504

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725698|ref|XP_003401203.1| PREDICTED: synaptic vesicular amine transporter-like isoform 1 [Bombus terrestris] gi|340725700|ref|XP_003401204.1| PREDICTED: synaptic vesicular amine transporter-like isoform 2 [Bombus terrestris]

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/407 (78%), Positives = 363/407 (89%), Gaps = 11/407 (2%)

Query: 7   HLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTG 66
            L+  T +   +  RH+ L+ ET AVG+MF SKAFVQLLANP+VG LTH++GYS+PMFTG
Sbjct: 129 ELSSATEDPDEKAQRHRELLQETTAVGLMFASKAFVQLLANPIVGPLTHKIGYSIPMFTG 188

Query: 67  FVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL 126
           F+IMFLSTLIFAFGR+YG+LFLAR+LQGIGSSCSSVSGMGMLAERY DD+ERGNAMGIAL
Sbjct: 189 FIIMFLSTLIFAFGRSYGILFLARALQGIGSSCSSVSGMGMLAERYQDDKERGNAMGIAL 248

Query: 127 GGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLK 186
           GGLALGVLIGPPFGG MY+++GK+APFL+LSALALGDG+LQLL+LQP VV  E EPP+LK
Sbjct: 249 GGLALGVLIGPPFGGAMYEYIGKSAPFLVLSALALGDGILQLLVLQPSVVYTEAEPPSLK 308

Query: 187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN 246
           SLV DPYI +AAGAITFAN GIAMLEPSLPIWMMDTM A +W+QG +FLPASISYLIGTN
Sbjct: 309 SLVTDPYISLAAGAITFANMGIAMLEPSLPIWMMDTMDASRWEQGAAFLPASISYLIGTN 368

Query: 247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPEL 306
           LFGPLGHRMGR+LAAL+GL++IGICLM IPLA++I+HLIVPNAGLGFAIGMVDSSMMPEL
Sbjct: 369 LFGPLGHRMGRWLAALIGLVVIGICLMCIPLAKSIHHLIVPNAGLGFAIGMVDSSMMPEL 428

Query: 307 GYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366
           GYLVDIRHTAVYGSVYAIGDVAFCLGFA+GPA+SGTLVN+IGFEWMLF IAIL+F+YAPL
Sbjct: 429 GYLVDIRHTAVYGSVYAIGDVAFCLGFAVGPALSGTLVNSIGFEWMLFGIAILNFIYAPL 488

Query: 367 LYLLRNPPTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
           +Y LR PPTKEE+K           S +I EKSSVRY+TYQNEE++ 
Sbjct: 489 MYFLRAPPTKEEQK-----------SLIIGEKSSVRYVTYQNEEEEQ 524

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403795|ref|XP_003486906.1| PREDICTED: synaptic vesicular amine transporter-like [Bombus impatiens]

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/407 (78%), Positives = 362/407 (88%), Gaps = 11/407 (2%)

Query: 7   HLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTG 66
            +   T +   +  RH+ L+ ET AVG+MF SKAFVQLLANP+VG LTH++GYS+PMFTG
Sbjct: 129 EINSATEDPDEKAQRHRELLQETTAVGLMFASKAFVQLLANPIVGPLTHKIGYSIPMFTG 188

Query: 67  FVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL 126
           F+IMFLSTLIFAFGR+YG+LFLAR+LQGIGSSCSSVSGMGMLAERY DD+ERGNAMGIAL
Sbjct: 189 FIIMFLSTLIFAFGRSYGILFLARALQGIGSSCSSVSGMGMLAERYQDDKERGNAMGIAL 248

Query: 127 GGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLK 186
           GGLALGVLIGPPFGG MY++VGK+APFL+LSALALGDG+LQLL+LQP VV  E EPP+LK
Sbjct: 249 GGLALGVLIGPPFGGAMYEYVGKSAPFLVLSALALGDGILQLLVLQPSVVYTEAEPPSLK 308

Query: 187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN 246
           SLV DPYI +AAGAITFAN GIAMLEPSLPIWMMDTM A +W+QG +FLPASISYLIGTN
Sbjct: 309 SLVTDPYIGLAAGAITFANMGIAMLEPSLPIWMMDTMDASRWEQGAAFLPASISYLIGTN 368

Query: 247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPEL 306
           LFGPLGHRMGR+LAAL+GL++IGICLM IPLA++I+HLIVPNAGLGFAIGMVDSSMMPEL
Sbjct: 369 LFGPLGHRMGRWLAALIGLVVIGICLMCIPLAKSIHHLIVPNAGLGFAIGMVDSSMMPEL 428

Query: 307 GYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366
           GYLVDIRHTAVYGSVYAIGDVAFCLGFA+GPA+SGTLVN+IGFEWMLF IAIL+F+YAPL
Sbjct: 429 GYLVDIRHTAVYGSVYAIGDVAFCLGFAVGPALSGTLVNSIGFEWMLFGIAILNFIYAPL 488

Query: 367 LYLLRNPPTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
           +Y LR PPTKEE+K           S +I EKSSVRY+TYQNEE++ 
Sbjct: 489 MYFLRAPPTKEEQK-----------SLIIGEKSSVRYVTYQNEEEEQ 524

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482461|ref|XP_001608139.2| PREDICTED: synaptic vesicular amine transporter-like [Nasonia vitripennis]

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/409 (77%), Positives = 361/409 (88%), Gaps = 12/409 (2%)

Query: 6   SHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT 65
           + + +   E +  + RHK L  ET AVG+MF SKAFVQLLANP+VG LTH++GYS+PMFT
Sbjct: 108 TTINQTAAEILENKQRHKDLTEETVAVGMMFASKAFVQLLANPVVGPLTHKIGYSIPMFT 167

Query: 66  GFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIA 125
           GF+IMFLSTLIFAFGR+YG+LFLAR+LQGIGSSCSSVSGMGMLAERY DD+ERGNAMGIA
Sbjct: 168 GFIIMFLSTLIFAFGRSYGILFLARALQGIGSSCSSVSGMGMLAERYQDDKERGNAMGIA 227

Query: 126 LGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTL 185
           LGGLALGVLIGPPFGG+MY+FVGK+APFLILSALALGDGLLQLL+LQP VV  E EPP+L
Sbjct: 228 LGGLALGVLIGPPFGGLMYEFVGKSAPFLILSALALGDGLLQLLMLQPSVVYTEAEPPSL 287

Query: 186 KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT 245
           KSLV DPYIL+AAGAI+F N GIAMLEPSLP+WMMDTM A +W+QG +FLPASISYLIGT
Sbjct: 288 KSLVTDPYILLAAGAISFGNMGIAMLEPSLPLWMMDTMSASRWKQGATFLPASISYLIGT 347

Query: 246 NLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPE 305
           NLFGPLGHRMGR+LAA +GL++IG CLM IPLA++INHLI+PNAGLGFAIGMVDSSMMPE
Sbjct: 348 NLFGPLGHRMGRWLAACIGLVVIGFCLMAIPLAKSINHLILPNAGLGFAIGMVDSSMMPE 407

Query: 306 LGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP 365
           LGYLVDIRH+AVYGSVYAIGDVAFCLGFAIGPA+SGTLVNTIGFEWMLF IAIL+F YAP
Sbjct: 408 LGYLVDIRHSAVYGSVYAIGDVAFCLGFAIGPALSGTLVNTIGFEWMLFGIAILNFCYAP 467

Query: 366 LLYLLRNPPTKEEKKVGRQTLINEKSSTLINEKS-SVRYITYQNEEDDD 413
            +Y L+NPPTKEEKK           S ++ EKS SVRY+TY+NEE+D 
Sbjct: 468 FMYFLKNPPTKEEKK-----------SLIVGEKSPSVRYVTYENEEEDQ 505

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347971984|ref|XP_313775.4| AGAP004476-PA [Anopheles gambiae str. PEST] gi|333469117|gb|EAA09208.4| AGAP004476-PA [Anopheles gambiae str. PEST]

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/396 (79%), Positives = 356/396 (89%), Gaps = 11/396 (2%)

Query: 18  RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 77
           RE RHK L+ ET  VG+MF SKAFVQLLANP+VG LTH++GYS+PMF GFVIMF+STLIF
Sbjct: 128 REERHKELVEETVEVGLMFASKAFVQLLANPIVGPLTHKIGYSIPMFAGFVIMFISTLIF 187

Query: 78  AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGP 137
           AFGRTY VLFLAR+LQGIGSSCSSVSGMGMLA+RY DD+ERGNAMGIALGGLALGVLIGP
Sbjct: 188 AFGRTYSVLFLARALQGIGSSCSSVSGMGMLADRYTDDKERGNAMGIALGGLALGVLIGP 247

Query: 138 PFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIA 197
           PFGGIMY+FVGK+APFL+LSALALGDGLLQL++LQP VV +E +PP+LK+LV DPYI+IA
Sbjct: 248 PFGGIMYEFVGKSAPFLVLSALALGDGLLQLIMLQPSVVIEESDPPSLKALVTDPYIIIA 307

Query: 198 AGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR 257
           AGAITFAN GIAMLEPSLPIWMMD MGA +W+QGV+FLPASISYLIGTNLFGPLGHR+GR
Sbjct: 308 AGAITFANMGIAMLEPSLPIWMMDNMGASRWEQGVTFLPASISYLIGTNLFGPLGHRIGR 367

Query: 258 YLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 317
           +LAALLGL+IIG+CL+ IP+A +INHLI+PNAGLGFAIGMVDS MMPELGYLVDIRH+AV
Sbjct: 368 WLAALLGLVIIGLCLLCIPMATSINHLILPNAGLGFAIGMVDSCMMPELGYLVDIRHSAV 427

Query: 318 YGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE 377
           YGSVYAIGDVAFCLGFAIGPA+SGTLVNTIGFEWML  I+IL F YAPLL  LR PPTKE
Sbjct: 428 YGSVYAIGDVAFCLGFAIGPALSGTLVNTIGFEWMLVGISILCFAYAPLLTFLRAPPTKE 487

Query: 378 EKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
           EKK           S ++ E+SSVRY+TYQNEE+D+
Sbjct: 488 EKK-----------SLIVGERSSVRYVTYQNEEEDE 512

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328709288|ref|XP_003243921.1| PREDICTED: synaptic vesicular amine transporter-like isoform 2 [Acyrthosiphon pisum] gi|328709290|ref|XP_001945866.2| PREDICTED: synaptic vesicular amine transporter-like isoform 1 [Acyrthosiphon pisum]

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/400 (81%), Positives = 363/400 (90%), Gaps = 11/400 (2%)

Query: 14  EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLS 73
           E   ++ RH  L+ ET AVG+MF SKA VQL+ NP+VG LTHR+GYS+PMFTGF IMF+S
Sbjct: 90  EATLKKERHDDLVHETVAVGMMFASKAVVQLMVNPIVGPLTHRIGYSIPMFTGFFIMFIS 149

Query: 74  TLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV 133
           T+IFAFGR+YGVLFLAR+LQGIGSSCS+VSGMGMLAERYPDD+ERGNAMGIALGGLALGV
Sbjct: 150 TIIFAFGRSYGVLFLARALQGIGSSCSTVSGMGMLAERYPDDKERGNAMGIALGGLALGV 209

Query: 134 LIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPY 193
           LIGPPFGGIMY+FVGKTAPFLILSALALGDGLLQLLLLQPGVV  + +PP+LKSLVMDPY
Sbjct: 210 LIGPPFGGIMYEFVGKTAPFLILSALALGDGLLQLLLLQPGVVTTDADPPSLKSLVMDPY 269

Query: 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH 253
           I+IAAGAITFANTGIAMLEPSLPIWMMDTMGA +W+QGV+FLPASISYLIGTNLFGPLGH
Sbjct: 270 IIIAAGAITFANTGIAMLEPSLPIWMMDTMGAGRWKQGVTFLPASISYLIGTNLFGPLGH 329

Query: 254 RMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313
           RMGR+LAA++GL++IGICLM+IP AR+INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR
Sbjct: 330 RMGRWLAAMIGLIVIGICLMIIPTARDINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 389

Query: 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373
           HTAVYGSVYAIGDVAFCLG+ IGPA+SGTLVNTIGFEWMLF  A+L+F+YAPLLY LR+P
Sbjct: 390 HTAVYGSVYAIGDVAFCLGYTIGPALSGTLVNTIGFEWMLFGTAMLNFLYAPLLYFLRSP 449

Query: 374 PTKEEKKVGRQTLINEKSSTLINEKSSVRYITYQNEEDDD 413
           PTKEEKK           S +  EKSSVRYITYQNE +++
Sbjct: 450 PTKEEKK-----------SLVTGEKSSVRYITYQNEAEEE 478

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170043165|ref|XP_001849269.1| vesicular monoamine transporter [Culex quinquefasciatus] gi|167866583|gb|EDS29966.1| vesicular monoamine transporter [Culex quinquefasciatus]

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 314/397 (79%), Positives = 354/397 (89%), Gaps = 6/397 (1%)

Query: 18  RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 77
           RE RHK L+ ET  VG+MF SKAFVQLLANP+VG LTH++GYS+PMF GFVIMF+STLIF
Sbjct: 100 REERHKELVEETVEVGLMFASKAFVQLLANPIVGPLTHKIGYSIPMFAGFVIMFISTLIF 159

Query: 78  AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGP 137
           AFGRTY VLFLAR+LQGIGSSCSSVSGMGMLA+RY DD+ERGNAMGIALGGLALGVLIGP
Sbjct: 160 AFGRTYSVLFLARALQGIGSSCSSVSGMGMLADRYTDDKERGNAMGIALGGLALGVLIGP 219

Query: 138 PFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIA 197
           PFGGIMY+FVGK+APFLILSALALGDGLLQL++LQP +V +E +PP+LK+LVMDPYI++A
Sbjct: 220 PFGGIMYEFVGKSAPFLILSALALGDGLLQLVMLQPSMVIEESDPPSLKALVMDPYIIVA 279

Query: 198 AGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR 257
           AGAITFAN GIAMLEPSLPIWMMD MGA +W+QGV+FLPASISYLIGTNLFGPLGHR+GR
Sbjct: 280 AGAITFANMGIAMLEPSLPIWMMDNMGASRWEQGVTFLPASISYLIGTNLFGPLGHRIGR 339

Query: 258 YLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 317
           +LAALLGL+IIG+CL++IP+A +I+HLI+PNAGLGFAIGMVDS MMPELGYLVDIRHTAV
Sbjct: 340 WLAALLGLVIIGLCLLLIPMATSIHHLILPNAGLGFAIGMVDSCMMPELGYLVDIRHTAV 399

Query: 318 YGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE 377
           YGSVYAIGDVAFCLGFAIGPA+SGTLVNTIGFEWML  I+IL F+YAPLL +LR PPTKE
Sbjct: 400 YGSVYAIGDVAFCLGFAIGPALSGTLVNTIGFEWMLVGISILCFLYAPLLMMLRAPPTKE 459

Query: 378 EKKV-----GRQTLINEK-SSTLINEKSSVRYITYQN 408
           EKKV     G  TL N K SS ++ EK      T  N
Sbjct: 460 EKKVSGIDNGGLTLDNGKPSSAVVTEKQPPATTTTTN 496

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	414
FB|FBgn0260964	646	Vmat "Vesicular monoamine tran	0.876	0.561	0.639	2.4e-122
UNIPROTKB|I3L5W2	517	SLC18A2 "Uncharacterized prote	0.881	0.705	0.521	7.4e-98
UNIPROTKB|Q27963	517	SLC18A2 "Synaptic vesicular am	0.862	0.690	0.530	1.2e-97
UNIPROTKB|F1PD81	518	SLC18A2 "Uncharacterized prote	0.891	0.712	0.513	1.5e-97
UNIPROTKB|B0JYP2	517	SLC18A2 "Solute carrier family	0.862	0.690	0.527	3.2e-97
MGI|MGI:106677	517	Slc18a2 "solute carrier family	0.893	0.715	0.516	1.4e-96
UNIPROTKB|Q05940	514	SLC18A2 "Synaptic vesicular am	0.881	0.710	0.510	1.2e-95
UNIPROTKB|F1P4R2	514	SLC18A2 "Uncharacterized prote	0.881	0.710	0.513	2e-95
RGD|3694	515	Slc18a2 "solute carrier family	0.881	0.708	0.513	2e-95
ZFIN|ZDB-GENE-080514-1	562	slc18a2 "solute carrier family	0.929	0.685	0.484	5.3e-95

FB|FBgn0260964 Vmat "Vesicular monoamine transporter" [Drosophila melanogaster (taxid:7227)]

 Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
 Identities = 232/363 (63%), Positives = 269/363 (74%)

Query:    19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA 78
             E RH  L+GET  VG++F SKAFVQLL NP+VG LTHR+GYS+PMF GFVIMFLST+IFA
Sbjct:   226 EERHNELVGETVEVGLLFASKAFVQLLVNPIVGPLTHRIGYSIPMFAGFVIMFLSTIIFA 285

Query:    79 FGRTYGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXXXXXXPP 138
             FGR+Y VLF+AR                MLA+R+ DD+ERGNAM              PP
Sbjct:   286 FGRSYLVLFVARALQGIGSSCSSVSGMGMLADRFTDDKERGNAMGIALGGLALGVLIGPP 345

Query:   139 FGGIMYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPTLKSLVMDPYILIAA 198
             FGG+MY+FVGK+APF                   P + K E EPP+LKSL+ DPYILIAA
Sbjct:   346 FGGVMYEFVGKSAPFLILAALALGDGLLQLFMLQPSIQKAETEPPSLKSLISDPYILIAA 405

Query:   199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY 258
             GAITFAN GIAMLEPSLP+WM+D MGA +W+QGV+FLPASISYLIGTNLFGPLGH++GR+
Sbjct:   406 GAITFANMGIAMLEPSLPLWMVDNMGATRWEQGVAFLPASISYLIGTNLFGPLGHKIGRW 465

Query:   259 XXXXXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318
                                A +I HLI+PNAGLGFAIGMVDSSMMPELGYLVDIRH+AVY
Sbjct:   466 FAACLGLIIIGGCLIFIPMATSITHLIIPNAGLGFAIGMVDSSMMPELGYLVDIRHSAVY 525

Query:   319 GSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEE 378
             GSVYA+GDVAFC+GFA+GPA+SG+LV +IGFEWMLF IAIL FMYAPLL LL+NPPT +E
Sbjct:   526 GSVYALGDVAFCVGFAVGPALSGSLVKSIGFEWMLFGIAILCFMYAPLLTLLKNPPTSDE 585

Query:   379 KKV 381
             KKV
Sbjct:   586 KKV 588

GO:0008021 "synaptic vesicle" evidence=ISS;IDA

GO:0016021 "integral to membrane" evidence=ISS

GO:0008504 "monoamine transmembrane transporter activity" evidence=ISS;IDA

GO:0006836 "neurotransmitter transport" evidence=ISS

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015842 "synaptic vesicle amine transport" evidence=IDA

GO:0005430 "synaptic vesicle amine transmembrane transporter activity" evidence=IDA

GO:0015844 "monoamine transport" evidence=IDA

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0015872 "dopamine transport" evidence=IMP

GO:0051608 "histamine transport" evidence=IMP

UNIPROTKB|I3L5W2 SLC18A2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
 Identities = 192/368 (52%), Positives = 238/368 (64%)

Query:    13 PEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 72
             P D  +E+  K L+ E   VG++F SKA VQLL NP +G+LT+R+GY +PMF GF IMF+
Sbjct:   117 PSDCPKED--KDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFAGFCIMFI 174

Query:    73 STLIFAFGRTYGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXX 132
             ST++FAF R+Y  L +AR                MLA  Y DD ERGNAM          
Sbjct:   175 STIMFAFSRSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMG 234

Query:   133 XXXXPPFGGIMYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKSLVMD 191
                 PPFG ++Y+FVGKTAPF                   P  V+ E +  T L +L+ D
Sbjct:   235 VLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLRD 294

Query:   192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251
             PYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPASISYLIGTN+FG L
Sbjct:   295 PYILIAAGSICFANMGIAMLEPALPIWMMETMCSPKWQLGVAFLPASISYLIGTNIFGIL 354

Query:   252 GHRMGRYXXXXXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311
              H+MGR+                   A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD
Sbjct:   355 AHKMGRWLCALLGMIIVGISILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVD 414

Query:   312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
             +RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL + LR
Sbjct:   415 LRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLR 474

Query:   372 NPPTKEEK 379
             +PP KEEK
Sbjct:   475 SPPAKEEK 482

GO:0016021 "integral to membrane" evidence=IEA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

UNIPROTKB|Q27963 SLC18A2 "Synaptic vesicular amine transporter" [Bos taurus (taxid:9913)]

 Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
 Identities = 190/358 (53%), Positives = 234/358 (65%)

Query:    23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT 82
             K L+ E   VG++F SKA VQLL NP +G+LT+R+GY +PMFTGF IMF+ST++FAF RT
Sbjct:   125 KDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFTGFCIMFISTVMFAFSRT 184

Query:    83 YGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXXXXXXPPFGGI 142
             Y  L +AR                MLA  Y DD ERGNAM              PPFG +
Sbjct:   185 YAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGVLVGPPFGSV 244

Query:   143 MYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKSLVMDPYILIAAGAI 201
             +Y+FVGKTAPF                   P  V+ E +  T L +L+ DPYILIAAG+I
Sbjct:   245 LYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLRDPYILIAAGSI 304

Query:   202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYXXX 261
              FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPAS+SYLIGTN+FG L H+MGR+   
Sbjct:   305 CFANMGIAMLEPALPIWMMETMCSHKWQLGVAFLPASVSYLIGTNVFGILAHKMGRWLCA 364

Query:   262 XXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV 321
                             A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD+RH +VYGSV
Sbjct:   365 LLGMIIVGMSILCIPLAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSV 424

Query:   322 YAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEK 379
             YAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL + LR+PP KEEK
Sbjct:   425 YAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRSPPAKEEK 482

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006836 "neurotransmitter transport" evidence=IEA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

UNIPROTKB|F1PD81 SLC18A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
 Identities = 191/372 (51%), Positives = 238/372 (63%)

Query:     9 TEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFV 68
             T   P D  RE+  K L+ E   VG++F SKA +QLL NP +G+LT+R+GY +PMF GF 
Sbjct:   114 TSAAPPDCPRED--KALLNENVQVGLLFASKATIQLLTNPFIGLLTNRIGYPIPMFAGFC 171

Query:    69 IMFLSTLIFAFGRTYGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXX 128
             IMF+ST++FAF  +Y  L +AR                MLA  Y DD ERGNAM      
Sbjct:   172 IMFVSTIMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGG 231

Query:   129 XXXXXXXXPPFGGIMYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKS 187
                     PPFG ++Y+FVGKTAPF                   P  V+ E +  T L +
Sbjct:   232 LAMGVLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLCVLQPSRVQPESQKGTPLTT 291

Query:   188 LVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNL 247
             L+ DPYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ G++FLPASISYLIGTN+
Sbjct:   292 LLKDPYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGIAFLPASISYLIGTNI 351

Query:   248 FGPLGHRMGRYXXXXXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELG 307
             FG L H+MGR+                   A+NI  LI PN G+GFAIGMVDSSMMP +G
Sbjct:   352 FGMLAHKMGRWLCALLGMIIVGISILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMG 411

Query:   308 YLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL 367
             YLVD+RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL 
Sbjct:   412 YLVDLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLC 471

Query:   368 YLLRNPPTKEEK 379
             + LR+PP KEEK
Sbjct:   472 FFLRSPPAKEEK 483

GO:0016021 "integral to membrane" evidence=IEA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

UNIPROTKB|B0JYP2 SLC18A2 "Solute carrier family 18 (Vesicular monoamine), member 2" [Bos taurus (taxid:9913)]

 Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
 Identities = 189/358 (52%), Positives = 234/358 (65%)

Query:    23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT 82
             K L+ E   VG++F SKA VQLL NP +G+LT+R+GY +PMFTGF IMF+ST++FAF R+
Sbjct:   125 KDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFTGFCIMFISTVMFAFSRS 184

Query:    83 YGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXXXXXXPPFGGI 142
             Y  L +AR                MLA  Y DD ERGNAM              PPFG +
Sbjct:   185 YAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGVLVGPPFGSV 244

Query:   143 MYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKSLVMDPYILIAAGAI 201
             +Y+FVGKTAPF                   P  V+ E +  T L +L+ DPYILIAAG+I
Sbjct:   245 LYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLRDPYILIAAGSI 304

Query:   202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYXXX 261
              FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPAS+SYLIGTN+FG L H+MGR+   
Sbjct:   305 CFANMGIAMLEPALPIWMMETMCSHKWQLGVAFLPASVSYLIGTNVFGILAHKMGRWLCA 364

Query:   262 XXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV 321
                             A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD+RH +VYGSV
Sbjct:   365 LLGMIIVGMSILCIPLAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSV 424

Query:   322 YAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEK 379
             YAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL + LR+PP KEEK
Sbjct:   425 YAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRSPPAKEEK 482

GO:0016265 "death" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0001975 "response to amphetamine" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

MGI|MGI:106677 Slc18a2 "solute carrier family 18 (vesicular monoamine), member 2" [Mus musculus (taxid:10090)]

 Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
 Identities = 193/374 (51%), Positives = 239/374 (63%)

Query:     8 LTEIT-PEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTG 66
             +T  T P D   E+  K L+ E   VG++F SKA VQLL NP +G+LT+R+GY +PMF G
Sbjct:   111 VTNTTVPPDCPSED--KDLLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFAG 168

Query:    67 FVIMFLSTLIFAFGRTYGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXX 126
             F IMF+ST++FAF  +Y  L +AR                MLA  Y DD ERGNAM    
Sbjct:   169 FCIMFISTVMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIAL 228

Query:   127 XXXXXXXXXXPPFGGIMYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-L 185
                       PPFG ++Y+FVGKTAPF                   P  V+ E +  T L
Sbjct:   229 GGLAMGVLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPL 288

Query:   186 KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT 245
              +L+ DPYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPASISYLIGT
Sbjct:   289 TTLLKDPYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGT 348

Query:   246 NLFGPLGHRMGRYXXXXXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPE 305
             N+FG L H+MGR+                   A+NI  LI PN G+GFAIGMVDSSMMP 
Sbjct:   349 NIFGILAHKMGRWLCALLGMIVVGISILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPI 408

Query:   306 LGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP 365
             +GYLVD+RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++AP
Sbjct:   409 MGYLVDLRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDIVFAP 468

Query:   366 LLYLLRNPPTKEEK 379
             L + LR+PP KEEK
Sbjct:   469 LCFFLRSPPAKEEK 482

GO:0001975 "response to amphetamine" evidence=IMP

GO:0005275 "amine transmembrane transporter activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006836 "neurotransmitter transport" evidence=ISO

GO:0006837 "serotonin transport" evidence=ISO

GO:0006855 "drug transmembrane transport" evidence=IEA

GO:0007568 "aging" evidence=ISO

GO:0007626 "locomotory behavior" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=ISO

GO:0008144 "drug binding" evidence=ISO

GO:0009636 "response to toxic substance" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0015222 "serotonin transmembrane transporter activity" evidence=ISO

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0015842 "synaptic vesicle amine transport" evidence=ISO

GO:0015844 "monoamine transport" evidence=ISO

GO:0015893 "drug transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016265 "death" evidence=IMP

GO:0019899 "enzyme binding" evidence=ISO

GO:0030073 "insulin secretion" evidence=ISO

GO:0030672 "synaptic vesicle membrane" evidence=ISO

GO:0031045 "dense core granule" evidence=ISO

GO:0031072 "heat shock protein binding" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0035690 "cellular response to drug" evidence=ISO

GO:0042593 "glucose homeostasis" evidence=ISO

GO:0042995 "cell projection" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043195 "terminal bouton" evidence=ISO

GO:0043679 "axon terminus" evidence=ISO

GO:0044297 "cell body" evidence=ISO

GO:0051589 "negative regulation of neurotransmitter transport" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q05940 SLC18A2 "Synaptic vesicular amine transporter" [Homo sapiens (taxid:9606)]

 Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
 Identities = 188/368 (51%), Positives = 235/368 (63%)

Query:    13 PEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 72
             P D   E+  K L+ E   VG++F SKA VQL+ NP +G+LT+R+GY +P+F GF IMF+
Sbjct:   114 PSDCPSED--KDLLNENVQVGLLFASKATVQLITNPFIGLLTNRIGYPIPIFAGFCIMFV 171

Query:    73 STLIFAFGRTYGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXX 132
             ST++FAF  +Y  L +AR                MLA  Y DD ERGN M          
Sbjct:   172 STIMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNVMGIALGGLAMG 231

Query:   133 XXXXPPFGGIMYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKSLVMD 191
                 PPFG ++Y+FVGKTAPF                   P  V+ E +  T L +L+ D
Sbjct:   232 VLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLKD 291

Query:   192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251
             PYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPASISYLIGTN+FG L
Sbjct:   292 PYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGIL 351

Query:   252 GHRMGRYXXXXXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311
              H+MGR+                   A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD
Sbjct:   352 AHKMGRWLCALLGMIIVGVSILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVD 411

Query:   312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
             +RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D ++APL + LR
Sbjct:   412 LRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLR 471

Query:   372 NPPTKEEK 379
             +PP KEEK
Sbjct:   472 SPPAKEEK 479

GO:0001975 "response to amphetamine" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0008144 "drug binding" evidence=IEA

GO:0009635 "response to herbicide" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010043 "response to zinc ion" evidence=IEA

GO:0015222 "serotonin transmembrane transporter activity" evidence=IEA

GO:0016265 "death" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0030073 "insulin secretion" evidence=IEA

GO:0030672 "synaptic vesicle membrane" evidence=IEA

GO:0031045 "dense core granule" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0032456 "endocytic recycling" evidence=IEA

GO:0035690 "cellular response to drug" evidence=IEA

GO:0042220 "response to cocaine" evidence=IEA

GO:0042593 "glucose homeostasis" evidence=IEA

GO:0042594 "response to starvation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043195 "terminal bouton" evidence=IEA

GO:0051412 "response to corticosterone stimulus" evidence=IEA

GO:0051589 "negative regulation of neurotransmitter transport" evidence=IEA

GO:0071242 "cellular response to ammonium ion" evidence=IEA

GO:0016020 "membrane" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0008504 "monoamine transmembrane transporter activity" evidence=TAS

GO:0015844 "monoamine transport" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007269 "neurotransmitter secretion" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0070083 "clathrin-sculpted monoamine transport vesicle membrane" evidence=TAS

UNIPROTKB|F1P4R2 SLC18A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 189/368 (51%), Positives = 236/368 (64%)

Query:    13 PEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 72
             P D  +E+  K L+ E   VG++F SKA VQL+ NP +G LT+R+GY +P+F GF IMF+
Sbjct:   113 PPDCPKED--KDLLNENVQVGLLFASKATVQLITNPFIGPLTNRIGYQIPLFAGFCIMFV 170

Query:    73 STLIFAFGRTYGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXX 132
             ST++FAF  +Y +LF+AR                MLA  Y DD ERGNAM          
Sbjct:   171 STIMFAFSGSYTLLFIARSLQGVGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMG 230

Query:   133 XXXXPPFGGIMYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKSLVMD 191
                 PPFG IMY+FVGK++PF                   P   + E +  T L +L+ D
Sbjct:   231 VLVGPPFGSIMYEFVGKSSPFLVLAALALFDGAVQLLVLQPSRAQAESQKGTPLLTLMKD 290

Query:   192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251
             PYI+IAAG+I FAN  IAMLEP+LPIWMM+TM + KWQ GV+FLPASISYLIGTNLFG L
Sbjct:   291 PYIIIAAGSICFANMAIAMLEPALPIWMMETMCSKKWQLGVAFLPASISYLIGTNLFGIL 350

Query:   252 GHRMGRYXXXXXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311
              H+MGR+                   A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD
Sbjct:   351 AHKMGRWLCALLGMLIVGISILCVPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVD 410

Query:   312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
             +RH +VYGSVYAI DVAFC+GFAIGP+  G +   IGF W++ II I+D ++APL + LR
Sbjct:   411 LRHVSVYGSVYAIADVAFCMGFAIGPSAGGAIAKAIGFPWLMTIIGIVDILFAPLCFFLR 470

Query:   372 NPPTKEEK 379
             +PP KEEK
Sbjct:   471 SPPAKEEK 478

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0001975 "response to amphetamine" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0016265 "death" evidence=IEA

RGD|3694 Slc18a2 "solute carrier family 18 (vesicular monoamine), member 2" [Rattus norvegicus (taxid:10116)]

 Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
 Identities = 189/368 (51%), Positives = 233/368 (63%)

Query:    13 PEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFL 72
             P D   E+R   L+ E   VG++F SKA VQLL NP +G+LT+R+GY +PMF GF IMF+
Sbjct:   115 PSDCPSEDRD--LLNENVQVGLLFASKATVQLLTNPFIGLLTNRIGYPIPMFAGFCIMFI 172

Query:    73 STLIFAFGRTYGVLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXX 132
             ST++FAF  +Y  L +AR                MLA  Y DD ERG  M          
Sbjct:   173 STVMFAFSSSYAFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGKPMGIALGGLAMG 232

Query:   133 XXXXPPFGGIMYQFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKSLVMD 191
                 PPFG ++Y+FVGKTAPF                   P  V+ E +  T L +L+ D
Sbjct:   233 VLVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKGTPLTTLLKD 292

Query:   192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251
             PYILIAAG+I FAN GIAMLEP+LPIWMM+TM + KWQ GV+FLPASISYLIGTN+FG L
Sbjct:   293 PYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNIFGIL 352

Query:   252 GHRMGRYXXXXXXXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311
              H+MGR+                   A+NI  LI PN G+GFAIGMVDSSMMP +GYLVD
Sbjct:   353 AHKMGRWLCALLGMVIVGISILCIPFAKNIYGLIAPNFGVGFAIGMVDSSMMPIMGYLVD 412

Query:   312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
             +RH +VYGSVYAI DVAFC+G+AIGP+  G +   IGF W++ II I+D  +APL + LR
Sbjct:   413 LRHVSVYGSVYAIADVAFCMGYAIGPSAGGAIAKAIGFPWLMTIIGIIDIAFAPLCFFLR 472

Query:   372 NPPTKEEK 379
             +PP KEEK
Sbjct:   473 SPPAKEEK 480

GO:0001975 "response to amphetamine" evidence=IEP;ISO

GO:0005275 "amine transmembrane transporter activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006836 "neurotransmitter transport" evidence=IDA

GO:0006837 "serotonin transport" evidence=IDA

GO:0007568 "aging" evidence=IDA

GO:0007626 "locomotory behavior" evidence=IEA;ISO

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0008144 "drug binding" evidence=IPI

GO:0009635 "response to herbicide" evidence=IEP

GO:0009636 "response to toxic substance" evidence=ISO

GO:0009791 "post-embryonic development" evidence=IEA;ISO

GO:0010038 "response to metal ion" evidence=IEP

GO:0010043 "response to zinc ion" evidence=IEP

GO:0015222 "serotonin transmembrane transporter activity" evidence=IDA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0015842 "synaptic vesicle amine transport" evidence=IMP;TAS

GO:0015844 "monoamine transport" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016265 "death" evidence=IEA;ISO

GO:0019899 "enzyme binding" evidence=IPI

GO:0030073 "insulin secretion" evidence=IDA

GO:0030672 "synaptic vesicle membrane" evidence=IDA

GO:0031045 "dense core granule" evidence=IDA

GO:0031072 "heat shock protein binding" evidence=IPI

GO:0032456 "endocytic recycling" evidence=IEP

GO:0035690 "cellular response to drug" evidence=IDA

GO:0042220 "response to cocaine" evidence=IEP

GO:0042493 "response to drug" evidence=IEP

GO:0042593 "glucose homeostasis" evidence=IDA

GO:0042594 "response to starvation" evidence=IEP

GO:0042995 "cell projection" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043195 "terminal bouton" evidence=IDA

GO:0043679 "axon terminus" evidence=IDA

GO:0044297 "cell body" evidence=IDA

GO:0051412 "response to corticosterone stimulus" evidence=IEP

GO:0051589 "negative regulation of neurotransmitter transport" evidence=IMP

GO:0071242 "cellular response to ammonium ion" evidence=IEP

ZFIN|ZDB-GENE-080514-1 slc18a2 "solute carrier family 18 (vesicular monoamine), member 2" [Danio rerio (taxid:7955)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 189/390 (48%), Positives = 244/390 (62%)

Query:    25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG 84
             L+ E   VG++F SKA VQL+ NP +G LT+R+GY +PMF GF IMF+ST++FAF  +Y 
Sbjct:   172 LLNENVKVGLLFASKATVQLITNPFIGPLTNRIGYQIPMFAGFCIMFVSTIMFAFSSSYT 231

Query:    85 VLFLARXXXXXXXXXXXXXXXXMLAERYPDDRERGNAMXXXXXXXXXXXXXXPPFGGIMY 144
             +LFLAR                MLA  Y DD ERGNA+              PPFG +MY
Sbjct:   232 LLFLARSLQGVGSSCSSVAGMGMLASVYTDDEERGNAIGIALGGLAMGVLVGPPFGSVMY 291

Query:   145 QFVGKTAPFXXXXXXXXXXXXXXXXXXXPGVVKQEVEPPT-LKSLVMDPYILIAAGAITF 203
             +FVGKTAPF                   P  V+ E +  T L +L+ DPYILIAAG+I F
Sbjct:   292 EFVGKTAPFLILAVLAVLDGALQLFVLQPSKVEPESQKGTSLITLMKDPYILIAAGSICF 351

Query:   204 ANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYXXXXX 263
             AN  IAMLEP+LPIWMM+TM   KWQ G++F+PASISYLIGTN+F  L H+MGR+     
Sbjct:   352 ANMAIAMLEPALPIWMMETMCPRKWQLGIAFVPASISYLIGTNIFAVLAHKMGRWLCSLI 411

Query:   264 XXXXXXXXXXXXXXARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYA 323
                           A++I  LIVPN G+GFAIGMVDSSMMP +GYLVD+RH +VYGSVYA
Sbjct:   412 GMLLVGISILCVPLAKDIYGLIVPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSVYA 471

Query:   324 IGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEKKVGR 383
             I DVAFC+GFA+GP+  G +  +IGF W++ II ++D M+APL + LRNPP  EEK    
Sbjct:   472 IADVAFCMGFALGPSAGGAIARSIGFPWLMTIIGLVDIMFAPLCFFLRNPPANEEK---- 527

Query:   384 QTLINEKSSTLINEKSSVRYITYQNEEDDD 413
               ++ + + ++     S +  +YQ  +D D
Sbjct:   528 MAILMDSNCSMKTRSYSTQGSSYQMGDDFD 557

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0015893 "drug transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BRU6	VMAT2_MOUSE	No assigned EC number	0.6440	0.8816	0.7059	yes	N/A
Q05940	VMAT2_HUMAN	No assigned EC number	0.5960	0.9589	0.7723	yes	N/A
Q01827	VMAT2_RAT	No assigned EC number	0.5923	0.9806	0.7883	yes	N/A
Q27963	VMAT2_BOVIN	No assigned EC number	0.6111	0.9541	0.7640	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	414
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	6e-34
TIGR00880	141	TIGR00880, 2_A_01_02, Multidrug resistance protein	4e-33
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	2e-26
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	2e-16
pfam13347	425	pfam13347, MFS_2, MFS/sugar transport protein	1e-11
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	3e-10
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	2e-09
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	4e-09
TIGR00710	385	TIGR00710, efflux_Bcr_CflA, drug resistance transp	1e-08
TIGR00890	377	TIGR00890, 2A0111, oxalate/formate antiporter fami	3e-07
TIGR00900	365	TIGR00900, 2A0121, H+ Antiporter protein	4e-07
TIGR00891	405	TIGR00891, 2A0112, putative sialic acid transporte	8e-04
PRK11652	394	PRK11652, emrD, multidrug resistance protein D; Pr	9e-04
TIGR00895	398	TIGR00895, 2A0115, benzoate transport	0.001
TIGR00899	375	TIGR00899, 2A0120, sugar efflux transporter	0.001
PRK11043	401	PRK11043, PRK11043, putative transporter; Provisio	0.004

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score =  129 bits (326), Expect = 6e-34
 Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 25/342 (7%)

Query: 31  AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR 90
             G++  + +    L + L G L+ R G    +  G ++  L +L+ AF  +  +L + R
Sbjct: 35  QAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGR 94

Query: 91  SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 150
            L G+G      +   ++AE +P  +ERG A+G+   G  LG L+GP  GG++ + +G  
Sbjct: 95  FLLGLGGGALYPAAAALIAEWFP-PKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWR 153

Query: 151 APFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAM 210
             FLIL+ L L   LL L LL                      +L+ A A    + G   
Sbjct: 154 WLFLILAILGLLLALLLLFLL--------------------RLLLLLALAFFLLSFGYYG 193

Query: 211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALL-GLLIIG 269
           L   LP+++ + +G    + G+      +  ++G  L G L  R+GR    LL GLL+  
Sbjct: 194 LLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAA 253

Query: 270 ICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF 329
           + L+++ LA ++  L+V    LGF +G    +++       ++      G+   + +   
Sbjct: 254 LGLLLLALAPSLALLLVALLLLGFGLGFAFPALLT---LASELAPPEARGTASGLFNTFG 310

Query: 330 CLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
            LG A+GP ++G L++T G+  +  I+A L  + A LL LL 
Sbjct: 311 SLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein

 Score =  121 bits (305), Expect = 4e-33
 Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 1/141 (0%)

Query: 33  GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 92
           G++    A  QL+ +PL G+LT R G    +  G  I  LST +FA      VL +AR L
Sbjct: 1   GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFL 60

Query: 93  QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAP 152
           QG G++ + V+G  ++A+ YP + ERG A+G+   G+ALG L+GPP GG++ QF+G  AP
Sbjct: 61  QGFGAAFALVAGAALIADIYPPE-ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAP 119

Query: 153 FLILSALALGDGLLQLLLLQP 173
           FL L+ LAL   +L   LL  
Sbjct: 120 FLFLAILALAAFILLAFLLPE 140

Length = 141

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score =  108 bits (272), Expect = 2e-26
 Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 19/320 (5%)

Query: 31  AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR 90
            +G++  + +    LA PL G L+ R G    +  G ++  L  L+  F  +  +L + R
Sbjct: 33  EIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLR 92

Query: 91  SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 150
            LQG+G      +   ++A+ +P   ERG A+G+   G  LG  +GP  GG++    G  
Sbjct: 93  VLQGLGGGALFPAAAALIADWFP-PEERGRALGLLSAGFGLGAALGPLLGGLLASLFGWR 151

Query: 151 APFLILSALALGDGLLQLLLLQPGVVKQEVEPPT----------LKSLVMDPYILIAAGA 200
           A FLIL+ LAL   +L  LLL     + +   P            K L+ DP + +    
Sbjct: 152 AAFLILAILALLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPAWKLLLRDPVLWLLLAL 211

Query: 201 ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY-- 258
           + F       L   LP++  + +G      G+    A +   IG  L G L  R+GR   
Sbjct: 212 LLFG-FAFFALLTYLPLY-QEVLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRR 269

Query: 259 -LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 317
            L ALL L++  + L ++ L  +   L+V    LGF  G+V  ++      + D+     
Sbjct: 270 LLLALLLLILAALGLALLSLTESSLWLLVALLLLGFGAGLVFPALN---ALVSDLAPKEE 326

Query: 318 YGSVYAIGDVAFCLGFAIGP 337
            G+   + + A  LG A+GP
Sbjct: 327 RGTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 82/335 (24%), Positives = 130/335 (38%), Gaps = 11/335 (3%)

Query: 29  TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFL 88
             A G +  + A    L  PL+ +LT R+     +     +  +S L+ A   ++ VL L
Sbjct: 47  EGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLL 106

Query: 89  ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 148
           AR+L G+           + A   P  + RG A+ +   GL L  ++G P G  + Q  G
Sbjct: 107 ARALAGLAHGVFWSIAAALAARLVPPGK-RGRALALVFTGLTLATVLGVPLGTFLGQLFG 165

Query: 149 KTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPP--TLKSLVMDPYILIAAGAITFANT 206
             A FL ++ LAL   LL   LL P  +   +  P  TL  L+  P +L+   A     T
Sbjct: 166 WRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMT 225

Query: 207 GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL 266
           G   L   +  ++    G       +  L   I+  IG  L G L  R  R       LL
Sbjct: 226 GHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLL 285

Query: 267 IIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA--VYGSVYAI 324
           +    L +     +    +      GFA            G    +   A        ++
Sbjct: 286 LALALLALTFTGASPALALALLFLWGFAFS------PALQGLQTRLARLAPDAADLAGSL 339

Query: 325 GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAIL 359
              AF LG A+G A+ G +++ +G+    ++ A L
Sbjct: 340 NVAAFNLGIALGAALGGLVLDALGYAATGWVGAAL 374

Length = 394

>gnl|CDD|222060 pfam13347, MFS_2, MFS/sugar transport protein

 Score = 65.7 bits (161), Expect = 1e-11
 Identities = 66/353 (18%), Positives = 129/353 (36%), Gaps = 38/353 (10%)

Query: 31  AVGVMFGSKAFVQLLANPLVGILTHR------------VGYSLPMFTGFVIMFLSTLIFA 78
           AVG +F          +P+VG +  R            +  ++P+    V++F +    +
Sbjct: 36  AVGTIFLVARIWDAFTDPIVGAIIDRTRTRWGKFRPWLLIGAIPLAISLVLLFATPFGLS 95

Query: 79  FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPP 138
                   F+   L G+  +  ++    ++     D +ER +       G  +G L+   
Sbjct: 96  MTAKLIYAFITYILLGLAYTFVNIPYWSLIPVLTRDPKERTSLASYRRIGATIGGLLVAV 155

Query: 139 FGGIMYQFVGKTAPFLILSALALGDGLLQLLLL---------QPGVVKQEVEPPTL---- 185
               +   +G           AL   +L ++           +  V  ++ E  +L    
Sbjct: 156 IAPPLVALLGGGNGAKGYFLAALIIAILAVVGFLICFAGTKERVSVPPEQKEKVSLRDMF 215

Query: 186 KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT 245
           K+L  +  +LI           +A+    L  +    +G       V  L  +I+ ++G 
Sbjct: 216 KALFKNRPLLILLLLYLLNALAMAVRNGLLLYYFTYVLGNAGL-FSVLLLIGTIAAILGA 274

Query: 246 NLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMM 303
            L+  L  R G+    LLG+L+  I L+++      ++   +V     G  +G+      
Sbjct: 275 PLWPWLAKRFGKKRTFLLGMLLAAIGLVLLFFLPPGSLWLFLVLVVLAGIGLGLATLLPW 334

Query: 304 PELGYLVD-------IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349
             L  +VD        R   +  S+Y+  D    LG A+G A+ G L+   G+
Sbjct: 335 AMLADVVDYGEWKTGKRREGITFSLYSFADK---LGGALGGAIVGLLLAFAGY 384

This family is part of the major facilitator superfamily of membrane transport proteins. Length = 425

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 60.9 bits (148), Expect = 3e-10
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 3/181 (1%)

Query: 200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYL 259
           A   A  G ++L P+LP+++ + +G    + G+     S+ Y +   L G L  R GR  
Sbjct: 4   AAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRR 63

Query: 260 AALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYG 319
             L+GLL+  + L+++  A ++  L+V     G   G +  +       + D       G
Sbjct: 64  VLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAA---ALIADWFPPEERG 120

Query: 320 SVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEEK 379
               +    F LG A+GP + G L +  G+     I+AIL  + A L  LL   P  E K
Sbjct: 121 RALGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALLLPRPPPESK 180

Query: 380 K 380
           +
Sbjct: 181 R 181

Length = 346

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 4/178 (2%)

Query: 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH 253
           +L+       +     +L P+LP+   D +G    Q G+     S+ Y +G+ L G L  
Sbjct: 1   LLLLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSD 59

Query: 254 RMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313
           R GR    LLGLL+  +  +++  A ++  L+V    LG   G +  +       + +  
Sbjct: 60  RFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAA---ALIAEWF 116

Query: 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
                G    +    F LG  +GP + G L  ++G+ W+  I+AIL  + A LL  L 
Sbjct: 117 PPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL 174

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 76/377 (20%), Positives = 132/377 (35%), Gaps = 50/377 (13%)

Query: 33  GVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 92
           G +F + ++  ++     G L  R G    +    VI  + T + AF   Y  L++ R L
Sbjct: 32  GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVL 91

Query: 93  QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAP 152
            G   +      + ++A  +P   ER  A+ I      LG +IG P  G +         
Sbjct: 92  LGAAEAPFFPGIILIVASWFP-ASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWA 150

Query: 153 FLILSALALGDGLLQLLLLQP-------------------------GVVKQEVEPPTLKS 187
           F+I   L +  G+L L  +                           G      +   +K 
Sbjct: 151 FIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKE 210

Query: 188 LVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNL 247
           L+ D  +   A      N G+       P +++   G    + G       I   IG  L
Sbjct: 211 LLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMIL 270

Query: 248 FGPL--------GHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGF---AIG 296
            G L           +     A++  L++ + +       NI +  +    LGF     G
Sbjct: 271 GGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYV-NIPYAALALVALGFFGLGAG 329

Query: 297 MVDSSMMPEL--GYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWML 353
            +  +++ +   G +         G + ++G     LG  +GP + G +  T G F   L
Sbjct: 330 AIGWALISDNAPGNIA----GLTGGLINSLG----NLGGIVGPIVIGAIAATTGSFAGAL 381

Query: 354 FIIAILDFMYAPLLYLL 370
            ++A L  +   L YLL
Sbjct: 382 MVVAALA-LIGALSYLL 397

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|233099 TIGR00710, efflux_Bcr_CflA, drug resistance transporter, Bcr/CflA subfamily

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 75/313 (23%), Positives = 110/313 (35%), Gaps = 21/313 (6%)

Query: 49  LVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGML 108
           L G L+ R G    +  G  I  LS+L  A       L + R +Q  G+S  SV    ++
Sbjct: 59  LWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALV 118

Query: 109 AERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQL 168
            + YP + E      I +  LAL   + P  GG +  ++   A F  LS   +    L  
Sbjct: 119 RDIYPGE-ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIF 177

Query: 169 LLLQPGVVKQEVEPP------TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDT 222
            +L P  +  E          T   L+        A     +  G        P   +D 
Sbjct: 178 FIL-PETLPYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDI 236

Query: 223 MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY--LAALLGLLIIGICLMMIPLARN 280
           MG      G+ F    I+ + G  L G    + G    L   L L  +   L+ I     
Sbjct: 237 MGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG 296

Query: 281 ---INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGP 337
                 +I P   +G    M+ S  M     L D  H A  G+  A+      L   +G 
Sbjct: 297 LGSWAMIIGPMMFVGIGNSMISSIAMA--YALEDFPHVA--GTASAL---FGTLRLVLG- 348

Query: 338 AMSGTLVNTIGFE 350
           A+ G LV+ I   
Sbjct: 349 AIVGYLVSLIHGN 361

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. Length = 385

>gnl|CDD|233171 TIGR00890, 2A0111, oxalate/formate antiporter family transporter

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 64/350 (18%), Positives = 120/350 (34%), Gaps = 25/350 (7%)

Query: 31  AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR 90
           AV + F        ++ P+ G+L  + G       G ++  L    +A   +   L+L  
Sbjct: 39  AVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98

Query: 91  SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 150
            L   G   +    +    + +PD  +RG A GI +GG  LG  I  P    +    G  
Sbjct: 99  GLASAGVGIAYGIALNTAVKWFPD--KRGLASGIIIGGYGLGSFILSPLITSVINLEGVP 156

Query: 151 APFLILSALALGDGLLQLLLL-------QPGVVKQE---VEPPTLKSLVMDP-YILIAAG 199
           A F+ +  + L   L+ +L            +       V+  T+  ++  P + ++   
Sbjct: 157 AAFIYMGIIFL---LVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLS 213

Query: 200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYL 259
               A +G+ ++    P      +        VS     I    G    G L  ++GR  
Sbjct: 214 FFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISS--IFNGGGRPFLGALSDKIGRQK 271

Query: 260 AALLGLLIIGICLMMIPLARNIN--HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 317
              +   I  + +  +     +N    +   A + F  G   S     +  +    ++A 
Sbjct: 272 TMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAA 331

Query: 318 -YGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366
            YG +Y     A  +    G  ++   +  IGFE+   +          L
Sbjct: 332 NYGFLYT----AKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSLAL 377

This subfamily belongs to the major facilitator family. Members include the oxalate/formate antiporter of Oxalobacter formigenes, where one substrate is decarboxylated in the cytosol into the other to consume a proton and drive an ion gradient [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 377

>gnl|CDD|162098 TIGR00900, 2A0121, H+ Antiporter protein

 Score = 51.2 bits (123), Expect = 4e-07
 Identities = 41/230 (17%), Positives = 82/230 (35%), Gaps = 15/230 (6%)

Query: 131 LGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT------ 184
           L  ++GP  GG+MY  +G      + +       LL + +  P +   E++  +      
Sbjct: 139 LFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRD 198

Query: 185 ----LKSLVMDPYILI-AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASI 239
               +K ++ +P +      A+ F       +    P      +G      G       +
Sbjct: 199 TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGL 258

Query: 240 SYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLI-VPNAGLGFAIGMV 298
             L+G  L G LG    R       + +IG+ ++++ L      L  V    +G   G +
Sbjct: 259 GALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPI 318

Query: 299 DSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG 348
               +P+   L       + G V+          + +G  ++G L + +G
Sbjct: 319 ---NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 365

>gnl|CDD|233172 TIGR00891, 2A0112, putative sialic acid transporter

 Score = 41.0 bits (96), Expect = 8e-04
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 5/120 (4%)

Query: 29  TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFL 88
           T     +  +    +     + G+   R G  LPM T  V+    TL   F   Y  +F+
Sbjct: 46  TVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFI 105

Query: 89  ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG 148
           AR + GIG      S    + E +P    R  A G+ + G A+G +        +Y  V 
Sbjct: 106 ARLVIGIGMGGEYGSSAAYVIESWPKHL-RNKASGLLISGYAVGAV----VAAQVYSLVV 160

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 405

>gnl|CDD|183259 PRK11652, emrD, multidrug resistance protein D; Provisional

 Score = 41.0 bits (97), Expect = 9e-04
 Identities = 66/267 (24%), Positives = 97/267 (36%), Gaps = 35/267 (13%)

Query: 51  GILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAE 110
           G L+ RVG    +  G  I  L TL+  F  +  VL  A ++QG+G+        G++A 
Sbjct: 64  GPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVG-----GVMAR 118

Query: 111 RYPDDRERGNAMGIALGGLALGVLIGP---PF-GGIMYQFVGKTAPFLILSALALGDGLL 166
             P D   G  +  A   L +G+L+ P   P  GG++    G  A +L L  L  G    
Sbjct: 119 TLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178

Query: 167 QLLLLQPGVVKQEVEPPTLKS-------------LVMDPYILIAAGAITFANTGIAMLEP 213
               +             L S             L+M    LI     T A  GIA+ E 
Sbjct: 179 MARWMPETRPADARRTRVLASYRTLLSNRRFNCYLLM----LIG----TLA--GIAVFEA 228

Query: 214 SLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273
              + M   +G       + F+    +   G    G    R    +   +   ++   LM
Sbjct: 229 CSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLM 288

Query: 274 MIP---LARNINHLIVPNAGLGFAIGM 297
            IP      N+  L+VP A   F  GM
Sbjct: 289 WIPGWFGVMNVWTLLVPAALFFFGAGM 315

Length = 394

>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 15/150 (10%)

Query: 224 GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINH 283
           G D  Q G  F    I    G   FGPL  R+GR    L  +L+  +  ++  LA N+  
Sbjct: 48  GLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQ 107

Query: 284 LIVPNAGLGFAIGMVDSSMMPELGYLVD------IRHTAVYGSVYAIGDVAFCLGFAIGP 337
           L++     G  +G     +MP L  LV        R TAV   +   G   + +G A+G 
Sbjct: 108 LLILRFLAGLGLG----GLMPNLNALVSEYAPKRFRGTAV--GLMFCG---YPIGAAVGG 158

Query: 338 AMSGTLVNTIGFEWMLFIIAILDFMYAPLL 367
            ++G L+   G+  + ++  I   +   LL
Sbjct: 159 FLAGWLIPVFGWRSLFYVGGIAPLLLLLLL 188

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398

>gnl|CDD|129977 TIGR00899, 2A0120, sugar efflux transporter

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 58/283 (20%), Positives = 106/283 (37%), Gaps = 24/283 (8%)

Query: 31  AVGVMFGSKAFVQLLANPLVGILTHRVG--YSLPMFTGFVIMFLSTLIFAFGRTYGVL-F 87
            +G+ +   A V +  + L+   +   G    L +F   ++  L+ L+FA+ R Y +L  
Sbjct: 34  MIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFC-CLLAALACLLFAWNRNYFLLLV 92

Query: 88  LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAM--GIALGGLALGVLIGPPFGGIMYQ 145
           L   L    S+  +   +  LA  + D   R   M   +    ++L  +IGPP    +  
Sbjct: 93  LGVLLSSFAST--ANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL 150

Query: 146 FVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVM-------DPYILIAA 198
             G T  FL  +   +  G+L  L L P        P  L  L +       D  +L  A
Sbjct: 151 GFGFTVMFLTAALAFVLCGVLVWLFL-PSY--PRGAPGALTRLEVRGLLASRDTRLLFVA 207

Query: 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASIS----YLIGTNLFGPLGHR 254
             + +    + ++  ++P+ ++  +G      G+    A+       L+   L    G R
Sbjct: 208 CTLMWGCNILYII--NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR 265

Query: 255 MGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGM 297
               LAAL G+           L   +   ++    +G   G+
Sbjct: 266 RLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGI 308

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 375

>gnl|CDD|182924 PRK11043, PRK11043, putative transporter; Provisional

 Score = 39.1 bits (92), Expect = 0.004
 Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 33/219 (15%)

Query: 40  AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSC 99
           A  QLL  PL      R G    +  G  +  L +L   +  +   L + R +Q +G   
Sbjct: 55  ALGQLLWGPLS----DRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCS 110

Query: 100 SSVSGMGMLAERYPDDRERG---NAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLIL 156
           ++V    ++ +RYP  +        M +    +AL   + P  G  +    G  A F  L
Sbjct: 111 AAVIWQALVIDRYPAQKANRVFATIMPL----VALSPALAPLLGAWLLNHFGWQAIFATL 166

Query: 157 SALALGDGLLQL--LLLQPGVVKQEVEPPT------LKSLVMDPYILI--AAGAITFAN- 205
            A+ L   LL L  L L+P    ++           LKS      +LI  A  A  FA  
Sbjct: 167 FAITL---LLILPTLRLKPSKKARKQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWL 223

Query: 206 TGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIG 244
           TG        P  +++ MG      G+S++P +I++L+G
Sbjct: 224 TG-------SPF-ILEQMGYSPADIGLSYVPQTIAFLVG 254

Length = 401

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	414
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	100.0
PRK03545	390	putative arabinose transporter; Provisional	100.0
PRK09705	393	cynX putative cyanate transporter; Provisional	100.0
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	100.0
PRK10213	394	nepI ribonucleoside transporter; Reviewed	100.0
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	100.0
PRK10091	382	MFS transport protein AraJ; Provisional	100.0
PRK11663	434	regulatory protein UhpC; Provisional	100.0
PRK14995	495	methyl viologen resistance protein SmvA; Provision	100.0
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	100.0
TIGR00893	399	2A0114 d-galactonate transporter.	100.0
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	100.0
PRK03699	394	putative transporter; Provisional	100.0
KOG3764|consensus	464		100.0
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	100.0
PRK05122	399	major facilitator superfamily transporter; Provisi	100.0
PLN00028	476	nitrate transmembrane transporter; Provisional	100.0
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	100.0
TIGR00900	365	2A0121 H+ Antiporter protein.	100.0
PRK10642	490	proline/glycine betaine transporter; Provisional	100.0
PRK10489	417	enterobactin exporter EntS; Provisional	100.0
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	100.0
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	100.0
TIGR00892	455	2A0113 monocarboxylate transporter 1.	100.0
PRK10504	471	putative transporter; Provisional	100.0
PRK12307	426	putative sialic acid transporter; Provisional	100.0
PRK10473	392	multidrug efflux system protein MdtL; Provisional	100.0
PRK03633	381	putative MFS family transporter protein; Provision	100.0
PRK12382	392	putative transporter; Provisional	100.0
TIGR00897	402	2A0118 polyol permease family. This family of prot	100.0
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	100.0
PRK15403	413	multidrug efflux system protein MdtM; Provisional	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	100.0
PRK10406	432	alpha-ketoglutarate transporter; Provisional	100.0
PRK03893	496	putative sialic acid transporter; Provisional	100.0
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	100.0
PRK11646	400	multidrug resistance protein MdtH; Provisional	100.0
TIGR00891	405	2A0112 putative sialic acid transporter.	100.0
PRK09874	408	drug efflux system protein MdtG; Provisional	100.0
PRK11195	393	lysophospholipid transporter LplT; Provisional	100.0
PRK15011	393	sugar efflux transporter B; Provisional	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	100.0
PRK11043	401	putative transporter; Provisional	100.0
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	100.0
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	100.0
PRK15075	434	citrate-proton symporter; Provisional	100.0
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	100.0
PRK10133	438	L-fucose transporter; Provisional	100.0
PRK09952	438	shikimate transporter; Provisional	100.0
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	100.0
TIGR00896	355	CynX cyanate transporter. This family of proteins	100.0
KOG2532|consensus	466		100.0
PRK10054	395	putative transporter; Provisional	100.0
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	100.0
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	100.0
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	100.0
PRK10077	479	xylE D-xylose transporter XylE; Provisional	100.0
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	100.0
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	100.0
TIGR00898	505	2A0119 cation transport protein.	100.0
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	100.0
PRK11652	394	emrD multidrug resistance protein D; Provisional	100.0
PRK11010	491	ampG muropeptide transporter; Validated	100.0
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	100.0
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	100.0
PRK11902	402	ampG muropeptide transporter; Reviewed	100.0
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	100.0
PRK09528	420	lacY galactoside permease; Reviewed	100.0
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	100.0
KOG2504|consensus	509		100.0
KOG1330|consensus	493		100.0
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	100.0
TIGR00895	398	2A0115 benzoate transport.	100.0
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	100.0
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	100.0
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	100.0
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	100.0
TIGR00901	356	2A0125 AmpG-related permease.	99.98
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.98
KOG2533|consensus	495		99.98
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.97
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.97
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.97
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.97
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.97
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.96
KOG0569|consensus	485		99.96
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.96
TIGR00805	633	oat sodium-independent organic anion transporter.	99.96
PRK09669	444	putative symporter YagG; Provisional	99.96
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.95
KOG2615|consensus	451		99.95
PRK10429	473	melibiose:sodium symporter; Provisional	99.95
PTZ00207	591	hypothetical protein; Provisional	99.95
PRK09848	448	glucuronide transporter; Provisional	99.95
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.94
KOG0254|consensus	513		99.94
KOG0252|consensus	538		99.94
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.94
PF13347	428	MFS_2: MFS/sugar transport protein	99.94
KOG0255|consensus	521		99.94
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.94
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.94
PRK11462	460	putative transporter; Provisional	99.94
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.94
KOG0253|consensus	528		99.93
COG2211	467	MelB Na+/melibiose symporter and related transport	99.93
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.93
KOG4686|consensus	459		99.93
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.9
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.89
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.88
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.87
KOG2563|consensus	480		99.8
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.78
KOG2816|consensus	463		99.75
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.74
KOG3626|consensus	735		99.73
PRK10054	395	putative transporter; Provisional	99.7
KOG2325|consensus	488		99.69
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.69
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.69
PRK11663	434	regulatory protein UhpC; Provisional	99.68
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.68
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.68
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.66
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.66
TIGR00900	365	2A0121 H+ Antiporter protein.	99.66
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.65
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.65
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.63
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.63
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.63
PRK03545	390	putative arabinose transporter; Provisional	99.63
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.63
TIGR00895	398	2A0115 benzoate transport.	99.63
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.63
TIGR00891	405	2A0112 putative sialic acid transporter.	99.62
PRK10504	471	putative transporter; Provisional	99.61
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.61
PRK10489	417	enterobactin exporter EntS; Provisional	99.61
PRK10091	382	MFS transport protein AraJ; Provisional	99.61
TIGR00893	399	2A0114 d-galactonate transporter.	99.61
PRK05122	399	major facilitator superfamily transporter; Provisi	99.6
PRK09874	408	drug efflux system protein MdtG; Provisional	99.6
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.6
PRK12382	392	putative transporter; Provisional	99.59
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.59
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.59
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.59
PRK03699	394	putative transporter; Provisional	99.58
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.58
PRK11043	401	putative transporter; Provisional	99.58
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.58
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.58
PRK09528	420	lacY galactoside permease; Reviewed	99.58
PRK12307	426	putative sialic acid transporter; Provisional	99.57
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.56
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.56
PLN00028	476	nitrate transmembrane transporter; Provisional	99.56
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.56
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.56
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.55
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.55
PRK03893	496	putative sialic acid transporter; Provisional	99.55
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.54
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.54
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.54
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.53
PRK03633	381	putative MFS family transporter protein; Provision	99.52
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.52
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.52
PRK09705	393	cynX putative cyanate transporter; Provisional	99.52
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.52
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.51
PRK15011	393	sugar efflux transporter B; Provisional	99.5
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.5
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.49
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.49
KOG3762|consensus	618		99.49
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.49
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.47
KOG1330|consensus	493		99.47
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.47
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.45
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.45
PRK10133	438	L-fucose transporter; Provisional	99.44
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.42
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.42
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.42
PRK10642	490	proline/glycine betaine transporter; Provisional	99.41
PRK11010	491	ampG muropeptide transporter; Validated	99.41
PRK09952	438	shikimate transporter; Provisional	99.4
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.4
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.39
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.38
KOG3764|consensus	464		99.38
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.37
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.37
PRK11902	402	ampG muropeptide transporter; Reviewed	99.36
PTZ00207	591	hypothetical protein; Provisional	99.32
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.32
TIGR00898	505	2A0119 cation transport protein.	99.32
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.3
TIGR00805	633	oat sodium-independent organic anion transporter.	99.3
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.3
PRK15075	434	citrate-proton symporter; Provisional	99.3
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.28
KOG3098|consensus	461		99.28
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.27
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.27
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.27
TIGR00901	356	2A0125 AmpG-related permease.	99.25
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	99.24
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.24
KOG2615|consensus	451		99.24
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.24
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.23
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	99.21
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	99.21
KOG2532|consensus	466		99.2
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.18
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.15
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.12
KOG0637|consensus	498		99.1
KOG4332|consensus	454		99.09
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.07
COG0477	338	ProP Permeases of the major facilitator superfamil	99.06
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.03
KOG2504|consensus	509		99.02
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.99
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.99
KOG0254|consensus	513		98.98
KOG0255|consensus	521		98.98
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	98.97
KOG2533|consensus	495		98.97
KOG3574|consensus	510		98.96
KOG0569|consensus	485		98.94
PRK09669	444	putative symporter YagG; Provisional	98.92
PRK10429	473	melibiose:sodium symporter; Provisional	98.9
PRK09848	448	glucuronide transporter; Provisional	98.87
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.86
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.85
KOG4686|consensus	459		98.84
PF13347	428	MFS_2: MFS/sugar transport protein	98.83
PRK11462	460	putative transporter; Provisional	98.82
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.81
KOG3762|consensus	618		98.78
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.78
KOG0253|consensus	528		98.71
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.69
KOG3810|consensus	433		98.62
KOG2325|consensus	488		98.58
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	98.57
COG2211	467	MelB Na+/melibiose symporter and related transport	98.56
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	98.52
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.41
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	98.39
KOG0252|consensus	538		98.39
KOG2816|consensus	463		98.37
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	98.34
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	98.32
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.22
PF12832	77	MFS_1_like: MFS_1 like family	98.2
KOG1237|consensus	571		98.14
PF12832	77	MFS_1_like: MFS_1 like family	98.02
COG3202	509	ATP/ADP translocase [Energy production and convers	98.0
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	97.98
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	97.92
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	97.87
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	97.83
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	97.78
PRK03612	521	spermidine synthase; Provisional	97.72
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	97.7
COG0477	338	ProP Permeases of the major facilitator superfamil	97.66
KOG2563|consensus	480		97.66
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	97.6
KOG3626|consensus	735		97.59
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	97.56
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	97.48
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	97.27
KOG0637|consensus	498		96.98
PRK03612	521	spermidine synthase; Provisional	96.82
KOG3880|consensus	409		96.76
KOG1237|consensus	571		96.36
KOG1479|consensus	406		96.21
KOG3097|consensus	390		95.74
KOG4332|consensus	454		95.69
KOG2601|consensus	503		95.23
KOG3098|consensus	461		94.99
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	94.77
KOG1479|consensus	406		94.73
KOG2601|consensus	503		94.23
KOG3574|consensus	510		93.37
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	92.01
TIGR03644	404	marine_trans_1 probable ammonium transporter, mari	91.94
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	89.55
KOG3810|consensus	433		89.48
KOG4830|consensus	412		87.59
KOG3880|consensus	409		85.58
TIGR00836	403	amt ammonium transporter. The mechanism of energy	85.12
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	82.35
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	82.21
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	80.61

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.7e-42  Score=309.54  Aligned_cols=354  Identities=24%  Similarity=0.295  Sum_probs=308.3

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      .+|++++|+|.|..+.|++.|.|.+++.+++|+...+.||+.||++++....++.++++++++++||+.++++|++.|+.
T Consensus        35 LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a  114 (394)
T COG2814          35 LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLA  114 (394)
T ss_pred             chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC-C
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG-V  175 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~  175 (414)
                      .|.+++...++..+..|| ++|++++++...+..++.++|.+++.++.+.+|||.+|++.+.++++..+..+...|++ .
T Consensus       115 ~G~f~~i~~~~a~~lvpp-~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~  193 (394)
T COG2814         115 HGVFWSIAAALAARLVPP-GKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEI  193 (394)
T ss_pred             HHHHHHHHHHHHHHHcCc-cchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccC
Confidence            999999999999999996 99999999999999999999999999999999999999999999999999888888822 2


Q ss_pred             CCC-CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh
Q psy14075        176 VKQ-EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR  254 (414)
Q Consensus       176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~  254 (414)
                      +++ +.+..+..+.+|+|+++...+..++...+.+...+|+..++++..|+|....++.+..++++.++|+.+.|++.||
T Consensus       194 ~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr  273 (394)
T COG2814         194 SGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR  273 (394)
T ss_pred             CCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            221 1223357789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH
Q psy14075        255 MGRYLAALLGLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF  333 (414)
Q Consensus       255 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  333 (414)
                       +.++.+.....+.++.++.+.+.. +.+......+++|+.....   .+.......+ ..+|.+..+.++.....++|.
T Consensus       274 -~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~---~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgi  348 (394)
T COG2814         274 -GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPA---LQGLQTRLAR-LAPDAADLAGSLNVAAFNLGI  348 (394)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhh---hhHHHHHhcc-cCCCchHHHHHHHHHHHHHHH
Confidence             888888888788877777766654 4444444444555544433   3444444555 334667999999999999999


Q ss_pred             hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        334 AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                      .+|..++|.+.|++|+....++.+...+++.++.+...+.+++
T Consensus       349 a~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~  391 (394)
T COG2814         349 ALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR  391 (394)
T ss_pred             HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999999999999998888877766554443

>PRK03545 putative arabinose transporter; Provisional

Probab=100.00  E-value=4.5e-41  Score=316.41  Aligned_cols=350  Identities=19%  Similarity=0.218  Sum_probs=289.4

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+|+|.|++++|++.+.+.+++.+++++.|++.||+||||++..+.++++++++++++++|++.+++.|+++|++
T Consensus        31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~  110 (390)
T PRK03545         31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA  110 (390)
T ss_pred             chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+...+...+++.|++| +++|++++++...+.++|..++|++++.+.++.|||+.|++.+++.++..+..+...|++++
T Consensus       111 ~~~~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~  189 (390)
T PRK03545        111 HAIFWSITASLAIRVAP-AGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS  189 (390)
T ss_pred             HHHHHHHHHHHHHHhCC-hhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999 49999999999999999999999999999999999999999999888776666665555443


Q ss_pred             CCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh
Q psy14075        177 KQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG  256 (414)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~  256 (414)
                      +++++.++.++.+|+|.++......++..........+.+.++++..|.++.+.+......+++.++++++.+++.||++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~  269 (390)
T PRK03545        190 EHSGSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHP  269 (390)
T ss_pred             CCcchHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            33333345677889998876666555555555556677888888888999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075        257 RYLAALLGLLIIGICLM-MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI  335 (414)
Q Consensus       257 ~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i  335 (414)
                      +|+.. .+..+..++.. .....++.+......++.|++.+...+...   ....+..| +.++++.|+.+...++|..+
T Consensus       270 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~~~-~~~~~~~g~~~~~~~~g~~~  344 (390)
T PRK03545        270 SGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQ---VKVLKLAP-DATDVAMALFSGIFNIGIGA  344 (390)
T ss_pred             hhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHH---HHHHHhCC-CcHHHHHHHHHHHHHHHHHH
Confidence            87654 44444444433 333445555566667777777655433333   23445444 57799999999999999999


Q ss_pred             HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ||.+.|.+.|+.|++..|...+.+.+++.+......+
T Consensus       345 G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  381 (390)
T PRK03545        345 GALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR  381 (390)
T ss_pred             HHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence            9999999999999999999999888888777766654

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=100.00  E-value=8.3e-40  Score=307.53  Aligned_cols=354  Identities=13%  Similarity=0.053  Sum_probs=284.7

Q ss_pred             ccccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075         14 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ   93 (414)
Q Consensus        14 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~   93 (414)
                      ..+..|++++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.+++.|+++
T Consensus        28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~  107 (393)
T PRK09705         28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLG  107 (393)
T ss_pred             cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      |++.+...+...+++.+++|  ++|+++++.+..+..+|..+++.+++.+.++. +||+.+.+.++..++..+..+...+
T Consensus       108 Gig~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~  185 (393)
T PRK09705        108 GVGIGIIQAVMPSVIKRRFQ--QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSA  185 (393)
T ss_pred             HhHHHHHhhhhhHHHHHHcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999985  67999999999999999999999999998875 8999887776665544433333333


Q ss_pred             CCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075        173 PGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG  252 (414)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~  252 (414)
                      ++++++++++.+.++.+++|+.+...+..++....+.....+.|.|+++ +|.+..+++...+..+++.++++++.+++.
T Consensus       186 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~  264 (393)
T PRK09705        186 REVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMA  264 (393)
T ss_pred             CCCccccCCCcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            3222222222334567788888877777777777888888999999987 799999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHH
Q psy14075        253 HRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCL  331 (414)
Q Consensus       253 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~  331 (414)
                      ||++||+....+..+..++.+.+...++.... ....+.|++.+...+...   ....+.. |++++++.+|+.+...++
T Consensus       265 ~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~---~~~~~~~~~~~~~g~~~g~~~~~~~~  340 (393)
T PRK09705        265 RHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGLGGAFPLCL---LLALDHSVQPAIAGKLVAFMQGIGFI  340 (393)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhccchHHHHH---HHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence            99999998888887777776655432221111 223445666665544322   2234444 456789999999999999


Q ss_pred             HHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075        332 GFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       332 g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (414)
                      +..++|.+.|++.|..| +...|.+.++++++..+....+++++
T Consensus       341 ~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (393)
T PRK09705        341 IAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR  384 (393)
T ss_pred             HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence            99999999999999987 78888887777777666655554443

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.9e-41  Score=298.58  Aligned_cols=358  Identities=18%  Similarity=0.159  Sum_probs=306.1

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      +.+.|.+.+|.++|.+|+|++.+++++.|.++..+.|.++||.++|+.+..++++.++.+++++++++.+.+.+..++.|
T Consensus        49 ~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng  128 (448)
T COG2271          49 NLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNG  128 (448)
T ss_pred             hhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            45677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhh--hHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG--GIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~--~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      ..+|..+|++...+++|+| ++|||+..++++++.++|..+.|++.  +.+..+.+||..|++.++++++..+..++..+
T Consensus       129 ~fQg~Gwpp~~~~i~~Wfs-r~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~r  207 (448)
T COG2271         129 WFQGMGWPPCARTITHWFS-RKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLR  207 (448)
T ss_pred             HHhcCCCcHHHHHHHHHcC-ccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999 59999999999999999999999999  89998899999999999999999998888877


Q ss_pred             CCCCCC-----------------C-CCC--ch-----hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        173 PGVVKQ-----------------E-VEP--PT-----LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       173 ~~~~~~-----------------~-~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      ++|++.                 + +++  .+     .+-+++||.+|.+++..++....-+++..|.|.|+.|+.|+|.
T Consensus       208 d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~  287 (448)
T COG2271         208 DRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSL  287 (448)
T ss_pred             CCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCH
Confidence            655321                 0 111  11     2346799999999999999999999999999999999999999


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhhh--hH-HHHHHHHHHHHHHHHHhhhhhhh--HHHHHHHHHHHHHHHhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRMG--RY-LAALLGLLIIGICLMMIPLARNI--NHLIVPNAGLGFAIGMVDSSM  302 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~--~~-~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~  302 (414)
                      .+++...+.+-.+++.|.++.|+++||+-  || ..-++++++..++.+.+...++.  ....+..++.|+.....+  +
T Consensus       288 ~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq--m  365 (448)
T COG2271         288 VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ--M  365 (448)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH--H
Confidence            99999999999999999999999999963  44 44455666667777777776644  444455555555544332  2


Q ss_pred             hhhhhhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        303 MPELGYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       303 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                      . .-....|..|++..|++.|+...+.++ |.+.+....|++.|.+||...|++..+.++++.+++....+.+++
T Consensus       366 L-iGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~~~  439 (448)
T COG2271         366 L-IGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAEER  439 (448)
T ss_pred             H-HHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence            2 222467899999999999999999999 999999999999999999999999988888887777666554443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=100.00  E-value=1e-39  Score=313.86  Aligned_cols=358  Identities=16%  Similarity=0.107  Sum_probs=280.6

Q ss_pred             cccccccCCcccccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh----
Q psy14075          4 GRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF----   79 (414)
Q Consensus         4 ~r~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~----   79 (414)
                      ||.++      .+..|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++.++    
T Consensus        44 ~r~~~------~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~  117 (467)
T PRK09556         44 IRKNF------KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS  117 (467)
T ss_pred             HhcCh------hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc
Confidence            55555      34567888999999999999999999999999999999999999999999888888777766655    


Q ss_pred             -hhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc---CChhHHHH
Q psy14075         80 -GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---GKTAPFLI  155 (414)
Q Consensus        80 -~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~---gw~~~f~~  155 (414)
                       +++++.+++.|+++|++.+...|...++++||+|+ ++|++++|+.+.+.++|.++++++..++.+..   +||..|.+
T Consensus       118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~  196 (467)
T PRK09556        118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPR-RKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIF  196 (467)
T ss_pred             ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCc-cceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHH
Confidence             68999999999999999999999999999999994 99999999999999999999999987777653   69999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCC---------------CC-----CCch----h-hhhccChHHHHHHHHHHHHHHHHHh
Q psy14075        156 LSALALGDGLLQLLLLQPGVVKQ---------------EV-----EPPT----L-KSLVMDPYILIAAGAITFANTGIAM  210 (414)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~-----~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~  210 (414)
                      .+++.++..++.+++.++++++.               ++     ++.+    + ++.+|+|.+|...+..++....+..
T Consensus       197 ~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  276 (467)
T PRK09556        197 PSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIG  276 (467)
T ss_pred             HHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence            88888777666666544332110               00     0111    1 1267899999988888888888888


Q ss_pred             hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH--hhhhhhhHHHHHHH
Q psy14075        211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM--IPLARNINHLIVPN  288 (414)
Q Consensus       211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~  288 (414)
                      ...|+|.|+++.+|++..+++.......++.+++.++.|+++||+++|+.......+..++...  +...++.....+..
T Consensus       277 ~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T PRK09556        277 IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASL  356 (467)
T ss_pred             HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence            8899999999989999999999999999999999999999999999887765544433333222  22223333333444


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHh------------hhchHHHHHH
Q psy14075        289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVN------------TIGFEWMLFI  355 (414)
Q Consensus       289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~------------~~g~~~~~~~  355 (414)
                      ++.|++....   .........|..|++.+|++.|+.+...++ |.+++|.+.|++.|            ..||+..|.+
T Consensus       357 ~~~G~~~~~~---~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~  433 (467)
T PRK09556        357 FALGFLVFGP---QLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAA  433 (467)
T ss_pred             HHHHHHHhhH---HHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHH
Confidence            4444332211   111112355889999999999999999997 77999999999999            6789999999


Q ss_pred             HHHHHHHHHHHHHHhc
Q psy14075        356 IAILDFMYAPLLYLLR  371 (414)
Q Consensus       356 ~~~~~~~~~~~~~~~~  371 (414)
                      ..++.+++.+..+.++
T Consensus       434 ~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        434 LDIAAIGCICLMAIVA  449 (467)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8888888776666553

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=100.00  E-value=1e-37  Score=293.19  Aligned_cols=342  Identities=15%  Similarity=0.163  Sum_probs=274.2

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      .+|++.+++|.+++++|+..+.+.++..+++++.|+++||+||||++..+.++.+++.++++++++++.+++.|+++|++
T Consensus        42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~  121 (394)
T PRK10213         42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLA  121 (394)
T ss_pred             hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHh
Confidence            36889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+...+...+++.|++| +|+|++++++.....++|..++|++++.+.+++|||+.|++.+++.++..+......|++++
T Consensus       122 ~g~~~~~~~~~i~~~~~-~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~  200 (394)
T PRK10213        122 LGGFWAMSASLTMRLVP-PRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG  200 (394)
T ss_pred             hHHHHHHHHHHHHHHcC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc
Confidence            99999999999999999 49999999999999999999999999999999999999999988777665555444555433


Q ss_pred             CCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhch-HHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075        177 KQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSL-PIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM  255 (414)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~  255 (414)
                      +++++.++.++.+|+|.++...+..++..........+. |.|. +++|+++.+.+..+...+++.+++.++.+++.||.
T Consensus       201 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~  279 (394)
T PRK10213        201 EPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS  279 (394)
T ss_pred             ccccchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            333333456678899998877665555555555556666 5554 55799999999999999999999999999999996


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075        256 GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI  335 (414)
Q Consensus       256 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i  335 (414)
                      +++.............+++....++.+......++.|++.+...+.....   ..+..| +++++..+......++|..+
T Consensus       280 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~lg~~~  355 (394)
T PRK10213        280 VKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTW---ITRSLA-DQAEKAGSIQVAVIQLANTC  355 (394)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHH---HHHHCc-ccHHHHHHHHHHHHHHHHHH
Confidence            54433433333333334444455556666667778888887776555544   334444 34567777777888999999


Q ss_pred             HHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075        336 GPAMSGTLVNTIGFEWMLFIIAILDFMYA  364 (414)
Q Consensus       336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~  364 (414)
                      ||.+.|++.|..|++..+...+++.++..
T Consensus       356 G~~l~G~l~~~~g~~~~~~~~~~~~~~~~  384 (394)
T PRK10213        356 GAAIGGYALDNIGLTSPLMLSGTLMLLTA  384 (394)
T ss_pred             HHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence            99999999999998888887766555443

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=100.00  E-value=5.7e-38  Score=290.82  Aligned_cols=341  Identities=13%  Similarity=0.071  Sum_probs=260.4

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      +..|.+++|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.....+|++.+++.|+++|+
T Consensus        12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~   91 (368)
T TIGR00903        12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAAL   91 (368)
T ss_pred             hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999988776665555554433444799999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+.. +...+.++|++|+ |+|++++++.+.+.++|..++++++..+.+++|||+.|++.++++++..++.++..||++
T Consensus        92 g~~~~-~~~~~~~~~~~~~-~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p  169 (368)
T TIGR00903        92 GQPFL-LNAFAPAASQIRE-ERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP  169 (368)
T ss_pred             HhHHH-HHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            99964 5556677999995 999999999999999999999999999999999999999999988887777777777654


Q ss_pred             CCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhh
Q psy14075        176 VKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFG  249 (414)
Q Consensus       176 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g  249 (414)
                      +++++.      .+++++++|||.+|...+..++....++.+.+|+|.|+++ .|++.. .+.......+.+.++.   +
T Consensus       170 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g~---~  244 (368)
T TIGR00903       170 FQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIGV---A  244 (368)
T ss_pred             CCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHHH---H
Confidence            432211      1246788999999999999999999999999999999977 578764 5665555555555554   6


Q ss_pred             hhhhhhhh---HHHHH-HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075        250 PLGHRMGR---YLAAL-LGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG  325 (414)
Q Consensus       250 ~l~d~~~~---~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  325 (414)
                      +++||.+|   |+... ....+.++.+..+....+.........+.+++.....+   ....+..|.+|++.||++.|+.
T Consensus       245 ~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~p~~~rgt~~G~~  321 (368)
T TIGR00903       245 VIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYA---IIMDWIGKFCDKELHGKAAGAI  321 (368)
T ss_pred             HhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHH---HHHHHHHHhcchhhcCcccchh
Confidence            67777643   33322 23444444444444443333333333334443333322   2334577999999999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075        326 DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  368 (414)
                      +...++++.++|.+.+.+..  |.+..|.+.++..+++.+...
T Consensus       322 ~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       322 GFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             hHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998874  777888888877777766654

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK10091 MFS transport protein AraJ; Provisional

Probab=100.00  E-value=7.6e-38  Score=293.49  Aligned_cols=352  Identities=16%  Similarity=0.195  Sum_probs=275.8

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ...|.+.+|+|.|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|+
T Consensus        24 ~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~  103 (382)
T PRK10091         24 GVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGF  103 (382)
T ss_pred             hChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence            35688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+....++.|++| +++|++++++...+..+|..++|++++.+.+..+||+.|++.+++.++..+..++..|+.+
T Consensus       104 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~  182 (382)
T PRK10091        104 PHGAFFGVGAIVLSKIIK-PGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR  182 (382)
T ss_pred             hhHHHHHHHHHHHHHhCC-hHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999988888889999998 4899999999999999999999999999999899999999999988777666555555543


Q ss_pred             CCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075        176 VKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM  255 (414)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~  255 (414)
                      ++++.+.++..+.+|++..+......++..........+++.|+++.+|.++.+.+.+....+++.++++++.+++.||+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~  262 (382)
T PRK10091        183 DEAKGGLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY  262 (382)
T ss_pred             cccccCHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc
Confidence            33222222334567788777665555555445555556777788877899999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075        256 GRYLAALLGLLIIGICLMMIPL-ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA  334 (414)
Q Consensus       256 ~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~  334 (414)
                      ++|+.+..+..+.+++.+.+.. .++.+...+..++.+.+.+...+.....  ...+..+++.++.+  ..+...++|..
T Consensus       263 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~g~~  338 (382)
T PRK10091        263 SPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQIL--LLQNAKGGELLGAA--GGQIAFNLGSA  338 (382)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHH--HHHhCCcchHHHHH--HHHHHHHHHHH
Confidence            9999888888887777655543 3333444444444555444332222211  12233334444443  34677899999


Q ss_pred             HHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        335 IGPAMSGTLVNT-IGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       335 ig~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +||.+.|.+.|. .+|+..+.+.+++.++.........+
T Consensus       339 ~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (382)
T PRK10091        339 IGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR  377 (382)
T ss_pred             HHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999996 57999998887777766655554443

>PRK11663 regulatory protein UhpC; Provisional

Probab=100.00  E-value=8e-38  Score=297.97  Aligned_cols=353  Identities=16%  Similarity=0.138  Sum_probs=273.5

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      ....|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|
T Consensus        43 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g  122 (434)
T PRK11663         43 NAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNA  122 (434)
T ss_pred             HHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            34568888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      ++.|...+...+++.|++| +++|++++++.+.+.++|..++|.+++.+.+++|||+.|++.+++.++..+...+..+|+
T Consensus       123 ~~~g~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~  201 (434)
T PRK11663        123 FFQGWGWPVCAKLLTAWYS-RTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK  201 (434)
T ss_pred             HHHHccchHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999 589999999999999999999999999999999999999999887766555544444333


Q ss_pred             CCCC----------------C---CCCchhhh-----hccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccch
Q psy14075        175 VVKQ----------------E---VEPPTLKS-----LVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQ  230 (414)
Q Consensus       175 ~~~~----------------~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  230 (414)
                      +++.                +   +++.+.++     .+|+|.++...+..++....+..+..|+|.|+++.+|++..++
T Consensus       202 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a  281 (434)
T PRK11663        202 PQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTA  281 (434)
T ss_pred             HhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHH
Confidence            2110                0   00112222     4567888887777777777777888899999988789999999


Q ss_pred             hhHhHHHHHHHHhhhhhhhhhhhhh--hhH-HHHHH---HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075        231 GVSFLPASISYLIGTNLFGPLGHRM--GRY-LAALL---GLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMP  304 (414)
Q Consensus       231 g~~~~~~~~~~~~~~~~~g~l~d~~--~~~-~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  304 (414)
                      +...+...++..+++++.|+++||+  ++| .....   +.....+++..+.. .+......  .+.+++.....+ ...
T Consensus       282 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~-~~~  357 (434)
T PRK11663        282 NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF-ASYVMQAA--CFFTIGFFVFGP-QML  357 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc-ccHHHHHH--HHHHHHHHHhhH-HHH
Confidence            9999999999999999999999998  222 22222   22222222222221 22222222  222333222211 111


Q ss_pred             hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ......|..|++.+|++.|+.+...++|.+++|.+.|++.|+.||+..|...+++.+++.+..+...+
T Consensus       358 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  425 (434)
T PRK11663        358 IGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN  425 (434)
T ss_pred             HHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence            12235677888899999999999999999999999999999999999999998888887766554443

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=100.00  E-value=1.5e-37  Score=300.48  Aligned_cols=328  Identities=19%  Similarity=0.179  Sum_probs=276.7

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      ++++|.+.+|+|.+.++.+|+.+.+.+++.++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++|
T Consensus        26 ~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G  105 (495)
T PRK14995         26 HVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLA  105 (495)
T ss_pred             HHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      +|.+...+.....+.++++++++|+++++++....++|..+||.+++.+.++++||+.|++...+.++..++..+..|++
T Consensus       106 ~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~  185 (495)
T PRK14995        106 IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ  185 (495)
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99999999888888787633589999999999999999999999999999999999999999888887777766666654


Q ss_pred             CCCCCCCCc---------------------------h-----------------------------hhhhccChHHHHHH
Q psy14075        175 VVKQEVEPP---------------------------T-----------------------------LKSLVMDPYILIAA  198 (414)
Q Consensus       175 ~~~~~~~~~---------------------------~-----------------------------~~~~~~~~~~~~~~  198 (414)
                      +++++++.+                           .                             ..+++|+|.+....
T Consensus       186 ~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~  265 (495)
T PRK14995        186 AGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGV  265 (495)
T ss_pred             CCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHH
Confidence            332111100                           0                             02456777777777


Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA  278 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~  278 (414)
                      +..++..........++|.|+++.+|+++.++|.......++..++.++.|++.||+++|+.+..+..+..++...+...
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~  345 (495)
T PRK14995        266 VMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT  345 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh
Confidence            77777777777788899999999999999999999999999999999999999999999998888888877776655432


Q ss_pred             ---hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075        279 ---RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN  345 (414)
Q Consensus       279 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~  345 (414)
                         ++.+......++.|++.+...+...   ....+..|+++++.+.++.++.+++|+.+|+.+.|.+.+
T Consensus       346 ~~~~~~~~~~~~~~l~G~g~g~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~  412 (495)
T PRK14995        346 DFSTQQWQAWGLMALLGFSAASALLAST---SAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS  412 (495)
T ss_pred             cCCCchHHHHHHHHHHHHhHHHHHHHHH---HHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               2344455667788888887754333   335567788889999999999999999999999999875

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=100.00  E-value=1.1e-37  Score=292.08  Aligned_cols=344  Identities=17%  Similarity=0.197  Sum_probs=281.9

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      .+..|.+.+++|.|++++|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|
T Consensus        23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  102 (377)
T TIGR00890        23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS  102 (377)
T ss_pred             hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      ++.+..++.....+.+++|  |+|+++.++...+.++|..+++++.+.+.+..+||+.|++.+++.++..+..+++.+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  180 (377)
T TIGR00890       103 AGVGIAYGIALNTAVKWFP--DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYP  180 (377)
T ss_pred             HHHHHHHHhHHHHHHHHcC--cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecC
Confidence            9999988888888999986  57999999999999999988887877788888999999999998888777766655433


Q ss_pred             CCCC--CC-----CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhh
Q psy14075        175 VVKQ--EV-----EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNL  247 (414)
Q Consensus       175 ~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~  247 (414)
                      ++++  ++     ++.+.++.+|+|.++......++..........+.+.|.++ +|.+..+.+.......++.++++++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  259 (377)
T TIGR00890       181 PGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPF  259 (377)
T ss_pred             chhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            2211  11     11245677888888877766666655555566667777655 7888888899999999999999999


Q ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhH--HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075        248 FGPLGHRMGRYLAALLGLLIIGICLMMIPLARNIN--HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG  325 (414)
Q Consensus       248 ~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  325 (414)
                      .+++.||++||+.+..+..+..++.+.+...++..  ......++.+++.+...+...   ....|..|+++|+++.|+.
T Consensus       260 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~~~~~~~~~~~~~~~~g~~  336 (377)
T TIGR00890       260 LGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFP---SLVSDIFGPANSAANYGFL  336 (377)
T ss_pred             HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccH---HHHHHHhhhhhhhhHhHHH
Confidence            99999999999999888888888877666654322  222334555666555443333   2356778889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075        326 DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYA  364 (414)
Q Consensus       326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~  364 (414)
                      +....+|..++|.+.|.+.|..||+..|.+.+++.+++.
T Consensus       337 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       337 YTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL  375 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence            999999999999999999999999999988877766643

>TIGR00893 2A0114 d-galactonate transporter

Probab=100.00  E-value=3.2e-37  Score=290.75  Aligned_cols=349  Identities=20%  Similarity=0.194  Sum_probs=280.6

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      ....|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus        14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g   93 (399)
T TIGR00893        14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG   93 (399)
T ss_pred             hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            34567788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      ++.+...+...+++.|++| +++|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++..+..++..+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
T TIGR00893        94 AAEAPFFPGIILIVASWFP-ASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP  172 (399)
T ss_pred             HHHHhhhhHHHHHHHHhCC-HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence            9999999999999999999 499999999999999999999999999999999999999999988887777666555443


Q ss_pred             CCCCC-------------------------CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc
Q psy14075        175 VVKQE-------------------------VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ  229 (414)
Q Consensus       175 ~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  229 (414)
                      +++++                         +++.+.++.+|+|+++...+..++..........+.|.|+++.+|.++.+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (399)
T TIGR00893       173 PQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE  252 (399)
T ss_pred             CCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH
Confidence            32110                         01112456788999998888888888888889999999999989999999


Q ss_pred             hhhHhHHHHHHHHhhhhhhhhhhhhhhhHH--HHHH------HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhh
Q psy14075        230 QGVSFLPASISYLIGTNLFGPLGHRMGRYL--AALL------GLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSS  301 (414)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  301 (414)
                      .+.......++.+++.++.+++.||++||+  ....      +.....+........++.+.......+.+.+.+ .   
T Consensus       253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---  328 (399)
T TIGR00893       253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-A---  328 (399)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-h---
Confidence            999999999999999999999999999885  1111      111111111111111222222222222222222 2   


Q ss_pred             hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHH
Q psy14075        302 MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       302 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~  368 (414)
                      .........|..|++.|+++.|+.+...++|..++|.+.|.+.|..| ++..|.+.+++.+++.+..+
T Consensus       329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  396 (399)
T TIGR00893       329 GAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL  396 (399)
T ss_pred             hhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence            23334456788899999999999999999999999999999999999 99999888887777666554

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=100.00  E-value=8.2e-38  Score=295.57  Aligned_cols=339  Identities=15%  Similarity=0.097  Sum_probs=264.2

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+|+|+|.+++|++.+.+.+++.+++++.|++.||+|||+++..+.++++++++++++++|++.+++.|+++|++
T Consensus        30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~  109 (412)
T TIGR02332        30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIA  109 (412)
T ss_pred             HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            45677899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh------hcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ------FVGKTAPFLILSALALGDGLLQLLL  170 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~------~~gw~~~f~~~~~~~~~~~~~~~~~  170 (414)
                      .+...|...+++.|++| +++|++++++++.+.++|..+++.+++.+.+      ..|||+.|++.++..++..++.+++
T Consensus       110 ~~~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~  188 (412)
T TIGR02332       110 EAGFLPGILLYLTFWFP-AYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW  188 (412)
T ss_pred             HhhHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence            99999999899999999 4899999999999999999999999998874      3699999999998888776666666


Q ss_pred             ccCCCCCCC-----------------------CC----C------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHH
Q psy14075        171 LQPGVVKQE-----------------------VE----P------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPI  217 (414)
Q Consensus       171 ~~~~~~~~~-----------------------~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (414)
                      .||++++++                       ++    +      ..++++ ++|.+|...+..++....+..+.+|+|.
T Consensus       189 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~  267 (412)
T TIGR02332       189 LDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIWTPQ  267 (412)
T ss_pred             cCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            655442210                       00    0      011222 3567777777777777888889999999


Q ss_pred             HHHHH-hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHH-HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q psy14075        218 WMMDT-MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLA-ALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAI  295 (414)
Q Consensus       218 ~~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~  295 (414)
                      |+++. .|.+..+++.......++.+++.++.|+++||+++|+. .........+++++....++.........+.+++.
T Consensus       268 ~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  347 (412)
T TIGR02332       268 ILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGS  347 (412)
T ss_pred             HHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence            99873 46778888999999999999999999999999987664 33344444444332222222221122222222222


Q ss_pred             HhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHH
Q psy14075        296 GMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILD  360 (414)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~  360 (414)
                      ...   .........+..|+++|++++|+.+...++|++++|.+.|.+.|..| |+..+.+.+++.
T Consensus       348 ~~~---~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~  410 (412)
T TIGR02332       348 FSA---MAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL  410 (412)
T ss_pred             hhh---hhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence            111   11111223456788899999999999999999999999999999886 998888766543

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK03699 putative transporter; Provisional

Probab=100.00  E-value=6e-37  Score=288.60  Aligned_cols=353  Identities=13%  Similarity=0.097  Sum_probs=281.5

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ...|++.+++|.|+++.+++.+.+.+++.+++++.|++.||+||||++..+.++.+++.++++++++++.+++.|+++|+
T Consensus        28 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~  107 (394)
T PRK03699         28 MVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGV  107 (394)
T ss_pred             hhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-hcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-FVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      +.+...+...+++.|++| +++|+++++..+...++|..++|.+.+.+.+ ..+||+.|.+.+++.++..++.++...|+
T Consensus       108 ~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~  186 (394)
T PRK03699        108 VSGITMSIGTFLITHVYE-GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA  186 (394)
T ss_pred             hhHhhccchhHHhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            999999888999999998 4899999999999999999999999888764 57999999998888777655544332222


Q ss_pred             CCCCCC-CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh
Q psy14075        175 VVKQEV-EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH  253 (414)
Q Consensus       175 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d  253 (414)
                      ++++++ +..+..+...++.++...+..++....+..+..|+|.|+++.+|+++.+.+...+...++..+++++.++++|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d  266 (394)
T PRK03699        187 LGKHAPKADKPVAKEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVR  266 (394)
T ss_pred             ccccCccccCccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111 1111111223566676666667766777788899999999889999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH
Q psy14075        254 RMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF  333 (414)
Q Consensus       254 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  333 (414)
                      |+++|+.+.....+..+.+.++...++.+......++.|++.+...+....   ...+..| +.+++..+......++|.
T Consensus       267 r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~---~~~~~~~-~~~~~~~g~~~~~~~~g~  342 (394)
T PRK03699        267 FFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIIT---LGSQQTK-VASPKLVNFILTCGTIGT  342 (394)
T ss_pred             HhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHcc-CCCHHHHHHHHHhhhHHH
Confidence            999999888777766666555555555555555566677766655443332   2334333 334677888888899999


Q ss_pred             hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        334 AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      .++|.+.|++.|..|++..++..+++.+++.+.+....+.
T Consensus       343 ~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  382 (394)
T PRK03699        343 MLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGFV  382 (394)
T ss_pred             HHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988888877776666555543

>KOG3764|consensus

Probab=100.00  E-value=4.4e-38  Score=275.67  Aligned_cols=351  Identities=55%  Similarity=1.003  Sum_probs=318.3

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS  101 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~  101 (414)
                      .++.+.+++++|++++.+.+.+.+.+|+.|.+.||+|+|-.+++|..+...+++++++.++++.++++|.+||+|.++..
T Consensus        98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~  177 (464)
T KOG3764|consen   98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD  177 (464)
T ss_pred             ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence            35667789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCC--C
Q psy14075        102 VSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQ--E  179 (414)
Q Consensus       102 ~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~  179 (414)
                      ++..++++|.+|++++|++++|+...+.++|.++||++||.+++..|.+.+|++.+++.++...+.++..++.+.++  .
T Consensus       178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~  257 (464)
T KOG3764|consen  178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST  257 (464)
T ss_pred             hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc
Confidence            99999999999976778999999999999999999999999999999999999999999999999999988866554  4


Q ss_pred             CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh--h
Q psy14075        180 VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG--R  257 (414)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~--~  257 (414)
                      ++..++++++++|..+.........+.........++.+..+.+..+..+.|+.+....+...++..+.|.+.||++  |
T Consensus       258 ~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~  337 (464)
T KOG3764|consen  258 EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR  337 (464)
T ss_pred             ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh
Confidence            55667999999999999888888888888889999999999988877779999999999999999999999999999  5


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc---chhhHHhHHHHHHHHHHh
Q psy14075        258 YLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA---VYGSVYAIGDVAFCLGFA  334 (414)
Q Consensus       258 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~  334 (414)
                      ......+++..++++...++.+++..+++..+..+++.+.....+.+...+..|..+.+   ..|..+++......+|.+
T Consensus       338 wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a  417 (464)
T KOG3764|consen  338 WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYA  417 (464)
T ss_pred             HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhh
Confidence            44445566666777777888888888888888899999999999999999999887777   889999999999999999


Q ss_pred             HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        335 IGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       335 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +||.++|.+.+..|++|...+.++..++...++..++.
T Consensus       418 ~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~~  455 (464)
T KOG3764|consen  418 IGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLRI  455 (464)
T ss_pred             ccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999888888887777666654

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=100.00  E-value=1.3e-36  Score=287.92  Aligned_cols=350  Identities=19%  Similarity=0.148  Sum_probs=279.5

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ...|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|+
T Consensus        36 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~  115 (406)
T PRK11551         36 VAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV  115 (406)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence            35688899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++| +++|++++++.+.+..+|..+++.+++.+.+..+||+.|++.+++.++..+......||++
T Consensus       116 ~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  194 (406)
T PRK11551        116 GLGGALPNLIALTSEAVG-PRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR  194 (406)
T ss_pred             hHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence            999999999999999999 4999999999999999999999999988888899999999988877666665555555543


Q ss_pred             CCCCC-----CCc-hhhhhccC---hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075        176 VKQEV-----EPP-TLKSLVMD---PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN  246 (414)
Q Consensus       176 ~~~~~-----~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~  246 (414)
                      +++++     +++ ..++.+++   +..+......++..........+.|.|+++ .|.++.+.+.......++.+++++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~  273 (406)
T PRK11551        195 AFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSL  273 (406)
T ss_pred             hHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHH
Confidence            22111     111 12223332   233334444444455566677789999887 699999999999999999999999


Q ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHH
Q psy14075        247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGD  326 (414)
Q Consensus       247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  326 (414)
                      +.|++.||+++|+.+..+.....++++.+...++.+...+..++.|++.+...+...   ....+..|++.|+++.|+.+
T Consensus       274 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~~  350 (406)
T PRK11551        274 LIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLY---ALAPLFYPTQVRGTGVGAAV  350 (406)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHcchhhhhhhhhHHH
Confidence            999999999999988887777777766666666655555556666666555444333   34667888999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHh
Q psy14075        327 VAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       327 ~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      ....+|..++|.+.|.+.++.+ +...+.....+.+++.+..+..
T Consensus       351 ~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        351 AVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL  395 (406)
T ss_pred             HhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998755 5566666666665555555444

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=100.00  E-value=2.9e-36  Score=284.85  Aligned_cols=345  Identities=19%  Similarity=0.226  Sum_probs=270.3

Q ss_pred             chh-hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh--------hhHHHHHH
Q psy14075         18 REN-RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--------RTYGVLFL   88 (414)
Q Consensus        18 ~~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~l~~   88 (414)
                      +|. +.+++|.|+.++|++.+++.+++.+++++.|+++||+||||++..+.++++++.+.+.++        .+++.+++
T Consensus        38 l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  117 (399)
T PRK05122         38 LPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLL  117 (399)
T ss_pred             HHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHH
Confidence            454 578899999999999999999999999999999999999999999999988877766543        25778999


Q ss_pred             HHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHH
Q psy14075         89 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQL  168 (414)
Q Consensus        89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~  168 (414)
                      .|+++|++.+...+...+++.|++| +|+|++++++.+....+|..+++.+++.+.++.|||+.+++.++..++..+...
T Consensus       118 ~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  196 (399)
T PRK05122        118 GRLLLGIGESLAGTGSILWGIGRVG-ALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLAR  196 (399)
T ss_pred             HHHHHHhhHHhhcchHHHHHHhhcC-hhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999 499999999999999999999999999999999999998887776554333322


Q ss_pred             HhccCCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075        169 LLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF  248 (414)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~  248 (414)
                       ..|++++ +++++.++++.+|+  .+.......+....+.....+.|.|+.+ .|.+  +.+.......++.++++++.
T Consensus       197 -~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~  269 (399)
T PRK05122        197 -PRPAVPP-VKGERLPFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLF  269 (399)
T ss_pred             -cCCCCCC-CCccchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHH
Confidence             1222211 12222234444432  2222223333445555666778888776 4553  45666777888899999999


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHH
Q psy14075        249 GPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVA  328 (414)
Q Consensus       249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  328 (414)
                      +++.||+++|+.+..+..+..++.+.+...++.+...+..++.|++.+...+...   ....+..|+++||++.|+.+..
T Consensus       270 g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~  346 (399)
T PRK05122        270 GNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALG---VEAVKRVPPQNRGAALGAYSVF  346 (399)
T ss_pred             HHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHH---HHHHHhCCHHHHHHHHHHHHHH
Confidence            9999999999988888888888877777766666666667778888776654333   3355777889999999999999


Q ss_pred             HHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        329 FCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       329 ~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      .++|..++|.+.|.+.|..||+..|.+.+++.+++.+.....+++
T Consensus       347 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  391 (399)
T PRK05122        347 LDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR  391 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            999999999999999999999999999888888877766665553

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=100.00  E-value=1.1e-36  Score=292.62  Aligned_cols=352  Identities=12%  Similarity=0.037  Sum_probs=261.6

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.+++.|++.|++
T Consensus        58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~  137 (476)
T PLN00028         58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS  137 (476)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh---------hcCChhHHHHHHHHHHHHHHHH
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ---------FVGKTAPFLILSALALGDGLLQ  167 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~---------~~gw~~~f~~~~~~~~~~~~~~  167 (414)
                      .+...+ ...+++|++| +++|++++++.+...++|..+++.+...+..         ..|||+.|++.+++.++..++.
T Consensus       138 ~~~~~~-~~~~i~~~~~-~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~  215 (476)
T PLN00028        138 LATFVS-CQYWMSTMFN-GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILV  215 (476)
T ss_pred             HHhhHH-HHHHHHHhcC-hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence            886544 5678999999 4999999999988877787777666544432         2489999999999988877776


Q ss_pred             HHhccCCCCCC------C--CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH
Q psy14075        168 LLLLQPGVVKQ------E--VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL  235 (414)
Q Consensus       168 ~~~~~~~~~~~------~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~  235 (414)
                      +++.+++++.+      +  .++    ..+++.++++++|...+..++.......+..++|.|+.+.+|++..+++.+..
T Consensus       216 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~  295 (476)
T PLN00028        216 LTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAA  295 (476)
T ss_pred             HHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHH
Confidence            66654433211      0  011    12345677888887777666666666667788999998888999999999999


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhH-------HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075        236 PASISYLIGTNLFGPLGHRMGRY-------LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGY  308 (414)
Q Consensus       236 ~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  308 (414)
                      ...++.++++++.|+++||++||       ........+.++..+.+...++.+......++.+++.+...+...+.   
T Consensus       296 ~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---  372 (476)
T PLN00028        296 SFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGI---  372 (476)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhccc---
Confidence            99999999999999999999865       22333333333434444444444444444555566555444333332   


Q ss_pred             hhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q psy14075        309 LVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPT  375 (414)
Q Consensus       309 ~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (414)
                      ..+ ..++.+|.+.|+.+...++|+.++|.+.+ ..+..+|+..|.+.+++.+++.++.++.+.+..
T Consensus       373 ~~~-~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~~~~  437 (476)
T PLN00028        373 VPF-VSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIHFPQW  437 (476)
T ss_pred             Ccc-cChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHheeccch
Confidence            223 23467799999987766666666665543 112345899999998888888777777764443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=100.00  E-value=6.1e-36  Score=283.16  Aligned_cols=345  Identities=16%  Similarity=0.151  Sum_probs=277.9

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      +..|.+.+++|.|+.+.++..+.+.+++.+++++.|+++||+||||++..+..+.+++.+++.++++++.+++.|+++|+
T Consensus        34 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~  113 (406)
T PRK15402         34 PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGI  113 (406)
T ss_pred             cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence            34678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+.+.|++| +++|.+.+++......+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||++
T Consensus       114 ~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (406)
T PRK15402        114 GLCFIGAVGYAAIQESFE-EADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA  192 (406)
T ss_pred             HhhhHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999988888999999999 4899999999999999999999999999999899999999999888877766655555543


Q ss_pred             CCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhh
Q psy14075        176 VKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFG  249 (414)
Q Consensus       176 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g  249 (414)
                      ++++++      .+++++++++|+++...+...+..........+.|.++++.+|.++.+.+.......++.+++.++.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g  272 (406)
T PRK15402        193 GRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLA  272 (406)
T ss_pred             ccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322211      12346678899988877776666666666667789888888899998999888878888999999999


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhH
Q psy14075        250 PLGHRMGRYLAALLGLLIIGICLMMIPLAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAI  324 (414)
Q Consensus       250 ~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  324 (414)
                      ++.||+++|+.+..+..+..++.+.+...+     +.+......++.|++.+...+......    ...+++++|++.+.
T Consensus       273 ~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~----~~~~~~~~g~~~~~  348 (406)
T PRK15402        273 RLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLT----LFSSDVSKGTVSAA  348 (406)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHH----hhhccccccHHHHH
Confidence            999999999998888887777766655432     334445566777777776654433322    22234678999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075        325 GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP  365 (414)
Q Consensus       325 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~  365 (414)
                      .+....++..+|+.+.+.+.+..+.........+..++...
T Consensus       349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  389 (406)
T PRK15402        349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLL  389 (406)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999887754444344434444333

>TIGR00900 2A0121 H+ Antiporter protein

Probab=100.00  E-value=1.7e-36  Score=282.82  Aligned_cols=329  Identities=16%  Similarity=0.206  Sum_probs=276.7

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh-----hHHHHHHHH
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-----TYGVLFLAR   90 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~r   90 (414)
                      +..|.+.++++.++.++|++.+.+.++..+++++.|+++||+||||++..+.++..++.++..+.+     +++.+++.|
T Consensus        20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (365)
T TIGR00900        20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLA   99 (365)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence            346778899999999999999999999999999999999999999999999999999998888887     999999999


Q ss_pred             HHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075         91 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLL  170 (414)
Q Consensus        91 ~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~  170 (414)
                      ++.|++.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.++.+||+.|++.++..++..+..+..
T Consensus       100 ~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  178 (365)
T TIGR00900       100 GILAIAQAFFTPAYQAMLPDLVP-EEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV  178 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999 59999999999999999999999999999999999999999888776665555544


Q ss_pred             ccCCCCC-CCCC-C--------chhhhhccChHHHHHHHHHHHHHHHHHhhh-hchHHHHHHHhCCCccchhhHhHHHHH
Q psy14075        171 LQPGVVK-QEVE-P--------PTLKSLVMDPYILIAAGAITFANTGIAMLE-PSLPIWMMDTMGADKWQQGVSFLPASI  239 (414)
Q Consensus       171 ~~~~~~~-~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~  239 (414)
                      .+|++++ ++++ +        +.+++.+|+|.++...+..++......... .+.|.|.++.+|.++.+.+.......+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (365)
T TIGR00900       179 RIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGL  258 (365)
T ss_pred             ccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHH
Confidence            3333222 1111 1        123456788888877777776666666555 788999888789999999999999999


Q ss_pred             HHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075        240 SYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN-INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY  318 (414)
Q Consensus       240 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (414)
                      +.+++.++.+++.||.+|++.+..+..+.+++...+.+.++ .+...+..++.|++.+...+...   +...+..|++.|
T Consensus       259 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~  335 (365)
T TIGR00900       259 GALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQG---TLLQRRVPAELL  335 (365)
T ss_pred             HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCHHHH
Confidence            99999999999999999999888887777777777666653 55566677777888777654433   346678889999


Q ss_pred             hhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075        319 GSVYAIGDVAFCLGFAIGPAMSGTLVNTIG  348 (414)
Q Consensus       319 g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g  348 (414)
                      +++.|+.+...+++..++|.+.|.+.|..|
T Consensus       336 g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g  365 (365)
T TIGR00900       336 GRVFGAQFSLSHAAWPLGLILAGPLADHLG  365 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999999999999998764

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=100.00  E-value=4.3e-36  Score=290.21  Aligned_cols=354  Identities=18%  Similarity=0.173  Sum_probs=254.6

Q ss_pred             cchhhhhhhcCCcch-HHH-----HHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHH-----
Q psy14075         17 ARENRHKYLMGETKA-VGV-----MFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGV-----   85 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~-~g~-----~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-----   85 (414)
                      ..|.+.++++.+.++ .++     +.++..+++.+++++.|+++||+|||+++.++.++++++++++++++|+++     
T Consensus        38 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a  117 (490)
T PRK10642         38 VAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWA  117 (490)
T ss_pred             HHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            457777888654322 222     257788999999999999999999999999999999999999999999875     


Q ss_pred             ---HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHH
Q psy14075         86 ---LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFL  154 (414)
Q Consensus        86 ---l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~  154 (414)
                         +++.|+++|++.|..++...+++.|++|+ ++|+++.++.+.+..+|..+++.+...+.        ..+|||+.|+
T Consensus       118 ~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~  196 (490)
T PRK10642        118 PILLLLCKMAQGFSVGGEYTGASIFVAEYSPD-RKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFF  196 (490)
T ss_pred             HHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHH
Confidence               89999999999999999999999999995 99999999999988888888886665443        2579999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCC--------C--C-----CCCchhhhhccC-hHHHH-HHHHHHHHHHHHHhhhhchHH
Q psy14075        155 ILSALALGDGLLQLLLLQPGVVK--------Q--E-----VEPPTLKSLVMD-PYILI-AAGAITFANTGIAMLEPSLPI  217 (414)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~--------~--~-----~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  217 (414)
                      +.+++.++..++ ....||+++.        +  +     +++.++++++++ ++.+. .....++....++....++|.
T Consensus       197 i~~~~~l~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  275 (490)
T PRK10642        197 IALPLGIIGLYL-RHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPS  275 (490)
T ss_pred             HHHHHHHHHHHH-HHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            987666554333 3344443220        0  0     112234555543 23222 223334455667778889999


Q ss_pred             HHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH-HHhhh--hhhhHHHHHHHHHHHHH
Q psy14075        218 WMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL-MMIPL--ARNINHLIVPNAGLGFA  294 (414)
Q Consensus       218 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~-~~~~~--~~~~~~~~~~~~~~g~~  294 (414)
                      |+++.+|++..+.+.......++.+++.++.|+++||+|||+.+..+.++..++. ..+..  .++........++.+++
T Consensus       276 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  355 (490)
T PRK10642        276 YLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI  355 (490)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            9988889988888877778888899999999999999999998877765443322 21222  22333444445555655


Q ss_pred             HHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        295 IGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      .+...+...   ....+.+|++.|+++.|+.+....+++.++|.+.+++.+..+ +...+++..+.++++.+..++.++.
T Consensus       356 ~~~~~g~~~---~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes  432 (490)
T PRK10642        356 LNCFTGVMA---STLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKET  432 (490)
T ss_pred             HHHHHHHHH---HHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence            554433323   235578999999999998666677778899999999988765 5555555555666666655665554


Q ss_pred             Cc
Q psy14075        374 PT  375 (414)
Q Consensus       374 ~~  375 (414)
                      ++
T Consensus       433 ~~  434 (490)
T PRK10642        433 AN  434 (490)
T ss_pred             cC
Confidence            33

>PRK10489 enterobactin exporter EntS; Provisional

Probab=100.00  E-value=2.9e-36  Score=286.30  Aligned_cols=350  Identities=16%  Similarity=0.081  Sum_probs=278.7

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-----GRTYGVLFLARS   91 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~   91 (414)
                      ..|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+..+.     .++++.+++.|+
T Consensus        39 ~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  118 (417)
T PRK10489         39 AVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGL  118 (417)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence            457788899999999999999999999999999999999999999999988888877665542     567899999999


Q ss_pred             HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075         92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus        92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      ++|++.+...++..+++.|++| +++|+++.++.+...++|..+||.+++.+.+..+|++.|++.++..++..++.+..+
T Consensus       119 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  197 (417)
T PRK10489        119 WDGFFGSLGVTALLAATPALVG-RENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLP  197 (417)
T ss_pred             HHHHHHHHHHHHHhhhhhhccC-HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999888988999999999 499999999999999999999999999999989999999998887776665555443


Q ss_pred             cCCCCCCCCCC------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhh
Q psy14075        172 QPGVVKQEVEP------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT  245 (414)
Q Consensus       172 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~  245 (414)
                      +++++++++++      +.++..+++|.++...+..++... ......++|.|.++.+|.++.+.+++.+...++.+++.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~  276 (417)
T PRK10489        198 ALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA  276 (417)
T ss_pred             CCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH
Confidence            32222111111      123456678876655544443332 34567789999998889999999999999999999999


Q ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075        246 NLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG  325 (414)
Q Consensus       246 ~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  325 (414)
                      ++.+++.||.++++.+..+..+..++.+.+.+.++.+...+..++.|++.+...+...   +...+..|++.||+++|+.
T Consensus       277 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~  353 (417)
T PRK10489        277 LTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQY---TLLQTQTPDEMLGRINGLW  353 (417)
T ss_pred             HHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhCCHHHHHHHHHHH
Confidence            9999999998777777788877777777776666665556666677776665533322   3456778888999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        326 DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      +...++|..+||.+.|.+.|..|+...+...+++..+..++.....
T Consensus       354 ~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  399 (417)
T PRK10489        354 TAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL  399 (417)
T ss_pred             HHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999988888777766666555444433

>TIGR00899 2A0120 sugar efflux transporter

Probab=100.00  E-value=1.3e-35  Score=278.19  Aligned_cols=345  Identities=17%  Similarity=0.165  Sum_probs=274.0

Q ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhh
Q psy14075         21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT-GFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSC   99 (414)
Q Consensus        21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~   99 (414)
                      +++++|.|+.++|++.+.+.+...+.+++.|+++||+||||.++. +.+...++.++++++++++.+++.|++.|.+.+.
T Consensus        24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~  103 (375)
T TIGR00899        24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAST  103 (375)
T ss_pred             HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhh
Confidence            568899999999999999999999999999999999999987654 5666677788889999999999999999988888


Q ss_pred             hhhhHHHHHhhcCCCcchhhHH--HHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy14075        100 SSVSGMGMLAERYPDDRERGNA--MGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK  177 (414)
Q Consensus       100 ~~~~~~~~i~~~~~~~~~r~~~--~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~  177 (414)
                      ..|...++..|+.| +++|++.  .+......++|..++|++++.+.+.++||+.|++.++..++..+..+++.||++++
T Consensus       104 ~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  182 (375)
T TIGR00899       104 ANPQLFALAREHAD-RTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRG  182 (375)
T ss_pred             hHHHHHHHHHHHhh-hcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence            88888888999887 4666654  68888889999999999999999999999999999998877777766655554332


Q ss_pred             CC--CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075        178 QE--VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM  255 (414)
Q Consensus       178 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~  255 (414)
                      ++  +++.+.++.+++|+++......++..........++|.|+++++|.++.+.+..........+++.++.+++.||+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~  262 (375)
T TIGR00899       183 APGALTRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF  262 (375)
T ss_pred             cccccCcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            22  1223445567788777665555555555555667789999888899999999888877777888899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075        256 GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI  335 (414)
Q Consensus       256 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i  335 (414)
                      ++|+.+..+.....+.+..+...++.+......++.|++.+...+....   ...|..|+ +++++.++.+...++|..+
T Consensus       263 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~g~~~  338 (375)
T TIGR00899       263 GKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGML---YFQDLMPG-RAGAATTLYTNTGRVGWII  338 (375)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCcc-hhhHHHHHHHHHHHHHHHH
Confidence            9999888777766666555555556665556666677777766443332   34455554 4579999999999999999


Q ss_pred             HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075        336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      +|.+.|.+.|..|++..|.+.+++.+++.+...+.
T Consensus       339 g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  373 (375)
T TIGR00899       339 AGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI  373 (375)
T ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence            99999999999999999999888887777665544

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=100.00  E-value=5.6e-36  Score=286.79  Aligned_cols=357  Identities=13%  Similarity=0.075  Sum_probs=267.6

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVLFLARSL   92 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l   92 (414)
                      ..|.+.++ |.|+++.|++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.+++++.+    +++.+++.|++
T Consensus        51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l  129 (452)
T PRK11273         51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFL  129 (452)
T ss_pred             hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHH
Confidence            45677777 99999999999999999999999999999999999999999999999999888753    78889999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhh-hchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVL-IGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~-ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      .|++.+...+...+.+.|++|+ ++|++++++++.+.++|.. .+|+++..+....+||+.|++.+++.++..++.+++.
T Consensus       130 ~gi~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~  208 (452)
T PRK11273        130 CGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMM  208 (452)
T ss_pred             HHHHHhccchHHHHHHHHhCCh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999888888889999994 9999999999999999874 4555444444445999999999888777666666555


Q ss_pred             cCCCCCC-------------------CCCCchh-----hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        172 QPGVVKQ-------------------EVEPPTL-----KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       172 ~~~~~~~-------------------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      +|++++.                   ++++.+.     +.++|+|.+|...+..++..........++|.|++++.|++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~  288 (452)
T PRK11273        209 RDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL  288 (452)
T ss_pred             cCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            4432210                   0000111     235688999888888877777777888899999999889998


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhh--hhHHHH-HHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRM--GRYLAA-LLGLLIIGICLMMIPLA--RNINHLIVPNAGLGFAIGMVDSSM  302 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~-~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~  302 (414)
                      .+.+.......++.+++.++.|+++||+  +||+.. .....+..++.+.+...  .+.+......+..|.+...  + .
T Consensus       289 ~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~-~  365 (452)
T PRK11273        289 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYG--P-V  365 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHh--H-H
Confidence            8999888888999999999999999998  444322 22223333333332222  1222222333333332211  1 1


Q ss_pred             hhhhhhhhhcccccchhhHHhHHHHHHHHHHhH-HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchhh
Q psy14075        303 MPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI-GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEE  378 (414)
Q Consensus       303 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (414)
                      ........|..|++.+|++.|+.+...++|+.+ +|.+.|.+.|+.||+..|.+++++++++++....+.+.++|++
T Consensus       366 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  442 (452)
T PRK11273        366 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRHH  442 (452)
T ss_pred             HHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence            112223568889999999999999988898765 7999999999999999999888888887777666655544443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=100.00  E-value=7.9e-37  Score=292.27  Aligned_cols=347  Identities=18%  Similarity=0.263  Sum_probs=277.1

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHH
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFL-ARSLQ   93 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~   93 (414)
                      ....|++.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|+++
T Consensus        39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~  118 (455)
T TIGR00892        39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFIT  118 (455)
T ss_pred             hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999999999999999999999999999999998875 56999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      |++.+...+...+++.++++  ++|++++++.+.+..+|..++|++++.+.+.+|||++|++.+++.++..+..++..++
T Consensus       119 G~~~~~~~~~~~~~~~~~~~--~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~  196 (455)
T TIGR00892       119 GLGLAFNFQPSLTMLGKYFY--RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV  196 (455)
T ss_pred             HhcchhhhhHHHHHHHHHHH--hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999877777888899985  6899999999999999999999999999999999999999999887665555444432


Q ss_pred             CCC-----C---C----C-C-CC-------chh-----hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        174 GVV-----K---Q----E-V-EP-------PTL-----KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       174 ~~~-----~---~----~-~-~~-------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      ++.     +   +    + . ++       .+.     .+++++|.++......++....+.....++|.|.++ .|++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~  275 (455)
T TIGR00892       197 GPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDE  275 (455)
T ss_pred             CcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCH
Confidence            110     0   0    0 0 00       000     146788888887777777777777778889999877 69999


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhh--hhHHHHH--HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRM--GRYLAAL--LGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      .+++...++.+++.++++++.+++.||.  ++++...  .+..+.++++++....++.+.+.+..++.|++.+...+...
T Consensus       276 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~  355 (455)
T TIGR00892       276 YEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLF  355 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHH
Confidence            9999999999999999999999999973  3333232  23344444444555566666667777888888776655444


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHH
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLL  367 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~  367 (414)
                      +   ...+..|+++++++.|+.+...++|..+||.+.|.+.|..| |+..|++.+++.+++.+..
T Consensus       356 ~---~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~  417 (455)
T TIGR00892       356 E---VLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL  417 (455)
T ss_pred             H---HHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence            3   35567778889999999999999999999999999999885 9999988887766665543

>PRK10504 putative transporter; Provisional

Probab=100.00  E-value=1.3e-35  Score=286.35  Aligned_cols=331  Identities=19%  Similarity=0.213  Sum_probs=273.4

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ...|.+.+++|.++.+.+++.+.+.++..++.+++|+++||+||||+++.+.++.+++.+++.++++++.+++.|+++|+
T Consensus        31 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~  110 (471)
T PRK10504         31 TALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGV  110 (471)
T ss_pred             HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence            35688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++| +++|++++++.....++|..++|.+++.+.++.|||+.|++......+..+......|+.+
T Consensus       111 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~  189 (471)
T PRK10504        111 GGAMMVPVGRLTVMKIVP-REQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT  189 (471)
T ss_pred             hhHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            999999999999999999 5999999999999999999999999999999999999999988877776666655544332


Q ss_pred             CCCCC-----------------------C--------------------------------CchhhhhccChHHHHHHHH
Q psy14075        176 VKQEV-----------------------E--------------------------------PPTLKSLVMDPYILIAAGA  200 (414)
Q Consensus       176 ~~~~~-----------------------~--------------------------------~~~~~~~~~~~~~~~~~~~  200 (414)
                      .+..+                       +                                +....+++|||.++.....
T Consensus       190 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~  269 (471)
T PRK10504        190 MQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAG  269 (471)
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHH
Confidence            11100                       0                                0001246788888888777


Q ss_pred             HHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh--
Q psy14075        201 ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA--  278 (414)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~--  278 (414)
                      .++..........+.|.|+++..|.++.+.++......++.+++.++.+++.||+++|+.+..+..+..+..+++.+.  
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~  349 (471)
T PRK10504        270 SFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL  349 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc
Confidence            777777777777889999988889999999999998899999999999999999999999988888777765555443  


Q ss_pred             -hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075        279 -RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFE  350 (414)
Q Consensus       279 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~  350 (414)
                       ++.+......++.|++.+...+....   ...+..|++.+|.++|+.++...+|..+|+.+.|.+.+..|+.
T Consensus       350 ~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~  419 (471)
T PRK10504        350 LGWYYLLPFVLFLQGMVNSTRFSSMNT---LTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ  419 (471)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence             22222233455566666666544443   3456777888999999999999999999999999999887764

>PRK12307 putative sialic acid transporter; Provisional

Probab=100.00  E-value=5.7e-36  Score=285.36  Aligned_cols=336  Identities=15%  Similarity=0.086  Sum_probs=257.0

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|+++|++
T Consensus        40 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g  119 (426)
T PRK12307         40 IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMG  119 (426)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            45788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+..++....++.|++| +|+|++++++...+.++|.++++.+.+.+.+..+||+.|++..+..++... .....|++++
T Consensus       120 ~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~-~~~~~p~~~~  197 (426)
T PRK12307        120 MAGEYACASTYAVESWP-KHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIY-IRARAPESKE  197 (426)
T ss_pred             HhhHHHHHHHHHHHhCC-HhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHH-HHHHCCCChH
Confidence            99999999999999999 499999999999999999999999999998889999999886544333222 2222222211


Q ss_pred             C------CCCC---------CchhhhhccChHHHHHHHHHH---HHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHH
Q psy14075        177 K------QEVE---------PPTLKSLVMDPYILIAAGAIT---FANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPAS  238 (414)
Q Consensus       177 ~------~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~  238 (414)
                      .      .+++         ..++++++|+|.++.......   +..........++|.|+++ .|.++.+.+.......
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~  276 (426)
T PRK12307        198 WEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAA  276 (426)
T ss_pred             HHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence            0      0000         014567778877664433222   2222333456788999887 5999888999989999


Q ss_pred             HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHh--hhhhhhhhhhhhhhccccc
Q psy14075        239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGM--VDSSMMPELGYLVDIRHTA  316 (414)
Q Consensus       239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~  316 (414)
                      ++.++++++.+++.||++||+....+.++..+..+.+...++........++++.+...  ..+..+   ....|..|++
T Consensus       277 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~  353 (426)
T PRK12307        277 FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVP---KFLYDYFPLE  353 (426)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHH---HHHHHhCcHH
Confidence            99999999999999999999988888777666554443332222222223333333221  111112   2356888999


Q ss_pred             chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075        317 VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI  358 (414)
Q Consensus       317 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~  358 (414)
                      .||++.|+.+...++++.++|.+.|++.+..|+.....+...
T Consensus       354 ~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~  395 (426)
T PRK12307        354 VRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA  395 (426)
T ss_pred             HHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence            999999999999999999999999999999997655444333

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=100.00  E-value=4.2e-35  Score=276.19  Aligned_cols=338  Identities=14%  Similarity=0.156  Sum_probs=263.0

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ...|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++.++++++.+++.|+++|+
T Consensus        24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~  103 (392)
T PRK10473         24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGI  103 (392)
T ss_pred             hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+......+|++
T Consensus       104 ~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~  182 (392)
T PRK10473        104 GAGCCYVVAFAILRDTLD-DRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR  182 (392)
T ss_pred             hhhHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            999999999999999999 4999999999999999999999999999888899999999999888877776666655543


Q ss_pred             CCCCCC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhh
Q psy14075        176 VKQEVE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL  251 (414)
Q Consensus       176 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l  251 (414)
                      ++++++    .++.++.+|+|+++...+...+.......+..+.|.++++.+|+++.+.+......+++.+++.++.+++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l  262 (392)
T PRK10473        183 PARAPAASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFA  262 (392)
T ss_pred             CcccCCccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322211    1234567788887765555544444445566677888888889999999999999999999999999999


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHH
Q psy14075        252 GHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCL  331 (414)
Q Consensus       252 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~  331 (414)
                      .||+++|+.+..+..+..++.+.+...++.+.......+.+.+.+...+...     ..+..|.++++   |.......+
T Consensus       263 ~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-----~~~~~~~~~~~---g~~~~~~~~  334 (392)
T PRK10473        263 LGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVAM-----SQALGPFSLRA---GVASSTLGI  334 (392)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-----HHHhccCcccc---cHHHHHHHH
Confidence            9999999999888888877777666655444334444444444444332211     11222333332   333445567


Q ss_pred             HHhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy14075        332 GFAIGPAMSGTLVNTIGFEWMLFIIAILDFM  362 (414)
Q Consensus       332 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~  362 (414)
                      +..+++.+.+++.+..|+.......+...+.
T Consensus       335 ~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~  365 (392)
T PRK10473        335 AQVCGSSLWIWLAAVLGISAWNMLIGILIAC  365 (392)
T ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence            8888888888888888876555444443333

>PRK03633 putative MFS family transporter protein; Provisional

Probab=100.00  E-value=2.2e-35  Score=276.88  Aligned_cols=343  Identities=14%  Similarity=0.144  Sum_probs=264.2

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      +..|.+.+++|.|+.++|++.+.+.+++.+++++.|+++||+||||++..+.++.+++.+++++++|++.+++.|+++|+
T Consensus        27 ~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~  106 (381)
T PRK03633         27 TLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGI  106 (381)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+.+.+..++ ++|+++++......++|..+||.+++.+.+...|...+. .+..........+...+++ 
T Consensus       107 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-  183 (381)
T PRK03633        107 GCAMIWVVVESALMCSGTS-RNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFTRILNQ-  183 (381)
T ss_pred             HHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHhcccCC-
Confidence            9999988888888888884 899999999999999999999999999877544443333 2222222222222122222 


Q ss_pred             CCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075        176 VKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM  255 (414)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~  255 (414)
                      ++++++..+.++.+|+|.++......+.....+.....++|.|+++ .|.++.+.+.......++.+++++..+++.||+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~  262 (381)
T PRK03633        184 QAENHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF  262 (381)
T ss_pred             CCCCCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc
Confidence            2222223455677888887765544444445556667789999887 599988999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075        256 GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI  335 (414)
Q Consensus       256 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i  335 (414)
                      ++|+.+..+.....++.+.+.  .. ........+.|++.....+.   ..+...|..|+++++...+..+...++|..+
T Consensus       263 ~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~i  336 (381)
T PRK03633        263 GRLLVLRVQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPV---AMAWACEKVEHHELVAMNQALLLSYTVGSLL  336 (381)
T ss_pred             CcHHHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHH---HHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999988888777777655443  11 22223444555554444333   3344567777777788888888889999999


Q ss_pred             HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075        336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  368 (414)
                      ||.+.|++.|++|+++.|.+.+.+.++..+..+
T Consensus       337 gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~  369 (381)
T PRK03633        337 GPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL  369 (381)
T ss_pred             HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999988777766544443

>PRK12382 putative transporter; Provisional

Probab=100.00  E-value=3.6e-35  Score=276.70  Aligned_cols=340  Identities=17%  Similarity=0.198  Sum_probs=262.6

Q ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---h-----hhhHHHHHHHHHH
Q psy14075         21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---F-----GRTYGVLFLARSL   92 (414)
Q Consensus        21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-----~~~~~~l~~~r~l   92 (414)
                      +.+|+|.|++++|++.+++.+++.++++++|+++||+||||++..+.+...++.+...   +     .++++.+++.|++
T Consensus        42 l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l  121 (392)
T PRK12382         42 VHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLI  121 (392)
T ss_pred             HHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999888777654332   1     3588999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      +|++.+...+...+++.|++|+ |+|++++++.+.+.+.|..++|++++.+.+++|||+.+.+..+..++...... ..|
T Consensus       122 ~G~~~~~~~~~~~~~~~~~~~~-~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~  199 (392)
T PRK12382        122 LGFGESQLLTGALTWGLGLVGP-KHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNG-TVR  199 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCc-cccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHH-hcc
Confidence            9999999999888999999994 99999999999999999999999999999989999887766655444333222 222


Q ss_pred             CCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075        173 PGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG  252 (414)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~  252 (414)
                      +++++ ++++.+.++..|  .++...+...+..........+.|.|+++ .|.+  +.+.......++.++++++.|++.
T Consensus       200 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~  273 (392)
T PRK12382        200 KVPAH-AGERPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMP  273 (392)
T ss_pred             CCCCC-cccCchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            22111 112223333332  22222222333344455566778888876 4654  356666677888889999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHH
Q psy14075        253 HRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLG  332 (414)
Q Consensus       253 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g  332 (414)
                      ||+++|+.+..+..+..++.+.+...++.+......++.|++.+...+...   ....+..|+++||++.|+.+...++|
T Consensus       274 ~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g  350 (392)
T PRK12382        274 DRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALG---VEVVKRVPSQVRGTALGGYAAFQDIA  350 (392)
T ss_pred             HhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            999999998888888888877776666666666666777777776544333   34567788899999999999999999


Q ss_pred             HhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        333 FAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       333 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ..++|.+.|.+.|+.||+..|.+.+.+.+++.++.+...
T Consensus       351 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  389 (392)
T PRK12382        351 YGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF  389 (392)
T ss_pred             HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999888888777665443

>TIGR00897 2A0118 polyol permease family

Probab=100.00  E-value=7.5e-35  Score=275.02  Aligned_cols=347  Identities=14%  Similarity=0.192  Sum_probs=267.8

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHH
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---F-GRTYGVLFLARSLQ   93 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~   93 (414)
                      .|++.+|+|.|+++.|++.+.+.+++.+++++.|+++||+||||++..+.++.+++.+++.   + .++++.+++.|++.
T Consensus        36 ~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~  115 (402)
T TIGR00897        36 LSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIR  115 (402)
T ss_pred             HHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHH
Confidence            4667789999999999999999999999999999999999999999999999998877653   3 35888999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhh-hhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV-LIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~-~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      |++.+...+...+.+.+++|+ ++|++++|+.+...++|. .++|++++.+.+..||+..++......++..++.+++.+
T Consensus       116 G~g~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  194 (402)
T TIGR00897       116 GLGYPLFAYSFLVWVVYNTKQ-DNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK  194 (402)
T ss_pred             HcchHHHHhHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence            999988888888889999995 999999999999999997 689999999998889776666554444443344444333


Q ss_pred             CCCCC--CC--CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhh
Q psy14075        173 PGVVK--QE--VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIG  244 (414)
Q Consensus       173 ~~~~~--~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~  244 (414)
                      +++++  ++  .+.    +++++++|+|+++...+..++.........++.|.|+++ +|.++.+.+.......++..++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig  273 (402)
T TIGR00897       195 DIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVF  273 (402)
T ss_pred             CCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHH
Confidence            32111  11  111    124457889999888777777777778888899999866 7999999999888899999999


Q ss_pred             hhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075        245 TNLFGPLGHRMGRYLAAL-LGLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY  318 (414)
Q Consensus       245 ~~~~g~l~d~~~~~~~~~-~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (414)
                      ++..|+++||++||+... .+.....++.+.+..     .++.+...+..++.|++.+...+    ......+. ++++|
T Consensus       274 ~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~-~~~~~  348 (402)
T TIGR00897       274 NVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP----LAAVFPTL-APKHK  348 (402)
T ss_pred             HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH----HHHHHHhh-Ccchh
Confidence            999999999999887653 333333333222221     12344445566666766665422    22223343 45678


Q ss_pred             hhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        319 GSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       319 g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      |++.|+.+....+++.++|.+.|.+.|..|+...+++.+++.+++.++..+.|
T Consensus       349 g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~~  401 (402)
T TIGR00897       349 GAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFIR  401 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999888888777766654

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=100.00  E-value=2.2e-35  Score=286.11  Aligned_cols=328  Identities=17%  Similarity=0.232  Sum_probs=278.2

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ...|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||++++.+.++++++.+++++++|++.+++.|+++|+
T Consensus        23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~  102 (485)
T TIGR00711        23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGF  102 (485)
T ss_pred             HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++|+ ++|++++++......+|..++|.+++++.++.+||+.|++.+.+.++..++..+..|+++
T Consensus       103 ~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~  181 (485)
T TIGR00711       103 GGGPLIPLSFSTLLNIYPP-EKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDK  181 (485)
T ss_pred             hhhhHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence            9999999999999999994 999999999999999999999999999999999999999998888777766666555432


Q ss_pred             CCCCCC------------------------Cc---------------------------------hhhhhccChHHHHHH
Q psy14075        176 VKQEVE------------------------PP---------------------------------TLKSLVMDPYILIAA  198 (414)
Q Consensus       176 ~~~~~~------------------------~~---------------------------------~~~~~~~~~~~~~~~  198 (414)
                      ++++++                        +.                                 ...+.+|+|+++...
T Consensus       182 ~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (485)
T TIGR00711       182 PAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGC  261 (485)
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHH
Confidence            221110                        00                                 012356777777777


Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL-  277 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-  277 (414)
                      +..++..........++|.|+++.+|.++.+.++......++.+++.++.|++.||++||+.+..+..+.+++...+.+ 
T Consensus       262 ~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~  341 (485)
T TIGR00711       262 VYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFT  341 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhcc
Confidence            7777777777888889999999999999999999999999999999999999999999999988888888887776652 


Q ss_pred             -h--hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075        278 -A--RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI  347 (414)
Q Consensus       278 -~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  347 (414)
                       .  .+.+......++.|++.+...+...   ....+..|++++|++.|+.+..+.+|+.+|+.+.|.+.++.
T Consensus       342 ~~~~~~~~~~~~~~~l~g~g~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~  411 (485)
T TIGR00711       342 FTPDTPFLAIALPQFIRGFGMGCFFMPLT---TIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR  411 (485)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             1  2334455566778888877644333   33456678899999999999999999999999999998753

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=100.00  E-value=5.6e-35  Score=276.19  Aligned_cols=342  Identities=15%  Similarity=0.160  Sum_probs=264.0

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      .+.+|.+.++++.+.++.++..+.+.+++.++++++|+++||+|||+++..+.++++++.+++++++|++.++++|+++|
T Consensus        36 ~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G  115 (413)
T PRK15403         36 QPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQG  115 (413)
T ss_pred             ccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            44668899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      ++.+...+...+++.|++| +++|++++++......+|..+||.+++.+.++.|||+.|++.++..++..+..++..||+
T Consensus       116 i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~  194 (413)
T PRK15403        116 TSICFIATVGYVTVQEAFG-QTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET  194 (413)
T ss_pred             HHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            9998777777888999999 489999999999999999999999999999989999999999998888766655555554


Q ss_pred             CCCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075        175 VVKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF  248 (414)
Q Consensus       175 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~  248 (414)
                      +++++++      .+++++++|||+++...+...+.......+..+.|.++++.+|.++.+.++.......+..++..+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~  274 (413)
T PRK15403        195 VKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIV  274 (413)
T ss_pred             ccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3322211      1245678899999988888777777777888889999999889999999998888888888888888


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHh
Q psy14075        249 GPLGHRMGRYLAALLGLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYA  323 (414)
Q Consensus       249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g  323 (414)
                      +++.+|..+++.......+..++.+++..     .++.+......++.+++.+...+..... +....   ...+|++.+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~-al~~~---~~~~G~a~a  350 (413)
T PRK15403        275 ARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRF-TLFSN---NLPKGTVSA  350 (413)
T ss_pred             HHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHH-HhccC---CCCCcHHHH
Confidence            77765444333332222222222222211     1222223456666777777765544432 11112   223599999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy14075        324 IGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFM  362 (414)
Q Consensus       324 ~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~  362 (414)
                      +.+.....+...++...|++.+. +-...|...+++..+
T Consensus       351 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~  388 (413)
T PRK15403        351 SLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGV  388 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence            99999999999999999988776 555566555544443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=100.00  E-value=8.8e-36  Score=286.94  Aligned_cols=342  Identities=14%  Similarity=0.182  Sum_probs=265.4

Q ss_pred             hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhhhh
Q psy14075         24 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--RTYGVLFLARSLQGIGSSCSS  101 (414)
Q Consensus        24 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~  101 (414)
                      |++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++  .+++.+++.|+++|++.+...
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~  149 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS  149 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence            789999999999999999999999999999999999999999999999998887554  568899999999999999999


Q ss_pred             hhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC-
Q psy14075        102 VSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQPGVVKQE-  179 (414)
Q Consensus       102 ~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-  179 (414)
                      +....+++|++|+ ++|++++++...+..+|..+++++++.+.+.. +||+.|++.++..++..++.+.+.++++++++ 
T Consensus       150 ~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~  228 (465)
T TIGR00894       150 PATHKIIVKWAPP-KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC  228 (465)
T ss_pred             hhHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC
Confidence            9999999999994 99999999999999999999999999999884 99999999999888877776666554332110 


Q ss_pred             --------------------CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHH
Q psy14075        180 --------------------VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASI  239 (414)
Q Consensus       180 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~  239 (414)
                                          +++.++++++++|.+|...+..++.......+.+|+|.|+++.+|.+..+.++..+...+
T Consensus       229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~  308 (465)
T TIGR00894       229 ISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL  308 (465)
T ss_pred             CCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence                                011246778899999999998888888888899999999999999999999999999999


Q ss_pred             HHHhhhhhhhhhhhhhhhHHH--------HHHHHHHH--HHHHHHhhh-hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075        240 SYLIGTNLFGPLGHRMGRYLA--------ALLGLLII--GICLMMIPL-ARNINHLIVPNAGLGFAIGMVDSSMMPELGY  308 (414)
Q Consensus       240 ~~~~~~~~~g~l~d~~~~~~~--------~~~~~~~~--~i~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  308 (414)
                      +..++.++.|+++||+++|+.        +..+....  .+..+.... ..+.........+.+.+.+...+...   ..
T Consensus       309 ~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~  385 (465)
T TIGR00894       309 FAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVL---IN  385 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhh---hc
Confidence            999999999999999764321        11111111  111111111 12222222333333333332222211   12


Q ss_pred             hhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh--c-hHHHHHHHHHHHHHHHHHHHHh
Q psy14075        309 LVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI--G-FEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       309 ~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      ..+..| +.+|.+.|+.+....+++.++|.+.|.+.+..  + |...|.+.++..+++.++....
T Consensus       386 ~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~  449 (465)
T TIGR00894       386 SLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF  449 (465)
T ss_pred             hhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence            334444 47899999999999999999999999988753  3 7888888887777776655443

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=100.00  E-value=4.5e-35  Score=279.03  Aligned_cols=349  Identities=15%  Similarity=0.111  Sum_probs=248.0

Q ss_pred             cchhhhhhhc---CCcchHHHH---HHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH------
Q psy14075         17 ARENRHKYLM---GETKAVGVM---FGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG------   84 (414)
Q Consensus        17 ~~~~~~~~~g---~s~~~~g~~---~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~------   84 (414)
                      ..|.+.++++   .+..+.+..   .+...++..++++++|+++||+||||++..+.++++++++++++++++.      
T Consensus        44 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (432)
T PRK10406         44 CSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWA  123 (432)
T ss_pred             HHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Confidence            3467778884   455544444   4444555559999999999999999999999999999999999988864      


Q ss_pred             --HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHH
Q psy14075         85 --VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFL  154 (414)
Q Consensus        85 --~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~  154 (414)
                        .+++.|+++|++.|..++...++++|++|+ ++|+++.++.+.+...|..+++.+...+.        +.+|||++|+
T Consensus       124 ~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~-~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~  202 (432)
T PRK10406        124 PALLLLARLFQGLSVGGEYGTSATYMSEVAVE-GRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFA  202 (432)
T ss_pred             HHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHH
Confidence              589999999999999999999999999995 99999999999998889888887765543        2579999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCCC---CCCCchhhhhccChHHHHHHHHHHH-HHHHHHhhhhchHHHHHHHhCCCccch
Q psy14075        155 ILSALALGDGLLQLLLLQPGVVKQ---EVEPPTLKSLVMDPYILIAAGAITF-ANTGIAMLEPSLPIWMMDTMGADKWQQ  230 (414)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~  230 (414)
                      +.+++.++.... ....||+++.+   +++..++++++|+|+.+...+...+ ....++.+..|+|.|+++.+|.+..+.
T Consensus       203 i~~~~~ll~~~~-~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~  281 (432)
T PRK10406        203 LGAVLAVVALWL-RRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVA  281 (432)
T ss_pred             HHHHHHHHHHHH-HhcCCCCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence            988877665433 23333332211   1122357788899888766555444 356677788899999988889998888


Q ss_pred             hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh--h--hhhhHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy14075        231 GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP--L--ARNINHLIVPNAGLGFAIGMVDSSMMPEL  306 (414)
Q Consensus       231 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~--~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  306 (414)
                      +.......+...++..+.|+++||++||+.+..+..+..+....+.  .  .++.........+..+..+...+   ...
T Consensus       282 ~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  358 (432)
T PRK10406        282 SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTS---ISG  358 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH---HHH
Confidence            8888888888888889999999999999877766554433322111  1  11222111112212222222222   122


Q ss_pred             hhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        307 GYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       307 ~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ....|.+|++.|+++.|+.+...++ .+...|.+.+.+ +..| +...+++.++..+++.+..++.+
T Consensus       359 ~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~  424 (432)
T PRK10406        359 ILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLH  424 (432)
T ss_pred             HHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence            3467899999999999998877664 344577777754 5556 55566666666666665555543

>PRK03893 putative sialic acid transporter; Provisional

Probab=100.00  E-value=3.3e-35  Score=285.63  Aligned_cols=345  Identities=17%  Similarity=0.162  Sum_probs=252.5

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++.+++.+++++++|++.+++.|++.|++
T Consensus        42 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~  121 (496)
T PRK03893         42 VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMG  121 (496)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            45888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+...+...+++.|++| +++|++++++...+.++|..++|.+++.+.++++||+.|++..+..++. +......|++++
T Consensus       122 ~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~-~~~~~~~p~~~~  199 (496)
T PRK03893        122 MAGEYGSSATYVIESWP-KHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFA-LWLRKNLPEAED  199 (496)
T ss_pred             HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-HHHHHhCCCchh
Confidence            99999999999999999 5999999999999999999999999999999999999998755443332 222222333221


Q ss_pred             -C-CCCCC---chhhh-hccC-hHHHH-----------------------------------------------------
Q psy14075        177 -K-QEVEP---PTLKS-LVMD-PYILI-----------------------------------------------------  196 (414)
Q Consensus       177 -~-~~~~~---~~~~~-~~~~-~~~~~-----------------------------------------------------  196 (414)
                       + +++++   .+..+ ..++ +..+.                                                     
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (496)
T PRK03893        200 WKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVM  279 (496)
T ss_pred             hhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence             1 10011   11111 1111 10000                                                     


Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy14075        197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP  276 (414)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~  276 (414)
                      .....+...........++|.|+++.+|++..+.+.+.+...++.+++.++.|+++||+++|+.+..+..+..+..+.+.
T Consensus       280 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~  359 (496)
T PRK03893        280 LMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVF  359 (496)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence            00000000001112346789999877899999999999999999999999999999999999988877766665544333


Q ss_pred             hhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHH
Q psy14075        277 LAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLF  354 (414)
Q Consensus       277 ~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~  354 (414)
                      ...  +.+......++.+.......+..   .+...+..|++.||+++|+.+....+|+.+||.+.|.+.|.+|++..+.
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~  436 (496)
T PRK03893        360 AIGGANVWVLGLLLFFQQMLGQGISGLL---PKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALA  436 (496)
T ss_pred             hccccHHHHHHHHHHHHHHHhcccchhh---HHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHH
Confidence            322  22222222222222211121222   2345678888999999999999999999999999999999999988876


Q ss_pred             HHHHHHHHHHHH
Q psy14075        355 IIAILDFMYAPL  366 (414)
Q Consensus       355 ~~~~~~~~~~~~  366 (414)
                      ..+.+..+..+.
T Consensus       437 ~~~~~~~~~~~~  448 (496)
T PRK03893        437 SLSFSLTFVVIL  448 (496)
T ss_pred             HHHHHHHHHHHH
Confidence            655544443333

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=100.00  E-value=1.6e-34  Score=271.77  Aligned_cols=333  Identities=20%  Similarity=0.206  Sum_probs=269.3

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      +..|.+.+++|.|+.+++++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|+
T Consensus        26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~  105 (385)
T TIGR00710        26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAF  105 (385)
T ss_pred             ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence            45688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.++.+||+.|++.++..++..+..++..||++
T Consensus       106 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (385)
T TIGR00710       106 GASAGSVISQALVRDIYP-GEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL  184 (385)
T ss_pred             chhHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999 4999999999999999999999999999999999999999998888777776666655544


Q ss_pred             CCCCCC-----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhh
Q psy14075        176 VKQEVE-----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGP  250 (414)
Q Consensus       176 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~  250 (414)
                      ++++++     .+++++.+|+|+++...+...+..........+.|.++++.+|.++.+.+.+.....++.+++.++.++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~  264 (385)
T TIGR00710       185 PYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGR  264 (385)
T ss_pred             CCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            332211     123456788998888777766666677777888899998889999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075        251 LGHRMGRYLAALLGLLIIGICLMMIPLAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG  325 (414)
Q Consensus       251 l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  325 (414)
                      +.||+++|+.+..+..+..++.+++....     +........++.|++.+...+...   ....|..| +.++++.++.
T Consensus       265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~-~~~g~~~~~~  340 (385)
T TIGR00710       265 FIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAM---AYALEDFP-HVAGTASALF  340 (385)
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH---HHHhccCc-ccchHHHHHH
Confidence            99999999988888777776655554432     222333345556666665544332   33445555 5679999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075        326 DVAFCLGFAIGPAMSGTLVNTIGFEWML  353 (414)
Q Consensus       326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~  353 (414)
                      +.....++.+.+.+.+.+.+..++...+
T Consensus       341 ~~~~~~~g~i~~~~~~~~~~~~~~~~~~  368 (385)
T TIGR00710       341 GTLRLVLGAIVGYLVSLIHGNTAWPMSL  368 (385)
T ss_pred             HHHHHHHHHHHHHHHHhccccChHHHHH
Confidence            9888877777777777555444444333

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=100.00  E-value=8.7e-35  Score=273.87  Aligned_cols=343  Identities=16%  Similarity=0.148  Sum_probs=268.3

Q ss_pred             hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhh
Q psy14075         20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSC   99 (414)
Q Consensus        20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~   99 (414)
                      .+.+++|.|+.++|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+.
T Consensus        36 ~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~  115 (400)
T PRK11646         36 RFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTL  115 (400)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCC-
Q psy14075        100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQ-  178 (414)
Q Consensus       100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-  178 (414)
                      ..|...+++.|++|+ ++|++++++.+...++|..+||.+++.+. .++||+.|++.++..++..++..+..||+++++ 
T Consensus       116 ~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (400)
T PRK11646        116 FDPPRTALVIKLIRP-HQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV  193 (400)
T ss_pred             HHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence            899999999999994 99999999999999999999999999998 679999999998887776655555554432211 


Q ss_pred             -CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh-hhh
Q psy14075        179 -EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH-RMG  256 (414)
Q Consensus       179 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d-~~~  256 (414)
                       ++..+++++.+++|+++...+..+...........++|.|+++..+ ++.+.+.+....++....+....+++.| |.+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~  272 (400)
T PRK11646        194 RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFR  272 (400)
T ss_pred             chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence             1122356678889988765555444444444455678999888644 6678888888777766665555566665 456


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHH
Q psy14075        257 RYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIG  336 (414)
Q Consensus       257 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig  336 (414)
                      .++.+..+..+.+++.+.+...++.+......++.+++.+...+...   +...+..|++++|+++|+.+...++|..+|
T Consensus       273 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~---~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig  349 (400)
T PRK11646        273 LEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARE---TLSASLADARARGSYMGFSRLGLALGGAIG  349 (400)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHH---HHHHhcCCcccchhhhhHHHHHHHHHHHhc
Confidence            56666777777777777776666665555555666777665544433   345677888999999999999999999999


Q ss_pred             HHHHHHHHhhhc----hHHHHHHHHHHHHHHHHHHH
Q psy14075        337 PAMSGTLVNTIG----FEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       337 ~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~  368 (414)
                      |.+.|++.|..+    ....+...+...+++.+...
T Consensus       350 ~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (400)
T PRK11646        350 YIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY  385 (400)
T ss_pred             ccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence            999999999753    34556555555555554443

>TIGR00891 2A0112 putative sialic acid transporter

Probab=100.00  E-value=5e-35  Score=276.95  Aligned_cols=335  Identities=19%  Similarity=0.208  Sum_probs=258.2

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus        34 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~  113 (405)
T TIGR00891        34 VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIG  113 (405)
T ss_pred             HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence            45788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC--ChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG--KTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      .+...+...+++.|++|+ ++|++++++.+.+..+|..+++.+++.+.+..+  ||+.|++.++..++..+... ..||+
T Consensus       114 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~-~~~~~  191 (405)
T TIGR00891       114 MGGEYGSSAAYVIESWPK-HLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRK-NIPEA  191 (405)
T ss_pred             hhhhhHHHHHHHHHhCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence            999999999999999994 999999999999999999999999999988776  99999887666555444333 33333


Q ss_pred             CCCC--CCC----CchhhhhccC-----------------------hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCC
Q psy14075        175 VVKQ--EVE----PPTLKSLVMD-----------------------PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGA  225 (414)
Q Consensus       175 ~~~~--~~~----~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  225 (414)
                      ++.+  +++    ....++..++                       +.+........+.+........++|.|+.+.+|.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  271 (405)
T TIGR00891       192 EDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGL  271 (405)
T ss_pred             hhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCC
Confidence            2111  000    0111111110                       0122222333333444456667889999888899


Q ss_pred             CccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075        226 DKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM-MIPLARNINHLIVPNAGLGFAIGMVDSSMMP  304 (414)
Q Consensus       226 ~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  304 (414)
                      +..+.+.+.....++.+++.++.+++.||++||+.+..+.....+... .+...++.+...+..++.++..+...+... 
T Consensus       272 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  350 (405)
T TIGR00891       272 SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILP-  350 (405)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHH-
Confidence            999999999999999999999999999999999988877665533322 222233333333443445544444433333 


Q ss_pred             hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHH
Q psy14075        305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFII  356 (414)
Q Consensus       305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~  356 (414)
                        ....|..|++.|+++.|+.+...++|..++|.+.|.+.|..| |+..+...
T Consensus       351 --~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~  401 (405)
T TIGR00891       351 --KHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL  401 (405)
T ss_pred             --HHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence              345678889999999999999999999999999999999999 87766543

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=100.00  E-value=1.3e-34  Score=274.55  Aligned_cols=350  Identities=17%  Similarity=0.244  Sum_probs=276.3

Q ss_pred             cchhhhhhhcCCcch-----HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKA-----VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARS   91 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~-----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~   91 (414)
                      ..|.+.+++|.+..+     .|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.+.++++.+++.|+
T Consensus        36 ~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (408)
T PRK09874         36 FLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRA  115 (408)
T ss_pred             hHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            468888999998665     489999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075         92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus        92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      +.|++.+ ..+...+++.+++| +++|++++++......+|..++|.+++.+.+..+||+.|++.+++.++..+..++..
T Consensus       116 ~~g~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (408)
T PRK09874        116 LLGLLGG-FVPNANALIATQVP-RNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCI  193 (408)
T ss_pred             HHHHhhh-hHHhHHHHHHHhcC-HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999765 45777788999999 499999999999999999999999999999989999999999988877776666655


Q ss_pred             cCCCCC-CCCCC---chhhhhccChHHHHHH-HHHHHHHHHHHhhhhchHHHHHHHhCCCcc---chhhHhHHHHHHHHh
Q psy14075        172 QPGVVK-QEVEP---PTLKSLVMDPYILIAA-GAITFANTGIAMLEPSLPIWMMDTMGADKW---QQGVSFLPASISYLI  243 (414)
Q Consensus       172 ~~~~~~-~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~~  243 (414)
                      ++++++ +++++   ++..+.+++|+++... ...............+++.|..+..+....   ..+.+....+++.++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~  273 (408)
T PRK09874        194 RENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALL  273 (408)
T ss_pred             ccCcccccchhhhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence            554322 11111   2234456777665432 333334444455667788888775443221   234555666788888


Q ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHh
Q psy14075        244 GTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYA  323 (414)
Q Consensus       244 ~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g  323 (414)
                      +.+..|++.||++||+.+..+..+..++.+.....++.+...+..++.|++.+...+...+.   ..+..|++.+|+.++
T Consensus       274 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~g~~~~  350 (408)
T PRK09874        274 SAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTL---LVYNSSNQIAGRIFS  350 (408)
T ss_pred             HHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHH---HHHhCCcccceeeeh
Confidence            89999999999999999888888777777666666666666667777888887775554433   446667788899999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        324 IGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       324 ~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      +.+....+|..+||.+.|.+.+..||+..|.+.+++.+++.+..+...
T Consensus       351 ~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~  398 (408)
T PRK09874        351 YNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL  398 (408)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999888888777665543

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=100.00  E-value=1.8e-34  Score=271.11  Aligned_cols=345  Identities=19%  Similarity=0.173  Sum_probs=266.8

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..+.+.+|++.++.+.+++.+.+.+++.+.+++.|+++||+||||+++++.++++++.+++.++.+.   ++.|+++|++
T Consensus        25 ~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~  101 (393)
T PRK11195         25 AAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIG  101 (393)
T ss_pred             HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence            3456678999999999999999999999999999999999999999999999999999888777664   7889999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+...|+..+++.|++| +++|++++++.+....+|.++||.+++.+.+. .|+..+.+.+...++..+.. +..|++++
T Consensus       102 ~a~~~pa~~a~i~~~~~-~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~-~~l~~~~~  178 (393)
T PRK11195        102 AAAYSPAKYGILTELLP-GEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALFN-LFIPRLGA  178 (393)
T ss_pred             HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-hcCCCCcc
Confidence            99999999999999999 59999999999999999999999999999985 48877777766554443333 34443322


Q ss_pred             CCCC-C--C--------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhh
Q psy14075        177 KQEV-E--P--------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT  245 (414)
Q Consensus       177 ~~~~-~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~  245 (414)
                      ++++ +  .        ..++.++++|.+........+.+.........+|.|+++.+|.++.+.|......+++.+++.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~  258 (393)
T PRK11195        179 RRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA  258 (393)
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence            2111 1  1        113456777776655444444445555566677888888899999999999999999999999


Q ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc-hhhHHhH
Q psy14075        246 NLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV-YGSVYAI  324 (414)
Q Consensus       246 ~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~  324 (414)
                      ++.+++.||.++++.+..+. +.++..+.+...++.+......++.|++.+...+...+.   ..+..|++. +|++.++
T Consensus       259 ~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~---~q~~~~~~~~~g~~~a~  334 (393)
T PRK11195        259 GAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNAL---LQHRGHVLVGAGHSIAV  334 (393)
T ss_pred             HHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHH---HHhhCcccccchhHHHH
Confidence            99999999988887776664 334444444445555555566667788877765544444   334444444 6999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        325 GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       325 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      .+...+++..++..+.+.+ +.+|.+..+.+.+...+.+..+.+.++.
T Consensus       335 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (393)
T PRK11195        335 QNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWRW  381 (393)
T ss_pred             HhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999855 6789888888877777766666655544

>PRK15011 sugar efflux transporter B; Provisional

Probab=100.00  E-value=1.1e-33  Score=266.20  Aligned_cols=346  Identities=15%  Similarity=0.147  Sum_probs=252.0

Q ss_pred             hhhhhhcCCcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075         20 NRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPM-FTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS   97 (414)
Q Consensus        20 ~~~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~   97 (414)
                      .+.+++|.|++++|++.+...+ ++.++.+++|+ .||+||||.+ ..+.+..+++..+.+++++++.+++.+.+.|...
T Consensus        41 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  119 (393)
T PRK15011         41 FLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFG  119 (393)
T ss_pred             HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            3578999999999999877655 55555555555 9999999875 5566666788888889999999877765555555


Q ss_pred             hhhhhhHHHHHhhcCCCcchh--hHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         98 SCSSVSGMGMLAERYPDDRER--GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        98 ~~~~~~~~~~i~~~~~~~~~r--~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +...|...+++.|+.+ +++|  +...++.+.+.++|.+++|++++.+.+++|||..|++.++..++..+..++..||.+
T Consensus       120 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  198 (393)
T PRK15011        120 STANPQMFALAREHAD-KTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR  198 (393)
T ss_pred             HhhHHHHHHHHHHHhh-hccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence            6778888888888876 3544  345688899999999999999999999999999999999888887777666666554


Q ss_pred             CCCCCCCchhhhhccChH-HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh
Q psy14075        176 VKQEVEPPTLKSLVMDPY-ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR  254 (414)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~  254 (414)
                      +++++++.+.+...++++ .+...............+..+.|.|+++.+|.++.+.+.+.....++.+++.++.|+++||
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr  278 (393)
T PRK15011        199 KELPLATGTLEAPRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR  278 (393)
T ss_pred             CCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            332221112222223332 3333333344444555566789999988899999999988888778888899999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075        255 MGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA  334 (414)
Q Consensus       255 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~  334 (414)
                      +++|+.+..+.....+.+..+...++.+......++.+++.+...+....   ...|..|+ ++|++.++.+...++|..
T Consensus       279 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~---~~~~~~p~-~~g~~~~~~~~~~~lg~~  354 (393)
T PRK15011        279 LGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGML---YFQDLMPG-QAGSATTLYTNTSRVGWI  354 (393)
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCCC-CcchHHHHHHHHHHHHHH
Confidence            99998877766655555444444455544444445555555544333322   24465664 589999999999999999


Q ss_pred             HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        335 IGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       335 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ++|.+.|.+.|..||+..|.+.+++.+++.+..+..+
T Consensus       355 ~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  391 (393)
T PRK15011        355 IAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIK  391 (393)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999888888777776666554

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=100.00  E-value=3.4e-34  Score=282.51  Aligned_cols=350  Identities=11%  Similarity=0.037  Sum_probs=273.9

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      .+|.+.+++|.+..+.+++.+++.++.+++++++|+++||+|||++++++.++.+++.++++++++++.++++|++.|++
T Consensus       189 ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g  268 (742)
T TIGR01299       189 VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFG  268 (742)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            46888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-------------cCChhHHHHHHHHHHHH
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-------------VGKTAPFLILSALALGD  163 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-------------~gw~~~f~~~~~~~~~~  163 (414)
                      .+...+...+++.|++| .++|++.++++.+++.+|.++++.++..+...             .+||+.+++.++..++.
T Consensus       269 ~g~~~p~~~~~isE~~p-~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~  347 (742)
T TIGR01299       269 IGGAIPIVFSYFAEFLA-QEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA  347 (742)
T ss_pred             HHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH
Confidence            99999999999999999 49999999999999999999999888776643             35899888887776665


Q ss_pred             HHHHHHhccCCCCC--------------------C-C----C-----------------------CCc------------
Q psy14075        164 GLLQLLLLQPGVVK--------------------Q-E----V-----------------------EPP------------  183 (414)
Q Consensus       164 ~~~~~~~~~~~~~~--------------------~-~----~-----------------------~~~------------  183 (414)
                      .+.. ++.||.++.                    . +    +                       +..            
T Consensus       348 ll~~-~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (742)
T TIGR01299       348 IGAL-TFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALS  426 (742)
T ss_pred             HHHH-HHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhh
Confidence            4443 444443210                    0 0    0                       000            


Q ss_pred             -------hhhhhccCh---HHHHHHHHHHHHHHHHHhhhhchHHHHHHH----h--------------------------
Q psy14075        184 -------TLKSLVMDP---YILIAAGAITFANTGIAMLEPSLPIWMMDT----M--------------------------  223 (414)
Q Consensus       184 -------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------------------------  223 (414)
                             +++++++.+   +.+.+++.+++..+.++++..|+|.++.+.    +                          
T Consensus       427 ~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (742)
T TIGR01299       427 EGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIH  506 (742)
T ss_pred             hhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhc
Confidence                   122233332   345667778888899999999999876441    0                          


Q ss_pred             -----------CC-----C----------------c--------------------------------------------
Q psy14075        224 -----------GA-----D----------------K--------------------------------------------  227 (414)
Q Consensus       224 -----------g~-----~----------------~--------------------------------------------  227 (414)
                                 |+     +                .                                            
T Consensus       507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~  586 (742)
T TIGR01299       507 RGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPID  586 (742)
T ss_pred             cccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCcc
Confidence                       00     0                0                                            


Q ss_pred             --------cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q psy14075        228 --------WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVD  299 (414)
Q Consensus       228 --------~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  299 (414)
                              ........+.+++.+++.++.++++||+|||+++..+.++.+++.+++.+.++...+++..++.+++.+...
T Consensus       587 ~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~  666 (742)
T TIGR01299       587 FDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAW  666 (742)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence                    001233456678889999999999999999999999999999988888877665555555556666655543


Q ss_pred             hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +   ....++.|.+|++.|++++|+.+....+|.+++|++.|.+.+. +....|++.+++.++++++.+++++
T Consensus       667 ~---~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPE  735 (742)
T TIGR01299       667 N---ALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPD  735 (742)
T ss_pred             H---HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3   3334578999999999999999999999999999999988874 4566777777777777666666654

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK11043 putative transporter; Provisional

Probab=100.00  E-value=9.6e-34  Score=267.79  Aligned_cols=333  Identities=18%  Similarity=0.190  Sum_probs=262.9

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|++.+++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++
T Consensus        28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~  107 (401)
T PRK11043         28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVG  107 (401)
T ss_pred             hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence            45778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+...+...+++.|++|+ +++++..+.......+|..++|.+++.+.+++|||+.|++.++..++..+..++..+++++
T Consensus       108 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (401)
T PRK11043        108 VCSAAVIWQALVIDRYPA-QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA  186 (401)
T ss_pred             hHHHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence            988888888999999994 8899999999999999999999999999999999999999988888776666555544332


Q ss_pred             CC-CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075        177 KQ-EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM  255 (414)
Q Consensus       177 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~  255 (414)
                      ++ ++++.++++.+|+|+++...+...+....+.....+.|.++++ .|+++.+.++......++.+++.++.+++.||+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~  265 (401)
T PRK11043        187 RKQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW  265 (401)
T ss_pred             cccchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            22 2233467788899988766555555555566677788988876 699999999888888889999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHh---hh--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHH
Q psy14075        256 GRYLAALLGLLIIGICLMMI---PL--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFC  330 (414)
Q Consensus       256 ~~~~~~~~~~~~~~i~~~~~---~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  330 (414)
                      ++|+.........+++.+.+   ..  .++.+.......+.+++.+...+...   +...+..| +.+|++.|+.+....
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~g~~~g~~~~~~~  341 (401)
T PRK11043        266 GGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVV---AQALRPFP-QATGKAAALQNTLQL  341 (401)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhCc-ccChHHHHHHHHHHH
Confidence            98887655554444433322   11  22333334445556666666544433   23344444 568999999999999


Q ss_pred             HHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075        331 LGFAIGPAMSGTLVNTIGFEWMLFI  355 (414)
Q Consensus       331 ~g~~ig~~~~g~l~~~~g~~~~~~~  355 (414)
                      .++..++.+.|.+.|.......+..
T Consensus       342 ~~~~~~~~~~g~l~~~~~~~~~~~~  366 (401)
T PRK11043        342 GLCFLASLLVSALISTPLLTTGSVM  366 (401)
T ss_pred             HHHHHHHHHHHHccCCChhHHHHHH
Confidence            9999999999999886554444433

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=100.00  E-value=2.3e-33  Score=263.18  Aligned_cols=348  Identities=16%  Similarity=0.186  Sum_probs=261.2

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      +..|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|+
T Consensus        12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~   91 (377)
T PRK11102         12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGL   91 (377)
T ss_pred             ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence            46788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...+..+|++
T Consensus        92 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (377)
T PRK11102         92 AAAAASVVINALMRDMFP-KEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL  170 (377)
T ss_pred             HHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            999999999999999999 4999999999999999999999999999999999999999998888777666665555543


Q ss_pred             CCCCCCC-------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075        176 VKQEVEP-------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF  248 (414)
Q Consensus       176 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~  248 (414)
                      +++++++       +++++.+++|+++...+...+.......+..+.|.++.+.+|.++.+.+.......++.+++.++.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~  250 (377)
T PRK11102        171 PKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIIN  250 (377)
T ss_pred             cccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222111       134467788888877776666666677777788888888889999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHhh---hhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhH
Q psy14075        249 GPLGHRMGRYLAALLGLLIIGICLMMIP---LAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAI  324 (414)
Q Consensus       249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~---~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  324 (414)
                      +++.||+++|+.+..+..+..+..+.+.   ..+ +.+.......+.+.+.+...   ........|..| +.+|++.++
T Consensus       251 g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~g~~~~~  326 (377)
T PRK11102        251 SRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMIS---SNAMAVILDEFP-HMAGTASSL  326 (377)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh---HHHHHHHhcccc-ccchHHHHH
Confidence            9999999999988887766544322222   112 22222223333333333222   222233445444 778999998


Q ss_pred             HHHHH-HHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075        325 GDVAF-CLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       325 ~~~~~-~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      .+... .+|..+++.+.+. .+ .++...+...+++.+++.+..++.
T Consensus       327 ~~~~~~~~g~~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~  371 (377)
T PRK11102        327 AGTLRFGIGAIVGALLSLA-PF-TSAWPMVWSMAFCSILSILFYLYA  371 (377)
T ss_pred             HHHHHHHHHHHHHHHHHhc-cC-CChHHHHHHHHHHHHHHHHHHHHh
Confidence            77654 3555566655432 22 223333333444444444444443

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=100.00  E-value=5.8e-34  Score=265.80  Aligned_cols=347  Identities=12%  Similarity=0.085  Sum_probs=265.1

Q ss_pred             hhhhh-hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHH
Q psy14075         19 ENRHK-YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-----RTYGVLFLARSL   92 (414)
Q Consensus        19 ~~~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l   92 (414)
                      +.+.+ ++|+|++|.+++.+++.+++.+++++.|+++||+|.|+++.++.++.++.+++.+++     ++++.+++.|++
T Consensus        58 ~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l  137 (462)
T PRK15034         58 VNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALL  137 (462)
T ss_pred             HHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHH
Confidence            44444 899999999999999999999999999999999999999999999999999999987     899999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-----h-------------hcCChhHHH
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-----Q-------------FVGKTAPFL  154 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-----~-------------~~gw~~~f~  154 (414)
                      .|++ +..++.....+++|+| +++||+++|+.....++|..+++++...+.     .             ..+||.+++
T Consensus       138 ~Gig-g~~f~~~~~~vs~wfp-~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~  215 (462)
T PRK15034        138 CGFA-GANFASSMGNISFFFP-KAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAW  215 (462)
T ss_pred             HHHH-HHhHHHHHHHHHHHCC-HhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHH
Confidence            9997 7788889999999999 599999999998777777776665554433     2             234778888


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh
Q psy14075        155 ILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF  234 (414)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  234 (414)
                      +..++.++..++.+++.+++++ ++.+.++.++.+|+|+.|..++..++.+..+.++..++|.|+++.+  +........
T Consensus       216 ~~~~~~iv~~i~~~~~~~~~~~-~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~  292 (462)
T PRK15034        216 IWVPLLAIATIAAWSGMNDIAS-SRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLA  292 (462)
T ss_pred             HHHHHHHHHHHHHHHhCCCccc-cccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHH
Confidence            8888888777777777555432 3334456778999999999999999999899989889999998855  332332233


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh-hhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075        235 LPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP-LAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGY  308 (414)
Q Consensus       235 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~-~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  308 (414)
                      .+..+...+.++++|+++||+|+++++.++.+.+.++..... ..+     +.+......+...++.|.......-.   
T Consensus       293 ~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~---  369 (462)
T PRK15034        293 FFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQM---  369 (462)
T ss_pred             HHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHh---
Confidence            445677888899999999999999999888877766643322 221     23333333333333334333222212   


Q ss_pred             hhhcccc---------------------cchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHH
Q psy14075        309 LVDIRHT---------------------AVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       309 ~~~~~~~---------------------~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~  366 (414)
                      +...+|+                     ++.|.+.|+......+|+++-|.+.|...+.+| +...|+...+..+++.++
T Consensus       370 ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~  449 (462)
T PRK15034        370 IAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLL  449 (462)
T ss_pred             hHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence            2222221                     256899999999999999999999999999877 888898888888888877


Q ss_pred             HHHhcCC
Q psy14075        367 LYLLRNP  373 (414)
Q Consensus       367 ~~~~~~~  373 (414)
                      .+....+
T Consensus       450 ~w~~y~r  456 (462)
T PRK15034        450 TWLVYGR  456 (462)
T ss_pred             HHHHhcc
Confidence            7665443

>PRK15075 citrate-proton symporter; Provisional

Probab=100.00  E-value=2.8e-34  Score=273.78  Aligned_cols=330  Identities=17%  Similarity=0.167  Sum_probs=235.4

Q ss_pred             ccchhhhhhhcCCcchHHHHH-HHH-----HHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH-----
Q psy14075         16 VARENRHKYLMGETKAVGVMF-GSK-----AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG-----   84 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~-s~~-----~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~-----   84 (414)
                      ...|.+.+|++.++.+.+.+. +..     .+...+++++.|+++||+||||.++.+.+++.+++++++++++++     
T Consensus        36 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~  115 (434)
T PRK15075         36 FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLA  115 (434)
T ss_pred             HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            456888999999888765543 322     222347889999999999999999999999999999999999987     


Q ss_pred             ---HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHH
Q psy14075         85 ---VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPF  153 (414)
Q Consensus        85 ---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f  153 (414)
                         .+++.|+++|++.+...+....+++|++|+ ++|++++++.....++|..+++.+++.+.        +.+|||++|
T Consensus       116 ~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f  194 (434)
T PRK15075        116 APLLVLLGRLLQGFSAGVELGGVSVYLAEIATP-GRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPF  194 (434)
T ss_pred             HHHHHHHHHHHhhccccccHHHHHHHHHhhCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHH
Confidence               468999999999999999889999999995 99999999999998888888888877663        467999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCC-CCCCC----chhhhhccChHHHHH-HHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        154 LILSALALGDGLLQLLLLQPGVVK-QEVEP----PTLKSLVMDPYILIA-AGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      ++..+...+ ........||+++. +++++    ..+++..++++.+.. ....++....+.....+.|.|+++.+|++.
T Consensus       195 ~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~  273 (434)
T PRK15075        195 LIGCLIVPF-IFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSA  273 (434)
T ss_pred             HHHHHHHHH-HHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            876543322 22222222222110 01111    113333455554433 333334455666788899999998889999


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH-Hhh-h--hhhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM-MIP-L--ARNINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~-~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      .+.++......++.+++.++.|+++||++||+....+..+..+... .+. .  .++.........+.+++.+...+...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  353 (434)
T PRK15075        274 ADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMV  353 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHH
Confidence            8888888888999999999999999999999887766544432211 111 1  12222222333444555555433333


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHHHH-HHHhHHHHHHHHHHhhhchH
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVAFC-LGFAIGPAMSGTLVNTIGFE  350 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~ig~~~~g~l~~~~g~~  350 (414)
                         ....|..|++.|+++.|+.+.... +++.++|.+.|++.|..|+.
T Consensus       354 ---~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~  398 (434)
T PRK15075        354 ---VALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK  398 (434)
T ss_pred             ---HHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence               346788899999999999655554 45888999999999998853

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=100.00  E-value=5.6e-34  Score=264.27  Aligned_cols=330  Identities=28%  Similarity=0.456  Sum_probs=297.5

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ...|.+.+++|.++.+.+++.+...++..+++++.|+++||+|||+.+..+.++..++.++..+.++++.+++.|++.|+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~   99 (352)
T cd06174          20 PALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGL   99 (352)
T ss_pred             hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence            34577889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++| +|+|++.+++.+...++|..++|.+++.+.+..+||+.|++.++..++..+...+..    
T Consensus       100 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  174 (352)
T cd06174         100 GGGALYPAAAALIAEWFP-PKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL----  174 (352)
T ss_pred             ccccccHhHHHHHHHhCC-ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----
Confidence            999999999999999999 499999999999999999999999999999999999999999988887776665553    


Q ss_pred             CCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075        176 VKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM  255 (414)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~  255 (414)
                                      |+++...+..++..........+.|.+.++.+|.+..+.+.......++..++.++.+++.||+
T Consensus       175 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  238 (352)
T cd06174         175 ----------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL  238 (352)
T ss_pred             ----------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                            6777788888888888889999999999987799999999999999999999999999999999


Q ss_pred             hhHH-HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075        256 GRYL-AALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA  334 (414)
Q Consensus       256 ~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~  334 (414)
                      ++|+ .+..+..+..++.+.+...++.+......++.+++.+...+....   ...|..|+++|++.+|+.+...+++..
T Consensus       239 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (352)
T cd06174         239 GRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLT---LASELAPPEARGTASGLFNTFGSLGGA  315 (352)
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHH---HHHhhcCHHHHHHHHHHHHHHHHHHHH
Confidence            9999 898999999998888888777777777888888888877654443   466777889999999999999999999


Q ss_pred             HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy14075        335 IGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL  369 (414)
Q Consensus       335 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  369 (414)
                      ++|.+.|.+.|..+++..+.+.+++.+++.+..+.
T Consensus       316 i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~  350 (352)
T cd06174         316 LGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL  350 (352)
T ss_pred             HHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence            99999999999999999999998888887766543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK10133 L-fucose transporter; Provisional

Probab=100.00  E-value=1.3e-33  Score=268.32  Aligned_cols=343  Identities=13%  Similarity=0.062  Sum_probs=263.3

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFGRTYGVLFLARSLQ   93 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~   93 (414)
                      ..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+||||++..+.++++++.+++   .++++++.++++|+++
T Consensus        48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~  127 (438)
T PRK10133         48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFII  127 (438)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999999999999999999999999885   4688999999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh------------------h--------c
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ------------------F--------V  147 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~------------------~--------~  147 (414)
                      |+|.+...+...+++.|+.| +++|.+.++..+..+.+|..+++.+++.+..                  .        .
T Consensus       128 G~g~g~~~~~~~~~v~~~~~-~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~  206 (438)
T PRK10133        128 AAGLGCLETAANPFVTVLGP-ESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVL  206 (438)
T ss_pred             HHHHHHHHhhHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHH
Confidence            99999999999999999876 4777778999999999999999998875441                  0        2


Q ss_pred             CChhHHHHHHH-HHHHHHHHHHHhccCCCCCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHH-
Q psy14075        148 GKTAPFLILSA-LALGDGLLQLLLLQPGVVKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWM-  219 (414)
Q Consensus       148 gw~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  219 (414)
                      +||++|+.... ..++..+......|+.+++++++      .++.++++|+|.++...+..++..........|.+.|+ 
T Consensus       207 ~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~  286 (438)
T PRK10133        207 SVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV  286 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56767764443 33333333232223322111111      12346788999888776666777777777777888885 


Q ss_pred             HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q psy14075        220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVD  299 (414)
Q Consensus       220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  299 (414)
                      ++.+|.++.++++.+....++.++++++.+++.||+++|+.+..+..+..+++++..+.++.. ......+.|++.+..+
T Consensus       287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~  365 (438)
T PRK10133        287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY  365 (438)
T ss_pred             hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999988888777666655554444432 2445667888888887


Q ss_pred             hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHH
Q psy14075        300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~  366 (414)
                      |...+.   ..+..|++ .+.+.++.. ...+|+.++|++.|.+.|..| .+..|++...+.+.....
T Consensus       366 P~~~s~---a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~  428 (438)
T PRK10133        366 PTIFSL---GIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF  428 (438)
T ss_pred             HHHHHH---HHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence            766654   44544443 467777765 455789999999999999988 788887665555544443

>PRK09952 shikimate transporter; Provisional

Probab=100.00  E-value=2.4e-33  Score=267.25  Aligned_cols=346  Identities=14%  Similarity=0.100  Sum_probs=250.8

Q ss_pred             hhhhh--cCCcchHHHHH-----HHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH--------H
Q psy14075         21 RHKYL--MGETKAVGVMF-----GSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG--------V   85 (414)
Q Consensus        21 ~~~~~--g~s~~~~g~~~-----s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~   85 (414)
                      +.+++  +.++. .+++.     ++..++..+++++.|+++||+|||+++..+.+++++++++++++++++        .
T Consensus        49 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (438)
T PRK09952         49 FNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVL  127 (438)
T ss_pred             HHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence            34444  56665 45553     345567789999999999999999999999999999999999999987        5


Q ss_pred             HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh--------hcCChhHHHHHH
Q psy14075         86 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ--------FVGKTAPFLILS  157 (414)
Q Consensus        86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~--------~~gw~~~f~~~~  157 (414)
                      +++.|+++|++.|..++...+++.|++|+ |+|++..+..+.+..+|..+++.+...+..        .+|||++|++.+
T Consensus       128 l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~  206 (438)
T PRK09952        128 LVTLRAIQGFAVGGEWGGAALLAVESAPK-NKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSI  206 (438)
T ss_pred             HHHHHHHHHhhhcccHHHHHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHH
Confidence            88999999999999999999999999995 999999999999999999999887766653        479999999888


Q ss_pred             HHHHHHHHHHHHhccCCCCC--C--C--C--CCch-hhhhccChHHHHHHH-HHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        158 ALALGDGLLQLLLLQPGVVK--Q--E--V--EPPT-LKSLVMDPYILIAAG-AITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~--~--~--~--~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      ++.++... .....||+++.  +  +  +  ++.+ .+.++|+|+.+.... ..++.....+....+.|.|+++.+|.+.
T Consensus       207 ~~~l~~~~-l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~  285 (438)
T PRK09952        207 VLVLIALW-VRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPR  285 (438)
T ss_pred             HHHHHHHH-HHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            77654332 22233333211  0  0  0  1111 223567777665543 3444556667778899999988888887


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh---hh-hhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL---AR-NINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~---~~-~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      ..........++..+++.++.|+++||++||+.+..+.++..++.+.+..   .. +.+......++.+++.+...+...
T Consensus       286 ~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  365 (438)
T PRK09952        286 ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQ  365 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66555555667777888899999999999999888776665554332222   11 222223334444566555544433


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHH-HHHHHhHHHHHHHHHHhhh--chHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVA-FCLGFAIGPAMSGTLVNTI--GFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                         ....|.+|.+.|+++.|+.+.. ..+++.++|.+.+++.|..  +|...+.+.+++.+++.+..+..++
T Consensus       366 ---~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~  434 (438)
T PRK09952        366 ---PMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD  434 (438)
T ss_pred             ---HHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence               3466888999999999986555 4589999999999999855  3777888777777777777665543

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=100.00  E-value=4.9e-35  Score=274.35  Aligned_cols=335  Identities=16%  Similarity=0.119  Sum_probs=263.7

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      ....|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   94 (379)
T TIGR00881        15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNG   94 (379)
T ss_pred             hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            34567788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhch-hhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGP-PFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~-~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      ++.+...+...+++.|++| +++|++++++.+.+..+|..++| .+++.+.+..+||+.|++.+++.++..+..++..++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (379)
T TIGR00881        95 IFQGMGWPPCGRTVTKWFS-RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRD  173 (379)
T ss_pred             hhccccCCchHHHHHHhcC-HhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCC
Confidence            9999999999999999999 49999999999999999999999 577777778899999999988887766666655544


Q ss_pred             CCCCCC----------C--------------CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc
Q psy14075        174 GVVKQE----------V--------------EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ  229 (414)
Q Consensus       174 ~~~~~~----------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  229 (414)
                      ++++++          +              .+...++++|+|.++...+..++..........+.|.|+++.+|.++.+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  253 (379)
T TIGR00881       174 SPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK  253 (379)
T ss_pred             CccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence            321100          0              0012345678888888888888888888888899999999889999999


Q ss_pred             hhhHhHHHHHHHHhhhhhhhhhhhhhh-hHHHHH-H-HHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075        230 QGVSFLPASISYLIGTNLFGPLGHRMG-RYLAAL-L-GLLIIGICLMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMMP  304 (414)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~-~~~~~~-~-~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~  304 (414)
                      .+.......++.++++++.+++.||.. +|+... . ......++......  ..+........++.|+......   ..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~  330 (379)
T TIGR00881       254 ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQ---ML  330 (379)
T ss_pred             HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhh---HH
Confidence            999999999999999999999999863 333222 1 22222222222222  1222333333344444332221   12


Q ss_pred             hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075        305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML  353 (414)
Q Consensus       305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~  353 (414)
                      ......|..|++.|+++.|+.+....+|+.++|.+.|.+.|..||+..|
T Consensus       331 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f  379 (379)
T TIGR00881       331 IGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF  379 (379)
T ss_pred             HHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence            2234668888999999999999999999999999999999999987653

>TIGR00896 CynX cyanate transporter

Probab=100.00  E-value=1e-33  Score=263.21  Aligned_cols=326  Identities=16%  Similarity=0.100  Sum_probs=259.0

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      .+.+|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+||||++.++.++..++.+.+ .+++++.+++.|++.|
T Consensus        20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g   98 (355)
T TIGR00896        20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIG   98 (355)
T ss_pred             cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999999999999988888887 7889999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--CChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      ++.+...+....++.|++|  ++|++++++.+...++|..+++.+++.+.++.  +||+.|...++..++.........+
T Consensus        99 ~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~  176 (355)
T TIGR00896        99 VGIAIINVLLPSLIKRDFP--QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWIPQVR  176 (355)
T ss_pred             HHHHHHhccchHHHHHhCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999988888888999885  58999999999999999999999999888765  3999988777655443322211111


Q ss_pred             CCCCCCC-CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhh
Q psy14075        173 PGVVKQE-VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL  251 (414)
Q Consensus       173 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l  251 (414)
                      +++++++ .++.+.++.+|+|.++...+..++....+.....++|.|+++ .|.+..+.+...+...++.++++++.|++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l  255 (355)
T TIGR00896       177 RRVAANQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPAL  255 (355)
T ss_pred             cccCCCCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            1111111 122346678899998877776677677777888899999987 69999999999999999999999999999


Q ss_pred             hhhh-hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh-cccccchhhHHhHHHHHH
Q psy14075        252 GHRM-GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD-IRHTAVYGSVYAIGDVAF  329 (414)
Q Consensus       252 ~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~  329 (414)
                      .||+ +||+.+..+..+.+++.+.+.+.++.... ...++.|++.+...+...+.   ..+ ..++++++...++.+...
T Consensus       256 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~  331 (355)
T TIGR00896       256 ARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTL---IGLRSRQAAQAAALSAMAQSIG  331 (355)
T ss_pred             HhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHH---HHHhccCHHHHHHHHHHHHHHH
Confidence            9999 46666667777777776666554433322 24566788877765544333   323 233566788999999999


Q ss_pred             HHHHhHHHHHHHHHHhhhc
Q psy14075        330 CLGFAIGPAMSGTLVNTIG  348 (414)
Q Consensus       330 ~~g~~ig~~~~g~l~~~~g  348 (414)
                      +++..++|.+.|++.|+.|
T Consensus       332 ~~~~~~gp~~~G~l~~~~g  350 (355)
T TIGR00896       332 YLLAALGPLFVGVLHDISG  350 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999887

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>KOG2532|consensus

Probab=100.00  E-value=1.9e-34  Score=270.92  Aligned_cols=345  Identities=20%  Similarity=0.232  Sum_probs=287.5

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhh
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSC   99 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~   99 (414)
                      ..++++|..|-+++.+.++.|+.+++++.|+++||+|.|+++..+.++.++++++..++.  +++.+++.|++||++.|.
T Consensus        65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~  144 (466)
T KOG2532|consen   65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV  144 (466)
T ss_pred             CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence            568999999999999999999999999999999999999999999999999999998875  456889999999999999


Q ss_pred             hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy14075        100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLLQLLLLQPGVVKQ  178 (414)
Q Consensus       100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  178 (414)
                      .+|+...+.++|.|+ +||++..++...+..+|.+++-+++|.+.+. +||+.+|++.++++++..++.+.+..|++.++
T Consensus       145 ~~pa~~~i~~~W~P~-~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h  223 (466)
T KOG2532|consen  145 LFPAIGSILAKWAPP-NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH  223 (466)
T ss_pred             HHhhhhceeeeECCH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence            999999999999996 9999999999999999999999999999998 99999999999999999888887776554332


Q ss_pred             C-------------------C--CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHH
Q psy14075        179 E-------------------V--EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPA  237 (414)
Q Consensus       179 ~-------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  237 (414)
                      +                   +  .+.+++++++++.+|...+..++.+.++..+..++|.|+++++|++..+.|++.++.
T Consensus       224 ~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP  303 (466)
T KOG2532|consen  224 PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP  303 (466)
T ss_pred             CCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence            1                   1  234789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhhhhhhhhhh---------HHHHHHHHHHHHHHHHHhhhhhhhHH-HHHHHHHHHHHH-Hhhhhhhhhhh
Q psy14075        238 SISYLIGTNLFGPLGHRMGR---------YLAALLGLLIIGICLMMIPLARNINH-LIVPNAGLGFAI-GMVDSSMMPEL  306 (414)
Q Consensus       238 ~~~~~~~~~~~g~l~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~g~~~-~~~~~~~~~~~  306 (414)
                      .+...+..++.|.++||..+         |..-.++....+++++.+.+.++... ..+.++....+. |...+....  
T Consensus       304 ~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~--  381 (466)
T KOG2532|consen  304 FLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYK--  381 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHh--
Confidence            99999999999999998754         33445667777777777777653222 222222222222 222121221  


Q ss_pred             hhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh---hhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        307 GYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN---TIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       307 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                       ...+. .++..+..+|+.+....+.+.++|.+.|.+..   ...|+.+|.+.+++.+++.++..++-
T Consensus       382 -~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~  447 (466)
T KOG2532|consen  382 -NHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG  447 (466)
T ss_pred             -hhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence             12222 35566999999999999999999999999983   34699999999999888886665554

>PRK10054 putative transporter; Provisional

Probab=100.00  E-value=1.1e-33  Score=265.92  Aligned_cols=343  Identities=13%  Similarity=0.065  Sum_probs=269.8

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSS   98 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~   98 (414)
                      +.+.+++|.|+.++|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.++.+++++++.+++.|.+.|.+.+
T Consensus        32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  111 (395)
T PRK10054         32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS  111 (395)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             hhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC-CC
Q psy14075         99 CSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV-VK  177 (414)
Q Consensus        99 ~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~  177 (414)
                      ...+...++..|.+|+ ++|++++++.....++|..++|++++.+.+ .+|+.+|++.++..++..+...+..++++ ++
T Consensus       112 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~  189 (395)
T PRK10054        112 VFSTVLKAWFADNLSS-TSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAI  189 (395)
T ss_pred             HHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            8888889999999994 899999999999999999999999998885 79999999988887776555554443322 21


Q ss_pred             CCC--CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhh
Q psy14075        178 QEV--EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGH  253 (414)
Q Consensus       178 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d  253 (414)
                      +++  +..+.++.+|||+++...+..++..........+.+.|..+.  .+.+....+.......+.........+++.|
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~  269 (395)
T PRK10054        190 ATETGSVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLN  269 (395)
T ss_pred             ccchhhhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHc
Confidence            111  112336778899888777777776666666666777776543  3455556677777777777777788899999


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHH
Q psy14075        254 RMGRYLAALLGLLIIGICLMMIPLA-RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLG  332 (414)
Q Consensus       254 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g  332 (414)
                      |.++|+.+..+..+..++.+.+... ++.+.+.+...+.+++.+...+...   +...+..|++.+++.++..+ ...+|
T Consensus       270 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~---~~~~~~~p~~~~~~~~~~~~-~~~~G  345 (395)
T PRK10054        270 AANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEY---MLIDHIAPPGMKASYFSAQS-LGWLG  345 (395)
T ss_pred             cCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHH---HHHHHhCCcccceehHhHHH-HHHHH
Confidence            9999998888888888777666553 4555555667777777766544333   33556677888899888654 66789


Q ss_pred             HhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy14075        333 FAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL  367 (414)
Q Consensus       333 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  367 (414)
                      ..+||.++|.+.|+.|+...|.+.+.+..+..++.
T Consensus       346 ~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~  380 (395)
T PRK10054        346 AAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM  380 (395)
T ss_pred             HHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999888877665555544433

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=100.00  E-value=2.8e-33  Score=262.45  Aligned_cols=338  Identities=14%  Similarity=0.043  Sum_probs=274.6

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhH----HHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPM----FTGFVIMFLSTLIFAFGRTYGVLFLARSL   92 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l   92 (414)
                      .+|.+.+++|.|.+++|++.+.+.+...++++++|+++||+|||+..    ..+..++.+  ..+..+++++.+++.|++
T Consensus        26 ~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l  103 (382)
T TIGR00902        26 FFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGL  103 (382)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHH
Confidence            35788899999999999999999999999999999999999985433    222222222  244467899999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      +|.+.+...|...++..++   +++|++.+|......++|.+++|++++.+.+++|||..|++......+ .+......|
T Consensus       104 ~~~~~~~~~p~~~al~~~~---~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~~~~  179 (382)
T TIGR00902       104 FALFFSAGMPIGDALANTW---QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAF-MLIGFLIKP  179 (382)
T ss_pred             HHHHHccchhHHHHHHHHH---HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH-HHHHHHcCC
Confidence            9999988889888887654   368999999999999999999999999999999999999887765333 233333333


Q ss_pred             CC-CCCCC-----CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075        173 PG-VVKQE-----VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN  246 (414)
Q Consensus       173 ~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~  246 (414)
                      +. +++++     ++.++.++++|+|+++...+..++..........+.|.|+++ .|.++.+.|.......++.+++..
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~  258 (382)
T TIGR00902       180 TIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFA  258 (382)
T ss_pred             CCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHH
Confidence            21 21111     112346788999999998888888888888889999999987 799999999999999999999999


Q ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHH
Q psy14075        247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGD  326 (414)
Q Consensus       247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  326 (414)
                      +.+++.||+++|+.+.++.+...+....+.+.++.+.++...++.|+..+...+..   ..++.+. |++++++..++++
T Consensus       259 ~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~---~~~i~~~-~~~~~~~~q~~~~  334 (382)
T TIGR00902       259 FSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAA---MRYIAAQ-PGSEIAKLQALYN  334 (382)
T ss_pred             HhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH---HHHHHhC-CHhhHHHHHHHHH
Confidence            99999999999999999999999999888888888888888999999999886553   3445555 7888899999976


Q ss_pred             -HHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075        327 -VAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       327 -~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  366 (414)
                       ....+|..++|.+.|++.|++|+ ..|...+.+.+++.++
T Consensus       335 ~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       335 ALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence             45679999999999999999986 6677777777665444

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=100.00  E-value=8.6e-35  Score=270.05  Aligned_cols=317  Identities=27%  Similarity=0.422  Sum_probs=256.4

Q ss_pred             cch-hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         17 ARE-NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        17 ~~~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      ..| .+.+++|.|+.+++++.+.+.++..+++++.|+++||+||||++..+.++.+++.++..++++++.+++.|++.|+
T Consensus        18 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~   97 (352)
T PF07690_consen   18 ALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGI   97 (352)
T ss_dssp             HHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccc
Confidence            346 7889999999999999999999999999999999999999999999999999997777777888899999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+...+++.|++|+ ++|++++++.+...++|..++|.+++.+.++.+||+.|++.+++.++..++...+.++++
T Consensus        98 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~  176 (352)
T PF07690_consen   98 GSGFFSPASNALIADWFPP-EERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP  176 (352)
T ss_dssp             HHHHHHHHHHHHHHHCCCT-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred             ccccccccccccccccchh-hhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence            9999999999999999994 999999999999999999999999999998899999999999999888775333332222


Q ss_pred             --CCCCCCCc----------h-hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCC-ccchhhHhHHHHHHH
Q psy14075        176 --VKQEVEPP----------T-LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGAD-KWQQGVSFLPASISY  241 (414)
Q Consensus       176 --~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~g~~~~~~~~~~  241 (414)
                        ++++++.+          + ++.++++|.+|......++..........+.|.|+++.+|.+ ..+.+.......+..
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  256 (352)
T PF07690_consen  177 PPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVG  256 (352)
T ss_dssp             TTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHH
Confidence              11111111          1 455666666664555555555677778899999978889999 788999999999999


Q ss_pred             HhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh---hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075        242 LIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA---RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY  318 (414)
Q Consensus       242 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (414)
                      +++.++.+++.||+++++..........+..+.+...   ++........++.|++.+...+...   ....+..|++++
T Consensus       257 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~  333 (352)
T PF07690_consen  257 IIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILF---SLIQELVPPEYR  333 (352)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHH---HHHHCCCHTCHH
T ss_pred             HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCHHHH
Confidence            9999999999999998776666666665555544433   2345555667778888777755444   346688888999


Q ss_pred             hhHHhHHHHHHHHHHhHHH
Q psy14075        319 GSVYAIGDVAFCLGFAIGP  337 (414)
Q Consensus       319 g~~~g~~~~~~~~g~~ig~  337 (414)
                      |++.|+.+...++|..++|
T Consensus       334 g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  334 GTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCC
Confidence            9999999999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.7e-34  Score=255.66  Aligned_cols=348  Identities=17%  Similarity=0.155  Sum_probs=293.3

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhH---HHHHHHHHHHhh
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY---GVLFLARSLQGI   95 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~l~~~r~l~G~   95 (414)
                      +.+.+|+|+|+.|.+++.+...+...+..++.|.+.||+|.|++..++.++..+-.+..+++.++   |++++.+++.|+
T Consensus        38 ~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~  117 (417)
T COG2223          38 VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL  117 (417)
T ss_pred             hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhc
Confidence            56679999999999999999999999999999999999999999999999999999999987654   599999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC---ChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG---KTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g---w~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      +.+ .+....+.+++|+|+ |++|.++|+.. ..|+|..+...++..+....+   ||....+..+..++..+..++..+
T Consensus       118 ~Ga-sFav~m~~~s~~fP~-~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~  194 (417)
T COG2223         118 AGA-SFAVGMPNASFFFPK-EKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN  194 (417)
T ss_pred             ccc-eehcccccccccCCh-hhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            755 556678999999995 99999999999 999999999999999998888   999999999998888888888887


Q ss_pred             CCCCCCCC---CC-chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075        173 PGVVKQEV---EP-PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF  248 (414)
Q Consensus       173 ~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~  248 (414)
                      +.++.++.   .. .+.+.++++|+.|.+.+.++..+.++.++..++|.|+++++|.++.++|.......+.+.+.++++
T Consensus       195 d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~G  274 (417)
T COG2223         195 DVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLG  274 (417)
T ss_pred             CChhhhccccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhcc
Confidence            76553221   12 346678899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhH
Q psy14075        249 GPLGHRMGRYLAALLGLLIIGICLMMIPLAR-------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV  321 (414)
Q Consensus       249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  321 (414)
                      |+++||+|.+|.+...+..++++........       +........+..++..|.......   ..+...+| ++.|.+
T Consensus       275 G~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvf---k~Ip~if~-~~~G~v  350 (417)
T COG2223         275 GWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVF---KMIPVIFP-KETGAV  350 (417)
T ss_pred             chhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchhe---eechHHHH-hhhhHH
Confidence            9999999999999888888888776665542       233334444445555555533323   22334443 456999


Q ss_pred             HhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        322 YAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       322 ~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      .|+....+.+|+..-|...|...+.+| +..+|++...+.+++.++.+..+.+
T Consensus       351 ~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r  403 (417)
T COG2223         351 TGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR  403 (417)
T ss_pred             HHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999 9999999988888888777665543

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=100.00  E-value=9.2e-34  Score=274.30  Aligned_cols=343  Identities=16%  Similarity=0.081  Sum_probs=246.8

Q ss_pred             hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHH
Q psy14075         25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG------------RTYGVLFLARSL   92 (414)
Q Consensus        25 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l   92 (414)
                      ++.++.+.+++.+.+.++..++++++|+++||+||||+++++.+++.++.++++++            ++++.+++.|++
T Consensus        50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l  129 (479)
T PRK10077         50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII  129 (479)
T ss_pred             ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence            38899999999999999999999999999999999999999999999998888763            235778899999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHHHHHHHHHHHH
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFLILSALALGDG  164 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~~~~~~~~~~~  164 (414)
                      +|++.|...+...++++|++|+ ++|++++++.+.+..+|..+++.++..+.        +..|||+.|++.++..++..
T Consensus       130 ~G~~~g~~~~~~~~~i~e~~~~-~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~  208 (479)
T PRK10077        130 GGIGVGLASMLSPMYIAEIAPA-HIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL  208 (479)
T ss_pred             HhhhHhHHhhHHHHHHHhhCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence            9999999999999999999995 99999999999999999999987766543        35689999999888887765


Q ss_pred             HHHHHhccCCCCC----CCCCC------------------chhhhhcc-----ChHHHHH-----H----HHHHHHHHHH
Q psy14075        165 LLQLLLLQPGVVK----QEVEP------------------PTLKSLVM-----DPYILIA-----A----GAITFANTGI  208 (414)
Q Consensus       165 ~~~~~~~~~~~~~----~~~~~------------------~~~~~~~~-----~~~~~~~-----~----~~~~~~~~~~  208 (414)
                      +..+ +.||+++.    ++.++                  .+.++..+     .+..+..     .    ...+......
T Consensus       209 ~~~~-~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (479)
T PRK10077        209 MLLY-FVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGI  287 (479)
T ss_pred             HHHH-cCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhCh
Confidence            5544 44554321    00000                  00111111     0111100     0    0011111122


Q ss_pred             HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhH--HH
Q psy14075        209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NIN--HL  284 (414)
Q Consensus       209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~--~~  284 (414)
                      .....+.|.+.++ .|.+.....+.....++..+++.++.++++||++||+.+..+..+.+++.+.+....  +..  ..
T Consensus       288 ~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~  366 (479)
T PRK10077        288 NVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA  366 (479)
T ss_pred             hHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence            2334455766555 688877777777788889999999999999999999999999998888876665432  111  12


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH------hhhchHHHHHHHHH
Q psy14075        285 IVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV------NTIGFEWMLFIIAI  358 (414)
Q Consensus       285 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~------~~~g~~~~~~~~~~  358 (414)
                      ....++.+.+.+....  +.......|.+|++.|+++.|+.+...+++..+++.+.+.+.      |..++...|++.++
T Consensus       367 ~~~~~~~~~~~~~~~~--~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  444 (479)
T PRK10077        367 LLSMLFYVAAFAMSWG--PVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGC  444 (479)
T ss_pred             HHHHHHHHHHHhcccc--chhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHH
Confidence            2233344444433221  222345678889999999999999999999999987776544      56778888888777


Q ss_pred             HHHHHHHHHHHhcC
Q psy14075        359 LDFMYAPLLYLLRN  372 (414)
Q Consensus       359 ~~~~~~~~~~~~~~  372 (414)
                      ..+++.++.+.+.+
T Consensus       445 ~~~~~~~~~~~~~~  458 (479)
T PRK10077        445 MGVLAALFMWKFVP  458 (479)
T ss_pred             HHHHHHHHHHhccc
Confidence            76766665554443

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=100.00  E-value=1.1e-33  Score=269.92  Aligned_cols=351  Identities=13%  Similarity=0.080  Sum_probs=263.1

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHH
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG----RTYGVLFLARSLQ   93 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~   93 (414)
                      .|.+++ +|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++.++.    ++++.+.+.|++.
T Consensus        50 ~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  128 (438)
T TIGR00712        50 MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLN  128 (438)
T ss_pred             hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence            455554 69999999999999999999999999999999999999999999999998887764    5678888999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-hhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-QFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      |++.+..++.....+.|++|+ ++|++++++.+...++|..+++.+.+... ++.+||..|++.+++.++..+..+++.+
T Consensus       129 g~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~  207 (438)
T TIGR00712       129 GWFQGMGWPPCGRTMVHWWSQ-SERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR  207 (438)
T ss_pred             HHHhhcchHHHHHHHHHhcCc-ccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999988888999999995 99999999999999999999988877644 4579999999999988887666666555


Q ss_pred             CCCCCC---------C--------CCCc--hh-----hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc
Q psy14075        173 PGVVKQ---------E--------VEPP--TL-----KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW  228 (414)
Q Consensus       173 ~~~~~~---------~--------~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  228 (414)
                      |++++.         +        +++.  +.     +..+|++.++...+..++.......+..+.|.|+++..|+++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~  287 (438)
T TIGR00712       208 DTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALD  287 (438)
T ss_pred             CCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChh
Confidence            432210         0        0000  11     1367888888887777777777778888999999998899999


Q ss_pred             chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH---HHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII---GICLMMIPLA--RNINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~---~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      ++++......+.++++.++.|++.||+++++....+....   .++.+.+...  .+.+......+..|++  ...+. .
T Consensus       288 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~-~  364 (438)
T TIGR00712       288 KSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFL--IYGPV-M  364 (438)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH--HccHH-H
Confidence            9999999999999999999999999995432212222211   1222222221  1222222222333332  22111 1


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHHHHHHH-hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGF-AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      .......+..|++.||++.|+.+...++|+ .++|.+.|.+.|+.||+.++.+..++.+++.+..+.+.++
T Consensus       365 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  435 (438)
T TIGR00712       365 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG  435 (438)
T ss_pred             HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence            111235578888899999999998888875 6899999999999999999988888777777666655443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=100.00  E-value=1.8e-32  Score=261.97  Aligned_cols=351  Identities=20%  Similarity=0.229  Sum_probs=289.9

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-----GRTYGVLFLARS   91 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~   91 (414)
                      +.+.+..+..-|+..++++.++..+...+.++++|.++||++|||+++.+.++.++..+..++     ..+.|.+++.-+
T Consensus        32 a~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~f  111 (524)
T PF05977_consen   32 ALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTF  111 (524)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence            456667778889999999999999999999999999999999999999999887766555443     247889999999


Q ss_pred             HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075         92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus        92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      +.|++.+...|+.++++.|..| +++..+++++.+...++..++||.++|.+...+|-.+.|.+.++..++.........
T Consensus       112 l~g~~~a~~~PA~~A~ip~lV~-~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~  190 (524)
T PF05977_consen  112 LLGIGSAFFNPAWQAIIPELVP-KEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWK  190 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc-HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            9999999999999999999999 599999999999999999999999999999999999999999988777655555444


Q ss_pred             cCCCCCCCCCC-------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhh
Q psy14075        172 QPGVVKQEVEP-------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIG  244 (414)
Q Consensus       172 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~  244 (414)
                      ++.++++.+++       ..++-+.++|.+.......++.++....+...+|.+.++.+|.++...|++.+..+++.++|
T Consensus       191 ~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~G  270 (524)
T PF05977_consen  191 PPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILG  270 (524)
T ss_pred             ccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence            43322221111       12333455676665555555555555666778999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhH
Q psy14075        245 TNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAI  324 (414)
Q Consensus       245 ~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  324 (414)
                      .++.+++.+|+++++++..+.++.+++++.+.+.++.+...+..++.|++.........+   ......|++.||+++++
T Consensus       271 al~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t---~~Q~~~P~~~~GRv~si  347 (524)
T PF05977_consen  271 ALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNT---LVQLSVPDWVRGRVFSI  347 (524)
T ss_pred             HHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCCHHHHhHHHHH
Confidence            999999999999988888899999998888899888888777888888887776544443   35577789999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        325 GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       325 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      +++....+..+|..+.|.+.|.+|.+.++.+.++..+++.++....+
T Consensus       348 ~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~  394 (524)
T PF05977_consen  348 YQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFP  394 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999998887777666666655443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR00898 2A0119 cation transport protein

Probab=100.00  E-value=2.8e-33  Score=272.53  Aligned_cols=343  Identities=16%  Similarity=0.091  Sum_probs=262.9

Q ss_pred             cchhhhhhhcCC---cchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075         17 ARENRHKYLMGE---TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ   93 (414)
Q Consensus        17 ~~~~~~~~~g~s---~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~   93 (414)
                      ..|.+.+|++++   +.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++++++|++.+++.|++.
T Consensus       111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~  190 (505)
T TIGR00898       111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV  190 (505)
T ss_pred             ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence            457788999999   89999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      |++.+...+...+++.|++|+ ++|+++.++...+..+|.++++.++..+.+   ||+.|++.++..++..+..++ .||
T Consensus       191 G~~~~~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~-~~e  265 (505)
T TIGR00898       191 GMGIGGIWVQAVVLNTEFLPK-KQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWF-VPE  265 (505)
T ss_pred             HhhccchHHHHHHHhheecCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            999999999999999999994 999999999999999999999998876654   999999999888777666544 443


Q ss_pred             CCCC-----------------------------------C----CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhc
Q psy14075        174 GVVK-----------------------------------Q----EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPS  214 (414)
Q Consensus       174 ~~~~-----------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (414)
                      +++.                                   +    ++++.++++++|+|+++...+...+.++........
T Consensus       266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (505)
T TIGR00898       266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG  345 (505)
T ss_pred             ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            2210                                   0    001124567888888776655554444433333223


Q ss_pred             hHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh--HHHHHHHHHHH
Q psy14075        215 LPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI--NHLIVPNAGLG  292 (414)
Q Consensus       215 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~g  292 (414)
                      ++.+..+ ++.+.   .......++..+++.++.+++.||+|||+.+..+.++.+++++.+.+.++.  +......++.+
T Consensus       346 ~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  421 (505)
T TIGR00898       346 LVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGK  421 (505)
T ss_pred             Hhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence            3333322 34442   233445567888899999999999999999999988888887777665543  33333344444


Q ss_pred             HHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        293 FAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ++.+...+   ....+..|.+|++.|+++.|+.+....+|+.++|.+.+ + +..++...+.+.+++.+++.+..+++++
T Consensus       422 ~~~~~~~~---~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpe  496 (505)
T TIGR00898       422 FGITSAFQ---MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPE  496 (505)
T ss_pred             HHHHHHHH---HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcC
Confidence            44444433   23345679999999999999999999999999999998 3 4456667777777777777666666654


Q ss_pred             C
Q psy14075        373 P  373 (414)
Q Consensus       373 ~  373 (414)
                      .
T Consensus       497 t  497 (505)
T TIGR00898       497 T  497 (505)
T ss_pred             C
Confidence            3

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=100.00  E-value=2.2e-33  Score=271.45  Aligned_cols=351  Identities=17%  Similarity=0.102  Sum_probs=260.1

Q ss_pred             cchhhhhhhcCC--------cchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh---hhHHH
Q psy14075         17 ARENRHKYLMGE--------TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---RTYGV   85 (414)
Q Consensus        17 ~~~~~~~~~g~s--------~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~   85 (414)
                      ..|.+..+++.+        ..+.+++.+.+.++..++++++|+++||+|||++++.+.++++++.+++.+.   .+++.
T Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (481)
T TIGR00879        50 ALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEM  129 (481)
T ss_pred             hhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence            345666777666        8999999999999999999999999999999999999999999999998554   45668


Q ss_pred             HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhh---hHhhhhcCChhHHHHHHHHHHH
Q psy14075         86 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG---GIMYQFVGKTAPFLILSALALG  162 (414)
Q Consensus        86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~---~~l~~~~gw~~~f~~~~~~~~~  162 (414)
                      +++.|+++|++.+...+...+++.|++|+ ++|++++++.+.+.++|..+++.++   ....+..+||+.|++.++..++
T Consensus       130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~  208 (481)
T TIGR00879       130 LIVGRVLLGIGVGIASALVPMYLSEIAPK-ALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGL  208 (481)
T ss_pred             HHHHHHHHHhhhhHHHhHHHHHHHccCCh-hhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999995 9999999999999999999999999   6666778999999997666655


Q ss_pred             HHHHHHHhccCCCC-----CC-C-------------CCCch----------------------hhhhcc------ChHHH
Q psy14075        163 DGLLQLLLLQPGVV-----KQ-E-------------VEPPT----------------------LKSLVM------DPYIL  195 (414)
Q Consensus       163 ~~~~~~~~~~~~~~-----~~-~-------------~~~~~----------------------~~~~~~------~~~~~  195 (414)
                      ..+..++ .+|+++     ++ +             ++...                      +++.++      .+.++
T Consensus       209 ~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (481)
T TIGR00879       209 LFLGLFF-LPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFL  287 (481)
T ss_pred             HHHHHhc-CCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHH
Confidence            5444443 333321     00 0             00000                      011121      12222


Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075        196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI  275 (414)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~  275 (414)
                      ...+..+...........+.|.+.++ .|++..+.+.......++.+++.++.+++.||++||+.+..+..+..++.+.+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~  366 (481)
T TIGR00879       288 GVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVL  366 (481)
T ss_pred             HHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence            22333333333334455566766655 69998888888889999999999999999999999999888888777776665


Q ss_pred             hhh-----hh-----hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075        276 PLA-----RN-----INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN  345 (414)
Q Consensus       276 ~~~-----~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~  345 (414)
                      ...     ++     ........++.+.+.+.....  .......|..|++.|+++.|+.+...++|.+++|.+.+.+.+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~  444 (481)
T TIGR00879       367 GILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGP--VPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE  444 (481)
T ss_pred             HHHhhcccCCcccchhHHHHHHHHHHHHHHHccccC--eehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            521     10     122222333333333333221  112235688889999999999999999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        346 TIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +.|++..|++.+++++++.++.++..+
T Consensus       445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~  471 (481)
T TIGR00879       445 SIGVGGVFIFFGGLNVLGLIFVYFFLP  471 (481)
T ss_pred             hcCccceehhHHHHHHHHHHHHheecc
Confidence            999999999888888777776655443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=100.00  E-value=4.9e-32  Score=255.52  Aligned_cols=330  Identities=19%  Similarity=0.231  Sum_probs=257.5

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      +..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|+
T Consensus        29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~  108 (394)
T PRK11652         29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGL  108 (394)
T ss_pred             ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence            34688999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      +.+...+....+..|+++ +++|+++++..+.+..++..++|.+++.+.++.|||+.|++.++..++..+...+..||++
T Consensus       109 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~  187 (394)
T PRK11652        109 GTGVGGVMARTLPRDLYE-GTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR  187 (394)
T ss_pred             hhhHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            999888888889999998 4899999999999999999999999999999899999999998877766655555555543


Q ss_pred             CCCCCC---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075        176 VKQEVE---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG  252 (414)
Q Consensus       176 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~  252 (414)
                      ++++++   .+++++.+|+|+++...+..+........+..+.+.++++.+|.++.+.++......++.+++..+.+++.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~  267 (394)
T PRK11652        188 PADARRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN  267 (394)
T ss_pred             ccccchhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322221   23456778898887666555555555566667778888888899999999988888888999999999999


Q ss_pred             hhhhhHHHHHHH-HHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH
Q psy14075        253 HRMGRYLAALLG-LLIIGICLMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF  329 (414)
Q Consensus       253 d~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  329 (414)
                      ||.+++...... .....+.......  ..+.+......++.+++.+...+.....   ..+..| +.+|++.++.+...
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~-~~~g~~~~~~~~~~  343 (394)
T PRK11652        268 KRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSG---AMEPFP-YLAGTAGALLGGLQ  343 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhcc-ccchHHHHHHHHHH
Confidence            998743332222 2222222222111  1233445556677777777765544433   445555 45699999999999


Q ss_pred             HHHHhHHHHHHHHHHhhhchH
Q psy14075        330 CLGFAIGPAMSGTLVNTIGFE  350 (414)
Q Consensus       330 ~~g~~ig~~~~g~l~~~~g~~  350 (414)
                      .+|..+++.+.+.+.+...+.
T Consensus       344 ~lg~~~~~~~~~~~~~~~~~~  364 (394)
T PRK11652        344 NIGSGLAALLSAMLPQTGQFS  364 (394)
T ss_pred             HHHHHHHHHHHHHccCCchHH
Confidence            999999999999887654333

>PRK11010 ampG muropeptide transporter; Validated

Probab=100.00  E-value=6.2e-32  Score=260.28  Aligned_cols=349  Identities=13%  Similarity=0.136  Sum_probs=265.0

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-----CCchh-HHHHHHHHHHHHHHHHhh---hhHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSLP-MFTGFVIMFLSTLIFAFG---RTYGVLF   87 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~   87 (414)
                      ..|.+.++.|.+.+++|.+ +.....+ ++++++|+++||+     ||||. +..+.+..+++..++++.   ++++.+.
T Consensus        34 ~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~  111 (491)
T PRK11010         34 TLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLA  111 (491)
T ss_pred             HHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Confidence            3577778889999999997 4444444 5899999999999     99885 667888887887777775   4788999


Q ss_pred             HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-hcCChhHHHHHHHHHHHHHHH
Q psy14075         88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-FVGKTAPFLILSALALGDGLL  166 (414)
Q Consensus        88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~~~~~~~~~  166 (414)
                      +.+++.|++.+...+...+++.|++| +++|+++.++...+..+|.++++.++..+.+ ..|||..|++.+++.++..+.
T Consensus       112 ~~~~l~~~~~a~~~i~~~a~~~~~~~-~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~  190 (491)
T PRK11010        112 ALAVVIAFCSASQDIVFDAWKTDVLP-AEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA  190 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999 4999999999999999999999999999998 579999999999888777665


Q ss_pred             HHHhccCCCCC-CCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH-HHH
Q psy14075        167 QLLLLQPGVVK-QEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL-PAS  238 (414)
Q Consensus       167 ~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~-~~~  238 (414)
                      .++. ||++++ ++++      ..++++.+++++.+...+..++..........+.+.|+.+.+|++..+.+.... ...
T Consensus       191 ~~~~-~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~  269 (491)
T PRK11010        191 TLLA-PEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGL  269 (491)
T ss_pred             HHhc-CCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            5553 433221 1111      124566777777766655555555665666677888887778999999999874 556


Q ss_pred             HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh---hhh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy14075        239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI---PLA-RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH  314 (414)
Q Consensus       239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  314 (414)
                      ++.+++.++.|+++||+++|+.+..+.++.++..+.+   ... ++.+......++..++.+...+...   +...+..+
T Consensus       270 i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~---a~~~~l~~  346 (491)
T PRK11010        270 LATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFV---ALLMTLCN  346 (491)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHcC
Confidence            7999999999999999999887776665555443322   222 2332333334443334444433333   33456666


Q ss_pred             ccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        315 TAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       315 ~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ++..++.+|+.+....+|..+++.+.|.+.|..||+..|.+.+++.+.+.+.....++
T Consensus       347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        347 KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7777999999999999999999999999999999999999999988888777776654

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=100.00  E-value=2.8e-32  Score=256.87  Aligned_cols=340  Identities=10%  Similarity=0.022  Sum_probs=263.5

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF---GRTYGVLFLARSL   92 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l   92 (414)
                      +..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++..   .++++.+++.|++
T Consensus        24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l  103 (410)
T TIGR00885        24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFI  103 (410)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999999999999999999999988654   4689999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh--------------------------h
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ--------------------------F  146 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~--------------------------~  146 (414)
                      .|+|.|...+...+++.+..| +++|++.+++.+...++|..++|.+++.+..                          .
T Consensus       104 ~G~g~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (410)
T TIGR00885       104 LTAGLGFLETAANPYILVMGP-ESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL  182 (410)
T ss_pred             HHhhHHHHHhhhhHHHHHHCC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence            999999999999999999998 4899999999999999999999999887742                          2


Q ss_pred             cCChhHHHHHHHHHHHHHHHHHHhccCC-CCCCCC---CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHH
Q psy14075        147 VGKTAPFLILSALALGDGLLQLLLLQPG-VVKQEV---EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDT  222 (414)
Q Consensus       147 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (414)
                      .+||++|++.+++.++..+...+...|+ ++++++   ...+.++++|+|+++...+..+++........++++.|.++.
T Consensus       183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~  262 (410)
T TIGR00885       183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL  262 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4699999999988777655544332222 111111   112445788999998888888888888878888999998763


Q ss_pred             h-CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhh
Q psy14075        223 M-GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSS  301 (414)
Q Consensus       223 ~-g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  301 (414)
                      . +.+....+...........+|+++.+++.||+++|+.+.++..+..+..++....++... ....++.|++.+..+|.
T Consensus       263 ~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~  341 (410)
T TIGR00885       263 IPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPT  341 (410)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHH
Confidence            2 333344455666666788999999999999999999988888888888777777655433 45566677777777665


Q ss_pred             hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh------chHHHHHHHHHHHHH
Q psy14075        302 MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI------GFEWMLFIIAILDFM  362 (414)
Q Consensus       302 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~------g~~~~~~~~~~~~~~  362 (414)
                      ..+.   ..+..+++......++...  .+|+++.|++.|.+.|..      +++..|++...+.+.
T Consensus       342 i~sl---~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~  403 (410)
T TIGR00885       342 IYGI---ALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV  403 (410)
T ss_pred             HHHH---HHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence            5544   4555555543334444433  399999999999999965      477778765444433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=100.00  E-value=2.8e-32  Score=255.77  Aligned_cols=336  Identities=15%  Similarity=0.086  Sum_probs=262.5

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCc----hhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS----LPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL   92 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l   92 (414)
                      .+|.+.+|+|.|.+++|++.+++.++..++++++|++.||+|||    +.+.+.....  .......++++|.+++.|++
T Consensus        26 ~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l  103 (382)
T PRK11128         26 FWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGL  103 (382)
T ss_pred             hHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHH
Confidence            45778899999999999999999999999999999999999994    3333222222  22334446889999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      .|++.+...|...++..++ +  ++|+++++......++|..+||++++.+.+++|||..|++.++..++..+... ..|
T Consensus       104 ~g~~~~~~~~~~~a~~~~~-~--~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~  179 (382)
T PRK11128        104 FNLFFSPLVPLTDALANTW-Q--KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRP  179 (382)
T ss_pred             HHHHHcccccHHHHHHHHH-H--hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccC
Confidence            9999999999888887776 2  57889999999999999999999999999999999999988876555444333 333


Q ss_pred             CCCCC-C--CC---CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075        173 PGVVK-Q--EV---EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN  246 (414)
Q Consensus       173 ~~~~~-~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~  246 (414)
                      +++++ +  ++   ...++++++|+|+++...+..++..........+.|.|+++ .|.++.+.|.+.....++.++...
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~  258 (382)
T PRK11128        180 TIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFA  258 (382)
T ss_pred             CCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHH
Confidence            32111 1  11   13467889999999988777777777777777888998876 799998999999988899999999


Q ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHH
Q psy14075        247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGD  326 (414)
Q Consensus       247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  326 (414)
                      +.+++.||+++|+.+..+.+..+++.+.+...++.+..++..++.|++.+...+....   +..+. +++++++..+..+
T Consensus       259 ~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~  334 (382)
T PRK11128        259 FSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMR---YIAAR-PGSEVIRLQALYS  334 (382)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHC-CHhhhHHHHHHHH
Confidence            9999999999999999999988888877777788777777888888888776444333   33343 4555688888876


Q ss_pred             -HHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075        327 -VAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYA  364 (414)
Q Consensus       327 -~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~  364 (414)
                       ....+|..+||.+.|.+.|.+|+ ..++..+++.+.+.
T Consensus       335 ~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~  372 (382)
T PRK11128        335 ALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL  372 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence             44567789999999999999987 46666665555443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=100.00  E-value=5.3e-31  Score=248.87  Aligned_cols=348  Identities=15%  Similarity=0.118  Sum_probs=253.5

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-----CCch-hHHHHHHHHHHHHHHHHhh---hhHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSL-PMFTGFVIMFLSTLIFAFG---RTYGVLF   87 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~l~   87 (414)
                      .+|.+-++.|.|.+++|++......  .+.++++|+++||+     |||| .+.++.++.+++..+.++.   ++++.++
T Consensus        21 ~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~   98 (402)
T PRK11902         21 TLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLA   98 (402)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHH
Confidence            4688888999999999999777765  58999999999999     8876 6888888888888887776   4578888


Q ss_pred             HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHH
Q psy14075         88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLL  166 (414)
Q Consensus        88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~  166 (414)
                      +..++.++..+...++..+++.|++| +|||+++.++...+.++|.++++.+++.+.+. .|||..|++.++..++..+.
T Consensus        99 ~~~~~~~~~~~~~~~~~~al~~~~~~-~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~  177 (402)
T PRK11902         99 GLAVLVAFLSASQDIVFDAYSTDVLH-PEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT  177 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC-hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence            88888899899999999999999999 48999999999999999999999999999885 59999999999887766554


Q ss_pred             HHHhccCCCCCC-CCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHH-
Q psy14075        167 QLLLLQPGVVKQ-EVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPAS-  238 (414)
Q Consensus       167 ~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~-  238 (414)
                      .++. +|+++++ +++      .+++++++|||.++...+..++..........+.+.++.+.+|.++.+.++.....+ 
T Consensus       178 ~~~~-~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~  256 (402)
T PRK11902        178 TLWA-PEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGL  256 (402)
T ss_pred             HHhc-CCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHH
Confidence            4433 3332221 111      124667889998877666655555443333344555677778999999999876654 


Q ss_pred             HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh---hhh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhh-hhhhcc
Q psy14075        239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI---PLA-RNINHLIVPNAGLGFAIGMVDSSMMPELG-YLVDIR  313 (414)
Q Consensus       239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~  313 (414)
                      ++.+++.++.+++.||+++|+.+..+..+..+..+.+   ... ++.+.......+..+..+.......+... ...+..
T Consensus       257 ~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  336 (402)
T PRK11902        257 AATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSF  336 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4688899999999999999888777666655543332   233 23343333333333333333332333322 233444


Q ss_pred             cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      |    ++..+..+....++..+++.+.|.+.|..||+..|...+++++++.++....++
T Consensus       337 ~----~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~  391 (402)
T PRK11902        337 S----ATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRG  391 (402)
T ss_pred             c----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4    344566666667888877889999999999999999988888887666544433

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=100.00  E-value=9.8e-32  Score=260.81  Aligned_cols=342  Identities=15%  Similarity=0.092  Sum_probs=243.6

Q ss_pred             cCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHhhhhhh
Q psy14075         26 MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT------YGVLFLARSLQGIGSSC   99 (414)
Q Consensus        26 g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~   99 (414)
                      +.++.+.+++.+.+.+++.++++++|+++||+|||+++.++.++..++.++++++++      ++.++++|+++|++.|.
T Consensus        52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~  131 (502)
T TIGR00887        52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG  131 (502)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence            345667899999999999999999999999999999999999999999999988766      78999999999999999


Q ss_pred             hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-----------------------hcCChhHHHHH
Q psy14075        100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-----------------------FVGKTAPFLIL  156 (414)
Q Consensus       100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-----------------------~~gw~~~f~~~  156 (414)
                      ..+....++.|++|+ ++|++++++.+....+|.++++.++..+..                       .++||+.|.+.
T Consensus       132 ~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~  210 (502)
T TIGR00887       132 DYPLSAIITSEFATK-KWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFG  210 (502)
T ss_pred             hhHHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHH
Confidence            999999999999995 999999999999999999999988876542                       14799999888


Q ss_pred             HHHHHHHHHHHHHhccCCCC------CC-C------------------C-----------CCchhhhhccC---hHH---
Q psy14075        157 SALALGDGLLQLLLLQPGVV------KQ-E------------------V-----------EPPTLKSLVMD---PYI---  194 (414)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~------~~-~------------------~-----------~~~~~~~~~~~---~~~---  194 (414)
                      ++.+++..+..++ .||+++      ++ +                  +           .+.++++++++   ++.   
T Consensus       211 ~ip~~i~~~~~~~-lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  289 (502)
T TIGR00887       211 AVPALLALYFRLT-IPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKH  289 (502)
T ss_pred             HHHHHHHHHHHHh-CCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHH
Confidence            8777665555443 343321      00 0                  0           00134455542   121   


Q ss_pred             -HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhh------------HhHHHHHHHHhhhhhhhhhhhhhhhHHHH
Q psy14075        195 -LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGV------------SFLPASISYLIGTNLFGPLGHRMGRYLAA  261 (414)
Q Consensus       195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~~  261 (414)
                       +......+.....+++...+.|.++++ .|++..+.+.            ......++.+++.++.+++.||+|||+.+
T Consensus       290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l  368 (502)
T TIGR00887       290 LLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ  368 (502)
T ss_pred             HHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH
Confidence             111222333344555677788998875 6877543221            12334456677888999999999999998


Q ss_pred             HHHHHHHHHHHHHhhhhhh---hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHH
Q psy14075        262 LLGLLIIGICLMMIPLARN---INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPA  338 (414)
Q Consensus       262 ~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~  338 (414)
                      ..+..+.++++.++....+   ........++.....+..  .......+..|.+|++.|+++.|+.+....++++++|.
T Consensus       369 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~  446 (502)
T TIGR00887       369 LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFG--PNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQF  446 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcC--CCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHH
Confidence            8888777776655554321   111111111111111111  11222234679999999999999999999999999999


Q ss_pred             HHHHHHhh----------hchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        339 MSGTLVNT----------IGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       339 ~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +.+.+.|.          .++...|.+.+++.+++.+..+++++
T Consensus       447 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpE  490 (502)
T TIGR00887       447 GFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPE  490 (502)
T ss_pred             HhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEecc
Confidence            99999884          34556777777777766555544444

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK09528 lacY galactoside permease; Reviewed

Probab=100.00  E-value=6.3e-32  Score=256.77  Aligned_cols=345  Identities=14%  Similarity=0.125  Sum_probs=247.7

Q ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---hhhh-----HHHHHHHHHH
Q psy14075         21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---FGRT-----YGVLFLARSL   92 (414)
Q Consensus        21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~-----~~~l~~~r~l   92 (414)
                      +.+++|.|+.++|++.+.+.+++.++++++|+++||+||||+++++..+.+++.....   .++.     ....++.++.
T Consensus        37 l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (420)
T PRK09528         37 LHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIY  116 (420)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566999999999999999999999999999999999999999887766665543221   1111     1112223333


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      .|.+.....+....+..+ .+  +++++.++......++|..++|++++.+.+ .+|+++|++.+++.++..+..++..+
T Consensus       117 ~~~~~~~~~~~~~~~~~~-~~--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~  192 (420)
T PRK09528        117 LGFGFLAGAGAIEAYIER-VS--RRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKP  192 (420)
T ss_pred             hhhhhccchhhhhhHHHH-HH--hhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccc
Confidence            333333333333333322 22  467788899999999999999999999887 58999999998888777666665554


Q ss_pred             CCCCCC--------CCCC---chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHh---CCCccchhhHhHHHH
Q psy14075        173 PGVVKQ--------EVEP---PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTM---GADKWQQGVSFLPAS  238 (414)
Q Consensus       173 ~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~  238 (414)
                      |++++.        ++++   ++.++.+|||+++...+........+.....+.|.|+.+.+   +.+..+.+...+...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  272 (420)
T PRK09528        193 DAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQV  272 (420)
T ss_pred             cccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Confidence            433221        0111   23445778888776555554444555555556777776643   455567788888888


Q ss_pred             HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075        239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY  318 (414)
Q Consensus       239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (414)
                      +...++.++.|++.||+++|+.+..+..+..++.+++.+.++.+.+.....+.+++.+...+   ....+..+..|++.+
T Consensus       273 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~---~~~~~~~~~~~~~~~  349 (420)
T PRK09528        273 FLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV---GVFKYITLNFDVRLS  349 (420)
T ss_pred             HHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHcCccce
Confidence            99999999999999999999998888888888888877777777666666666665554422   233456677788888


Q ss_pred             hhHHhH-HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        319 GSVYAI-GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       319 g~~~g~-~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ++..+. .+....+|..++|.+.|++.|..||+..|...+++.++..++.+...+
T Consensus       350 a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~  404 (420)
T PRK09528        350 ATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS  404 (420)
T ss_pred             eeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence            887766 677789999999999999999999999999988887776666555444

>TIGR00883 2A0106 metabolite-proton symporter

Probab=100.00  E-value=1.2e-31  Score=252.82  Aligned_cols=339  Identities=19%  Similarity=0.247  Sum_probs=251.7

Q ss_pred             hhhhhhhc--CCcchHHHHHHH-----HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH-------
Q psy14075         19 ENRHKYLM--GETKAVGVMFGS-----KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG-------   84 (414)
Q Consensus        19 ~~~~~~~g--~s~~~~g~~~s~-----~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~-------   84 (414)
                      +.+.+++.  .++++.+.+.+.     ..++..+++++.|+++||+||||++..+.++..++.++++++++++       
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (394)
T TIGR00883        17 VLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAP   96 (394)
T ss_pred             HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHH
Confidence            34444443  456666665543     3334457899999999999999999999999999999999999875       


Q ss_pred             -HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHHH
Q psy14075         85 -VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFLI  155 (414)
Q Consensus        85 -~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~~  155 (414)
                       .+++.|+++|++.+...+...+++.|++|+ ++|++..+..+.+..+|..+++.++..+.        +.++||+.|++
T Consensus        97 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~  175 (394)
T TIGR00883        97 ILLLLARLIQGFSLGGEWGGAALYLAEYAPP-GKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLV  175 (394)
T ss_pred             HHHHHHHHHHHhhccccccccHHHhhhcCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHH
Confidence             488999999999999999999999999994 99999999999999999999998876654        35789999998


Q ss_pred             HHHHHHHHHHHHHHhccCCCC-----CCCCCCchhhhhccChH--HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc
Q psy14075        156 LSALALGDGLLQLLLLQPGVV-----KQEVEPPTLKSLVMDPY--ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW  228 (414)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  228 (414)
                      .+++.++.........++++.     ++++++.+.++.+++++  ++......++..........+.|.|+++.+|.++.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  255 (394)
T TIGR00883       176 SAVLVLIGLYLRRNLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSAN  255 (394)
T ss_pred             HHHHHHHHHHHHHhcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence            877766554443333322211     11122334566676655  66666666666777777888999999888899999


Q ss_pred             chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH-HHh-hhh--hhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075        229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL-MMI-PLA--RNINHLIVPNAGLGFAIGMVDSSMMP  304 (414)
Q Consensus       229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~-~~~-~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~  304 (414)
                      +.+.......++..++.++.+++.||++||+.+..+..+..+.. ... ...  ++.+......++.+++.+...+... 
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-  334 (394)
T TIGR00883       256 SALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMG-  334 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHH-
Confidence            99999999999999999999999999999987765544433322 222 221  2344444555666666666644443 


Q ss_pred             hhhhhhhcccccchhhHHhHH-HHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHH
Q psy14075        305 ELGYLVDIRHTAVYGSVYAIG-DVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDF  361 (414)
Q Consensus       305 ~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~  361 (414)
                        ....|..|++.|+++.++. +....+|..++|.+.|++.|+.| ++..++...++.+
T Consensus       335 --~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l  391 (394)
T TIGR00883       335 --SFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL  391 (394)
T ss_pred             --HHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence              3466888888999999984 45567888899999999999988 7766666554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>KOG2504|consensus

Probab=100.00  E-value=1.9e-32  Score=260.56  Aligned_cols=351  Identities=25%  Similarity=0.342  Sum_probs=308.0

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHH-HHH
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR-SLQ   93 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~   93 (414)
                      -+..+.+.++++.+.++++|+.++..-.+.+..|+.+.+.||+|.|++.+.|.++.+++.++.+|++++|++++.. ++.
T Consensus        66 Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~  145 (509)
T KOG2504|consen   66 GLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIG  145 (509)
T ss_pred             hhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence            3456889999999999999999999999999999999999999999999999999999999999999999999888 889


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      |+|.|..+.++..++..+|+  |+|+.+.|+...+.++|..+-|.+...+.+.+|||+.+++.+.+.+-..+.....+|.
T Consensus       146 G~G~~~~~~paiviv~~YF~--kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~  223 (509)
T KOG2504|consen  146 GLGLGLIYLPAVVILGTYFE--KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPL  223 (509)
T ss_pred             hccchhhhcchhhhhhhHhH--HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999984  8999999999999999999999999999999999999999999987777777766661


Q ss_pred             CCCC-----------------------------C---CC--------------------CCch-h---hhhccChHHHHH
Q psy14075        174 GVVK-----------------------------Q---EV--------------------EPPT-L---KSLVMDPYILIA  197 (414)
Q Consensus       174 ~~~~-----------------------------~---~~--------------------~~~~-~---~~~~~~~~~~~~  197 (414)
                      ..+.                             .   .+                    .+.. .   .+++|+|.++..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~  303 (509)
T KOG2504|consen  224 SPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLL  303 (509)
T ss_pred             CcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHH
Confidence            1110                             0   00                    0001 1   478899999999


Q ss_pred             HHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHHHHh
Q psy14075        198 AGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICLMMI  275 (414)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~~~~  275 (414)
                      .+...+...++.....++|.|.++ .|++..++..++++.++..++++++.|++.|+..  ++....++.+..+++.+..
T Consensus       304 ~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~  382 (509)
T KOG2504|consen  304 ALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFL  382 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999985 7999999999999999999999999999999977  4556667778888888888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHH
Q psy14075        276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLF  354 (414)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~  354 (414)
                      ++.++++.+....+++|++.|.........   ..+..+.++...++|+...+..++..+||++.|++.|..| |...|+
T Consensus       383 p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i---~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~  459 (509)
T KOG2504|consen  383 PFATTYVGLIVFSILFGFCVGSFSSLTPVI---LVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFY  459 (509)
T ss_pred             HHhccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehh
Confidence            888898888999999999998876544433   5577778888999999999999999999999999999998 999999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy14075        355 IIAILDFMYAPLLYLLR  371 (414)
Q Consensus       355 ~~~~~~~~~~~~~~~~~  371 (414)
                      ..+++.+++..++++.+
T Consensus       460 ~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  460 FCGLCFLLSAVLLLILR  476 (509)
T ss_pred             hcChHHHHHHHHHHHhH
Confidence            99999999888777776

>KOG1330|consensus

Probab=100.00  E-value=2.1e-33  Score=251.74  Aligned_cols=331  Identities=20%  Similarity=0.231  Sum_probs=249.0

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      +.+.+++.+|++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+|..++.++.+++++++.+|++.++|.+.|+|
T Consensus        55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG  134 (493)
T KOG1330|consen   55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG  134 (493)
T ss_pred             hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            56788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGLLQLLLLQPGV  175 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~~~  175 (414)
                      .+...|..+++++|.+|+ ++|++++++++.+.++|..+|.+.+..+.++.+ |||.|+..++++++..++.+++.+|++
T Consensus       135 eAs~~~ia~s~IaD~f~~-~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~  213 (493)
T KOG1330|consen  135 EASYSPIAPSLIADSFPD-DKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE  213 (493)
T ss_pred             hhhhcccchhHhhhcCcc-hhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence            999999999999999994 999999999999999999999999999988766 999999999999999999888887765


Q ss_pred             CCCCCC-----------C---chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHH---HhCCCccchhhHhHHHH
Q psy14075        176 VKQEVE-----------P---PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMD---TMGADKWQQGVSFLPAS  238 (414)
Q Consensus       176 ~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~g~~~~~~~  238 (414)
                      +.++++           .   ++.+.+.|+|.+....+......+....+..|.|.+...   ..|.+..+.-++..+..
T Consensus       214 rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~  293 (493)
T KOG1330|consen  214 RGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTC  293 (493)
T ss_pred             cccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHH
Confidence            422111           1   123444566666666666666666666666666665543   34556666667778888


Q ss_pred             HHHHhhhhhhhhhhhhhhhH-------HHH-H---HHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy14075        239 ISYLIGTNLFGPLGHRMGRY-------LAA-L---LGLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPEL  306 (414)
Q Consensus       239 ~~~~~~~~~~g~l~d~~~~~-------~~~-~---~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~  306 (414)
                      .++.+|.+++|.++||+.|+       +.- +   .+..+.+..+.+..... +.....+.++++|...........  .
T Consensus       294 ~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n--~  371 (493)
T KOG1330|consen  294 AGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATN--N  371 (493)
T ss_pred             hhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccc--c
Confidence            99999999999999995431       111 1   11222222222222222 222233444455554444322222  1


Q ss_pred             hhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHhhh-chH
Q psy14075        307 GYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVNTI-GFE  350 (414)
Q Consensus       307 ~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~-g~~  350 (414)
                      -...+..|++.|.+++++...+..+ |.+-+|++.|.+.|+. ||+
T Consensus       372 ~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~  417 (493)
T KOG1330|consen  372 PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK  417 (493)
T ss_pred             ceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence            1245777899999999997666544 5666676999999864 344

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.1e-31  Score=229.63  Aligned_cols=351  Identities=17%  Similarity=0.163  Sum_probs=294.8

Q ss_pred             ccccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075         14 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ   93 (414)
Q Consensus        14 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~   93 (414)
                      .-+.++++.+|+|+|.++.|++++...+...+.+++..+++.|+|.+|.+..++++.+++.++-... +.+.++.+-.+.
T Consensus        31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~  109 (395)
T COG2807          31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLA  109 (395)
T ss_pred             hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999999999999999999999999999877 788888999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhc-
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLL-  171 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~-  171 (414)
                      |.|.+..+....+.+.+.||  |+-+..+|++.+..++|..+++.+.-.+.++. |||....+.+.++++..+.++.-. 
T Consensus       110 G~gIav~nVLLPslIK~~Fp--k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~  187 (395)
T COG2807         110 GAGIAVINVLLPSLIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQAL  187 (395)
T ss_pred             HhhHHHHHHhhhHHHHhhcc--cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            99999999999999999997  68999999999999999999999999998887 799999999999988777666542 


Q ss_pred             cCCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhh
Q psy14075        172 QPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL  251 (414)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l  251 (414)
                      +++....+.+..+..+++|+|.-|.+.+.+.++++.++....|+|.++.| .|+|+.++|.+.+...+.++...+....+
T Consensus       188 r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~l  266 (395)
T COG2807         188 REQAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLL  266 (395)
T ss_pred             cccccccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence            22122233333445679999999999999999999999999999999999 59999999999999999999999999999


Q ss_pred             hhhh-hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHH
Q psy14075        252 GHRM-GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFC  330 (414)
Q Consensus       252 ~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  330 (414)
                      .+|. ++|+.......++.++++.+.+.+....+.. .+++|++.|..++.......  .+..++++.++-.|+.+.+++
T Consensus       267 a~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~--~rs~~a~~Aa~LSgmaQg~GY  343 (395)
T COG2807         267 ARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLIL--LRSSDAAIAAALSGMAQGVGY  343 (395)
T ss_pred             HHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHH--hhcCChHHHHHHHHHhhhhhH
Confidence            9975 4566667777777788777777654333333 58889998888776555532  233446677899999999999


Q ss_pred             HHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        331 LGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       331 ~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      +-.++||++.|++.|.+| |+..+.....+.+...+.-+..-
T Consensus       344 llAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~  385 (395)
T COG2807         344 LLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG  385 (395)
T ss_pred             HHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999988 88777776666665555544443

>TIGR00895 2A0115 benzoate transport

Probab=100.00  E-value=5.5e-32  Score=255.45  Aligned_cols=322  Identities=20%  Similarity=0.222  Sum_probs=254.3

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++..++++++.+++.|++.|++
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  118 (398)
T TIGR00895        39 AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLG  118 (398)
T ss_pred             hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcc
Confidence            46788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+...+...+++.|++| +++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..++.+...+++++
T Consensus       119 ~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (398)
T TIGR00895       119 LGGLMPNLNALVSEYAP-KRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID  197 (398)
T ss_pred             cccchhhHHHHHHHHcC-HHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence            99999999999999999 59999999999999999999999999999999999999999876666666655555444321


Q ss_pred             C---C---------------------------CCCCc---h-hhhhccC---hHHHHHHHHHHHHHHHHHhhhhchHHHH
Q psy14075        177 K---Q---------------------------EVEPP---T-LKSLVMD---PYILIAAGAITFANTGIAMLEPSLPIWM  219 (414)
Q Consensus       177 ~---~---------------------------~~~~~---~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (414)
                      .   +                           ++++.   + .+.++++   +..+...+..++..........+.|.+ 
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  276 (398)
T TIGR00895       198 FLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKL-  276 (398)
T ss_pred             HHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            0   0                           00000   1 1112222   233344444455556666777788854 


Q ss_pred             HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q psy14075        220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVD  299 (414)
Q Consensus       220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  299 (414)
                      .+..|.++.+.+.......++.+++.++.+++.||+++|+.............++....++.+......++.|++.+...
T Consensus       277 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  356 (398)
T TIGR00895       277 MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQ  356 (398)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence            45579999999999999999999999999999999999855444333333333333324455556667777888877775


Q ss_pred             hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075        300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL  343 (414)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l  343 (414)
                      +...   +...+..|++.|+++.|+.+....+|..++|.+.|++
T Consensus       357 ~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       357 SGLY---ALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHH---HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            5444   3467888899999999999999999999999999875

>TIGR00889 2A0110 nucleoside transporter

Probab=100.00  E-value=6.8e-31  Score=248.45  Aligned_cols=343  Identities=13%  Similarity=0.055  Sum_probs=253.8

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCC-chhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS   97 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~   97 (414)
                      +.+.+++|.|..|+|++.+.+.++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+++.|++.|++.
T Consensus        27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  106 (418)
T TIGR00889        27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAY  106 (418)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            45667899999999999999999999999999999999965 77888888888888888889999999999999999988


Q ss_pred             hhhhhhHHHHHh--------hcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075         98 SCSSVSGMGMLA--------ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL  169 (414)
Q Consensus        98 ~~~~~~~~~~i~--------~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~  169 (414)
                      +...+...++..        |... ...|.+..|      .+|..++|.+++.+.....|+ +|++.+++.++..+..+ 
T Consensus       107 ~~~~~~~~~l~~~~~~~~g~~~~~-~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-  177 (418)
T TIGR00889       107 MPTIALTNSISYANLPQAGLDVVT-DFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-  177 (418)
T ss_pred             ccHHHHHHHHHHHHHhhcCCCchh-cCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-
Confidence            777776655432        2222 134455554      468888888888773322344 46666666666555444 


Q ss_pred             hccCCCCCCCCCC--------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc--------cchhhH
Q psy14075        170 LLQPGVVKQEVEP--------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK--------WQQGVS  233 (414)
Q Consensus       170 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~g~~  233 (414)
                      ..||+++++++++        .+.++++|+|+++...+..++..........+.|.|+++ .|.++        ...+..
T Consensus       178 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~  256 (418)
T TIGR00889       178 TLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIW  256 (418)
T ss_pred             cCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHH
Confidence            4444332211111        123467888888777776666666555666777888876 45443        456888


Q ss_pred             hHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-h---hHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy14075        234 FLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-N---INHLIVPNAGLGFAIGMVDSSMMPELGYL  309 (414)
Q Consensus       234 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  309 (414)
                      .+...+..+++.+..+++.||+|+|+++..+.++..++..++.... +   .+.+.+..++.|++.+...+..   ...+
T Consensus       257 ~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~---~~~i  333 (418)
T TIGR00889       257 MSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG---SVFV  333 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH---HHHH
Confidence            8999999999999999999999999999999998888766665532 1   2334455667777766553332   3456


Q ss_pred             hhcccccchhhHHhHHH-HHHHHHHhHHHHHHHHHHhhh------chHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075        310 VDIRHTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTI------GFEWMLFIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       310 ~~~~~~~~~g~~~g~~~-~~~~~g~~ig~~~~g~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (414)
                      .+..|++.|+++.|+.+ ....+|..+||.+.|++.|+.      ||+.+|.+.+++.++..++.+++.+++
T Consensus       334 ~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~  405 (418)
T TIGR00889       334 EKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS  405 (418)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            78889999999999997 567899999999999999984      589999988888777777666665544

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=100.00  E-value=1.5e-31  Score=249.82  Aligned_cols=310  Identities=17%  Similarity=0.183  Sum_probs=237.3

Q ss_pred             cchh-hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHh
Q psy14075         17 AREN-RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQG   94 (414)
Q Consensus        17 ~~~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G   94 (414)
                      ..|. +++++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+.++.++..++.+++++++ +++.+++.|+++|
T Consensus        23 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g  102 (366)
T TIGR00886        23 LAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG  102 (366)
T ss_pred             hhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            4564 7899999999999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh----------hcCChhHH-HHHHHHHHHH
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ----------FVGKTAPF-LILSALALGD  163 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~----------~~gw~~~f-~~~~~~~~~~  163 (414)
                      ++.+. .+...+++.|++|+ ++|++++++.....++|..+++.+++.+..          +.+||+.| +..+++..+.
T Consensus       103 ~~~~~-~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  180 (366)
T TIGR00886       103 IAGGS-FASCMPWISFFFPK-KIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLP  180 (366)
T ss_pred             Hhchh-hHhHHHHHHHhcCH-hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHH
Confidence            98665 45668899999994 999999999998888888888887766654          24899999 4445555554


Q ss_pred             HHHHHHhccCCCCCC-C---CCCc------------hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        164 GLLQLLLLQPGVVKQ-E---VEPP------------TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       164 ~~~~~~~~~~~~~~~-~---~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      .++.+...+++++++ +   .+.+            +.++.+++|+++...+..++..........+.|.|+++.+|.++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  260 (366)
T TIGR00886       181 ALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSK  260 (366)
T ss_pred             HHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence            444444443322211 1   1111            45567888888887777777777777788899999999899999


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh--hh--hhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL--AR--NINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~--~~--~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      .+.+.+.....+..++++++.|++.||+++|+....+......+..++..  ..  +.+.......+.+++.+...+...
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  340 (366)
T TIGR00886       261 VTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTF  340 (366)
T ss_pred             HHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhh
Confidence            99999999999999999999999999999988777766666555444433  21  333333444444555555544444


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHHHHHH
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVAFCLG  332 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g  332 (414)
                      +.   ..+..| +.+|+++|+.+...++|
T Consensus       341 ~~---~~~~~~-~~~g~~~g~~~~~~~~g  365 (366)
T TIGR00886       341 AL---VPHIFR-RATGAVSGLVGAIGNLG  365 (366)
T ss_pred             hc---chhhch-hhcccHHHHHHHhccCC
Confidence            33   334444 57799999988877665

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=100.00  E-value=1.2e-30  Score=246.13  Aligned_cols=341  Identities=13%  Similarity=0.133  Sum_probs=256.4

Q ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH---Hhh-----hhHHHHHHHHHH
Q psy14075         21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFG-----RTYGVLFLARSL   92 (414)
Q Consensus        21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-----~~~~~l~~~r~l   92 (414)
                      +.+++|.++.+.|++.+.+.+++.+++++.|+++||+||||.++.+....+++....   .+.     +.+..+.+.|++
T Consensus        29 ~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (396)
T TIGR00882        29 LHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLY  108 (396)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999999988777666544332   112     123445667888


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      .|++.+...+...++..|..   +++++.++......++|..++|++++.+.+ .+||.+|++.+++.++..+..+...+
T Consensus       109 ~g~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~  184 (396)
T TIGR00882       109 LGFVFSAGAGAIEAYIEKVS---RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKP  184 (396)
T ss_pred             HHHHhccchhhHHHHHHHhh---hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCC
Confidence            89888888888777777743   344567788888899999999999998866 59999999999888887766655544


Q ss_pred             CCCCCC-----------CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHh---CCCccchhhHhHHHH
Q psy14075        173 PGVVKQ-----------EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTM---GADKWQQGVSFLPAS  238 (414)
Q Consensus       173 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~  238 (414)
                      ++++++           +++.++.++++|||.++...+..++....+.....+.+.|+++.+   +.+....|...+...
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~  264 (396)
T TIGR00882       185 KAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGE  264 (396)
T ss_pred             CCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence            432211           011234567889998877766666656666666667888887765   445556788888888


Q ss_pred             HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075        239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY  318 (414)
Q Consensus       239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (414)
                      +...++....+++.||+++|+.+.++..+.++........++.+...+..++.|++......   ....+..+..+++.+
T Consensus       265 i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~---~~~~~~~~~~~~~~~  341 (396)
T TIGR00882       265 LLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLV---GCFKYITSQFDVRLS  341 (396)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCCcceE
Confidence            88899999999999999999999888888888777766666766666666666655433311   222334455666666


Q ss_pred             hhHHhH-HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075        319 GSVYAI-GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       319 g~~~g~-~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  368 (414)
                      ++..+. .+....+|+.++|.+.|++.|..||+.+|.+.+++.++..++..
T Consensus       342 at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~  392 (396)
T TIGR00882       342 ATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV  392 (396)
T ss_pred             EEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            776666 57888999999999999999999999999998888877766543

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=100.00  E-value=1.5e-30  Score=248.89  Aligned_cols=331  Identities=18%  Similarity=0.179  Sum_probs=257.9

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCch-hHHHHHHHHHHHHHHHHhhhh------HHHH
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYSL-PMFTGFVIMFLSTLIFAFGRT------YGVL   86 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l   86 (414)
                      .+.+.+++|+++.++|++.++..+..++.+|+.|+++||    +|||| .++.+....+++.+++.+.++      ...+
T Consensus        23 ~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  102 (437)
T TIGR00792        23 LFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYA  102 (437)
T ss_pred             HHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence            466778899999999999999999999999999999998    67755 577888888888888877654      4567


Q ss_pred             HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCChhHHHHHHHH
Q psy14075         87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKTAPFLILSAL  159 (414)
Q Consensus        87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f~~~~~~  159 (414)
                      ++.+++.+++.+...++..++..|..++.++|++..++.+.+..+|..+++.+.+.+..       ..+||+.+.+.+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l  182 (437)
T TIGR00792       103 YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALI  182 (437)
T ss_pred             HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHH
Confidence            77888889998888888888999988545899999999999999998887776655543       45899999999998


Q ss_pred             HHHHHHHHHHhccCCCCC--CC-CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhh
Q psy14075        160 ALGDGLLQLLLLQPGVVK--QE-VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGV  232 (414)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~--~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  232 (414)
                      .++..+..++..+|++++  ++ +++    +.++++++||.++...+..++..........+.+.|.++.++ ++.+.+.
T Consensus       183 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  261 (437)
T TIGR00792       183 GVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSY  261 (437)
T ss_pred             HHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHH
Confidence            888777766666654422  11 111    235667889999888777777777777666666666666555 4556677


Q ss_pred             HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075        233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVD  311 (414)
Q Consensus       233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  311 (414)
                      +.....++.+++.++.+++.||+|+|+.+..+..+..++.+.+.+.+ +.+...+..++.+++.+...+...+..++..|
T Consensus       262 ~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  341 (437)
T TIGR00792       262 MGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVD  341 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            77778899999999999999999999999888888887776665543 44455566677788887776666666555443


Q ss_pred             c----ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075        312 I----RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF  349 (414)
Q Consensus       312 ~----~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~  349 (414)
                      .    .+++.+|..+|+.+....+|..+++.+.|.+.+..||
T Consensus       342 ~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~  383 (437)
T TIGR00792       342 YGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY  383 (437)
T ss_pred             hhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            2    2345679999999999999999999999999988776

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR00901 2A0125 AmpG-related permease

Probab=99.98  E-value=6.2e-30  Score=237.90  Aligned_cols=309  Identities=15%  Similarity=0.079  Sum_probs=241.7

Q ss_pred             cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-----CCchh-HHHHHHHHHHHHHHHHhh---hhHHH
Q psy14075         15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSLP-MFTGFVIMFLSTLIFAFG---RTYGV   85 (414)
Q Consensus        15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~   85 (414)
                      ....|.+.+|+|+|.+|+|+..+. .+...+ .+++|+++||+     ||||. ++.+.++.++...+.++.   .+.+.
T Consensus         8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~   85 (356)
T TIGR00901         8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL   85 (356)
T ss_pred             HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence            345788999999999999999765 555555 99999999998     89887 567788888887777776   46677


Q ss_pred             HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC--------ChhHHHHHH
Q psy14075         86 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG--------KTAPFLILS  157 (414)
Q Consensus        86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g--------w~~~f~~~~  157 (414)
                      +....++.+++.+...++..+++.|++| +|+|+++.++...+.++|.++++.+++.+.++.+        ||..|++.+
T Consensus        86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~a  164 (356)
T TIGR00901        86 LAGLAFLIAFFSATQDIALDAWRLEILS-DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTA  164 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCC-HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHH
Confidence            7788888899999999999999999999 4999999999999999999999999999998888        999999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCC-------CchhhhhccChH---HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        158 ALALGDGLLQLLLLQPGVVKQEVE-------PPTLKSLVMDPY---ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      +..++..+..++..||++++++++       .+++++++++|.   ++...+..++....+.....+.|.|+++ +|+++
T Consensus       165 i~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~  243 (356)
T TIGR00901       165 LLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSK  243 (356)
T ss_pred             HHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence            988776666555555432221111       123455666664   6666666666777778888999999988 89999


Q ss_pred             cchhhHhHHHH-HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh-----------hhhHHHHHHHHHHHHHH
Q psy14075        228 WQQGVSFLPAS-ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA-----------RNINHLIVPNAGLGFAI  295 (414)
Q Consensus       228 ~~~g~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~g~~~  295 (414)
                      .+.+......+ ++.+++.++.+++.||+++|+.+..+.++.+++..++.+.           ++.+......++.+++.
T Consensus       244 ~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  323 (356)
T TIGR00901       244 EEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTG  323 (356)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHh
Confidence            99998887666 5778899999999999999988888888777766554443           23344455566667777


Q ss_pred             HhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHH
Q psy14075        296 GMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFC  330 (414)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~  330 (414)
                      +...+...   +...+..|+++||+.+|+.++..+
T Consensus       324 ~~~~~~~~---~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       324 GLGTVAFV---AFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHH---HHHHHhcCCCccHHHHHHHHHHHh
Confidence            77755554   446688889999999999887654

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.98  E-value=2.1e-30  Score=275.14  Aligned_cols=331  Identities=18%  Similarity=0.181  Sum_probs=254.1

Q ss_pred             chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075         30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT---GFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMG  106 (414)
Q Consensus        30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~  106 (414)
                      ...++..+++.+++.++++++|+++||+|||+++..   ..+...+..+.....++++.++++|+++|++.+...|+..+
T Consensus        52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a  131 (1140)
T PRK06814         52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS  131 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence            457888999999999999999999999999998643   22333333333334589999999999999999999999999


Q ss_pred             HHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCC--CC--
Q psy14075        107 MLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEV--EP--  182 (414)
Q Consensus       107 ~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--  182 (414)
                      ++.+++|+ ++|++++|+.+++.++|.++||++++++.+..+|++.|+...+..++..++.++..++++++.+.  +.  
T Consensus       132 ~l~~~~~~-~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (1140)
T PRK06814        132 ILPDHLNK-DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPDLKIDRNI  210 (1140)
T ss_pred             hhHhhcCc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCeeccch
Confidence            99999995 99999999999999999999999999999999999999555555554444444433322211111  11  


Q ss_pred             -----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075        183 -----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR  257 (414)
Q Consensus       183 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~  257 (414)
                           ..++.+.++|.++...+..++.++....+..++|.|+++.+|.++.+.|++.+..+++.+++.++.+++.|+..+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~  290 (1140)
T PRK06814        211 IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRIT  290 (1140)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence                 135567788999888888888777778888899999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHHHHHHHHhhhh--------------------hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc
Q psy14075        258 YLAALLGLLIIGICLMMIPLA--------------------RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV  317 (414)
Q Consensus       258 ~~~~~~~~~~~~i~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  317 (414)
                      ++.+..+.++.+++.+.+.+.                    .+.+.+.+..+++|++.+...+...   +...+..|++.
T Consensus       291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~  367 (1140)
T PRK06814        291 LLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLF---AALQAWANPAH  367 (1140)
T ss_pred             eeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHH---HHHHhhCCccc
Confidence            665555555544444333321                    4455556667777887777654433   44667888999


Q ss_pred             hhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchHHHHHHHHHHHHHHH
Q psy14075        318 YGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFEWMLFIIAILDFMYA  364 (414)
Q Consensus       318 ~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~~~~~~~~~~~~~~~  364 (414)
                      +|+++|..++...++..+++.+.|.+.+ ..++...+.+.+.+.++..
T Consensus       368 ~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  415 (1140)
T PRK06814        368 RARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA  415 (1140)
T ss_pred             ceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999985 3456666665555444433

>KOG2533|consensus

Probab=99.98  E-value=4.3e-31  Score=248.70  Aligned_cols=332  Identities=16%  Similarity=0.110  Sum_probs=252.1

Q ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q psy14075         21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCS  100 (414)
Q Consensus        21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~  100 (414)
                      +.+|.+....+.+.+.++++++++++++++|.+.||++..+.+....+.+++..++....+|++.+++.|++.|+.++..
T Consensus        72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~  151 (495)
T KOG2533|consen   72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG  151 (495)
T ss_pred             CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence            45899999999999999999999999999999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh------hcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075        101 SVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ------FVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus       101 ~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      +|....+++.|+. +++|++.++++....++|.++|.+++..+.+      ..||||.|++.+++.++..++.+++.|+.
T Consensus       152 wP~~~~~lg~wy~-~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~  230 (495)
T KOG2533|consen  152 WPGVVAILGNWYG-KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN  230 (495)
T ss_pred             chHHHHHHHhhcC-hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence            9999999999999 5999999999999999999999999988643      46899999999999999999988888765


Q ss_pred             CCCC-------------------------CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc
Q psy14075        175 VVKQ-------------------------EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ  229 (414)
Q Consensus       175 ~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  229 (414)
                      +.+.                         +.+...+++.+++|++|...+..++.....+++.+|+|.|+++..|+|..+
T Consensus       231 P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~  310 (495)
T KOG2533|consen  231 PSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ  310 (495)
T ss_pred             hhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH
Confidence            5310                         011234678899999999999999999999999999999999966799999


Q ss_pred             hhhHhHHHHHHHHhhhhhhhhhhhh----hhhHHHHHHHHHHHH-HHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075        230 QGVSFLPASISYLIGTNLFGPLGHR----MGRYLAALLGLLIIG-ICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMP  304 (414)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  304 (414)
                      ++.+..+..++++++.+++|.++||    ..+|........+.. ++...+.............+....+.....+....
T Consensus       311 a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (495)
T KOG2533|consen  311 ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALS  390 (495)
T ss_pred             hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHh
Confidence            9999999999999999999999999    555555555544443 34344444433333333333333333333222222


Q ss_pred             hhhhhhhccccc-chhhHHhHHHHHHHHHHhHHHH-HHHHHHhhhchHHHHHHH
Q psy14075        305 ELGYLVDIRHTA-VYGSVYAIGDVAFCLGFAIGPA-MSGTLVNTIGFEWMLFII  356 (414)
Q Consensus       305 ~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~ig~~-~~g~l~~~~g~~~~~~~~  356 (414)
                         ...+....+ .+-+..+......+.++.++|. ..+.....+++...|...
T Consensus       391 ---w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~  441 (495)
T KOG2533|consen  391 ---WTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML  441 (495)
T ss_pred             ---hccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence               222332222 2233333333333444443333 333333345677777433

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.97  E-value=6e-29  Score=220.06  Aligned_cols=342  Identities=15%  Similarity=0.167  Sum_probs=283.0

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHH
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSL   92 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l   92 (414)
                      +.+|.+++.+++|..|.+++..+++-++.+++++.|++.+|+|+|+.++.|..++++++.+..   ...++..++++-++
T Consensus        34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFi  113 (422)
T COG0738          34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFI  113 (422)
T ss_pred             hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence            457999999999999999999999999999999999999999999999999999999999984   66789999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-------------------cCChhHH
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-------------------VGKTAPF  153 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-------------------~gw~~~f  153 (414)
                      .|.|.+...++...+++...++ ++..+.+++.+..+++|..++|++++.+..+                   -.||++|
T Consensus       114 la~Gi~~LetaaNp~v~~lg~~-~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY  192 (422)
T COG0738         114 LASGIGLLETAANPYVTLLGKP-ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY  192 (422)
T ss_pred             HHhhhHHHHhccchHHHHhCCc-hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence            9999999999999999999985 8899999999999999999999999988862                   2489999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCCCCCCC---Cc--hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc
Q psy14075        154 LILSALALGDGLLQLLLLQPGVVKQEVE---PP--TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW  228 (414)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  228 (414)
                      ...+...++..+.....+.|+.++..++   +.  ...+++|+|+++...+..+++-.......+|++.|+.+..|.+..
T Consensus       193 l~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~  272 (422)
T COG0738         193 LILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQ  272 (422)
T ss_pred             HHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHH
Confidence            9988888777776666553332222111   11  467899999999999999999999999999999999998899999


Q ss_pred             chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075        229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGY  308 (414)
Q Consensus       229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  308 (414)
                      ++....+.+..+.++|++++.++.+|++..|.+........+.++...+.++... ....++.|+..+..+|...+... 
T Consensus       273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l~~ig~F~simfPTIfslal-  350 (422)
T COG0738         273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYALFLIGLFNSIMFPTIFSLAL-  350 (422)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHHHHHHHHhHHHHHHHHHHHH-
Confidence            9999999999999999999999999999988888877776666666666666443 45567788888888777666643 


Q ss_pred             hhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075        309 LVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYA  364 (414)
Q Consensus       309 ~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~  364 (414)
                        +..|++  ....|..-.+..+|+++-|++.|++.|..|....+......+.+.+
T Consensus       351 --~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV  402 (422)
T COG0738         351 --KNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV  402 (422)
T ss_pred             --hccCcc--ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence              444422  2233333344568999999999999999998777775555555544

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.97  E-value=4e-29  Score=266.24  Aligned_cols=340  Identities=17%  Similarity=0.179  Sum_probs=259.3

Q ss_pred             hhhhhhhcCCc--chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHH
Q psy14075         19 ENRHKYLMGET--KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSLQ   93 (414)
Q Consensus        19 ~~~~~~~g~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~   93 (414)
                      +.+..+++.+.  ...+++.+++.+++.++++++|+++||+|||++++++.++..+..++..   .+++++.+++.|+++
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  113 (1146)
T PRK08633         34 NTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLL  113 (1146)
T ss_pred             HHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence            34445566543  4579999999999999999999999999999999998877666555443   457899999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh--------c-CChhHHHHHHHHHHHHH
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF--------V-GKTAPFLILSALALGDG  164 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~-gw~~~f~~~~~~~~~~~  164 (414)
                      |++.+...++..+++.|++|+ ++|++++++.+.+.++|.++|+++++++.+.        + +|++.+.+..+...+..
T Consensus       114 G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (1146)
T PRK08633        114 GAQSAIYSPAKYGIIPELVGK-ENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLG  192 (1146)
T ss_pred             HHHHHhhchHHHhhhHHhcCc-ccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHH
Confidence            999999999999999999995 9999999999999999999999999999876        2 34454444444333333


Q ss_pred             HHHHHhccCCCCCCCC-----C-------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc-chh
Q psy14075        165 LLQLLLLQPGVVKQEV-----E-------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW-QQG  231 (414)
Q Consensus       165 ~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g  231 (414)
                      ++..+..++.++.++.     +       ...++.++++|.++...+..++..........++|.|+.+.+|.+.. +.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g  272 (1146)
T PRK08633        193 LIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQ  272 (1146)
T ss_pred             HHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHH
Confidence            3333333333221111     0       11345567888888777766666666677788899999998999998 899


Q ss_pred             hHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075        232 VSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD  311 (414)
Q Consensus       232 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  311 (414)
                      ++.+...++.+++.++.+++.||+++++.+.++.++.+++.+++.+..+.+...+..++.|++.+...+...   +...+
T Consensus       273 ~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~  349 (1146)
T PRK08633        273 YLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLN---ALIQF  349 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHH---HHHhh
Confidence            999999999999999999999999988888888888888777777776766666777778888777644433   34567


Q ss_pred             cccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-hchHHHHHHHHHHHHH
Q psy14075        312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-IGFEWMLFIIAILDFM  362 (414)
Q Consensus       312 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~~~~~~~~~~~~~~  362 (414)
                      ..|++.||+++|+.+++.++|..+++.+.+.+... .++...+.+.+.+.++
T Consensus       350 ~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  401 (1146)
T PRK08633        350 RAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI  401 (1146)
T ss_pred             cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence            78889999999999999999998888777665441 2344455554444433

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.97  E-value=6.7e-28  Score=229.63  Aligned_cols=354  Identities=14%  Similarity=0.143  Sum_probs=269.4

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS   97 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~   97 (414)
                      ++.+..|+|-+ ....|+.+...++.++..++.|+++|.||||.+++.+.++..+|.+.++-++|...++.+..+.|+|.
T Consensus        67 l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvga  145 (599)
T PF06609_consen   67 LPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGA  145 (599)
T ss_pred             HHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhh
Confidence            47788899886 57799999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy14075         98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK  177 (414)
Q Consensus        98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~  177 (414)
                      |..... ...++|..| .|.|....++.....-.....++.++..+..+.+|||.|++..+...+..++.+++..|++++
T Consensus       146 G~~~~~-~~~isEl~p-~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~  223 (599)
T PF06609_consen  146 GVQELA-ALAISELVP-NKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRA  223 (599)
T ss_pred             HHHHHH-HHHHHHhcc-cchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence            777654 566899999 599998888877776666678888887777777999999999998777666555444333211


Q ss_pred             C--CCC--Cc---------------------------------h----------------------------------hh
Q psy14075        178 Q--EVE--PP---------------------------------T----------------------------------LK  186 (414)
Q Consensus       178 ~--~~~--~~---------------------------------~----------------------------------~~  186 (414)
                      +  .++  ++                                 +                                  ..
T Consensus       224 ~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~  303 (599)
T PF06609_consen  224 QLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPH  303 (599)
T ss_pred             hhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCH
Confidence            1  000  00                                 0                                  12


Q ss_pred             hhccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc---chhhHhHHHHHHHHhhhhhhhhhhhhhhh-HHHH
Q psy14075        187 SLVMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW---QQGVSFLPASISYLIGTNLFGPLGHRMGR-YLAA  261 (414)
Q Consensus       187 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~  261 (414)
                      +++|++ .+....+..++....++....+.|......++-++.   ..++.....+++..++.++.+.+..+++| |+.+
T Consensus       304 ~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~l  383 (599)
T PF06609_consen  304 RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQL  383 (599)
T ss_pred             HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHH
Confidence            567764 455555666666667777778888888777776653   56788888899999999999999988877 4445


Q ss_pred             HHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075        262 LLGLLIIGICLMMIPLA--RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM  339 (414)
Q Consensus       262 ~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~  339 (414)
                      +++..++.+++..+...  ++....+...++.|++.|..........+   -..|++..|.+.|+..+.+.+|+.+|..+
T Consensus       384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~q---l~~p~~~ig~a~gL~~s~R~~GGsIg~aI  460 (599)
T PF06609_consen  384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQ---LIVPDEDIGTATGLTGSIRSIGGSIGYAI  460 (599)
T ss_pred             HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeE---eeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence            56766666654444432  34445567777888888876544443332   24556778999999999999999999998


Q ss_pred             HHHHHhh--------------------------------------------------------------hchHHHHHHHH
Q psy14075        340 SGTLVNT--------------------------------------------------------------IGFEWMLFIIA  357 (414)
Q Consensus       340 ~g~l~~~--------------------------------------------------------------~g~~~~~~~~~  357 (414)
                      ...+..+                                                              .+|+++|+...
T Consensus       461 y~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~si  540 (599)
T PF06609_consen  461 YNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSI  540 (599)
T ss_pred             HHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8776643                                                              34788888888


Q ss_pred             HHHHHHHHHHHHhcCCCchh
Q psy14075        358 ILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~  377 (414)
                      .+..++++..++++..++.-
T Consensus       541 aFG~vaiiaa~fl~d~~~~m  560 (599)
T PF06609_consen  541 AFGVVAIIAALFLGDIDKYM  560 (599)
T ss_pred             HHHHHHHHHHHHcCChHHhh
Confidence            88888888888887655443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.97  E-value=9.2e-28  Score=230.23  Aligned_cols=350  Identities=13%  Similarity=0.119  Sum_probs=262.4

Q ss_pred             chhhh-hh--hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075         18 RENRH-KY--LMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ   93 (414)
Q Consensus        18 ~~~~~-~~--~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~   93 (414)
                      +|.+. ++  +|.+..+.|++.+.+.+++.++++++|+++|| +||||++.++.++.+++.++.+++++++.+++.|++.
T Consensus        33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~  112 (475)
T TIGR00924        33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTI  112 (475)
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHH
Confidence            34453 44  89999999999999999999999999999999 8999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcc---hhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDR---ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLL  170 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~---~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~  170 (414)
                      |+|.|...+...++++|++|+ +   +|++++++++.+.++|..+||.+++++.+++|||+.|.+.++..++..+.....
T Consensus       113 g~g~g~~~~~~~~~~a~~~~~-~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~  191 (475)
T TIGR00924       113 AVGSGLFKANPSSMVGKLYER-GDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAG  191 (475)
T ss_pred             HhccccccCCHHHHHHHhcCC-CCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999984 4   488899999999999999999999999998999999999886555544333332


Q ss_pred             ccC---CCCCCC---CCCchh---------------------------------------------------hhhccCh-
Q psy14075        171 LQP---GVVKQE---VEPPTL---------------------------------------------------KSLVMDP-  192 (414)
Q Consensus       171 ~~~---~~~~~~---~~~~~~---------------------------------------------------~~~~~~~-  192 (414)
                      .++   .+++++   +++.+.                                                   .+.-|+| 
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (475)
T TIGR00924       192 RHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKM  271 (475)
T ss_pred             ccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHH
Confidence            211   111110   000000                                                   0000111 


Q ss_pred             -HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc----hhhHhHHHHHHHHhhhhhhhhhhhhhhh-----HHH--
Q psy14075        193 -YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ----QGVSFLPASISYLIGTNLFGPLGHRMGR-----YLA--  260 (414)
Q Consensus       193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~g~l~d~~~~-----~~~--  260 (414)
                       .+..+.+...+.+..+....+.++.+.++..+.+...    .+++.+...+..++..++..++-.|.+|     +..  
T Consensus       272 ~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k  351 (475)
T TIGR00924       272 YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK  351 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH
Confidence             2333445555666777777777888877754443222    5678888888888877765544333333     222  


Q ss_pred             HHHHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHH
Q psy14075        261 ALLGLLIIGICLMMIPL---------ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCL  331 (414)
Q Consensus       261 ~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~  331 (414)
                      +.+|.++.+++++.+.+         ..+.+..+...++.+++.....|....   ...+..|++.||+.+|+......+
T Consensus       352 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~---~~~~~aP~~~~g~~~g~~~l~~~~  428 (475)
T TIGR00924       352 FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLS---WWTKIAPQRLMGQMLGMWFLAQAM  428 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH---HHHHhCCHHHHHHHHHHHHHHHHH
Confidence            36788888887776654         346777788888999999988666554   466888899999999999999999


Q ss_pred             HHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        332 GFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       332 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      |..+++.+.....+..++...|...++.+++..++.++..
T Consensus       429 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  468 (475)
T TIGR00924       429 GSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV  468 (475)
T ss_pred             HHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988887777888888877777776666655443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.97  E-value=2.9e-27  Score=222.63  Aligned_cols=346  Identities=16%  Similarity=0.140  Sum_probs=251.8

Q ss_pred             ccchhhhhhhcCCcchHHHH--HHHHHHHHHHhhhHHHH-hhcccCCchhHHHHHHH-HHHHHHHHH---hhhh-HHHHH
Q psy14075         16 VARENRHKYLMGETKAVGVM--FGSKAFVQLLANPLVGI-LTHRVGYSLPMFTGFVI-MFLSTLIFA---FGRT-YGVLF   87 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~--~s~~~~~~~~~~~~~G~-l~dr~Grr~~l~~~~~~-~~~~~~~~~---~~~~-~~~l~   87 (414)
                      +..|.+.+|.|.|++++|++  .+...+...+.+|++++ ..||+||||..++...+ .+......+   ...+ ...++
T Consensus        22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (390)
T TIGR02718        22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV  101 (390)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence            35688889999999999997  46778888889999955 79999999997555533 222222222   2222 33444


Q ss_pred             HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHH
Q psy14075         88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQ  167 (414)
Q Consensus        88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~  167 (414)
                      ..-++.++..+...+...++..|..+ +++++...+....+..+|..+|+.+.+++.+++|||.+|++.+++.++..+..
T Consensus       102 ~~~~~~~~~~a~~d~~~d~~~~~~~~-~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~  180 (390)
T TIGR02718       102 GLLACASLASATQDIATDGMAAEHFN-GRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV  180 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC-HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence            45566667778888888888889888 48889899999999999999999999999999999999999999888777766


Q ss_pred             HHhccCCCCCCC---CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHH-HHHh
Q psy14075        168 LLLLQPGVVKQE---VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASI-SYLI  243 (414)
Q Consensus       168 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~  243 (414)
                      ++..|+++++++   ++..+.++.+|+|.++......++..........+.+.|++| .|+++.+.|......+. ..++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~  259 (390)
T TIGR02718       181 LWLKDRAVASPEAPLARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLL  259 (390)
T ss_pred             HHcCCCCcCccccchhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHH
Confidence            655554332211   122346688899988877777777777777778888999988 69999999998887764 6667


Q ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-h-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccc-c
Q psy14075        244 GTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL-A-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHT-A  316 (414)
Q Consensus       244 ~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~  316 (414)
                      +.++.|++.||+++|+.+..+..+.++..+.... .     ++.........+.+++.+...+...+.   ..+..++ +
T Consensus       260 g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~  336 (390)
T TIGR02718       260 GCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTA---FMRFAGDGD  336 (390)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCccc
Confidence            7899999999999999888776655333222211 1     112222222333344455554434433   3333444 7


Q ss_pred             chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075        317 VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       317 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  366 (414)
                      .+++.++..+...++|..++|.+.|.+.|..|++..|...+++.+++...
T Consensus       337 ~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       337 QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999998887776665443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.96  E-value=2.7e-27  Score=227.01  Aligned_cols=350  Identities=11%  Similarity=0.098  Sum_probs=247.1

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhh
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGV-LFLARSLQGIG   96 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~   96 (414)
                      ..+.+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++.++++++++... ++++|+++|+|
T Consensus        39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig  118 (489)
T PRK10207         39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG  118 (489)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence            34567899999999999999998888889999999999 99999999999999999999999876554 55899999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcc-hhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc---
Q psy14075         97 SSCSSVSGMGMLAERYPDDR-ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ---  172 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~-~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~---  172 (414)
                      .|...|...+++.|++|+++ +|+++++++..+.++|..+||.+++++.+++|||+.|++.++. ++..++.+...+   
T Consensus       119 ~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~~~~  197 (489)
T PRK10207        119 NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACRGMV  197 (489)
T ss_pred             cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcchhh
Confidence            99999999999999998522 4588999999999999999999999999999999999986553 333333332222   


Q ss_pred             -CCCCCCCCCCchh-------------------------------------------------hhhccChHHHHHH--HH
Q psy14075        173 -PGVVKQEVEPPTL-------------------------------------------------KSLVMDPYILIAA--GA  200 (414)
Q Consensus       173 -~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~--~~  200 (414)
                       +.+++.++++.+.                                                 .+.+|+|.+....  +.
T Consensus       198 ~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~  277 (489)
T PRK10207        198 KDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLE  277 (489)
T ss_pred             cccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence             1100000000000                                                 0122333333222  22


Q ss_pred             HHHHHHHHHhhhhchHHHHHHHhCCCc----cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHH-------HHHHHHHHHH
Q psy14075        201 ITFANTGIAMLEPSLPIWMMDTMGADK----WQQGVSFLPASISYLIGTNLFGPLGHRMGRYL-------AALLGLLIIG  269 (414)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~-------~~~~~~~~~~  269 (414)
                      ..+.+..+......++.+.++..+.+.    .....+.....+..++..++.+++.||+++|+       .+.+|+++.+
T Consensus       278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~  357 (489)
T PRK10207        278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCS  357 (489)
T ss_pred             HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHH
Confidence            344555566666778888875333221    01233444455667677788899999998875       3566777777


Q ss_pred             HHHHHhh-----hh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075        270 ICLMMIP-----LA-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM  339 (414)
Q Consensus       270 i~~~~~~-----~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~  339 (414)
                      ++++.+.     ..     .+.+......++.|++.++..+...   ....+..|++.+|.++|+.+...++|+.++..+
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~---~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l  434 (489)
T PRK10207        358 LGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGL---AMIAALVPQHLMGFILGMWFLTQAAAFLLGGYV  434 (489)
T ss_pred             HHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHH---HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6654321     11     2345556677888899888865544   346677889999999999999999999999888


Q ss_pred             HHHHHh----------hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        340 SGTLVN----------TIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       340 ~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ......          ...+.+.|...++..++..++.+...+
T Consensus       435 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~  477 (489)
T PRK10207        435 ATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP  477 (489)
T ss_pred             HHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            765521          112567777777666666665555443

>KOG0569|consensus

Probab=99.96  E-value=1.9e-26  Score=214.42  Aligned_cols=342  Identities=16%  Similarity=0.147  Sum_probs=258.2

Q ss_pred             hHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHhhhhhhhhhhHHHH
Q psy14075         31 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF---GRTYGVLFLARSLQGIGSSCSSVSGMGM  107 (414)
Q Consensus        31 ~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~  107 (414)
                      ..+.+.+++.+|.++++...|.++||+|||..+.++.++..++.++..+   .+++++++++|++.|+..|.......-+
T Consensus        61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy  140 (485)
T KOG0569|consen   61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY  140 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            3477789999999999999999999999999999999888888777665   5789999999999999999999999999


Q ss_pred             HhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhh--HhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC----C----
Q psy14075        108 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGG--IMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV----K----  177 (414)
Q Consensus       108 i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~--~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~----~----  177 (414)
                      +.|..| ++.||..-...+.+..+|.+++..++.  .+-+.-.|++.+....+++++..++..+.++.++.    +    
T Consensus       141 l~E~sP-~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~  219 (485)
T KOG0569|consen  141 LTEISP-KNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEE  219 (485)
T ss_pred             HhhcCh-hhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHH
Confidence            999999 599999999999999999999977762  23344569999999999888877776665543220    0    


Q ss_pred             -------------------------------CCCCCchhhhhccChHHHHH-----HHHHHHHHHHHHhhhhchHHHHHH
Q psy14075        178 -------------------------------QEVEPPTLKSLVMDPYILIA-----AGAITFANTGIAMLEPSLPIWMMD  221 (414)
Q Consensus       178 -------------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  221 (414)
                                                     +++++.+++++++||.....     .+.......+.+....|...++++
T Consensus       220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~  299 (485)
T KOG0569|consen  220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT  299 (485)
T ss_pred             HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence                                           00122356678887654432     222222334444555566666665


Q ss_pred             HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh---h-h--HH---HHHHHHHHH
Q psy14075        222 TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR---N-I--NH---LIVPNAGLG  292 (414)
Q Consensus       222 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~-~--~~---~~~~~~~~g  292 (414)
                       .|++..++.+.....++...+..+++.++.||.|||++++.+..++.+..+++....   + .  |.   .+.+.+++.
T Consensus       300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~  378 (485)
T KOG0569|consen  300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI  378 (485)
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence             599999999999999999999999999999999999999999999988877665421   1 1  11   123344444


Q ss_pred             HHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH-hc
Q psy14075        293 FAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL-LR  371 (414)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~  371 (414)
                      ++++.......  .-...|.+|++.|..+.+.......+..++-...+..+.+..|- ..|....+.+++..+..+. ++
T Consensus       379 ~~f~~G~gpi~--~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP  455 (485)
T KOG0569|consen  379 ISFAIGPGPIP--WFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP  455 (485)
T ss_pred             HhhhcCCCchh--HHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence            44444433222  23477999999999999999999999999999999999999996 5666666666665555544 44


Q ss_pred             CCCchh
Q psy14075        372 NPPTKE  377 (414)
Q Consensus       372 ~~~~~~  377 (414)
                      +.+.|.
T Consensus       456 ETkgr~  461 (485)
T KOG0569|consen  456 ETKGRT  461 (485)
T ss_pred             ccCCCC
Confidence            444443

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.96  E-value=8.5e-27  Score=213.59  Aligned_cols=317  Identities=13%  Similarity=0.047  Sum_probs=237.7

Q ss_pred             ccchhhhhhhcCCcch-HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075         16 VARENRHKYLMGETKA-VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~-~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G   94 (414)
                      ++.|.+.+|+|+|++| .|.+.+.++.+|++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|
T Consensus        47 ~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llG  126 (511)
T TIGR00806        47 FITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYS  126 (511)
T ss_pred             HHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567888999999999 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHH---HHHHHHHHHHHHHhc
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLIL---SALALGDGLLQLLLL  171 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~---~~~~~~~~~~~~~~~  171 (414)
                      ++.|... +...++.+|+| +++|+++.++...+..+|.+++++++++ ...+|||+-+...   .....++.++.++++
T Consensus       127 vaEA~~~-A~~syI~~WfP-~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP  203 (511)
T TIGR00806       127 VTMAARI-AYSSYIFSLVP-PSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLK  203 (511)
T ss_pred             HHHHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999 88999999999 5999999999999999999999999999 5568999754433   233333344444443


Q ss_pred             cCCC------CC-----------CC-CC----C----------------chhhhhccChHHHHHHHHHHHHHHHHHhhhh
Q psy14075        172 QPGV------VK-----------QE-VE----P----------------PTLKSLVMDPYILIAAGAITFANTGIAMLEP  213 (414)
Q Consensus       172 ~~~~------~~-----------~~-~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (414)
                      ++++      ++           .. ++    .                .++++..+||.+..-.+-..+...++..+.+
T Consensus       204 ~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~  283 (511)
T TIGR00806       204 RPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITY  283 (511)
T ss_pred             CCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHH
Confidence            2211      00           00 00    0                0122345677777666777777788887777


Q ss_pred             chHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh--HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q psy14075        214 SLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR--YLAALLGLLIIGICLMMIPLARNINHLIVPNAGL  291 (414)
Q Consensus       214 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  291 (414)
                      +.....++.-+-++.-.|..-++..+.+.+..+..|++-.++.+  ...+.+..++.+..++++.+.++.|..++.-+++
T Consensus       284 Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf  363 (511)
T TIGR00806       284 YVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLF  363 (511)
T ss_pred             HHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHH
Confidence            77766655433222245666677777788888888888665544  2344445566666677788889999999988888


Q ss_pred             HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHH
Q psy14075        292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPA  338 (414)
Q Consensus       292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~  338 (414)
                      +..+.+..+....   .++.....+..|..+|+.++..-+-..+-..
T Consensus       364 ~~~y~flitia~~---~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~  407 (511)
T TIGR00806       364 RGIYQFLVPIATF---QIASSLSKELCALVFGINTFVATALKTIITA  407 (511)
T ss_pred             HHHHHHHHHHHHH---HHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence            8888877544333   3555556677799999987766555544443

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.96  E-value=2.6e-27  Score=233.26  Aligned_cols=256  Identities=15%  Similarity=0.186  Sum_probs=214.9

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh--------------
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--------------   81 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--------------   81 (414)
                      ..++.++++++++.++.|++.+.+.++++++.++.|++.||+||||.+.++.++++++++++++.+              
T Consensus        54 ~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~  133 (633)
T TIGR00805        54 SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSS  133 (633)
T ss_pred             hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccc
Confidence            456889999999999999999999999999999999999999999999999999999999998763              


Q ss_pred             -------------------------------------hHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHH
Q psy14075         82 -------------------------------------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGI  124 (414)
Q Consensus        82 -------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~  124 (414)
                                                           .+..++++|+++|+|.+..++...+++.|++|+ ++|++++++
T Consensus       134 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~-~~~~~~~~i  212 (633)
T TIGR00805       134 TGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS-KNSPLYIGI  212 (633)
T ss_pred             cccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc-cccHHHHHH
Confidence                                                 245678999999999999999999999999995 999999999


Q ss_pred             HHHHHhhhhhhchhhhhHhhhhc----------------------CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC---
Q psy14075        125 ALGGLALGVLIGPPFGGIMYQFV----------------------GKTAPFLILSALALGDGLLQLLLLQPGVVKQE---  179 (414)
Q Consensus       125 ~~~~~~~g~~ig~~l~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---  179 (414)
                      ++....+|..+|+++++.+.+.+                      +|+..|++.+++.++..++.++++++.+++++   
T Consensus       213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~  292 (633)
T TIGR00805       213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN  292 (633)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc
Confidence            99999999999999999988643                      27778988888888877665555433221100   


Q ss_pred             ------------CC-------------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh
Q psy14075        180 ------------VE-------------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF  234 (414)
Q Consensus       180 ------------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  234 (414)
                                  ++             ....+++++||.++...+..++.......+.+++|.|+++++|+++.+++++.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~  372 (633)
T TIGR00805       293 VDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLI  372 (633)
T ss_pred             hhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHh
Confidence                        00             01245678999999999999999999999999999999999999999999998


Q ss_pred             HHHHH-HHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHH
Q psy14075        235 LPASI-SYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICL  272 (414)
Q Consensus       235 ~~~~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~  272 (414)
                      ....+ +.+++.++.|+++||++  .|+.+..+.+...++.
T Consensus       373 ~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~  413 (633)
T TIGR00805       373 GVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY  413 (633)
T ss_pred             hhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence            87776 56889999999999987  4566666665555553

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK09669 putative symporter YagG; Provisional

Probab=99.96  E-value=7.7e-26  Score=216.39  Aligned_cols=331  Identities=15%  Similarity=0.079  Sum_probs=240.7

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCc-hhHHHHHHHHHHHHHHHHhhhh------HHHH
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYS-LPMFTGFVIMFLSTLIFAFGRT------YGVL   86 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l   86 (414)
                      .+.+.+++|+|+.++|.+.++..+..++..|+.|.++||    +||| +.++.+.+..+++..+....++      ++.+
T Consensus        33 ~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~  112 (444)
T PRK09669         33 AYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYA  112 (444)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence            456678899999999999999999999999999999999    7875 5566787888877766555543      4566


Q ss_pred             HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCChhHHHHHHHH
Q psy14075         87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKTAPFLILSAL  159 (414)
Q Consensus        87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f~~~~~~  159 (414)
                      ++..++.+.+......+..++.+|+.++.++|++..++......+|..+++.+...+..       ..+|+..+.+.+++
T Consensus       113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii  192 (444)
T PRK09669        113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLL  192 (444)
T ss_pred             HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence            66777778777777777889999998655889999999998888888888765544433       24688888888888


Q ss_pred             HHHHHHHHHHhccCCCCCCCCC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH
Q psy14075        160 ALGDGLLQLLLLQPGVVKQEVE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL  235 (414)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~  235 (414)
                      .++..+..++..+|++++++++    .++.++++|||.++......++............+.|.++..+. +...+.+..
T Consensus       193 ~~v~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~  271 (444)
T PRK09669        193 GVVLFFCCFFMTKERYTPEVDNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLV  271 (444)
T ss_pred             HHHHHHHHhCCeEEecCCCCcCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHH
Confidence            7777666665555442221111    23467788999988877766666555554444444444444432 333444555


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075        236 PASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR  313 (414)
Q Consensus       236 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  313 (414)
                      ...+..+++.++.+++.||+|+|+....+..+..+..+.+.+  .++.+...+..++.|++.+...+...+..++..|..
T Consensus       272 ~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~  351 (444)
T PRK09669        272 TGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE  351 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            566778888889999999999999888777665543332222  235555666777889999888877777776666532


Q ss_pred             ----cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075        314 ----HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF  349 (414)
Q Consensus       314 ----~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~  349 (414)
                          .++..|..+|..+....+|.++|+.+.|.+.+..||
T Consensus       352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy  391 (444)
T PRK09669        352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY  391 (444)
T ss_pred             hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence                233457888999999999999999999999998776

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.95  E-value=3.7e-25  Score=213.48  Aligned_cols=349  Identities=12%  Similarity=0.128  Sum_probs=233.8

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhh
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIG   96 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~   96 (414)
                      +.+.+++|.+.++.+++.+.+........+++|+++|| +|||+.+..+.++.+++..++++++ +.+.+++.|+++|++
T Consensus        46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig  125 (500)
T PRK09584         46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG  125 (500)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence            34468899999999999888877767777899999999 5999999999999999999998874 566777889999999


Q ss_pred             hhhhhhhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHH---HHHHhcc
Q psy14075         97 SSCSSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGL---LQLLLLQ  172 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~---~~~~~~~  172 (414)
                      .|...+...+++.|++|++ ++|..++++++.+.++|..++|.+++++.+++|||+.|++.++..++..+   ......+
T Consensus       126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~  205 (500)
T PRK09584        126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVK  205 (500)
T ss_pred             hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence            9999999889999999742 23556889999999999999999999999999999999998765444332   2222333


Q ss_pred             CCCCCCCCCCchhh-------------------------------------------hhcc-----ChHHHHHHHHHHHH
Q psy14075        173 PGVVKQEVEPPTLK-------------------------------------------SLVM-----DPYILIAAGAITFA  204 (414)
Q Consensus       173 ~~~~~~~~~~~~~~-------------------------------------------~~~~-----~~~~~~~~~~~~~~  204 (414)
                      +..++.+.++.+..                                           +..+     +++.+.. +..++.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  284 (500)
T PRK09584        206 QYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAARRKMIVA-FILMLE  284 (500)
T ss_pred             cCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHHH
Confidence            32111110000000                                           0000     1122222 222233


Q ss_pred             HHHHHhhhhchHHHHHH--HhCCCc------cchhhHhHHHHHHHHhhhhhh----hhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075        205 NTGIAMLEPSLPIWMMD--TMGADK------WQQGVSFLPASISYLIGTNLF----GPLGHRMGRYLAALLGLLIIGICL  272 (414)
Q Consensus       205 ~~~~~~~~~~~~~~~~~--~~g~~~------~~~g~~~~~~~~~~~~~~~~~----g~l~d~~~~~~~~~~~~~~~~i~~  272 (414)
                      ...++......|.++..  ..+.+.      ...+++.+...+..++..++.    +++.+|.+..+.+.+++++.++++
T Consensus       285 ~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f  364 (500)
T PRK09584        285 AIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAF  364 (500)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHH
Confidence            34444444445554432  111121      124556666666666665555    555555556677888999999998


Q ss_pred             HHhhhhhh---------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075        273 MMIPLARN---------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL  343 (414)
Q Consensus       273 ~~~~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l  343 (414)
                      +.+....+         .+......++.+++..+..|.....   +.+..|++.||+.+|.......+|..++..+.+..
T Consensus       365 ~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~---~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~  441 (500)
T PRK09584        365 LVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAM---VAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLM  441 (500)
T ss_pred             HHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH---HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            88776544         3456677888899998887665544   66778899999999977655555555555554322


Q ss_pred             Hh----------hhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        344 VN----------TIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       344 ~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ..          ..++.+.|...++..++..++.+...
T Consensus       442 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~  479 (500)
T PRK09584        442 AVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTA  479 (500)
T ss_pred             ccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            10          12367888777776665554444433

>KOG2615|consensus

Probab=99.95  E-value=3.4e-26  Score=200.05  Aligned_cols=315  Identities=22%  Similarity=0.263  Sum_probs=230.3

Q ss_pred             CCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075         27 GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMG  106 (414)
Q Consensus        27 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~  106 (414)
                      .+..-.|.+.+.+++.+.+.++.+|.++||+|||+++.++.+..++..++.+.++|+..+.++|++.|+..|...+. .+
T Consensus        65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~-rA  143 (451)
T KOG2615|consen   65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVI-RA  143 (451)
T ss_pred             ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH-HH
Confidence            35567799999999999999999999999999999999999999999999999999977777799999999877665 79


Q ss_pred             HHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh---hcCChhHH---HHHHHHHHHHHHHHHHhccCCCCCCCC
Q psy14075        107 MLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ---FVGKTAPF---LILSALALGDGLLQLLLLQPGVVKQEV  180 (414)
Q Consensus       107 ~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~---~~gw~~~f---~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (414)
                      +++|.+++ |+|+++++.+...+++|.++||.+|+++..   ..|--+-+   ++..+..........++.||+-+.+++
T Consensus       144 iisdV~se-k~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~  222 (451)
T KOG2615|consen  144 IISDVVSE-KYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR  222 (451)
T ss_pred             HHHhhcCh-hhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence            99999995 999999999999999999999999999987   22211111   222222222122223344443222211


Q ss_pred             C--Cch-------------hh-----hhccChHH-------HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhH
Q psy14075        181 E--PPT-------------LK-----SLVMDPYI-------LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVS  233 (414)
Q Consensus       181 ~--~~~-------------~~-----~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  233 (414)
                      +  +.+             ..     ...||+..       ....+..+.+...+..+....+.+..+.+|+++.+.|.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v  302 (451)
T KOG2615|consen  223 NDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV  302 (451)
T ss_pred             cccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence            1  000             00     12344321       123344455555555565566665567799999999999


Q ss_pred             hHHHHHHHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075        234 FLPASISYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD  311 (414)
Q Consensus       234 ~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  311 (414)
                      ++..++.+.+.+....+..||.+  .+-.+..+..++.-.++++........+.....+..+......+....+   ...
T Consensus       303 l~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~L---v~~  379 (451)
T KOG2615|consen  303 LSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSL---VHK  379 (451)
T ss_pred             eehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHH---HHh
Confidence            99999999998888888888876  5556666666666666677776666666666666666655554333332   446


Q ss_pred             cccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075        312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT  346 (414)
Q Consensus       312 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~  346 (414)
                      ..|+++||+++|+..+...++.++||.+.|.+..+
T Consensus       380 ~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W  414 (451)
T KOG2615|consen  380 YGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW  414 (451)
T ss_pred             cCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence            67789999999999999999999999999987764

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.95  E-value=2.9e-25  Score=213.71  Aligned_cols=330  Identities=13%  Similarity=0.094  Sum_probs=238.2

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc----ccCC-chhHHHHHHHHHHHHHHHHhhhh------HHHHH
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGY-SLPMFTGFVIMFLSTLIFAFGRT------YGVLF   87 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~l~   87 (414)
                      ..+.+.+|+++.++|.+..+..+..++..|++|.++|    |+|| |+.++++.+..+++..++...++      +..++
T Consensus        31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~  110 (473)
T PRK10429         31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC  110 (473)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence            4456677999999999999999999999999999999    6698 55677788888888766644331      34566


Q ss_pred             HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-------cCChhHHHHHHHHH
Q psy14075         88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-------VGKTAPFLILSALA  160 (414)
Q Consensus        88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-------~gw~~~f~~~~~~~  160 (414)
                      +..++.+++.....++..++..|..++.++|.+..++...+.++|..+.+.+...+.+.       .+|+....+.+++.
T Consensus       111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~  190 (473)
T PRK10429        111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF  190 (473)
T ss_pred             HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence            66777888888888888999999995458999999998888888766665554433222       24677777777776


Q ss_pred             HHHHHHHHHhccCCCCC-----CCCCCc----hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchh
Q psy14075        161 LGDGLLQLLLLQPGVVK-----QEVEPP----TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQG  231 (414)
Q Consensus       161 ~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g  231 (414)
                      ++..+..++..+|++++     +++++.    .++.+++||.++......++.+........+.+.|.+...+ ++...+
T Consensus       191 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~  269 (473)
T PRK10429        191 IVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFP  269 (473)
T ss_pred             HHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHH
Confidence            66666666555554211     111112    23456689988888777777777766666666666655444 455566


Q ss_pred             hHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy14075        232 VSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPEL  306 (414)
Q Consensus       232 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  306 (414)
                      .+.....++.+++.++.+++.||+|+|+.+..+..+..++.+.+..     ..+.+...+..++.+++.+...+...+..
T Consensus       270 ~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~  349 (473)
T PRK10429        270 YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMV  349 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6777777888999999999999999999988777766655444322     23344555566677788887776666666


Q ss_pred             hhhhhcc----cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075        307 GYLVDIR----HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF  349 (414)
Q Consensus       307 ~~~~~~~----~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~  349 (414)
                      ++..|..    .++..|..+|..+....++..+++.+.|++.+..||
T Consensus       350 ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy  396 (473)
T PRK10429        350 ADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY  396 (473)
T ss_pred             hhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            6665532    233447789999999999999999999999987776

>PTZ00207 hypothetical protein; Provisional

Probab=99.95  E-value=9.9e-25  Score=209.46  Aligned_cols=351  Identities=13%  Similarity=0.059  Sum_probs=254.8

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh------hhHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG------RTYGVLFLAR   90 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l~~~r   90 (414)
                      ..|++++++|.|.++++++.+.. .....++++.|++.||+|||+++.++.+++.+++++++++      ++++.+.+.|
T Consensus        49 ~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r  127 (591)
T PTZ00207         49 ISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYN  127 (591)
T ss_pred             HHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHH
Confidence            45788999999999999998874 4556788899999999999999999999999999999997      6899999999


Q ss_pred             HHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075         91 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLL  170 (414)
Q Consensus        91 ~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~  170 (414)
                      ++.|+|.+...+.....+.+|+|  ++||++.|+...+.++|..+.+.+...+.. .+|+..|++.+++.++..++.+.+
T Consensus       128 ~l~G~G~~~~~~~~~~~i~~~Fp--~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~  204 (591)
T PTZ00207        128 GLMTLGCMLFDLGAVVTVLSVFP--SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVF  204 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999998999999996  689999999999999999865444444433 367888888888777766666555


Q ss_pred             ccCCCCCC----C---CC--------------------------------------------------------------
Q psy14075        171 LQPGVVKQ----E---VE--------------------------------------------------------------  181 (414)
Q Consensus       171 ~~~~~~~~----~---~~--------------------------------------------------------------  181 (414)
                      .++++.+.    +   ++                                                              
T Consensus       205 vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~  284 (591)
T PTZ00207        205 MRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVI  284 (591)
T ss_pred             eeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence            43322100    0   00                                                              


Q ss_pred             ----------------------------------------------------------CchhhhhccChHHHHHHHHHHH
Q psy14075        182 ----------------------------------------------------------PPTLKSLVMDPYILIAAGAITF  203 (414)
Q Consensus       182 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~  203 (414)
                                                                                ..++++.+++..+|++.+..++
T Consensus       285 ~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~c  364 (591)
T PTZ00207        285 VLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFC  364 (591)
T ss_pred             HHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHH
Confidence                                                                      0011222334567777777777


Q ss_pred             HHHHHHhhhhchHHHHHHHhCCCccc--hhhHhHHHHHHHHhhhhhhhhhhhhhhhH---------HHHHHHHHHHHHHH
Q psy14075        204 ANTGIAMLEPSLPIWMMDTMGADKWQ--QGVSFLPASISYLIGTNLFGPLGHRMGRY---------LAALLGLLIIGICL  272 (414)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~g~~~~~--~g~~~~~~~~~~~~~~~~~g~l~d~~~~~---------~~~~~~~~~~~i~~  272 (414)
                      ...........+.+..+..-|.+...  ...+.++.++.+.+|++..|.+.....+|         ..+.+..+ +.++.
T Consensus       365 g~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~  443 (591)
T PTZ00207        365 CVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITM  443 (591)
T ss_pred             hhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHH
Confidence            77666666677777666632663322  33378899999999999999987322222         22333344 55555


Q ss_pred             HHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHH-HHHHHHHHhhh----
Q psy14075        273 MMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIG-PAMSGTLVNTI----  347 (414)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig-~~~~g~l~~~~----  347 (414)
                      +++.+......+++..++.|+++|..++...+.   ..|.+. +..|+-+-+.....-+|..+- -.++|.++|.-    
T Consensus       444 lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i---~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~  519 (591)
T PTZ00207        444 LTLFLTLPKAALPLPYFIAAFANGFMAATIALV---TRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL  519 (591)
T ss_pred             HHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHH---HHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            555544332567888999999999997766655   567777 666888887777666776655 56778888752    


Q ss_pred             ------c---hHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        348 ------G---FEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       348 ------g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                            |   ++..|.+.+++++.+.+....+..+.++
T Consensus       520 ~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~  557 (591)
T PTZ00207        520 GQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRR  557 (591)
T ss_pred             CCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHH
Confidence                  2   6789999999999988887766554443

>PRK09848 glucuronide transporter; Provisional

Probab=99.95  E-value=9.4e-25  Score=209.24  Aligned_cols=331  Identities=13%  Similarity=0.092  Sum_probs=228.8

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc----CCchhH-HHHHHHHHHHHHHH-Hhh----h--hHHHH
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV----GYSLPM-FTGFVIMFLSTLIF-AFG----R--TYGVL   86 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~----Grr~~l-~~~~~~~~~~~~~~-~~~----~--~~~~l   86 (414)
                      +.+.+.+|+++.++|.+.+...+..++..|+.|+++||.    ||||.. .++.+...+...+. ...    +  ..+..
T Consensus        33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (448)
T PRK09848         33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA  112 (448)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence            456677899999999999999999999999999999996    777654 55655555444443 221    1  22334


Q ss_pred             HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHh-----hhhhhchhhhhHhhhhc--CChhHHHHHHHH
Q psy14075         87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLA-----LGVLIGPPFGGIMYQFV--GKTAPFLILSAL  159 (414)
Q Consensus        87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~-----~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~  159 (414)
                      ++..++.+++.+...++..++..+..++.++|.+..+....+.+     ++..++|.++.......  +|.....+.+++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~  192 (448)
T PRK09848        113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIA  192 (448)
T ss_pred             HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence            55567788888888888888888777655789888777665433     44555555554321110  121111233333


Q ss_pred             HHHHHHHHHHhccCCCCCCCCC---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHH
Q psy14075        160 ALGDGLLQLLLLQPGVVKQEVE---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLP  236 (414)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~  236 (414)
                      .++..+......+|+.++++++   ...+++++|||.++...+..++....+.......|.|+++.+|.++...++....
T Consensus       193 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  272 (448)
T PRK09848        193 GMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQ  272 (448)
T ss_pred             HHHHHHHHHcCcEeccCCCccCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHH
Confidence            3333333343344443222222   1235678999999988888888888777877788888888888877655555555


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-
Q psy14075        237 ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-  313 (414)
Q Consensus       237 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-  313 (414)
                      ..++.+++.++.+++.||+++|+.+..+.++..++.+.+.+.+  +.+......++.+++.+...+...+...+..|.. 
T Consensus       273 ~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~  352 (448)
T PRK09848        273 NLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGE  352 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence            5677888899999999999999999999888888776666543  3444455567778888888776666655554422 


Q ss_pred             ---cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075        314 ---HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF  349 (414)
Q Consensus       314 ---~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~  349 (414)
                         +++..|..+|+.+....+|..+++.+.|.+.+..||
T Consensus       353 ~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~  391 (448)
T PRK09848        353 YLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY  391 (448)
T ss_pred             HhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence               234569999999999999999999999999887665

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.94  E-value=4.2e-24  Score=198.81  Aligned_cols=349  Identities=16%  Similarity=0.197  Sum_probs=260.9

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-CchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-YSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      .|.+-++.|.|..|+|.+.+...+...++++++|.++||++ +||.+.+..++.++........++++.+++.-++..+.
T Consensus        25 ~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~  104 (400)
T PF03825_consen   25 LPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFF  104 (400)
T ss_pred             HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            46677889999999999999999999999999999999986 57888888888888777778888999998888888888


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhh-hhHhhhhcCC---hhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF-GGIMYQFVGK---TAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l-~~~l~~~~gw---~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      .....|...++.-+..   +++++-.|......++|.+++... ++.+....++   ...+++.+...++.....+..++
T Consensus       105 ~~p~~pl~dsi~~~~~---~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~  181 (400)
T PF03825_consen  105 FSPTMPLSDSIALSYL---GDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPK  181 (400)
T ss_pred             HccHHHHHHHHHHHHc---ccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCC
Confidence            8888888888888876   346677788888888888877654 2333333333   34566666555444443343333


Q ss_pred             CCCCCC-CC--C---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075        173 PGVVKQ-EV--E---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN  246 (414)
Q Consensus       173 ~~~~~~-~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~  246 (414)
                      .+++++ ++  +   ..+..+++|+|++....+..++..........+.+.|+++..|.+....+...++..++.++.-.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~  261 (400)
T PF03825_consen  182 TPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFF  261 (400)
T ss_pred             CccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHH
Confidence            221111 11  1   12334789999999888888888888888999999999986447777888888888899999999


Q ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHH----HHHHHHHHhhhhhhhhhhhhhhhcccccchhhH
Q psy14075        247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLA-RNINHLIVPN----AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV  321 (414)
Q Consensus       247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  321 (414)
                      ..+++.+|+|.++++.++.+..++=..++... ++.+......    .+-|+.++...   .+...++.+..|++.|+++
T Consensus       262 ~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~---~a~~~yi~~~~p~~~~at~  338 (400)
T PF03825_consen  262 FSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH---AASVRYIDRIAPPELRATA  338 (400)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHhCCccchHHH
Confidence            99999999999999999999999888887776 4433333333    34677777663   3444567788999999999


Q ss_pred             HhHHHHH-HHHHHhHHHHHHHHHHhhhchHH------HHHHHHHHHHHHHHHHHHhcC
Q psy14075        322 YAIGDVA-FCLGFAIGPAMSGTLVNTIGFEW------MLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       322 ~g~~~~~-~~~g~~ig~~~~g~l~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      .++++.. ..+|..+|..++|+++|++|.+.      .+.+.+++.++..++..++.|
T Consensus       339 Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk  396 (400)
T PF03825_consen  339 QGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK  396 (400)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9998765 57999999999999999988554      344444444444444444433

>KOG0254|consensus

Probab=99.94  E-value=1.2e-24  Score=211.26  Aligned_cols=342  Identities=15%  Similarity=0.119  Sum_probs=246.1

Q ss_pred             chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHh
Q psy14075         30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA  109 (414)
Q Consensus        30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~  109 (414)
                      ++.+++.+...++..+++++.|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|........+++
T Consensus        89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s  168 (513)
T KOG0254|consen   89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS  168 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence            45699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHHHHHhccCCCCCC----------
Q psy14075        110 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLLQLLLLQPGVVKQ----------  178 (414)
Q Consensus       110 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----------  178 (414)
                      |..|+ +.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. .++.||+++..          
T Consensus       169 Eiap~-~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~  246 (513)
T KOG0254|consen  169 EIAPA-HIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAK  246 (513)
T ss_pred             hcCCh-hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHH
Confidence            99994 9999999999999999999995555444332 48999999999998888777 66665544210          


Q ss_pred             ----------CCCC--------------------c-hhhhhcc----ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHh
Q psy14075        179 ----------EVEP--------------------P-TLKSLVM----DPYILIAAGAITFANTGIAMLEPSLPIWMMDTM  223 (414)
Q Consensus       179 ----------~~~~--------------------~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (414)
                                +.+.                    + .++++++    ++.++...+..+.+..+.+....|.+.+++.. 
T Consensus       247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-  325 (513)
T KOG0254|consen  247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-  325 (513)
T ss_pred             HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-
Confidence                      0000                    0 0112222    12233445555555666777888888887764 


Q ss_pred             CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh------------hHHHHHHHHHH
Q psy14075        224 GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN------------INHLIVPNAGL  291 (414)
Q Consensus       224 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~------------~~~~~~~~~~~  291 (414)
                      |.+... .......++...++..+...+.||+|||+.++.+...+.++.+++.....            .+..+...+++
T Consensus       326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (513)
T KOG0254|consen  326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLF  404 (513)
T ss_pred             CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHH
Confidence            655433 45555667788888888899999999999999999999998887764321            11122222222


Q ss_pred             HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH--HHHH
Q psy14075        292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP--LLYL  369 (414)
Q Consensus       292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~--~~~~  369 (414)
                      -..+.......+.  ....|.+|.+.|+++.++......+...+-......+.+..+....|...+..+.+...  ....
T Consensus       405 v~~f~~g~g~v~w--~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~  482 (513)
T KOG0254|consen  405 IFSFAIGWGPVPW--VIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFF  482 (513)
T ss_pred             HHHHhcccccchh--hhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEE
Confidence            2233222222221  24679999999999999999988888877777666666655433444444444444444  3344


Q ss_pred             hcCCCchh
Q psy14075        370 LRNPPTKE  377 (414)
Q Consensus       370 ~~~~~~~~  377 (414)
                      .++.+.+.
T Consensus       483 ~pETkg~s  490 (513)
T KOG0254|consen  483 VPETKGLT  490 (513)
T ss_pred             cccCCCCc
Confidence            45444443

>KOG0252|consensus

Probab=99.94  E-value=9.8e-27  Score=208.18  Aligned_cols=352  Identities=15%  Similarity=0.102  Sum_probs=258.2

Q ss_pred             CCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHhhhhhh
Q psy14075         27 GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-------TYGVLFLARSLQGIGSSC   99 (414)
Q Consensus        27 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~   99 (414)
                      .++...+.+..+..+|..++|++.|++.||+|||+++...+++..+++++++++.       -.+++...|++.|+|.|+
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG  160 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG  160 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence            3455678899999999999999999999999999999999999999999888753       257889999999999999


Q ss_pred             hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc---------------CChhHHHHHHHHHHHHH
Q psy14075        100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---------------GKTAPFLILSALALGDG  164 (414)
Q Consensus       100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~---------------gw~~~f~~~~~~~~~~~  164 (414)
                      -+|.+.+..+|... +++||...+.+.+..++|.+.|.+++-.+..-+               -||..|.+.++.++...
T Consensus       161 DYPlSAtI~SE~an-~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l  239 (538)
T KOG0252|consen  161 DYPLSATIMSESAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL  239 (538)
T ss_pred             CCcchHHHhhhhhh-hccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998 699999999999999999888888776554211               29999999888887766


Q ss_pred             HHHHHhccCCCCC-----C--------CCC-C-----------------ch---hhhhccC---hHHHHHHHHHHHHHHH
Q psy14075        165 LLQLLLLQPGVVK-----Q--------EVE-P-----------------PT---LKSLVMD---PYILIAAGAITFANTG  207 (414)
Q Consensus       165 ~~~~~~~~~~~~~-----~--------~~~-~-----------------~~---~~~~~~~---~~~~~~~~~~~~~~~~  207 (414)
                      ...+..++.++.+     +        +++ +                 .+   +.+.+..   +++.-.+..+++.-.+
T Consensus       240 y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDia  319 (538)
T KOG0252|consen  240 YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIA  319 (538)
T ss_pred             HhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            6666554432211     0        000 0                 00   1111111   3444556677777778


Q ss_pred             HHhhhhchHHHHHHHhCCCccchhh--------HhH-HHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075        208 IAMLEPSLPIWMMDTMGADKWQQGV--------SFL-PASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA  278 (414)
Q Consensus       208 ~~~~~~~~~~~~~~~~g~~~~~~g~--------~~~-~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~  278 (414)
                      ++....+....++. .|..+.+...        ... +...+.+.|..+...++|++|||+..+.+++++.+..+.+...
T Consensus       320 fy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~  398 (538)
T KOG0252|consen  320 FYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGP  398 (538)
T ss_pred             hhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCC
Confidence            88887787777765 5666555443        111 1222333466677788999999999999999999988888776


Q ss_pred             hh-hHHHHHHHHHHHHHHHh-hhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-----hhchHH
Q psy14075        279 RN-INHLIVPNAGLGFAIGM-VDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-----TIGFEW  351 (414)
Q Consensus       279 ~~-~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-----~~g~~~  351 (414)
                      .+ ........+++++...+ .+....+......|.+|.+.|+++.|+....+..|+.++...+.++.+     ..|.++
T Consensus       399 y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~  478 (538)
T KOG0252|consen  399 YNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRN  478 (538)
T ss_pred             cccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchH
Confidence            44 11111112222221111 112233333457799999999999999999999999999999999999     788999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchhhhh
Q psy14075        352 MLFIIAILDFMYAPLLYLLRNPPTKEEKK  380 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (414)
                      ++++.+.+..++.+..+++++.+.+..++
T Consensus       479 v~~i~~~~~~~gi~~T~l~pEtk~~~lee  507 (538)
T KOG0252|consen  479 VFIILAGCMLLGILFTLLIPETKGKSLEE  507 (538)
T ss_pred             HHHHHHHHHHHhHheeEEeecccccCHHH
Confidence            99999999999999988888655544433

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.94  E-value=1.8e-24  Score=197.44  Aligned_cols=349  Identities=17%  Similarity=0.203  Sum_probs=255.3

Q ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHH---HHHHHHHhh----hhHH-HHHHHHHH
Q psy14075         21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF---LSTLIFAFG----RTYG-VLFLARSL   92 (414)
Q Consensus        21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~----~~~~-~l~~~r~l   92 (414)
                      +.++.|+|.+|+|.+.++..+...+.+|+.|.++||+|.||-++....+..   .......+.    .|.+ ..+++-+.
T Consensus        34 L~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~  113 (412)
T PF01306_consen   34 LTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIY  113 (412)
T ss_dssp             HHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTT
T ss_pred             HccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999997776554333222   222222222    2322 22333344


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      .|+......|..-+++.++.   ++.+.-.|-..+..++|.+++..++|.+.+ .+-+..||+....+++..++.++.++
T Consensus       114 l~~~f~~~~~~~Ea~~er~s---r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~  189 (412)
T PF01306_consen  114 LGLVFNAGVPLSEAYAERVS---RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKP  189 (412)
T ss_dssp             TTTTTTTHHHHHHHHHHHHH---HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS--
T ss_pred             HHHHHcccchHHHHHHHHHH---HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCC
Confidence            45555566677777776653   567788899999999999999999999987 46678888877776666665555554


Q ss_pred             CCCCCC--------CCCC---chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhC---CCccchhhHhHHHH
Q psy14075        173 PGVVKQ--------EVEP---PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMG---ADKWQQGVSFLPAS  238 (414)
Q Consensus       173 ~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~g~~~~~~~  238 (414)
                      +.+++.        ++++   ++..+++|+|++|.+.+........+..+....|.|..+.++   .+....|++.+..-
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v  269 (412)
T PF01306_consen  190 DVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQV  269 (412)
T ss_dssp             -SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred             cCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHH
Confidence            322210        1111   134578899999998888877777888888778888876433   33456788888888


Q ss_pred             HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075        239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY  318 (414)
Q Consensus       239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (414)
                      +..++.-.+.+++.+|+|.|+.++++..++.+=.+..++.++.+.+...-.+-++-....   ..+...++.+.+|++..
T Consensus       270 ~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~---lva~fkYI~~~fd~rls  346 (412)
T PF01306_consen  270 FLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLL---LVAAFKYITAHFDKRLS  346 (412)
T ss_dssp             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHS-GGGH
T ss_pred             HHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCCHhHH
Confidence            999999999999999999999999999999999999999999988888888888887776   45666788899999988


Q ss_pred             hhHHhHH-HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        319 GSVYAIG-DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       319 g~~~g~~-~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                      ++.+.+. +...++|..+.+.+.|.++|+.|++.+|.+++.+.+...++..+..+++++
T Consensus       347 At~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~  405 (412)
T PF01306_consen  347 ATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK  405 (412)
T ss_dssp             HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence            8888884 688899999999999999999999999999988888777777666554433

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.94  E-value=6.1e-25  Score=209.18  Aligned_cols=331  Identities=18%  Similarity=0.250  Sum_probs=273.9

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc----ccCCchh-HHHHHHHHHHHHHHHHhh-h-------hHH
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGYSLP-MFTGFVIMFLSTLIFAFG-R-------TYG   84 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~-------~~~   84 (414)
                      .+.+.+.+|+++..+|.+..+..+..++..|+.|.++|    |+||||. ++++.+..+++..++... +       ...
T Consensus        25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~  104 (428)
T PF13347_consen   25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV  104 (428)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence            45667788999999999999999999999999999999    8997666 667888888888888766 4       233


Q ss_pred             HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-------CChhHHHHHH
Q psy14075         85 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-------GKTAPFLILS  157 (414)
Q Consensus        85 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~~f~~~~  157 (414)
                      .+.+..++..++......+..++.+|..++.++|.+..+..+.+..+|..+...+.+.+.+.+       +|++..++.+
T Consensus       105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~  184 (428)
T PF13347_consen  105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLA  184 (428)
T ss_pred             HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHH
Confidence            457777777999999999999999999986579999999999999999876666666655432       5999999999


Q ss_pred             HHHHHHHHHHHHhccCCCC--CCCCC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchh
Q psy14075        158 ALALGDGLLQLLLLQPGVV--KQEVE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQG  231 (414)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g  231 (414)
                      ++.++..++..+..+|+++  +++++    .+.+++++|||.++......++............+.|.++..|.+ ...+
T Consensus       185 iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~  263 (428)
T PF13347_consen  185 IVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLIS  263 (428)
T ss_pred             HHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhH
Confidence            9998888888887777211  11111    235678889999999988898888888888888999999988877 4667


Q ss_pred             hHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy14075        232 VSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYL  309 (414)
Q Consensus       232 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  309 (414)
                      .+.....++.+++.++.++++||+|+|+.+..+..+.+++.+.+.+.+  +.+...+..++.|++.+.......+..++.
T Consensus       264 ~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~  343 (428)
T PF13347_consen  264 IFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADV  343 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccc
Confidence            777888899999999999999999999999999999999888887775  778888889999999999888777777766


Q ss_pred             hhcc----cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075        310 VDIR----HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF  349 (414)
Q Consensus       310 ~~~~----~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~  349 (414)
                      .|..    .++..|..+|+.+....++..+++.+.|.+.+..||
T Consensus       344 id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy  387 (428)
T PF13347_consen  344 IDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY  387 (428)
T ss_pred             hhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence            6543    234559999999999999999999999999887665

>KOG0255|consensus

Probab=99.94  E-value=6.5e-24  Score=207.31  Aligned_cols=342  Identities=18%  Similarity=0.168  Sum_probs=243.2

Q ss_pred             hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075         23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV  102 (414)
Q Consensus        23 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~  102 (414)
                      +.+..+.....+..+++.+|..++.+++|.++||+|||++++++.++..++.++.++++|++.+++.|+++|++.+....
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~  190 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT  190 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence            45666788889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC-----
Q psy14075        103 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK-----  177 (414)
Q Consensus       103 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~-----  177 (414)
                      ....++.|++++ ++|+.+..+ ......++.++++.++++.+  +||+.+++..++..+..+. +++.+|.++-     
T Consensus       191 ~~~~~~~E~~~~-~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g  265 (521)
T KOG0255|consen  191 VGFGLVAEIVSP-KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG  265 (521)
T ss_pred             HhHhhheeecCc-chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence            999999999996 999999999 88888888888988888887  8999999999998887666 4444333210     


Q ss_pred             -----------------CCCC---------------------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHH
Q psy14075        178 -----------------QEVE---------------------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWM  219 (414)
Q Consensus       178 -----------------~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (414)
                                       .+.+                     +..+.++++.|++....+...+.++.+.....-++...
T Consensus       266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~  345 (521)
T KOG0255|consen  266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNV  345 (521)
T ss_pred             chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhh
Confidence                             0000                     01133455555444433333333333333222233322


Q ss_pred             HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHH---HHHHHHHHHHHHH
Q psy14075        220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINH---LIVPNAGLGFAIG  296 (414)
Q Consensus       220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~g~~~~  296 (414)
                      .. +|.+   ........+.....+....+...|+.|||.....+..+..++++...+......   ......+..++.+
T Consensus       346 ~~-lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (521)
T KOG0255|consen  346 SG-LGGN---IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG  421 (521)
T ss_pred             hh-cCch---HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence            22 3333   333444445567777777789999999999999999999999888887654332   2233333333333


Q ss_pred             hhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH-HHhcCCCc
Q psy14075        297 MVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL-YLLRNPPT  375 (414)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~  375 (414)
                      ..   ......+..|..|...|..+.+.......+|.+++|.+.-.... ......+...+....+...+. .++++.+.
T Consensus       422 ~~---~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~  497 (521)
T KOG0255|consen  422 SA---FNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKG  497 (521)
T ss_pred             HH---HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCC
Confidence            33   33334567899999999999999999999999999998755444 222222222344444444444 55555544


Q ss_pred             hh
Q psy14075        376 KE  377 (414)
Q Consensus       376 ~~  377 (414)
                      +.
T Consensus       498 ~~  499 (521)
T KOG0255|consen  498 KP  499 (521)
T ss_pred             CC
Confidence            43

>TIGR00788 fbt folate/biopterin transporter

Probab=99.94  E-value=1.1e-24  Score=208.34  Aligned_cols=341  Identities=13%  Similarity=0.027  Sum_probs=245.1

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-----CchhHHHHHHHH-HHHHHHHHhhhhHHHHH-HH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMFTGFVIM-FLSTLIFAFGRTYGVLF-LA   89 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~-~~~~~~~~~~~~~~~l~-~~   89 (414)
                      ..|.+.+++|+|+++++...+...+...+-. ++|.++||++     ||+.++++.++. .+.....+..++..... +.
T Consensus        48 ~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~  126 (468)
T TIGR00788        48 LSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAF  126 (468)
T ss_pred             hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence            3466677899999999999999999999955 5999999997     777778877776 34444444445544444 47


Q ss_pred             HHHHhhhhhhhhhhHHHHHhhcCCCcchhhH---HHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075         90 RSLQGIGSSCSSVSGMGMLAERYPDDRERGN---AMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL  166 (414)
Q Consensus        90 r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~---~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~  166 (414)
                      .++.+++.+...++..++..|..+  +++..   ..+......++|.++++.++|.+.+.++||..|++.+.+.++..+.
T Consensus       127 ~~l~~~~~a~~dv~~da~~~e~~~--~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~  204 (468)
T TIGR00788       127 IFLAALAKALYDVLVDSLYSERIR--ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV  204 (468)
T ss_pred             HHHHHHHHHHHHHhHHHHHhhhhh--cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence            889999999999999999999986  33333   3334444456899999999999999999999999999888877444


Q ss_pred             HHHhccCCC---CCCCCC--------------------CchhhhhccChHHHHHHHHHHH-HHHHHHhhhhchHHHHHHH
Q psy14075        167 QLLLLQPGV---VKQEVE--------------------PPTLKSLVMDPYILIAAGAITF-ANTGIAMLEPSLPIWMMDT  222 (414)
Q Consensus       167 ~~~~~~~~~---~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  222 (414)
                      ..+. +|++   .++..+                    ..+.++.+++|.++...+..++ ..........+. .+.++.
T Consensus       205 ~~~~-~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~  282 (468)
T TIGR00788       205 SNLS-KERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQC  282 (468)
T ss_pred             HHhc-ccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEccc
Confidence            4444 4432   111000                    0123455677887765554544 222222221111 123345


Q ss_pred             hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh----------hhhHHHHHHHHHHH
Q psy14075        223 MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA----------RNINHLIVPNAGLG  292 (414)
Q Consensus       223 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~g  292 (414)
                      .|+++.+.|......+++.+++..+.+++.+|++.|+++.++.++.+++.+.....          ++.+......++.+
T Consensus       283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~  362 (468)
T TIGR00788       283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE  362 (468)
T ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence            89999999999999999999999999999999999999999998888876543211          22223344556667


Q ss_pred             HHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-----hHHHHHHHHHHHHHHHH
Q psy14075        293 FAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-----FEWMLFIIAILDFMYAP  365 (414)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-----~~~~~~~~~~~~~~~~~  365 (414)
                      ++.+...   .+......+..|++..|+.+++.++..++|..+++.++|.+.+..|     ++..+....++.+..++
T Consensus       363 ~~~g~~~---~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~  437 (468)
T TIGR00788       363 VLAQLKF---MPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLL  437 (468)
T ss_pred             HHHHHHH---ccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHH
Confidence            7766663   3444567788889999999999999999999999999999999888     77666655554444433

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.94  E-value=7.4e-23  Score=194.00  Aligned_cols=342  Identities=16%  Similarity=0.148  Sum_probs=272.1

Q ss_pred             chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhH-HHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075         30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPM-FTGFVIMFLSTLIFAFG--RTYGVLFLARSLQGIGSSCSSVSGMG  106 (414)
Q Consensus        30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~  106 (414)
                      +..++..++..+..++..|+.|.++|+-|+||.+ .+...+..+++.+..+.  ++++...+..++.-++.+.......+
T Consensus        70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna  149 (477)
T PF11700_consen   70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA  149 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4557889999999999999999999999976664 45555666677776663  34555556666767888888888999


Q ss_pred             HHhhcCCCcchh--------------------------hHHHHHHHHHHhhhhhhchhhhhHhhhh--------cCChhH
Q psy14075        107 MLAERYPDDRER--------------------------GNAMGIALGGLALGVLIGPPFGGIMYQF--------VGKTAP  152 (414)
Q Consensus       107 ~i~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~gw~~~  152 (414)
                      ++.|..++ +++                          ++..+.-.....+|.++.-.+.-.+...        .+-|..
T Consensus       150 ~LP~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~  228 (477)
T PF11700_consen  150 YLPDLARP-EPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA  228 (477)
T ss_pred             HhHhhcCC-ChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence            99999995 777                          8999988888889988887776554322        234888


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCC-CCCCCC------------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHH
Q psy14075        153 FLILSALALGDGLLQLLLLQPGVV-KQEVEP------------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWM  219 (414)
Q Consensus       153 f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (414)
                      +.+.++.-++..+..++..|++++ +..++.            +.++++.|.|......+..++..-+...+......|.
T Consensus       229 ~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a  308 (477)
T PF11700_consen  229 FLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYA  308 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999888888888888877765 222221            1245566778888889999999999999999999999


Q ss_pred             HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH--HHHHHHHHHHHHHHHHhhh--------hhhhHHHHHHHH
Q psy14075        220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY--LAALLGLLIIGICLMMIPL--------ARNINHLIVPNA  289 (414)
Q Consensus       220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~  289 (414)
                      .+++|++..+...+.....+.+++|.++.+++.||+|.|  +++..+.++..+..+.-.+        .++.+.+++..+
T Consensus       309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~  388 (477)
T PF11700_consen  309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV  388 (477)
T ss_pred             HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence            999999999999999999999999999999999999988  7777776666443332222        456777888888


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHH
Q psy14075        290 GLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~  368 (414)
                      +.|+..|..++..-++   ..+..|+++.+..+|++.......+.+||.+.|.+.+.+| .+..+....++.+++.++..
T Consensus       389 ~~G~~~G~~qs~sRs~---~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~  465 (477)
T PF11700_consen  389 LIGLFMGGIQSASRSL---FSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF  465 (477)
T ss_pred             HHHHHhhhHHHHHHHH---HHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence            9999999887766655   5577788888999999999999999999999999999998 88899888888888887776


Q ss_pred             HhcCCCc
Q psy14075        369 LLRNPPT  375 (414)
Q Consensus       369 ~~~~~~~  375 (414)
                      ..+.++.
T Consensus       466 ~v~~~~g  472 (477)
T PF11700_consen  466 FVDVEKG  472 (477)
T ss_pred             hccchhh
Confidence            6655433

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PRK11462 putative transporter; Provisional

Probab=99.94  E-value=3.5e-23  Score=198.01  Aligned_cols=330  Identities=13%  Similarity=0.081  Sum_probs=233.8

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCchh-HHHHHHHHHHHHHHHHhhhh------HHHHH
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYSLP-MFTGFVIMFLSTLIFAFGRT------YGVLF   87 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~------~~~l~   87 (414)
                      ..+.+..|+++..+|.+..+.-+..++..|+.|.++||    +||||. ++++.+..+++..++...++      ...++
T Consensus        34 ~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~  113 (460)
T PRK11462         34 FFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAA  113 (460)
T ss_pred             HHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence            44567789999999999999999999999999999996    788655 55677888888777665543      44566


Q ss_pred             HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-------CChhHHHHHHHHH
Q psy14075         88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-------GKTAPFLILSALA  160 (414)
Q Consensus        88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~~f~~~~~~~  160 (414)
                      +..++..++......+..++.+|..++.+||++..++...+..+|..+++.+...+.+..       +|+....+.+++.
T Consensus       114 ~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~  193 (460)
T PRK11462        114 ITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVA  193 (460)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence            777788999999988999999999987799999999999999999888887765555443       5777777777777


Q ss_pred             HHHHHHHHHhccCCCCCCCCC---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHH
Q psy14075        161 LGDGLLQLLLLQPGVVKQEVE---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPA  237 (414)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  237 (414)
                      ++...+.+...+|++++++++   ++..+..++||.++.+....++..............|.+..+|.+ ...+.+....
T Consensus       194 ~i~~~i~~~~~kE~~~~~~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~  272 (460)
T PRK11462        194 FMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTY  272 (460)
T ss_pred             HHHHHHHHhcceeccCCCccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHH
Confidence            776666665555543322221   234466788988877766666665555555555555555555543 3445666777


Q ss_pred             HHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc--
Q psy14075        238 SISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR--  313 (414)
Q Consensus       238 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--  313 (414)
                      .++.+++.++.+++.||+++|+....+..+..+..+++.+.+  +.....+..++.|++.+...+....+..+..|..  
T Consensus       273 ~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~  352 (460)
T PRK11462        273 CVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEW  352 (460)
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence            888899999999999999998877655444433333332222  2223344445566666665555555555565532  


Q ss_pred             --cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075        314 --HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF  349 (414)
Q Consensus       314 --~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~  349 (414)
                        .++.-|..++..+....+|.++++.+.|.+.+..||
T Consensus       353 ~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy  390 (460)
T PRK11462        353 CNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY  390 (460)
T ss_pred             hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence              133336666777789999999999999999887665

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.94  E-value=4.8e-23  Score=194.01  Aligned_cols=352  Identities=17%  Similarity=0.115  Sum_probs=258.2

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc----ccCCchhHHH-HHHHHHHHHHHHHhhhhHH--------
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGYSLPMFT-GFVIMFLSTLIFAFGRTYG--------   84 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~~~~~~--------   84 (414)
                      .+++.+++|.+..+.+++..+..+...+.+|+.|+++|    |+||||.+++ +.+...++.++.+++++++        
T Consensus        27 l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~  106 (477)
T TIGR01301        27 LTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLD  106 (477)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccc
Confidence            45677899999999999999999999999999999999    5999999877 4666777777877876653        


Q ss_pred             ---------HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchh--hHHHHHHHHHHhhhhhhchhhhhHh--hhhc----
Q psy14075         85 ---------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRER--GNAMGIALGGLALGVLIGPPFGGIM--YQFV----  147 (414)
Q Consensus        85 ---------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r--~~~~~~~~~~~~~g~~ig~~l~~~l--~~~~----  147 (414)
                               ..+++-.+..++.....++..++++|.+|+ ++|  +.++++.+.+.++|.++|+.+++..  .+.+    
T Consensus       107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~-~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~  185 (477)
T TIGR01301       107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGG-DARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTK  185 (477)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccc
Confidence                     223333344557777888889999999995 644  6899999999999999999999875  2222    


Q ss_pred             ---------CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC----------CC----CchhhhhccC-----hHHHHHHH
Q psy14075        148 ---------GKTAPFLILSALALGDGLLQLLLLQPGVVKQE----------VE----PPTLKSLVMD-----PYILIAAG  199 (414)
Q Consensus       148 ---------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~~~~~~-----~~~~~~~~  199 (414)
                               +.|..|++.++..++..++..+..+|++..++          .+    ...+++++++     |.++.+++
T Consensus       186 ~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~  265 (477)
T TIGR01301       186 TEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLL  265 (477)
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHH
Confidence                     56889999988888888877777666532100          00    1123343332     56788999


Q ss_pred             HHHHHHHHHHhhhhchHHHHH-HHhCCCccc----------hhhHhHHHHHHHHhhhhhhhhhhhhhhh-HHHHHHHHHH
Q psy14075        200 AITFANTGIAMLEPSLPIWMM-DTMGADKWQ----------QGVSFLPASISYLIGTNLFGPLGHRMGR-YLAALLGLLI  267 (414)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~----------~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~  267 (414)
                      ..++.+++++.+..+.+.|.. +.++.++.+          ..+....+++...+.+++..++.+|+|+ |+....+.++
T Consensus       266 vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~  345 (477)
T TIGR01301       266 VTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNII  345 (477)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence            999999999999999888876 455543321          1233445555666777788899999984 7777888888


Q ss_pred             HHHHHHHhhhhhh---------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc--ccchhhHHhH
Q psy14075        268 IGICLMMIPLARN---------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH--TAVYGSVYAI  324 (414)
Q Consensus       268 ~~i~~~~~~~~~~---------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~  324 (414)
                      .+++++...+.++                     .+..++...+.|+........-.++   +.+..+  .+..|..+|+
T Consensus       346 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal---~s~~~~~~~~~~G~~mgi  422 (477)
T TIGR01301       346 LAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFAL---ASIRSSNLGAGQGLSMGV  422 (477)
T ss_pred             HHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHH---HHHHccccCCCCcchhhH
Confidence            8888777765443                     2445566667777777665544444   334444  2445999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        325 GDVAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       325 ~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      .|.+..+.+.+.....|.+.+.+|  ...++.+.++.++++.+..++..++
T Consensus       423 lN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~  473 (477)
T TIGR01301       423 LNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR  473 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999999999999998777766  5667778888888887776655443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>KOG0253|consensus

Probab=99.93  E-value=2.2e-24  Score=187.56  Aligned_cols=351  Identities=13%  Similarity=0.043  Sum_probs=251.3

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS   97 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~   97 (414)
                      .|...+.+|.+..|..++......+..+++..+|.++|++|||+.+.+..+...+...+.+.++|+..+.+.|.+.|+|.
T Consensus       101 ~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~  180 (528)
T KOG0253|consen  101 LPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGV  180 (528)
T ss_pred             HHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccC
Confidence            46677888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy14075         98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK  177 (414)
Q Consensus        98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~  177 (414)
                      |. .|...++-.|..|. .+|...+-.. ..+.+|.+....+.-.+...+||||..........+.+...++..+.++-.
T Consensus       181 gg-~pv~~~~yle~lp~-~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~  257 (528)
T KOG0253|consen  181 GG-LPVDSAIYLEFLPS-SHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFY  257 (528)
T ss_pred             CC-ccHhHHHHHHhccC-cCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchh
Confidence            99 78888888999994 8888887777 999999999999999999999999998888866666555555544322100


Q ss_pred             ------------------------------------C---------------CCCCchhhhhccC---hHHHHHHHHHHH
Q psy14075        178 ------------------------------------Q---------------EVEPPTLKSLVMD---PYILIAAGAITF  203 (414)
Q Consensus       178 ------------------------------------~---------------~~~~~~~~~~~~~---~~~~~~~~~~~~  203 (414)
                                                          +               ++.+.+..+++..   ++.......++.
T Consensus       258 ~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfg  337 (528)
T KOG0253|consen  258 LAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFG  337 (528)
T ss_pred             hhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHh
Confidence                                                0               0000011122211   112223333333


Q ss_pred             HHHHHHhhhhchHHHHHHH-----------------h--CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHH
Q psy14075        204 ANTGIAMLEPSLPIWMMDT-----------------M--GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLG  264 (414)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~-----------------~--g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~  264 (414)
                      ..+.+++.........+..                 .  ..+...--.-..+..+....|.++.+++.||+|||+.+..+
T Consensus       338 nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~  417 (528)
T KOG0253|consen  338 NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALS  417 (528)
T ss_pred             hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHH
Confidence            3344444333332222221                 1  11111111223456788899999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075        265 LLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV  344 (414)
Q Consensus       265 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~  344 (414)
                      +++.+++.+.+....+.....+..+..-++....   ++....+..|.+|...|+++.|....+..+|+++.|.++  +.
T Consensus       418 l~~f~iflfll~~c~~rn~~tvllf~arafisg~---fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~  492 (528)
T KOG0253|consen  418 LILFGIFLFLLTTCKTRNAYTVLLFTARAFISGA---FQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MR  492 (528)
T ss_pred             HHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhch---heEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HH
Confidence            9999998887776654433333333333443333   344455788999999999999999999999999999998  44


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        345 NTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                      .......+..+.+.+++++.+...+++.+.+.
T Consensus       493 ~e~s~sl~i~vy~~~~ilagIavcffPiEtkG  524 (528)
T KOG0253|consen  493 AELSTSLPIFVYGALFILAGIAVCFFPIETKG  524 (528)
T ss_pred             hccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence            43443444555566667777777776655443

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.7e-23  Score=192.87  Aligned_cols=330  Identities=16%  Similarity=0.195  Sum_probs=274.3

Q ss_pred             hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCc-hhHHHHHHHHHHHHHHHHhhhh------HHHHHH
Q psy14075         20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYS-LPMFTGFVIMFLSTLIFAFGRT------YGVLFL   88 (414)
Q Consensus        20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~   88 (414)
                      .+.+..|+++..+|.+..+.-+-.++..|+.|.+.||    +||+ +.++++.+.+++.+.++-.+++      ....++
T Consensus        38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v  117 (467)
T COG2211          38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV  117 (467)
T ss_pred             HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence            4567789999999999999999999999999999996    8875 4577888999999998887773      456677


Q ss_pred             HHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCChhHHHHHHHHHH
Q psy14075         89 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKTAPFLILSALAL  161 (414)
Q Consensus        89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f~~~~~~~~  161 (414)
                      ...+.+++......+..++.++..++.+||.+..++.+.+.++|..+...+...+..       ..||+..-++.+++..
T Consensus       118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~  197 (467)
T COG2211         118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV  197 (467)
T ss_pred             HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence            789999999999999999999999877999999999999999997777666655553       3478888899999998


Q ss_pred             HHHHHHHHhccCCCCCCCC----CCchhh----hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhH
Q psy14075        162 GDGLLQLLLLQPGVVKQEV----EPPTLK----SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVS  233 (414)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  233 (414)
                      +..+.+++-.+|+..+.++    .+.+++    .++|||.+...++...+...+.....+....|.+..+|.+..+....
T Consensus       198 i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~  277 (467)
T COG2211         198 ILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLL  277 (467)
T ss_pred             HHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHH
Confidence            8888888877776543221    123333    57799999988888888888888888888989988889888888888


Q ss_pred             hHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075        234 FLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVD  311 (414)
Q Consensus       234 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  311 (414)
                      +.....+.+++.++..++.+|+|+|++..++.++..++.+.+.+.+  +....++..++.+++.+...+...+++.++.|
T Consensus       278 ~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vD  357 (467)
T COG2211         278 LLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVD  357 (467)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhh
Confidence            8888888888899999999999999999999999999888887765  45556666788889999888888888777775


Q ss_pred             c----ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075        312 I----RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF  349 (414)
Q Consensus       312 ~----~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~  349 (414)
                      .    ...+.-|..+|.++.+..+|.+++..+.|++.+..||
T Consensus       358 yge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy  399 (467)
T COG2211         358 YGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY  399 (467)
T ss_pred             HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            4    2344458999999999999999999999999987764

>TIGR01272 gluP glucose/galactose transporter

Probab=99.93  E-value=1.5e-23  Score=189.76  Aligned_cols=275  Identities=14%  Similarity=0.096  Sum_probs=211.9

Q ss_pred             HhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-----------
Q psy14075         78 AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-----------  146 (414)
Q Consensus        78 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-----------  146 (414)
                      +..++++.++++-++.|.|.+...+..+.++++..++ |++++.+++.+.++++|..++|.+++.+...           
T Consensus         5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~-~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~   83 (310)
T TIGR01272         5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPI-ETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVAT   83 (310)
T ss_pred             HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCc-chHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhh
Confidence            3567899999999999999999999999999999985 8999999999999999999999999988732           


Q ss_pred             -----cCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCC------CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhch
Q psy14075        147 -----VGKTAPFLILSALALGDGLLQLLLLQPGVVKQEV------EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSL  215 (414)
Q Consensus       147 -----~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (414)
                           ..|+++|++.+.+..+..+...+...++.+++++      +..+.++.+|+|+++...+..+++.........|.
T Consensus        84 ~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~  163 (310)
T TIGR01272        84 ANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFL  163 (310)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 4799999977777666555544443222111111      11122357788888888888888888899999999


Q ss_pred             HHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q psy14075        216 PIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGF  293 (414)
Q Consensus       216 ~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~  293 (414)
                      +.|+.+.  +|+++.+.+...+.+..+.++|+++.+++.||+++++.+.++..+..++.++....++... ....++.|+
T Consensus       164 ~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~  242 (310)
T TIGR01272       164 VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGL  242 (310)
T ss_pred             HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHH
Confidence            9999864  6899999999999999999999999999999999998888887777776655544443332 334556777


Q ss_pred             HHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHH
Q psy14075        294 AIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAIL  359 (414)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~  359 (414)
                      +.+..+|...+.   ..+..|++ .+++.++. ....+|+.+.|++.|.+.|..|.+.+|++...+
T Consensus       243 ~~s~i~P~~~s~---a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~  303 (310)
T TIGR01272       243 FNSIMFPTIFSL---ALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC  303 (310)
T ss_pred             HHHHHHHHHHHH---HHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence            777776654433   44444433 35666664 567899999999999999999988888754443

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG4686|consensus

Probab=99.93  E-value=4.4e-25  Score=185.26  Aligned_cols=350  Identities=17%  Similarity=0.213  Sum_probs=256.2

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHh
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSLQG   94 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G   94 (414)
                      .+++.|.+++.++..++.+.|+....+-..++|++.|| +|.|..-++-.....++.+.++   ..+.+|++..+|++.|
T Consensus        68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG  147 (459)
T KOG4686|consen   68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG  147 (459)
T ss_pred             hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeec
Confidence            45667788888999999999999999999999999997 7877776666666666666665   4689999999999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC------hh---HHHHHHHHH----H
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK------TA---PFLILSALA----L  161 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw------~~---~f~~~~~~~----~  161 (414)
                      +|.-..-++..+++.-|+.. |+.+.++|+.....-+|..+--.+.+++.++.+-      +.   .....+...    +
T Consensus       148 IGgESlAVaQN~yav~wFKG-KELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~sl  226 (459)
T KOG4686|consen  148 IGGESLAVAQNKYAVYWFKG-KELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSL  226 (459)
T ss_pred             cCchhhhhhhcceeEEEecC-ccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence            99888888889999999995 9999999999999999999988888888876431      11   111111111    1


Q ss_pred             HHHHHHHHhccCCCC--CCCC----CCchhhhhc-cChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh
Q psy14075        162 GDGLLQLLLLQPGVV--KQEV----EPPTLKSLV-MDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF  234 (414)
Q Consensus       162 ~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  234 (414)
                      +.+...-+..+..++  +.++    +.....+.. -.|.+|.+.+..+++..+..-+...-|.++++.+|+|+..++.+.
T Consensus       227 ical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~  306 (459)
T KOG4686|consen  227 ICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNIL  306 (459)
T ss_pred             HHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchh
Confidence            111111111111000  0000    011111222 147889998888898888888999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH-HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075        235 LPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI-CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR  313 (414)
Q Consensus       235 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  313 (414)
                      +.......+.+++.|.++||+|++...+.+..+..+ +-..+.+  +.+..+..+.+.|+.+........|.+.   ...
T Consensus       307 s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va---~~v  381 (459)
T KOG4686|consen  307 STVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVA---SLV  381 (459)
T ss_pred             hhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhh---hhC
Confidence            988888889999999999999998776665444433 3333333  2344567788889988887666777644   455


Q ss_pred             cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hH---HHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075        314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FE---WMLFIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~---~~~~~~~~~~~~~~~~~~~~~~~~  374 (414)
                      |+++.|+++|.++...++|-++.|.+.|.+.|+-| |.   .-|...+.+++....+.+...+++
T Consensus       382 pE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq  446 (459)
T KOG4686|consen  382 PEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQ  446 (459)
T ss_pred             CHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheeccc
Confidence            67888999999999999999999999999999876 33   344555566666666655555443

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.90  E-value=1.3e-28  Score=236.58  Aligned_cols=342  Identities=20%  Similarity=0.198  Sum_probs=240.5

Q ss_pred             CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHhhhhhhhhhhH
Q psy14075         28 ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR---TYGVLFLARSLQGIGSSCSSVSG  104 (414)
Q Consensus        28 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~  104 (414)
                      ++.+.+++.+...++..+++++.|.++||+|||+.+.++.++..++.++.++++   +++.+.++|++.|++.|...+..
T Consensus        44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~  123 (451)
T PF00083_consen   44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS  123 (451)
T ss_pred             hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            345689999999999999999999999999999999999999999999999999   99999999999999999999999


Q ss_pred             HHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc---CChhHHHHHHHHHHHHHHHHHHhccCCCCC----
Q psy14075        105 MGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---GKTAPFLILSALALGDGLLQLLLLQPGVVK----  177 (414)
Q Consensus       105 ~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~----  177 (414)
                      ..++.|..|+ ++|++..++.+.+..+|..++..++..+.+..   +||..+.+.+++.++..+...+. ||.|+-    
T Consensus       124 ~~~~~E~~~~-~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~-pESP~wL~~~  201 (451)
T PF00083_consen  124 PIYISEIAPP-KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFL-PESPRWLLSK  201 (451)
T ss_pred             cccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccceeccc
Confidence            9999999995 99999999999999999999988876554433   49999999998887765555444 433210    


Q ss_pred             ----C------C--------C--------C------CchhhhhccChH----HHHHHHHHHHH-HHHHHhhhhchHHHHH
Q psy14075        178 ----Q------E--------V--------E------PPTLKSLVMDPY----ILIAAGAITFA-NTGIAMLEPSLPIWMM  220 (414)
Q Consensus       178 ----~------~--------~--------~------~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~  220 (414)
                          +      +        +        .      +..+++++++++    +........+. ..+......+.|.+++
T Consensus       202 ~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~  281 (451)
T PF00083_consen  202 GRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE  281 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence                0      0        0        0      012445555533    22222222222 2223344445555554


Q ss_pred             HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh--h--hhhh-----HHHHHHHHHH
Q psy14075        221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP--L--ARNI-----NHLIVPNAGL  291 (414)
Q Consensus       221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~--~--~~~~-----~~~~~~~~~~  291 (414)
                      + .+.+..  -.......+...++.++...+.||+|||+.++.+..++.++.+.+.  .  ..+.     ...+....+.
T Consensus       282 ~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~  358 (451)
T PF00083_consen  282 N-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALF  358 (451)
T ss_pred             c-cccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeec
Confidence            4 566655  2233344566677777888999999999999998888887766664  1  1111     1112222222


Q ss_pred             HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH-h
Q psy14075        292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL-L  370 (414)
Q Consensus       292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~  370 (414)
                      ....+...  ......+..|.+|.+.|+++.|+......+++.++|.+...+.+..+....+.+.+.++++..+..++ .
T Consensus       359 ~~~~~~g~--~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~l  436 (451)
T PF00083_consen  359 FAFFSLGW--GPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFL  436 (451)
T ss_pred             cccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEE
Confidence            22222111  12222456899999999999999999999999999999998888877455566656655555555544 4


Q ss_pred             cCCCch
Q psy14075        371 RNPPTK  376 (414)
Q Consensus       371 ~~~~~~  376 (414)
                      ++.+++
T Consensus       437 pET~g~  442 (451)
T PF00083_consen  437 PETKGK  442 (451)
T ss_pred             eeCCCC
Confidence            444433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.89  E-value=3e-20  Score=175.94  Aligned_cols=338  Identities=12%  Similarity=0.087  Sum_probs=217.9

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-CCchhHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhh
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIGSSC   99 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~   99 (414)
                      .+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++.+..+ +...+++...+.++|.|.
T Consensus        37 ~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~  116 (493)
T PRK15462         37 TNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGL  116 (493)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccc
Confidence            567899999999999999999999999999999999 999999999999999987776543 223344444555566777


Q ss_pred             hhhhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc---CCC
Q psy14075        100 SSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ---PGV  175 (414)
Q Consensus       100 ~~~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~---~~~  175 (414)
                      ..+...++++|.+|++ ++|.+++++.....++|..++|.+.+++.+..||++.|.+.++..++..+..+...+   +..
T Consensus       117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~  196 (493)
T PRK15462        117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR  196 (493)
T ss_pred             ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Confidence            7777788999999842 269999999999999999999999999999999999999877654443333332221   110


Q ss_pred             C-CCCCC-Cchh-----------------------h------------------------hhc---cChHHH---HHHHH
Q psy14075        176 V-KQEVE-PPTL-----------------------K------------------------SLV---MDPYIL---IAAGA  200 (414)
Q Consensus       176 ~-~~~~~-~~~~-----------------------~------------------------~~~---~~~~~~---~~~~~  200 (414)
                      . ++++. ++..                       .                        +..   .+++++   .+.+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~  276 (493)
T PRK15462        197 GVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF  276 (493)
T ss_pred             CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHH
Confidence            0 00000 0000                       0                        000   011222   22223


Q ss_pred             HHHHHHHHHhhhhchHHHHHHHh-----CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh--H-----HHHHHHHHHH
Q psy14075        201 ITFANTGIAMLEPSLPIWMMDTM-----GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR--Y-----LAALLGLLII  268 (414)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~--~-----~~~~~~~~~~  268 (414)
                      ..+.+..+....+.+..|.++..     |++ ...+++.+...+..++..++.+++=.|..+  |     .-..+++++.
T Consensus       277 ~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~  355 (493)
T PRK15462        277 SMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLM  355 (493)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHH
Confidence            33334444444455555555532     222 235567777777777777766665444421  1     1256788888


Q ss_pred             HHHHHHhhhh---------hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH-HHHHhHHHH
Q psy14075        269 GICLMMIPLA---------RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF-CLGFAIGPA  338 (414)
Q Consensus       269 ~i~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~ig~~  338 (414)
                      +++++.+.+.         .+.++++...++..++.-+..|...+.   +.+..|++.+|..+|...... .+|..++..
T Consensus       356 g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~---~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~  432 (493)
T PRK15462        356 SAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQ---ITRIEIPGVTGVLTGIYMLLSGAIANYLAGV  432 (493)
T ss_pred             HHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHH---HHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8887766542         134455667777888888887666654   567788889999999875422 455555444


Q ss_pred             HHHHHHh------------hhchHHHHHHHHHHHHHH
Q psy14075        339 MSGTLVN------------TIGFEWMLFIIAILDFMY  363 (414)
Q Consensus       339 ~~g~l~~------------~~g~~~~~~~~~~~~~~~  363 (414)
                      +.+...+            ...|...|...+...++.
T Consensus       433 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  469 (493)
T PRK15462        433 IADQTSQASFDASGAINYSINAYIEVFDQITWGALAC  469 (493)
T ss_pred             HHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence            4443321            113556677666655554

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.88  E-value=3.2e-20  Score=166.10  Aligned_cols=340  Identities=17%  Similarity=0.143  Sum_probs=266.1

Q ss_pred             chHHHHHHHHHHHHHHhhhHHHHhhcccCCchh-HHHHHHHHHHHHHHHHhhhh--H-HHHHHHHHHHhhhhhhhhhhHH
Q psy14075         30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLP-MFTGFVIMFLSTLIFAFGRT--Y-GVLFLARSLQGIGSSCSSVSGM  105 (414)
Q Consensus        30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~~~~~~~~~  105 (414)
                      +..|...++..+..++.+|+.|.++|+.|+||. +-....+..++..+..++++  + +..++...+..++.....+...
T Consensus        58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd  137 (438)
T COG2270          58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD  137 (438)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence            456888899999999999999999999997665 44555555666666666654  4 4445566888899999999999


Q ss_pred             HHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhH---hh---------------hhcCChhHHHHHHHHHHHHHHHH
Q psy14075        106 GMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI---MY---------------QFVGKTAPFLILSALALGDGLLQ  167 (414)
Q Consensus       106 ~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~---l~---------------~~~gw~~~f~~~~~~~~~~~~~~  167 (414)
                      +++.+..+ +++-++..+.-.....+|+.+.-+..-.   ..               +...-|..+.+.++-.++..++.
T Consensus       138 s~L~~~~~-k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm  216 (438)
T COG2270         138 SMLPRLTT-KDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM  216 (438)
T ss_pred             hHhhhhcC-ccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence            99999998 4888888777666666666555444311   11               22346888999999988888888


Q ss_pred             HHhccCCCCCCCCC-----------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHH
Q psy14075        168 LLLLQPGVVKQEVE-----------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLP  236 (414)
Q Consensus       168 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~  236 (414)
                      ++..++.++...+.           ..+++++.+++.+....+..++..-+.+........|....+|++..+..++...
T Consensus       217 ~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~  296 (438)
T COG2270         217 ILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIA  296 (438)
T ss_pred             HhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence            88877665432111           1245677778888888889999988889999999999998899999999999999


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc
Q psy14075        237 ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA  316 (414)
Q Consensus       237 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  316 (414)
                      ..+..++|.++.|++.||++.|+++..+.++..+..+...+.......++..++.|+..|..++..-+   +..+..|++
T Consensus       297 ~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRS---y~~~lvp~~  373 (438)
T COG2270         297 LSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRS---YLARLVPKG  373 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHH---HHHHhCCCc
Confidence            99999999999999999999999999998888877776666665666677778888888888665554   466778888


Q ss_pred             chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        317 VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       317 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      +-++.+|+++........+||.+.+.+.+.+| .+..+....++..++.+++...+.+
T Consensus       374 k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~  431 (438)
T COG2270         374 KEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP  431 (438)
T ss_pred             cccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence            88999999999999999999999999999887 6666666666666666665555443

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.87  E-value=1.4e-18  Score=156.07  Aligned_cols=345  Identities=17%  Similarity=0.142  Sum_probs=259.3

Q ss_pred             hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-----CchhHH-HHHHHHHHHHHHHHhh-----h--------
Q psy14075         21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMF-TGFVIMFLSTLIFAFG-----R--------   81 (414)
Q Consensus        21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~-~~~~~~~~~~~~~~~~-----~--------   81 (414)
                      +..|++++..-.+.+.+...+... ..+.+|..+|+.+     ||..++ .|.++...+..+..++     .        
T Consensus         6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~   84 (403)
T PF03209_consen    6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP   84 (403)
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence            458899999999999999888775 5999999999998     776644 5666666666555442     2        


Q ss_pred             h-HH--HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhH---HHH
Q psy14075         82 T-YG--VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAP---FLI  155 (414)
Q Consensus        82 ~-~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~---f~~  155 (414)
                      . .+  ...+...+.|+|.+...++..++++|..|| |+|+++.++...+.-+|.+++..+.+.+.+.++-.-.   +..
T Consensus        85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e-~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~  163 (403)
T PF03209_consen   85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPE-ERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG  163 (403)
T ss_pred             cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCH-hhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence            1 22  334555788999999999999999999995 9999999999999999999999999998887653322   222


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCCC----CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        156 LSALALGDGLLQLLLLQPGVVKQE----VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      .+++.++..++..+-.|++.++.+    +++    ..++++.++|+........++...+++.-...+-.|--+++|++.
T Consensus       164 ~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv  243 (403)
T PF03209_consen  164 VALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSV  243 (403)
T ss_pred             HHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCH
Confidence            233333333333333332221111    111    246677788888887777888888888888888889999999999


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhh-hhhhHHHHHHHHHHHHHHHHHhhh---hhhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGH-RMGRYLAALLGLLIIGICLMMIPL---ARNINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      .+..-+....+.+..++..+.+++.. |.++++...++.....+++.++..   ..+.+.+....+++|++.|.......
T Consensus       244 ~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgal  323 (403)
T PF03209_consen  244 GETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGAL  323 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHH
Confidence            99999999999999999999998776 677777777888887777666554   34677788889999999998854443


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh----------hchHHHHHHHHHHHHHHHHHHHHh
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT----------IGFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                         +...+..++++.|..+|.....+.+...++..++|.+.|.          .+|..+|.+-++..+++..+...+
T Consensus       324 ---s~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l  397 (403)
T PF03209_consen  324 ---SLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRL  397 (403)
T ss_pred             ---HHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence               3455666677789999999999999999999999998873          246777777777766666555444

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG2563|consensus

Probab=99.80  E-value=9e-18  Score=151.20  Aligned_cols=353  Identities=14%  Similarity=0.069  Sum_probs=247.7

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh------hHH--HHHHHHHHH
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR------TYG--VLFLARSLQ   93 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~   93 (414)
                      ..-+| +....-|+.-+|.+.+....+++-|+.||+|-|...+++..+..++..+-..+.      .++  ....+..+.
T Consensus        72 ~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~ia  150 (480)
T KOG2563|consen   72 NSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIA  150 (480)
T ss_pred             HHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHH
Confidence            34455 667778999999999999999999999999999999999999999998876653      345  667888888


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh------cCChh--HHHHHHHHHHHHHH
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF------VGKTA--PFLILSALALGDGL  165 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~------~gw~~--~f~~~~~~~~~~~~  165 (414)
                      +..+-........+..-||++ ++|..+..+-.++..+|..++.++...+..+      ..|..  .|+....+..+.++
T Consensus       151 a~Aq~Fim~lPskiA~~WF~~-~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~  229 (480)
T KOG2563|consen  151 AAAQPFILGLPSKIAAVWFPP-DQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLA  229 (480)
T ss_pred             HHhhhHhhccccHHHHhhCCc-chhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            888888877767888899996 9999999999999999988888887777643      34554  35545555544444


Q ss_pred             HHHHhccCCCCCCC------CC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH
Q psy14075        166 LQLLLLQPGVVKQE------VE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL  235 (414)
Q Consensus       166 ~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~  235 (414)
                      +..+..+++++...      .+    .++.++.++|+++.+..+.+......+++..+.+-.-+.. -|++...+|+...
T Consensus       230 l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~  308 (480)
T KOG2563|consen  230 LVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGA  308 (480)
T ss_pred             HHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHH
Confidence            44444443222111      11    2356788999999998888887777777776666544444 4778788999999


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhh-HHHHHHHHHHHHHHHHH-hhhhh---hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy14075        236 PASISYLIGTNLFGPLGHRMGR-YLAALLGLLIIGICLMM-IPLAR---NINHLIVPNAGLGFAIGMVDSSMMPELGYLV  310 (414)
Q Consensus       236 ~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~i~~~~-~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  310 (414)
                      ...+++++++.+.|.+.||.+. |...++......++... .....   +.+.+.....++|++.....|...-.   ..
T Consensus       309 l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~El---gv  385 (480)
T KOG2563|consen  309 LMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFEL---GV  385 (480)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceee---ee
Confidence            9999999999999999999876 44455555444444222 22221   22333444555555555444433322   33


Q ss_pred             hcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc----hHHHHHHHHHHHHHHHHHHHHhcCCCchhhhh
Q psy14075        311 DIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG----FEWMLFIIAILDFMYAPLLYLLRNPPTKEEKK  380 (414)
Q Consensus       311 ~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (414)
                      |..-+..-++..|+.+...++-+.+-..+.+...+..+    +...-+.....+.+..++..++++..+|.+.+
T Consensus       386 E~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e  459 (480)
T KOG2563|consen  386 ETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE  459 (480)
T ss_pred             eeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence            43333333788899999888888888999998888777    55455566666666666666666655554443

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.78  E-value=1e-16  Score=146.92  Aligned_cols=344  Identities=16%  Similarity=0.195  Sum_probs=236.3

Q ss_pred             hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhh
Q psy14075         25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCSS  101 (414)
Q Consensus        25 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~  101 (414)
                      +|.++++..-+.+.|..-.-+..+++|+++|| +|+||++..|.++.++|-++.+...  +...++++-.+.++|.|..-
T Consensus        56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K  135 (498)
T COG3104          56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK  135 (498)
T ss_pred             CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence            55999988888888887777889999999999 8999999999999999999999884  78899999999999999999


Q ss_pred             hhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC---C
Q psy14075        102 VSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV---K  177 (414)
Q Consensus       102 ~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~---~  177 (414)
                      +...++++|.+|++ .+|-..++++.++.++|+.++|++.+++.+.+||+..|...++-..+..+..+..++....   +
T Consensus       136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~  215 (498)
T COG3104         136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGV  215 (498)
T ss_pred             ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCC
Confidence            99999999999842 2467789999999999999999999999999999999999988877766665554421110   0


Q ss_pred             CCCCCch--------------------------------------------hhhhc------cC-hHHHH---HHHHHHH
Q psy14075        178 QEVEPPT--------------------------------------------LKSLV------MD-PYILI---AAGAITF  203 (414)
Q Consensus       178 ~~~~~~~--------------------------------------------~~~~~------~~-~~~~~---~~~~~~~  203 (414)
                      +++.+.+                                            ..+.+      .+ ++.+.   +.+...+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~i  295 (498)
T COG3104         216 PDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVI  295 (498)
T ss_pred             CCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHH
Confidence            0000000                                            00111      11 22222   2333333


Q ss_pred             HHHHHHhhhhchHHHHHHHhCCC----ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH-------HHHHHHHHHHHHHH
Q psy14075        204 ANTGIAMLEPSLPIWMMDTMGAD----KWQQGVSFLPASISYLIGTNLFGPLGHRMGRY-------LAALLGLLIIGICL  272 (414)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~g~~----~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~i~~  272 (414)
                      .+..+....+.+..|..+..+.+    .....++-+...+.-++..++..++-.|.+++       .-..+++.+++.++
T Consensus       296 FW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~f  375 (498)
T COG3104         296 FWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGF  375 (498)
T ss_pred             HHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHH
Confidence            44444445555556655432222    12456677777788888887777776664322       23456777777776


Q ss_pred             HHhhhh----------hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075        273 MMIPLA----------RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT  342 (414)
Q Consensus       273 ~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~  342 (414)
                      +++...          .+.+..+...++.+++--+..|...+.   +....|+...+..++........|..++..+.+.
T Consensus       376 l~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~---~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~  452 (498)
T COG3104         376 LILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSM---VTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL  452 (498)
T ss_pred             HHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHH---HHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence            666543          135566677778888888776655544   5677777777777777666666666666665552


Q ss_pred             ------HHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        343 ------LVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       343 ------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                            ..+.......|...+...++..+..+...
T Consensus       453 ~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~  487 (498)
T COG3104         453 TAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS  487 (498)
T ss_pred             ccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence                  23334456677777776666655554443

>KOG2816|consensus

Probab=99.75  E-value=2.8e-16  Score=147.66  Aligned_cols=299  Identities=21%  Similarity=0.299  Sum_probs=227.7

Q ss_pred             HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh--hhhhhhhHHHHHhhcCCCcc
Q psy14075         39 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG--SSCSSVSGMGMLAERYPDDR  116 (414)
Q Consensus        39 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~  116 (414)
                      ..+...+.++..|.++||+|||..+....+...+..+...+.. +|.++    +.|+.  .+.......++++|... ++
T Consensus        71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~-~~  144 (463)
T KOG2816|consen   71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISS-EE  144 (463)
T ss_pred             hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccc-hh
Confidence            3677889999999999999999999999998888888777665 33333    44432  33456667899999999 59


Q ss_pred             hhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCCC---------Cc----
Q psy14075        117 ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVE---------PP----  183 (414)
Q Consensus       117 ~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----  183 (414)
                      +|....|+.+.....+..++|.+++.+.+..|.-.+|.+..+..++..+..+.+.||+..+++++         ..    
T Consensus       145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~  224 (463)
T KOG2816|consen  145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSS  224 (463)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccch
Confidence            99999999999999999999999999999999999999999999998888888888765443332         00    


Q ss_pred             ----hh---hhhccChHHHHHHHHHHHHHHHHHh-hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhh-hhhhh
Q psy14075        184 ----TL---KSLVMDPYILIAAGAITFANTGIAM-LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFG-PLGHR  254 (414)
Q Consensus       184 ----~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g-~l~d~  254 (414)
                          .+   .+.-++|..+.+++..++....... ..-..+.|+...+++++.+.+.+.+..+....++..+.. .+...
T Consensus       225 ~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~  304 (463)
T KOG2816|consen  225 HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI  304 (463)
T ss_pred             hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                01   1112234455545444444433332 222446778888999999999999999999999888766 67777


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075        255 MGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA  334 (414)
Q Consensus       255 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~  334 (414)
                      ++.++.+..|+....+....+.+..+.|..+....+.++.. ...+...   +......+++++|++.++...+..+...
T Consensus       305 l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~-~~~pa~~---s~~s~~v~~~e~g~v~~~is~i~~l~~~  380 (463)
T KOG2816|consen  305 LGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG-IVFPAIR---AFASILVSPEEQGKVFGIISGIEGLSGV  380 (463)
T ss_pred             HhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-chhHHHH---hHHHhhcccccccchhhHHHHHHHHhhh
Confidence            88888888999999999999999988887666555544433 2323333   3455566688889999999999999999


Q ss_pred             HHHHHHHHHHhhh
Q psy14075        335 IGPAMSGTLVNTI  347 (414)
Q Consensus       335 ig~~~~g~l~~~~  347 (414)
                      ++|.+.+.++..+
T Consensus       381 ~~~~~~~~i~~~t  393 (463)
T KOG2816|consen  381 VSPALYGNIFALT  393 (463)
T ss_pred             hhHHHHHHHHHHH
Confidence            9999999887643

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.74  E-value=1.3e-15  Score=144.14  Aligned_cols=353  Identities=19%  Similarity=0.210  Sum_probs=236.0

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-----CchhHHHHHHHHHHHHHHHHhh----hhHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMFTGFVIMFLSTLIFAFG----RTYGVLF   87 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~----~~~~~l~   87 (414)
                      ..|.+++++|+++++...+.+...+...+ .++.|.++|.+-     ||+-++++.++.+++.+..+..    .+.....
T Consensus        12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~   90 (433)
T PF03092_consen   12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV   90 (433)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence            45778899999999999999999988866 889999999863     4455667777776666655543    3566666


Q ss_pred             HHHHHHhhhhhhhhhhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075         88 LARSLQGIGSSCSSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL  166 (414)
Q Consensus        88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~  166 (414)
                      +.-++..+|.+.......+++.|....+ ++|+...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+.
T Consensus        91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~  170 (433)
T PF03092_consen   91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV  170 (433)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence            7778889999999999999999987321 337888888899999999999999999999999999999999888887777


Q ss_pred             HHHhccCCCCCCC-------CC------------CchhhhhccChHHHHHHH-HHHHHHHHHHhhhhchHHHHHHHhC--
Q psy14075        167 QLLLLQPGVVKQE-------VE------------PPTLKSLVMDPYILIAAG-AITFANTGIAMLEPSLPIWMMDTMG--  224 (414)
Q Consensus       167 ~~~~~~~~~~~~~-------~~------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g--  224 (414)
                      .++..+|+++.++       ++            -.+.++.++.|.++...+ ..++............-.+..+..+  
T Consensus       171 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp  250 (433)
T PF03092_consen  171 ALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGP  250 (433)
T ss_pred             HHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccccc
Confidence            7766665211110       00            012334556666665544 3333222221111100111223345  


Q ss_pred             -CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH-hhhh---------hhhHHHHHHHHHHHH
Q psy14075        225 -ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM-IPLA---------RNINHLIVPNAGLGF  293 (414)
Q Consensus       225 -~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~-~~~~---------~~~~~~~~~~~~~g~  293 (414)
                       +++...+....+..++.++|..+..+...+..-|+++....++..+..+. +.+.         ++.+-...-.++..+
T Consensus       251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~  330 (433)
T PF03092_consen  251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV  330 (433)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence             78878888887788888888888877777777777777666665544332 1111         111111222233333


Q ss_pred             HHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch--------HHHHHHHHHHHHHHHH
Q psy14075        294 AIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF--------EWMLFIIAILDFMYAP  365 (414)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~--------~~~~~~~~~~~~~~~~  365 (414)
                      .....   +.+.....++..|+..-|+.+++..++.++|..++..++..+.+.++.        ....++..++.++...
T Consensus       331 ~~~i~---~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~  407 (433)
T PF03092_consen  331 IGMIA---FMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLP  407 (433)
T ss_pred             HHHHH---HHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence            33332   345555677888998889999999999999999999999998887652        2333444444444444


Q ss_pred             HHHHhcCC
Q psy14075        366 LLYLLRNP  373 (414)
Q Consensus       366 ~~~~~~~~  373 (414)
                      +..+++++
T Consensus       408 ll~lLp~~  415 (433)
T PF03092_consen  408 LLFLLPPQ  415 (433)
T ss_pred             HHHHcCCC
Confidence            44445443

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG3626|consensus

Probab=99.73  E-value=4e-16  Score=150.35  Aligned_cols=252  Identities=19%  Similarity=0.181  Sum_probs=208.4

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh---------------
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR---------------   81 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---------------   81 (414)
                      .+..+.+.|+++.++.|++.+.+=++..+...+..+..-|.-|-|.+-+|.++.+++.+++++-+               
T Consensus       119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~  198 (735)
T KOG3626|consen  119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ  198 (735)
T ss_pred             hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence            45778899999999999999999999999999999999999999999999999999999997631               


Q ss_pred             ----h--------------------------------HH-HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHH
Q psy14075         82 ----T--------------------------------YG-VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGI  124 (414)
Q Consensus        82 ----~--------------------------------~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~  124 (414)
                          +                                ++ .++++.++.|+|....++...+|+-|... +++-...+|+
T Consensus       199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk-~~~SplYlgi  277 (735)
T KOG3626|consen  199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVK-KKNSPLYLGI  277 (735)
T ss_pred             cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccc-ccCCcHHHHH
Confidence                0                                22 56778899999999999999999999998 5899999999


Q ss_pred             HHHHHhhhhhhchhhhhHhhhhc-------------------CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC------
Q psy14075        125 ALGGLALGVLIGPPFGGIMYQFV-------------------GKTAPFLILSALALGDGLLQLLLLQPGVVKQE------  179 (414)
Q Consensus       125 ~~~~~~~g~~ig~~l~~~l~~~~-------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~------  179 (414)
                      ......+|.++|-++++++.+.+                   .|..-|++.+.+.++..+..++++++.+++++      
T Consensus       278 ~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~  357 (735)
T KOG3626|consen  278 LYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARD  357 (735)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhh
Confidence            99999999999999999887532                   27777889999999989988888765543211      


Q ss_pred             -----------CCC-----------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHH
Q psy14075        180 -----------VEP-----------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPA  237 (414)
Q Consensus       180 -----------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  237 (414)
                                 ++.           ...+++++||.+...++...+....+.++.+++|-|+++++|.++..+..+....
T Consensus       358 ~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i  437 (735)
T KOG3626|consen  358 LHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSI  437 (735)
T ss_pred             hcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhh
Confidence                       000           1245778999999999999999999999999999999999999999999988665


Q ss_pred             HH-HHHhhhhhhhhhhhhhh--hHHHHHHHHHHHH
Q psy14075        238 SI-SYLIGTNLFGPLGHRMG--RYLAALLGLLIIG  269 (414)
Q Consensus       238 ~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~  269 (414)
                      ++ +..+|.+++|++.+|++  .|....+.++...
T Consensus       438 ~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~  472 (735)
T KOG3626|consen  438 GVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV  472 (735)
T ss_pred             hhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence            55 45567788999999875  3444433333333

>PRK10054 putative transporter; Provisional

Probab=99.70  E-value=9.7e-16  Score=144.31  Aligned_cols=175  Identities=14%  Similarity=0.185  Sum_probs=142.9

Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075        191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI  270 (414)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i  270 (414)
                      +|.++.+.+..++...+......++|.|+++++|.++.+.|+..+...++.++++++.|+++||+|||+.+..+.++..+
T Consensus         6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~   85 (395)
T PRK10054          6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS   85 (395)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence            34567777778888888888899999999988999999999999999999999999999999999999999999988888


Q ss_pred             HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075        271 CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFE  350 (414)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~  350 (414)
                      +.+.+.+.++.+...+...+.+.+.+...+.   ..+...|..|+++|+++.|+.+...++|..++|.+.+.+.+ .||+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~  161 (395)
T PRK10054         86 GFIAIPLVNNVTLVVLFFALINCAYSVFSTV---LKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSIN  161 (395)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccC
Confidence            8888888887766655555555544443332   23345677788889999999999999999999999999885 7899


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q psy14075        351 WMLFIIAILDFMYAPLLYL  369 (414)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~  369 (414)
                      ..|.+.+++.++..+...+
T Consensus       162 ~~f~~~~~~~~i~~i~~~~  180 (395)
T PRK10054        162 LPFWLAAICSAFPLVFIQI  180 (395)
T ss_pred             cHHHHHHHHHHHHHHHHHH
Confidence            9999888777776554433

>KOG2325|consensus

Probab=99.69  E-value=1.7e-15  Score=140.48  Aligned_cols=345  Identities=17%  Similarity=0.198  Sum_probs=220.9

Q ss_pred             hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCC-chhHHHHHHHHHHHHHHH-Hh---hh-hHHHHHHHHHHHhhhh
Q psy14075         24 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFTGFVIMFLSTLIF-AF---GR-TYGVLFLARSLQGIGS   97 (414)
Q Consensus        24 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~   97 (414)
                      |.+.+.+..|++.++..++.+++++..|.+..|.+. |+.++.|.++..++.++. ++   .+ ..+.++++|++.|+|.
T Consensus        65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~  144 (488)
T KOG2325|consen   65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV  144 (488)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence            478888999999999999999999999999999997 889999999999999988 43   23 6789999999999998


Q ss_pred             hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--C-----------ChhHHHHHHHHHHHHH
Q psy14075         98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--G-----------KTAPFLILSALALGDG  164 (414)
Q Consensus        98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--g-----------w~~~f~~~~~~~~~~~  164 (414)
                      +..... .+|+++.... ++|.|+++....+..+|..+||.++..+....  |           +..+-|+.+++.++..
T Consensus       145 ~n~a~l-R~Y~a~~s~~-~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~  222 (488)
T KOG2325|consen  145 GNFAVL-RAYIADASTV-EDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYI  222 (488)
T ss_pred             ccHHHH-HHHHHhccCc-cchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHH
Confidence            876554 7899998874 89999999999999999999998876665321  1           3457788888888877


Q ss_pred             HHHHHhccCCCCCCCCC-------CchhhhhccCh-----HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhh
Q psy14075        165 LLQLLLLQPGVVKQEVE-------PPTLKSLVMDP-----YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGV  232 (414)
Q Consensus       165 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  232 (414)
                      +......+|..++.+++       .+.-.+..+++     ..+.+.+..+...+.+....+..+......++.+..++-.
T Consensus       223 v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~  302 (488)
T KOG2325|consen  223 VIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVL  302 (488)
T ss_pred             HHHHhheeecccCccccccccchhhccchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHH
Confidence            77777666654332211       11111222222     1223334444445555555666666666777877766544


Q ss_pred             HhH----HHHHHHHhhhhhhhhhh-hhhhhHHHHHHHHHHHHHHHHH--hhhh--h------h----------h------
Q psy14075        233 SFL----PASISYLIGTNLFGPLG-HRMGRYLAALLGLLIIGICLMM--IPLA--R------N----------I------  281 (414)
Q Consensus       233 ~~~----~~~~~~~~~~~~~g~l~-d~~~~~~~~~~~~~~~~i~~~~--~~~~--~------~----------~------  281 (414)
                      ..+    +.++..+.-.+...... .++.+|+.+..+.........+  +++.  .      +          .      
T Consensus       303 ~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~  382 (488)
T KOG2325|consen  303 YNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTT  382 (488)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccC
Confidence            333    22222222222222222 2223344444443333222222  2110  0      0          0      


Q ss_pred             --HHHHHHHHHHHHHHHhhhhh-hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075        282 --NHLIVPNAGLGFAIGMVDSS-MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI  358 (414)
Q Consensus       282 --~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~  358 (414)
                        ...+...+..-+..|...|. ..+..+...+...+..++...|.+......+..++|.+........|+++.+.+..+
T Consensus       383 ~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~  462 (488)
T KOG2325|consen  383 TAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLC  462 (488)
T ss_pred             cccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHH
Confidence              01111122222223333331 122333455666677779999999999999999999999999999999888877766


Q ss_pred             HHHHHHHHHHHh
Q psy14075        359 LDFMYAPLLYLL  370 (414)
Q Consensus       359 ~~~~~~~~~~~~  370 (414)
                      ..++....+...
T Consensus       463 ~~l~~~~l~~~~  474 (488)
T KOG2325|consen  463 LLLVVAALWIVF  474 (488)
T ss_pred             HHHHHHHHHHHH
Confidence            666555544433

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.69  E-value=4.6e-16  Score=139.43  Aligned_cols=171  Identities=17%  Similarity=0.187  Sum_probs=146.2

Q ss_pred             HHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q psy14075        200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR  279 (414)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~  279 (414)
                      .+....+.-..+..-.|...++ .++|..|.|.+.+...+..-++..+.|.++||.++|+.+..++++.++..+++++.+
T Consensus        37 GYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~  115 (448)
T COG2271          37 GYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP  115 (448)
T ss_pred             HHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh
Confidence            3333334334456666765554 689999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH--HHHHhhhchHHHHHHHH
Q psy14075        280 NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS--GTLVNTIGFEWMLFIIA  357 (414)
Q Consensus       280 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~--g~l~~~~g~~~~~~~~~  357 (414)
                      +.+.+.+...+-|.++|...|...-.   +..-+++++||+..++.|+..++|+.+.|++.  +++.++.+|+.+|++-+
T Consensus       116 s~~~~~~l~~lng~fQg~Gwpp~~~~---i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pg  192 (448)
T COG2271         116 SLFLFAVLWVLNGWFQGMGWPPCART---ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPG  192 (448)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcHHHHH---HHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHH
Confidence            99999999999999999997765544   56778899999999999999999999999999  99999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCC
Q psy14075        358 ILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       358 ~~~~~~~~~~~~~~~~~  374 (414)
                      +++++..++.++..|.+
T Consensus       193 iiaiival~~~~~~rd~  209 (448)
T COG2271         193 IIAIIVALILLFLLRDR  209 (448)
T ss_pred             HHHHHHHHHHHHHhCCC
Confidence            98888777766655443

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.69  E-value=3.3e-16  Score=124.77  Aligned_cols=138  Identities=43%  Similarity=0.745  Sum_probs=125.1

Q ss_pred             HHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCC
Q psy14075         35 MFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD  114 (414)
Q Consensus        35 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  114 (414)
                      +.+.+.++..+++++.|++.||+|||+.+..+.....++.+...+.++++.+.+.+++.|++.+...+...+++.|.+| 
T Consensus         3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-   81 (141)
T TIGR00880         3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP-   81 (141)
T ss_pred             EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC-
Confidence            3456678889999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             cchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075        115 DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus       115 ~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      +++|++.+++.+....+|..++|.+.+.+.+..+|++.|++.+...++..+...+..||
T Consensus        82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (141)
T TIGR00880        82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE  140 (141)
T ss_pred             hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            49999999999999999999999999999998999999999988888777776665543

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.68  E-value=1.6e-15  Score=144.70  Aligned_cols=168  Identities=16%  Similarity=0.175  Sum_probs=138.0

Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075        196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI  275 (414)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~  275 (414)
                      ...+..++.++....+...+|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||+.+.++.++.+++.++.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~  105 (434)
T PRK11663         27 TMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF  105 (434)
T ss_pred             HHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHH
Confidence            33444444444445667778887766 89999999999999999999999999999999999999999999999998888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075        276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFI  355 (414)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~  355 (414)
                      .+.++.+.+.+..++.|++.+...+...   ....+.+|+++|+++.++.+....+|..++|.+.+++.+.+||++.|.+
T Consensus       106 ~~~~~~~~l~~~~~l~g~~~g~~~~~~~---~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~  182 (434)
T PRK11663        106 GFSSSLWAFALLWVLNAFFQGWGWPVCA---KLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMI  182 (434)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHccchHHH---HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence            8888887777777777888876644333   4466788888999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHHHH
Q psy14075        356 IAILDFMYAPLL  367 (414)
Q Consensus       356 ~~~~~~~~~~~~  367 (414)
                      .++..++..+..
T Consensus       183 ~~i~~~~~~~~~  194 (434)
T PRK11663        183 AGIIAIVVGLFL  194 (434)
T ss_pred             HHHHHHHHHHHH
Confidence            877665544433

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.68  E-value=1.7e-15  Score=145.73  Aligned_cols=183  Identities=13%  Similarity=0.142  Sum_probs=148.2

Q ss_pred             ccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHH
Q psy14075        189 VMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLG  264 (414)
Q Consensus       189 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~  264 (414)
                      +++| .++.+.+..++..+++++...++|.|+++.  +|++..+++...+...++..++.++.|+++|| +|||+++..+
T Consensus         6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~   85 (475)
T TIGR00924         6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG   85 (475)
T ss_pred             cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence            4454 455666667777888899999999999887  89999999999999999999999999999999 8999999999


Q ss_pred             HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075        265 LLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV  344 (414)
Q Consensus       265 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~  344 (414)
                      .++.+++.+++.+.++.+.+.+...+.|++.+...+...+..+...+..++++|++++++.+...++|..+||.+.+++.
T Consensus        86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~  165 (475)
T TIGR00924        86 GIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA  165 (475)
T ss_pred             HHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999888887776666667777888887776665555443333222234788999999999999999999999999


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        345 NTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ++.||+..|...++..+++.+.....+
T Consensus       166 ~~~g~~~~f~~~~~~~~~~~l~~~~~~  192 (475)
T TIGR00924       166 ENYGYHVGFNLAAVGMVIGLLTFFAGR  192 (475)
T ss_pred             HhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence            999999999988776666555544444

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.68  E-value=3.4e-18  Score=164.62  Aligned_cols=329  Identities=18%  Similarity=0.164  Sum_probs=3.0

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh---------------
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR---------------   81 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---------------   81 (414)
                      .++.+++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++.+++++++++-+               
T Consensus        25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~  104 (539)
T PF03137_consen   25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSN  104 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence            46788999999999999999999999999999999999999999999999999999999886511               


Q ss_pred             -----------------------------------hHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHH
Q psy14075         82 -----------------------------------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL  126 (414)
Q Consensus        82 -----------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~  126 (414)
                                                         -+..++++.++.|+|....++...+|+-|..+ +++-+..+|+..
T Consensus       105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~-~~~splYiGi~~  183 (539)
T PF03137_consen  105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVS-KKNSPLYIGILY  183 (539)
T ss_dssp             -----------------------------------------------SSS------------------------------
T ss_pred             cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccc-cccCccchhhhh
Confidence                                               03467888999999999999999999999999 499999999999


Q ss_pred             HHHhhhhhhchhhhhHhhhhc----------------------CChhHHHHHHHHHHHHHHHHHHhccCCCCC-------
Q psy14075        127 GGLALGVLIGPPFGGIMYQFV----------------------GKTAPFLILSALALGDGLLQLLLLQPGVVK-------  177 (414)
Q Consensus       127 ~~~~~g~~ig~~l~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------  177 (414)
                      ....+|.++|-++++.+.+.+                      .|-.-|++.+.+.++..++.+.++++-+..       
T Consensus       184 ~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~  263 (539)
T PF03137_consen  184 AMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEK  263 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchh
Confidence            999999999999998877421                      266677788888888888777776432211       


Q ss_pred             --C--C-----------CC------------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccch
Q psy14075        178 --Q--E-----------VE------------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQ  230 (414)
Q Consensus       178 --~--~-----------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  230 (414)
                        +  +           ++            .+..+++++||.+....+...+......++.+++|.|++.+++.++.++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A  343 (539)
T PF03137_consen  264 ESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQA  343 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence              0  0           00            0124567889999999999999999999999999999999999999999


Q ss_pred             hhHhHHHHH-HHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHHHH---hhh--------h----hh------------
Q psy14075        231 GVSFLPASI-SYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICLMM---IPL--------A----RN------------  280 (414)
Q Consensus       231 g~~~~~~~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~~~---~~~--------~----~~------------  280 (414)
                      +.+.....+ +.++|.+++|++.+|++  .|..+....+...++.+.   ..+        +    +.            
T Consensus       344 ~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~  423 (539)
T PF03137_consen  344 SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNL  423 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCC
Confidence            988876555 67778899999999875  344443333333333222   100        0    00            


Q ss_pred             ------------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHH-HHHHHhH
Q psy14075        281 ------------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVA-FCLGFAI  335 (414)
Q Consensus       281 ------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~i  335 (414)
                                              -..+....++..+..........+......+..++++|+.+.|+.... +-+|.+-
T Consensus       424 ~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IP  503 (539)
T PF03137_consen  424 TCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIP  503 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcc
Confidence                                    011222222222222222222334444456778899999999997644 4568899


Q ss_pred             HHHHHHHHHhh
Q psy14075        336 GPAMSGTLVNT  346 (414)
Q Consensus       336 g~~~~g~l~~~  346 (414)
                      ||.++|.+.|.
T Consensus       504 gPIifG~iiD~  514 (539)
T PF03137_consen  504 GPIIFGAIIDS  514 (539)
T ss_dssp             -----------
T ss_pred             hHHHHhHHHhh
Confidence            99999999996

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.66  E-value=7.4e-14  Score=123.94  Aligned_cols=235  Identities=17%  Similarity=0.195  Sum_probs=170.8

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS  101 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~  101 (414)
                      -+++|.+..|++.+....+...++..++.|.++||+|||+.-+.-.++++++++ +-..++++.++++|++.|++.+..+
T Consensus        61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLf  139 (354)
T PF05631_consen   61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLF  139 (354)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999999999999999886 4566899999999999999999998


Q ss_pred             hhHHHHHh-hc----CCCcchhhHHHHHHH-HHHhhhhhhchhhhhHhhhhcCC--hhHHHHHHHHHHHHHHHHHHhccC
Q psy14075        102 VSGMGMLA-ER----YPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQFVGK--TAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus       102 ~~~~~~i~-~~----~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      .+--++.. |.    +| ++..+..++... ..+++-.+.+.+++..+.+..+.  ..+|....++.++..++.....+|
T Consensus       140 S~FEsW~V~Eh~~~g~~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E  218 (354)
T PF05631_consen  140 SAFESWMVHEHNKRGFP-QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE  218 (354)
T ss_pred             HHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence            88777653 32    23 233444444444 34445556666677777776554  789998888888877776666555


Q ss_pred             CCCCCCCCC-------chhhhhccChHHHHHHHHHHHHHHHHHhh-hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhh
Q psy14075        174 GVVKQEVEP-------PTLKSLVMDPYILIAAGAITFANTGIAML-EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT  245 (414)
Q Consensus       174 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~  245 (414)
                      +..+.+++.       +.++.+.+||+++.+.+...+.-..++.+ ..|.|..- .  +.+..-.|++++.+.++.++|+
T Consensus       219 Nyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~--~~~~~P~GlIFssFM~a~MlGS  295 (354)
T PF05631_consen  219 NYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-P--DDEELPLGLIFSSFMVAMMLGS  295 (354)
T ss_pred             cCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-C--CCCCCCchHHHHHHHHHHHHHH
Confidence            443321111       23456778899988888777776655554 44666643 1  2223457999999999999999


Q ss_pred             hhhhhhhh-hhhhHHHH
Q psy14075        246 NLFGPLGH-RMGRYLAA  261 (414)
Q Consensus       246 ~~~g~l~d-~~~~~~~~  261 (414)
                      .+..++.. +......+
T Consensus       296 ~lf~~l~s~~~~~e~~l  312 (354)
T PF05631_consen  296 SLFSRLLSKSLRPESLL  312 (354)
T ss_pred             HHHHHHHhCCCCHHHHH
Confidence            98876554 43333333

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.7e-14  Score=131.02  Aligned_cols=177  Identities=20%  Similarity=0.174  Sum_probs=160.3

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      ...+.+.+..|......+.....+|...+| +|.|..++|...+.++.+..++.++...+.||++||++++..+.++.++
T Consensus        13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~   91 (394)
T COG2814          13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS   91 (394)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence            456677778888888889999999998777 8999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075        272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW  351 (414)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~  351 (414)
                      .++..+++|++.+.+.-++.|+..|..++.....   ..+..|+++|+++.++..+...+...+|.+++.++-|.+|||.
T Consensus        92 n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~---a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~  168 (394)
T COG2814          92 NLLSALAPSFAVLLLARALAGLAHGVFWSIAAAL---AARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA  168 (394)
T ss_pred             HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence            9999999999999999999999999997765544   6688889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC
Q psy14075        352 MLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +|...+.+.++..+..+...+
T Consensus       169 ~F~~ia~l~ll~~~~~~~~lP  189 (394)
T COG2814         169 TFLAIAVLALLALLLLWKLLP  189 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhCC
Confidence            999999988888776665444

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.66  E-value=4.3e-15  Score=138.43  Aligned_cols=171  Identities=19%  Similarity=0.301  Sum_probs=141.8

Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy14075        197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP  276 (414)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~  276 (414)
                      +....++...+.......+|.|..+ .+.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~   82 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP   82 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence            4455666667777777788888877 688999999999999999999999999999999999999999888888777777


Q ss_pred             hhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075        277 LAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW  351 (414)
Q Consensus       277 ~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~  351 (414)
                      +.+     +.+.+.+..++.|++.+...+...+   ...|..|+++|++++++.+....+|..++|.+.+.+.+..||++
T Consensus        83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~  159 (365)
T TIGR00900        83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQA---MLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKW  159 (365)
T ss_pred             HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence            666     7777788888888888877554443   46678888899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q psy14075        352 MLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~  371 (414)
                      .|++.++..++..+.....+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~  179 (365)
T TIGR00900       160 AIWVDAVGFAISALLIVSVR  179 (365)
T ss_pred             HHHHHHHHHHHHHHHHHhcc
Confidence            99887776666555544443

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.65  E-value=6.4e-15  Score=136.64  Aligned_cols=169  Identities=25%  Similarity=0.477  Sum_probs=139.5

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA  278 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~  278 (414)
                      +..++...........+|.++.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+...+.
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~   82 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA   82 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence            44555566666677777856777789999999999999999999999999999999999999999999999885555555


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075        279 RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI  358 (414)
Q Consensus       279 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~  358 (414)
                      ++.+.+.+..++.|++.+...+....   ...+..|+++|++++++.+....+|..++|.+.+.+.+..||++.|++.++
T Consensus        83 ~~~~~~~~~~~l~g~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~  159 (352)
T PF07690_consen   83 SNFWLLLIARFLLGIGSGFFSPASNA---LIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI  159 (352)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred             hhHHHHhhhccccccccccccccccc---cccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence            66667788888999998877655544   466888888999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHHHh
Q psy14075        359 LDFMYAPLLYLL  370 (414)
Q Consensus       359 ~~~~~~~~~~~~  370 (414)
                      ..++..++....
T Consensus       160 ~~~~~~il~~~~  171 (352)
T PF07690_consen  160 LSLIAAILFILF  171 (352)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             hhhhhhhhHhhh
Confidence            888877643333

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.65  E-value=1.7e-14  Score=136.10  Aligned_cols=171  Identities=14%  Similarity=0.127  Sum_probs=143.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy14075        195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM  274 (414)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~  274 (414)
                      +......++...+.+....++|.|++++.|.|+.+.|+..+...+...+.+++.|+++||++||+.+..+..+..++.+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~   92 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT   92 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence            44456677777778888889999998889999999999999999999999999999999999999999999999999888


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHH
Q psy14075        275 IPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLF  354 (414)
Q Consensus       275 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~  354 (414)
                      +...++.+.+.+..++.|++.+...+...   +...+..|+++|+++.|+.+...++|..+||.+.|.+. ..||++.|+
T Consensus        93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~  168 (400)
T PRK11646         93 MAIAHEPWLLWLSCILSGLGGTLFDPPRT---ALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCA  168 (400)
T ss_pred             HHHhccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHH
Confidence            88888877777778888887776654443   33567778889999999999999999999999999998 679999999


Q ss_pred             HHHHHHHHHHHHHHH
Q psy14075        355 IIAILDFMYAPLLYL  369 (414)
Q Consensus       355 ~~~~~~~~~~~~~~~  369 (414)
                      +.++..++..++...
T Consensus       169 ~~~~~~~~~~i~~~~  183 (400)
T PRK11646        169 TGAVLFVLAAAFNAW  183 (400)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            887776665544333

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.63  E-value=1.4e-14  Score=136.27  Aligned_cols=171  Identities=20%  Similarity=0.342  Sum_probs=140.7

Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075        196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI  275 (414)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~  275 (414)
                      ...................+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+..
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~   87 (385)
T TIGR00710         9 LLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL   87 (385)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence            33334444455666666777776554 89999999999999999999999999999999999999999999999988888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075        276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFI  355 (414)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~  355 (414)
                      ...++.+...+..++.|++.+...+....   ...|..|+++|+++.++.+....+|..++|.+.+.+.+..||+..|.+
T Consensus        88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~  164 (385)
T TIGR00710        88 ALSNNIETLLVLRFVQAFGASAGSVISQA---LVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF  164 (385)
T ss_pred             HHHccHHHHHHHHHHHHcchhHHHHHHHH---HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence            88888888888888888888777554443   466778889999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHHHHHHh
Q psy14075        356 IAILDFMYAPLLYLL  370 (414)
Q Consensus       356 ~~~~~~~~~~~~~~~  370 (414)
                      .++..++..+.....
T Consensus       165 ~~~~~~~~~~~~~~~  179 (385)
T TIGR00710       165 LSLAGILLSALIFFI  179 (385)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            877777666555443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00889 2A0110 nucleoside transporter

Probab=99.63  E-value=1.2e-14  Score=137.84  Aligned_cols=162  Identities=18%  Similarity=0.245  Sum_probs=136.7

Q ss_pred             hhhhhhhcCCc--------chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh----hHHHH
Q psy14075         19 ENRHKYLMGET--------KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVL   86 (414)
Q Consensus        19 ~~~~~~~g~s~--------~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l   86 (414)
                      |.+.++.|.++        ++.+...+...++..++.++.|+++||+|||+++..+.++.+++..+.....    +++.+
T Consensus       232 ~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l  311 (418)
T TIGR00889       232 NGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALL  311 (418)
T ss_pred             HHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHH
Confidence            34455666443        5679999999999999999999999999999999999999998877776632    34667


Q ss_pred             HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHH-HHHhhhhhhchhhhhHhhhh------cCChhHHHHHHHH
Q psy14075         87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQF------VGKTAPFLILSAL  159 (414)
Q Consensus        87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~l~~~------~gw~~~f~~~~~~  159 (414)
                      ++.+++.|++.+...+....++.|++| +++|++++|+.+ ...++|..+||+++|.+.++      +||+..|.+.+++
T Consensus       312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p-~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~  390 (418)
T TIGR00889       312 FLSMIVYGCAFDFFNISGSVFVEKEVP-VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGY  390 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence            788999999999988998899999999 499999999997 67899999999999999987      4699999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCCC
Q psy14075        160 ALGDGLLQLLLLQPGVVKQEVE  181 (414)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~  181 (414)
                      .++..++.+++.+|++++.|.+
T Consensus       391 ~~i~~~l~~~~~~~~~~~~~~~  412 (418)
T TIGR00889       391 IAILAVLFMIFFKYSHNAIKVD  412 (418)
T ss_pred             HHHHHHHHHHHhCCcccCCCCc
Confidence            8888888888887765554443

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.63  E-value=4.4e-14  Score=133.04  Aligned_cols=153  Identities=13%  Similarity=0.160  Sum_probs=131.2

Q ss_pred             hhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy14075        210 MLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNA  289 (414)
Q Consensus       210 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  289 (414)
                      .....+|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||+.+..+.++.+++.+...+.++.+.+++..+
T Consensus        38 ~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~  116 (394)
T PRK10213         38 LPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRA  116 (394)
T ss_pred             HHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHH
Confidence            444467776554 8999999999999999999999999999999999999999999999998888888888888888889


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075        290 GLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  366 (414)
                      +.|++.+...+.....   ..|..|+++|+++.++.....++|..++|.+.+.+.+.+||++.|++.+.+.++..+.
T Consensus       117 l~G~~~g~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~  190 (394)
T PRK10213        117 CLGLALGGFWAMSASL---TMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW  190 (394)
T ss_pred             HHHHhhHHHHHHHHHH---HHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence            9999988876654443   5677888999999999999999999999999999999999999999887666554433

>PRK03545 putative arabinose transporter; Provisional

Probab=99.63  E-value=3.1e-14  Score=134.17  Aligned_cols=172  Identities=13%  Similarity=0.075  Sum_probs=137.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      ++.+.+..+............+|.+.+ ++|.++.+.++..+...++..++.+..|++.||+|||+.+..+..+..++.+
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~   89 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSDIAQ-SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHV   89 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHHHHh-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence            333334333333333334445676544 5899999999999999999999999999999999999999999999999988


Q ss_pred             HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075        274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML  353 (414)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~  353 (414)
                      ...+.++.+.+.+..++.|++.+...+...   +...+..|+++|+++.|+......+|..++|++.+.+.+..||++.|
T Consensus        90 ~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~---~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f  166 (390)
T PRK03545         90 LSALAWNFTVLLISRIGIAFAHAIFWSITA---SLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF  166 (390)
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence            888888888888887888877776644333   34567778899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy14075        354 FIIAILDFMYAPLLYL  369 (414)
Q Consensus       354 ~~~~~~~~~~~~~~~~  369 (414)
                      ++.+++.++..+....
T Consensus       167 ~~~~~~~~l~~~~~~~  182 (390)
T PRK03545        167 LAIGGGALITLLLLIK  182 (390)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9988877666554444

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.63  E-value=2.5e-14  Score=138.43  Aligned_cols=181  Identities=10%  Similarity=0.131  Sum_probs=139.0

Q ss_pred             hhhccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHH
Q psy14075        186 KSLVMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALL  263 (414)
Q Consensus       186 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~  263 (414)
                      .+.+|+| .++..++..++..++++....+++.|+++++|++..+++..............++.|+++|| +|||+.+..
T Consensus        14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~   93 (500)
T PRK09584         14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML   93 (500)
T ss_pred             hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence            4555776 47788888888889999999999999999999999888877776665555556789999999 599999999


Q ss_pred             HHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc--chhhHHhHHHHHHHHHHhHHHHHH
Q psy14075        264 GLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA--VYGSVYAIGDVAFCLGFAIGPAMS  340 (414)
Q Consensus       264 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~  340 (414)
                      +.++..++..++.+.+ +.+.+.+...+.|++.|...+...+.   ..+.+|++  .+..+.++.+...++|..++|.+.
T Consensus        94 g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l---~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~  170 (500)
T PRK09584         94 GAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSL---LSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT  170 (500)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHH---HHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence            9999998887777754 33444455667778777765544443   44555433  345678888999999999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy14075        341 GTLVNTIGFEWMLFIIAILDFMYAPLLYL  369 (414)
Q Consensus       341 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  369 (414)
                      |++.+..||++.|.+.++..+++.+....
T Consensus       171 g~l~~~~g~~~~F~i~~i~~~i~~i~~~~  199 (500)
T PRK09584        171 PWLAAKYGWSVAFALSVVGMLITVVNFAF  199 (500)
T ss_pred             HHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999887665665544433

>TIGR00895 2A0115 benzoate transport

Probab=99.63  E-value=5.2e-15  Score=139.64  Aligned_cols=163  Identities=21%  Similarity=0.377  Sum_probs=131.6

Q ss_pred             HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI  281 (414)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  281 (414)
                      +.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++....++.
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~  105 (398)
T TIGR00895        27 LMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNV  105 (398)
T ss_pred             HHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccch
Confidence            33334444555566665544 89999999999999999999999999999999999999999999888888888888887


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy14075        282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDF  361 (414)
Q Consensus       282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~  361 (414)
                      +...+..++.|++.+...+...   +...|..|+++|+++.++.+....+|..++|.+.+.+.+..||+..+.+.+++..
T Consensus       106 ~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~  182 (398)
T TIGR00895       106 TQLLILRFLAGLGLGGLMPNLN---ALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPL  182 (398)
T ss_pred             HHHHHHHHHHhcccccchhhHH---HHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHH
Confidence            7777778888888776655444   3466778888999999999999999999999999999999999999988765555


Q ss_pred             HHHHHHH
Q psy14075        362 MYAPLLY  368 (414)
Q Consensus       362 ~~~~~~~  368 (414)
                      +..++..
T Consensus       183 ~~~~~~~  189 (398)
T TIGR00895       183 LLLLLLM  189 (398)
T ss_pred             HHHHHHH
Confidence            5444433

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.63  E-value=2.4e-14  Score=135.94  Aligned_cols=178  Identities=13%  Similarity=0.103  Sum_probs=138.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh-hhHHHHHHHHHHHH
Q psy14075        191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM-GRYLAALLGLLIIG  269 (414)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~  269 (414)
                      .+.++......+...+.++++..++|.|+++.+|+++.+++.....+.....++.+++|+++||+ |||+.+.++.++..
T Consensus         8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~   87 (493)
T PRK15462          8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMA   87 (493)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHH
Confidence            34566667777777888899999999999998999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHHhhhhhh-hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc--chhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075        270 ICLMMIPLARN-INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA--VYGSVYAIGDVAFCLGFAIGPAMSGTLVNT  346 (414)
Q Consensus       270 i~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~  346 (414)
                      ++.+++...++ .....+...+..++.|...+...+   ...|.+|++  +|.+++++.+...++|+.++|.+.|++.+.
T Consensus        88 lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~a---lv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~  164 (493)
T PRK15462         88 IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSC---LLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE  164 (493)
T ss_pred             HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHH---HHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh
Confidence            88776654321 122333333444555555443333   356767654  688999999999999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        347 IGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       347 ~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      .||+..|...++..+++.+..+..+
T Consensus       165 ~Gw~~~F~iaaigm~l~li~~~~~~  189 (493)
T PRK15462        165 YSWAMGFGLAAVGMIAGLVIFLCGN  189 (493)
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999987776666655554433

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.62  E-value=4.8e-14  Score=133.46  Aligned_cols=169  Identities=15%  Similarity=0.185  Sum_probs=137.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      +....+..+...+.........|.+ ++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+.+++.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~   92 (405)
T TIGR00891        14 FSAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTL   92 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence            3444555555566666666667765 455899999999999999999999999999999999999999999999988888


Q ss_pred             HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--hHH
Q psy14075        274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--FEW  351 (414)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~  351 (414)
                      ...+.++.+.+....++.|++.+...+...   ....|..|+++|+++.++.+....+|..+++.+.+.+.+..+  |++
T Consensus        93 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~  169 (405)
T TIGR00891        93 ACGFAPGYITMFIARLVIGIGMGGEYGSSA---AYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRA  169 (405)
T ss_pred             HHHHhccHHHHHHHHHHHHhhhhhhhHHHH---HHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence            888888888888888888988887755443   346688888999999999999999999999999999988776  999


Q ss_pred             HHHHHHHHHHHHHHH
Q psy14075        352 MLFIIAILDFMYAPL  366 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~  366 (414)
                      .|.+.++..++....
T Consensus       170 ~f~~~~~~~~~~~~~  184 (405)
T TIGR00891       170 LFFISILPIIFALWL  184 (405)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            888765555544433

>PRK10504 putative transporter; Provisional

Probab=99.61  E-value=4.1e-14  Score=136.81  Aligned_cols=176  Identities=15%  Similarity=0.211  Sum_probs=147.6

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      +.++...+..++.......+..++|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~   88 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG   88 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence            456777777777777778888899998876 8999999999999999999999999999999999999999888888888


Q ss_pred             HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075        272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW  351 (414)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~  351 (414)
                      .+...+.++.+.+++..++.|++.+...+....   ...+..|+++|+++.|+.+....+|..++|.+.|.+.+..||++
T Consensus        89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~  165 (471)
T PRK10504         89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRL---TVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHW  165 (471)
T ss_pred             HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHH---HHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHH
Confidence            777777777777788888899988887554433   35677888899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q psy14075        352 MLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~  371 (414)
                      .|.+...+..+..+......
T Consensus       166 ~f~~~~~~~~l~~~~~~~~~  185 (471)
T PRK10504        166 IFLINIPVGIIGAIATLMLM  185 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHhC
Confidence            99988777666655554443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.61  E-value=2.9e-14  Score=135.10  Aligned_cols=171  Identities=13%  Similarity=0.085  Sum_probs=138.6

Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075        196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI  275 (414)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~  275 (414)
                      ...+.+.+............| .+++++|.+..+.++..+...++..++.+..|++.||+|||+.+..+.++.+++.+..
T Consensus        12 ~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~   90 (412)
T TIGR02332        12 FLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTAT   90 (412)
T ss_pred             HHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence            334444444444555555556 5667799999999999999999999999999999999999999999999999999888


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh------hhch
Q psy14075        276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN------TIGF  349 (414)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~------~~g~  349 (414)
                      .+.++.+.+.+.-++.|++.+...+...   ....|.+|+++|+++.++.+....+|..+++.+.+++.+      ..||
T Consensus        91 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~---~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gw  167 (412)
T TIGR02332        91 MFATGPESLYLLRILVGIAEAGFLPGIL---LYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGW  167 (412)
T ss_pred             HHhcCHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence            8888888888888899999887754333   346788889999999999999999999999999998874      3689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHh
Q psy14075        350 EWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      ++.|.+.++..++..++.+++
T Consensus       168 r~~f~~~~~~~l~~~~~~~~~  188 (412)
T TIGR02332       168 QWLFLLEGFPSVILGVMTWFW  188 (412)
T ss_pred             hHHHHHHHHHHHHHHHHHhhc
Confidence            999999877766655444433

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.61  E-value=6.4e-15  Score=140.06  Aligned_cols=185  Identities=21%  Similarity=0.194  Sum_probs=144.4

Q ss_pred             hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHH
Q psy14075        184 TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALL  263 (414)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~  263 (414)
                      +++.+.|+|.++......++..+........+|.+.++ .+.++.+.|+..+...++..+++++.|+++||++||+.+..
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~   87 (417)
T PRK10489          9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL   87 (417)
T ss_pred             HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence            45556678888877777778888878888888988776 57799999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHH
Q psy14075        264 GLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPA  338 (414)
Q Consensus       264 ~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~  338 (414)
                      +..+.+++.+.+..     .++.+.+.+..++.|++.+...+...   ....+..|+++++++.++.+...++|..+||.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  164 (417)
T PRK10489         88 ARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALL---AATPALVGRENLMQAGAITMLTVRLGSVISPA  164 (417)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHh---hhhhhccCHHHHHHHHHHHHHHHhHHHHhHHH
Confidence            77776666554432     33455555666677777666544333   33557777888999999999999999999999


Q ss_pred             HHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        339 MSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       339 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +.|.+.+..||++.|.+.++..++..+..+..++
T Consensus       165 l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  198 (417)
T PRK10489        165 LGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA  198 (417)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999998877776666555544443

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.61  E-value=4.8e-14  Score=132.39  Aligned_cols=173  Identities=14%  Similarity=0.092  Sum_probs=144.7

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      +.++...+..+............+|.+.++ +|.+..+.++..+...++..+++++.|++.||+|||+.+..+..+.+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~   81 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG   81 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence            445666666666677777777888886554 8999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075        272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW  351 (414)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~  351 (414)
                      .++..+.++.+.+.+..++.|++.+...+....   ...+..|+++|+++.+.......++..++|.+.+.+.+..||++
T Consensus        82 ~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~  158 (382)
T PRK10091         82 NAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAI---VLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRY  158 (382)
T ss_pred             HHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHH---HHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHH
Confidence            999989999988888888999988876554333   34566777888999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy14075        352 MLFIIAILDFMYAPLLY  368 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~~~  368 (414)
                      .|.+.++..++..+..+
T Consensus       159 ~f~~~~~~~~~~~~~~~  175 (382)
T PRK10091        159 TFLLIAVFNIAVLASIY  175 (382)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99998877666554433

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.61  E-value=1e-14  Score=137.38  Aligned_cols=159  Identities=20%  Similarity=0.234  Sum_probs=134.4

Q ss_pred             HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy14075        209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN  288 (414)
Q Consensus       209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  288 (414)
                      ..+....|. +++++|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+...+.++.+.+.+..
T Consensus        11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (399)
T TIGR00893        11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILR   89 (399)
T ss_pred             HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            344444555 5566899999999999999999999999999999999999999999999988888888888888888888


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075        289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~  368 (414)
                      ++.|++.+...+...   ....|..|+++|++++++.+....+|..++|.+.+.+.+..+|++.|.+.++..++..+...
T Consensus        90 ~l~g~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  166 (399)
T TIGR00893        90 VLLGAAEAPFFPGII---LIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWL  166 (399)
T ss_pred             HHHHHHHHhhhhHHH---HHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh
Confidence            899999887755444   34668888899999999999999999999999999999999999999988877776665554


Q ss_pred             Hhc
Q psy14075        369 LLR  371 (414)
Q Consensus       369 ~~~  371 (414)
                      ...
T Consensus       167 ~~~  169 (399)
T TIGR00893       167 KFI  169 (399)
T ss_pred             hee
Confidence            443

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.60  E-value=6e-14  Score=132.65  Aligned_cols=170  Identities=16%  Similarity=0.183  Sum_probs=136.5

Q ss_pred             ccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075        189 VMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII  268 (414)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~  268 (414)
                      ..++++....+..++...........+|.++++++|.|+.+.|+..+...++..+++++.|+++||+|||+++..+..+.
T Consensus        12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~   91 (399)
T PRK05122         12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC   91 (399)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence            34567777888888888888888889999988889999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHhhhh---h-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH
Q psy14075        269 GICLMMIPLA---R-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS  340 (414)
Q Consensus       269 ~i~~~~~~~~---~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~  340 (414)
                      +++.+.....   +     +.+.+++..++.|++.+...+...   ....+..|+++|+++.++......+|..+||.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~  168 (399)
T PRK05122         92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSI---LWGIGRVGALHTGRVISWNGIATYGALAIGAPLG  168 (399)
T ss_pred             HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHH---HHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence            7654443322   2     233455666778888776644433   3355777888999999998888899999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHH
Q psy14075        341 GTLVNTIGFEWMLFIIAILDF  361 (414)
Q Consensus       341 g~l~~~~g~~~~~~~~~~~~~  361 (414)
                      +.+.+..||+..+.+..+..+
T Consensus       169 ~~l~~~~g~~~~~~~~~~~~~  189 (399)
T PRK05122        169 VLLYHWGGLAGLGLLIMLLAL  189 (399)
T ss_pred             HHHHHcccHHHHHHHHHHHHH
Confidence            999999999988776655443

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.60  E-value=1.2e-13  Score=131.03  Aligned_cols=176  Identities=21%  Similarity=0.314  Sum_probs=140.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc-----hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHH
Q psy14075        191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ-----QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGL  265 (414)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~  265 (414)
                      ++.+....+..++..........++|.+.++ +|.+..+     .+...+...+...++.++.|+++||++||+.+..+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~   91 (408)
T PRK09874         13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA   91 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH
Confidence            3445556666777777777888899998876 7888654     378888899999999999999999999999999998


Q ss_pred             HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075        266 LIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN  345 (414)
Q Consensus       266 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~  345 (414)
                      .+..++.+.+...++.+.+.+..++.|++.+.. +   .......+..|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~  167 (408)
T PRK09874         92 LGMGIVMVLMGLAQNIWQFLILRALLGLLGGFV-P---NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD  167 (408)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhH-H---hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888887777778777777777777764432 2   222345677888899999999999999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        346 TIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       346 ~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ..+|+..|.+.+++.++..+......
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (408)
T PRK09874        168 SYGLRPVFFITASVLFLCFLVTLFCI  193 (408)
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988877776665554443

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.60  E-value=8e-14  Score=130.14  Aligned_cols=167  Identities=13%  Similarity=0.158  Sum_probs=133.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075        193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL  272 (414)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~  272 (414)
                      .++..++..+...........+.|.++++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++..++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~   81 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC   81 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence            35566666777777777888888977888899999999999999999999999999999999999999999999999998


Q ss_pred             HHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-----
Q psy14075        273 MMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-----  346 (414)
Q Consensus       273 ~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----  346 (414)
                      +...+.+ +.+.+.+..++.|++.+.. .   +......+..|+++|+++.++.....++|..+++.+.+.+.+.     
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-~---~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~  157 (366)
T TIGR00886        82 LWAGLAVQSYSVLLLLRLFIGIAGGSF-A---SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGA  157 (366)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHhchhh-H---hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcc
Confidence            8888888 8777777777778774433 2   2334567888889999999999888888888888888777653     


Q ss_pred             -----hchHHHH-HHHHHHHHHH
Q psy14075        347 -----IGFEWML-FIIAILDFMY  363 (414)
Q Consensus       347 -----~g~~~~~-~~~~~~~~~~  363 (414)
                           .+|++.| ...+++..+.
T Consensus       158 ~~~~~~~w~~~~~~~~~~~~~~~  180 (366)
T TIGR00886       158 GLPAHLAWGWAFVIVPAGILLLP  180 (366)
T ss_pred             cccccccccchhHHHHHHHHHHH
Confidence                 3788888 3334443333

>PRK12382 putative transporter; Provisional

Probab=99.59  E-value=1.2e-13  Score=130.30  Aligned_cols=167  Identities=17%  Similarity=0.244  Sum_probs=131.0

Q ss_pred             cChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHH
Q psy14075        190 MDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIG  269 (414)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~  269 (414)
                      .++.++...+..++...........+|.++++++|.|+.+.|+..+...++..+++++.|+++||+|||+.+..+.+...
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~   92 (392)
T PRK12382         13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACG   92 (392)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHH
Confidence            34556666666667777777778889988888899999999999999999999999999999999999999988877766


Q ss_pred             HHHHHhh---h-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075        270 ICLMMIP---L-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG  341 (414)
Q Consensus       270 i~~~~~~---~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g  341 (414)
                      ++.+...   .     .++.+.+.+..++.|++.+...+...   +...+..|+++|+++++.......+|..++|.+.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~  169 (392)
T PRK12382         93 LAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGAL---TWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGL  169 (392)
T ss_pred             HHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHH
Confidence            5543221   1     23555666777788888776644333   34557778899999999999999999999999999


Q ss_pred             HHHhhhchHHHHHHHHHH
Q psy14075        342 TLVNTIGFEWMLFIIAIL  359 (414)
Q Consensus       342 ~l~~~~g~~~~~~~~~~~  359 (414)
                      .+.+..||+..+.+..+.
T Consensus       170 ~l~~~~g~~~~~~~~~~~  187 (392)
T PRK12382        170 LLHSHFGFAALALTTMVL  187 (392)
T ss_pred             HHHhccChHHHHHHHHHH
Confidence            999999998766654433

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.59  E-value=1.1e-13  Score=134.22  Aligned_cols=173  Identities=16%  Similarity=0.136  Sum_probs=143.2

Q ss_pred             HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy14075        195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM  274 (414)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~  274 (414)
                      ..+++..++...-.......+|.+..+ +|.+..+.++..+.+.++..++.+..|+++||+|||+.+..+..+..++.+.
T Consensus         9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~   87 (495)
T PRK14995          9 VIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLA   87 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            345556666666667777788987655 8999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075        275 IPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML  353 (414)
Q Consensus       275 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~  353 (414)
                      ....++.+.+++.-++.|++.+...+.....   ..+.+ |+++|+++.|+......+|..+||.+.|.+.++.||++.|
T Consensus        88 ~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~---l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f  164 (495)
T PRK14995         88 AAFSPTASWLIATRALLAIGAAMIVPATLAG---IRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVF  164 (495)
T ss_pred             HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHH
Confidence            9998998888888888999888765433322   33443 5788999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q psy14075        354 FIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~  371 (414)
                      ++...+.++..++..+..
T Consensus       165 ~i~~~~~~~~~~l~~~~l  182 (495)
T PRK14995        165 LINVPIVLVVMGLTARYV  182 (495)
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            988777666655554443

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.59  E-value=9.3e-15  Score=136.89  Aligned_cols=167  Identities=14%  Similarity=0.196  Sum_probs=134.9

Q ss_pred             HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI  281 (414)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  281 (414)
                      ++.......+....|. +.+.+|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..++.++..+.++.
T Consensus         5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~   83 (379)
T TIGR00881         5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL   83 (379)
T ss_pred             hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH
Confidence            3444445555566675 555689999999999999999999999999999999999999999999999998888888888


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHH-HHHHHHHhhhchHHHHHHHHHHH
Q psy14075        282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGP-AMSGTLVNTIGFEWMLFIIAILD  360 (414)
Q Consensus       282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~-~~~g~l~~~~g~~~~~~~~~~~~  360 (414)
                      +...+..++.|++.+...+...+   ...+..|+++|+++.++.+....+|..++| .+.+.+.+..+|+..|.+.+++.
T Consensus        84 ~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (379)
T TIGR00881        84 WVMAALWALNGIFQGMGWPPCGR---TVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA  160 (379)
T ss_pred             HHHHHHHHHHHhhccccCCchHH---HHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence            88888888888888777555443   466778888899999999999999999999 46666777788999998887776


Q ss_pred             HHHHHHHHHhcC
Q psy14075        361 FMYAPLLYLLRN  372 (414)
Q Consensus       361 ~~~~~~~~~~~~  372 (414)
                      ++..+..+...+
T Consensus       161 ~~~~~~~~~~~~  172 (379)
T TIGR00881       161 IIVSLICFLLLR  172 (379)
T ss_pred             HHHHHHHheeeC
Confidence            665555444433

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.59  E-value=6.8e-14  Score=134.70  Aligned_cols=177  Identities=10%  Similarity=0.139  Sum_probs=142.1

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLGLLIIGI  270 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~i  270 (414)
                      |.++......+...++++....+++.|+++.+|.+..++++....+.....+..+++|+++|| +|||+++..+.++..+
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~   93 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI   93 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence            456666777778889999999999999999999999999888888887888888899999999 9999999999999999


Q ss_pred             HHHHhhhhhhhHH-HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc--chhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075        271 CLMMIPLARNINH-LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA--VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI  347 (414)
Q Consensus       271 ~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  347 (414)
                      +.+.+.+..+... +.+...+.+++.|...+...+.   ..|.+|++  +|++++++.....++|..+||.+.|++.++.
T Consensus        94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~l---i~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~  170 (489)
T PRK10207         94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASL---LSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF  170 (489)
T ss_pred             HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHH---HHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9888877654333 3356667788887776655544   55666655  4577899999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        348 GFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       348 g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ||++.|++.++..+++.+.....+
T Consensus       171 gw~~~F~i~~i~~~~~~~~~~~~~  194 (489)
T PRK10207        171 GYSVTYNLCGAGLIIALLVYFACR  194 (489)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHcc
Confidence            999999887665555444444443

>PRK03699 putative transporter; Provisional

Probab=99.58  E-value=2.3e-13  Score=128.33  Aligned_cols=171  Identities=13%  Similarity=0.087  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      ++...+..++.......+...+|.+.+ ++|.|..+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+
T Consensus         9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~   87 (394)
T PRK03699          9 TWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVA   87 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            444455555555555666677787655 5899999999999999999999999999999999999999999998888888


Q ss_pred             HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchHHH
Q psy14075        274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFEWM  352 (414)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~~~  352 (414)
                      +..+.++.+.+.+..++.|++.+...+....   ...+..|+++|+.+.+..+....+|+.++|.+.+.+.+ ..||++.
T Consensus        88 l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~---~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~  164 (394)
T PRK03699         88 GLMFSHSLALFSIAMFVLGVVSGITMSIGTF---LITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWV  164 (394)
T ss_pred             HHHHcchHHHHHHHHHHHHHhhHhhccchhH---HhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence            8888888877777788888888776554433   35677788889999999888888999999999998875 4689999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy14075        353 LFIIAILDFMYAPLLY  368 (414)
Q Consensus       353 ~~~~~~~~~~~~~~~~  368 (414)
                      |...++..++..++.+
T Consensus       165 f~~~~~~~~~~~~~~~  180 (394)
T PRK03699        165 YACIGLVYVAIFILTL  180 (394)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9887776666544433

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.58  E-value=1.1e-13  Score=130.47  Aligned_cols=175  Identities=16%  Similarity=0.221  Sum_probs=140.1

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      |.........+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~   81 (392)
T PRK10473          3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIA   81 (392)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHH
Confidence            333444445555556666666778886655 7999999999999999999999999999999999999999999999888


Q ss_pred             HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075        272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW  351 (414)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~  351 (414)
                      .+.....++.+...+..++.|++.+...+...   ....|..|+++|+++.++.+....++..++|.+.+.+.+..||+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~  158 (392)
T PRK10473         82 SLLCSLAETSSLFLAGRFLQGIGAGCCYVVAF---AILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQS  158 (392)
T ss_pred             HHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH
Confidence            88888877777777777777887776644333   346677888999999999999999999999999999888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q psy14075        352 MLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~  370 (414)
                      .|++.+++.++..++....
T Consensus       159 ~~~~~~~~~~i~~~~~~~~  177 (392)
T PRK10473        159 LFYTMAAMGILVLLLSLFI  177 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9988887777666554443

>PRK11043 putative transporter; Provisional

Probab=99.58  E-value=1.5e-13  Score=129.93  Aligned_cols=161  Identities=16%  Similarity=0.212  Sum_probs=129.4

Q ss_pred             HhhhhchHHH--HHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075        209 AMLEPSLPIW--MMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV  286 (414)
Q Consensus       209 ~~~~~~~~~~--~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  286 (414)
                      .....+.|.+  +++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+.+.+
T Consensus        20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~   99 (401)
T PRK11043         20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLV   99 (401)
T ss_pred             HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            3334444443  45568999999999999999999999999999999999999999999888888888888888777777


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075        287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  366 (414)
                      ..++.|++.+...+...   +...+.++++++++..+..+....++..++|.+.+++.+..||+..|.+.+++.++..+.
T Consensus       100 ~~~l~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~  176 (401)
T PRK11043        100 LRFVQAVGVCSAAVIWQ---ALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP  176 (401)
T ss_pred             HHHHHHhhhHHHHHHHH---HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence            77777777665543322   345677888888889998888889999999999999999999999998887777776655


Q ss_pred             HHHhcC
Q psy14075        367 LYLLRN  372 (414)
Q Consensus       367 ~~~~~~  372 (414)
                      .+..++
T Consensus       177 ~~~~~~  182 (401)
T PRK11043        177 TLRLKP  182 (401)
T ss_pred             HHHcCC
Confidence            555443

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.58  E-value=1.3e-13  Score=130.67  Aligned_cols=167  Identities=16%  Similarity=0.235  Sum_probs=135.3

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA  278 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~  278 (414)
                      ...++............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+...+.
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~  100 (406)
T PRK11551         22 LVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA  100 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh
Confidence            34444444455556666766554 89999999999999999999999999999999999999999988888888777788


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075        279 RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI  358 (414)
Q Consensus       279 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~  358 (414)
                      ++.+.+.+..++.|++.+...+...   ....|..|+++|++++++.+....+|..+++.+.+.+.+..+|+..|++.++
T Consensus       101 ~~~~~~~~~~~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (406)
T PRK11551        101 WDFPSLLVARLLTGVGLGGALPNLI---ALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGV  177 (406)
T ss_pred             ccHHHHHHHHHHHHhhHHHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence            8888888888888888887654444   3466778889999999999999999999999999888888899999988776


Q ss_pred             HHHHHHHHHHH
Q psy14075        359 LDFMYAPLLYL  369 (414)
Q Consensus       359 ~~~~~~~~~~~  369 (414)
                      +.++..+....
T Consensus       178 ~~~~~~~~~~~  188 (406)
T PRK11551        178 GPLLLVPLLMR  188 (406)
T ss_pred             HHHHHHHHHHH
Confidence            65555544443

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.58  E-value=6.7e-14  Score=135.87  Aligned_cols=173  Identities=17%  Similarity=0.259  Sum_probs=144.7

Q ss_pred             HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy14075        195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM  274 (414)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~  274 (414)
                      ....+..++............|.+.++ +|.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~   83 (485)
T TIGR00711         5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLL   83 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence            344455555666666677778876665 8999999999999999999999999999999999999999999999999888


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHH
Q psy14075        275 IPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLF  354 (414)
Q Consensus       275 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~  354 (414)
                      ....++.+.+.+..++.|++.+...+...   ....|..|+++|+++.++.+....+|..++|.+.+++.++.||++.|+
T Consensus        84 ~~~~~~~~~l~~~~~~~G~~~~~~~~~~~---~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~  160 (485)
T TIGR00711        84 CGVAPNLELMIIFRVIQGFGGGPLIPLSF---STLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL  160 (485)
T ss_pred             HhCcCCHHHHHHHHHHHHhhhhhHHHHHH---HHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence            88888888888888888988887755444   346688888999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy14075        355 IIAILDFMYAPLLYLLR  371 (414)
Q Consensus       355 ~~~~~~~~~~~~~~~~~  371 (414)
                      +.+.+.++..++..+..
T Consensus       161 ~~~~~~~~~~~~~~~~~  177 (485)
T TIGR00711       161 INVPIGIIVVVVAFFIL  177 (485)
T ss_pred             hhhHHHHHHHHHHHHHc
Confidence            88777666655554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.58  E-value=1.3e-13  Score=131.26  Aligned_cols=185  Identities=16%  Similarity=0.164  Sum_probs=130.0

Q ss_pred             hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075        187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL  266 (414)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  266 (414)
                      ..+|+|++|...+..++...+......++|.|+++++|+++.+.|+..+...++..+++++.|+++||+|||+.+..+..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~   84 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS   84 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence            45678899998888888888888889999999999899999999999999999999999999999999999998877655


Q ss_pred             HHHHHHHHhhh---hhhhH-HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075        267 IIGICLMMIPL---ARNIN-HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT  342 (414)
Q Consensus       267 ~~~i~~~~~~~---~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~  342 (414)
                      +..++...+..   .+... .......+.++..+.......+......+..+ +.++..+|..+....+|..++|.+.|.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~~~~~g~  163 (420)
T PRK09528         85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS-RRSGFEYGRARMWGSLGWALCAFIAGI  163 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH-hhccccchhhHHhhhHHHHHHHHHHHH
Confidence            55443322111   11100 11111222233333332222222222233332 345778888888899999999999999


Q ss_pred             HHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        343 LVNTIGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       343 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      +.+ .+++..|++.++..++..+..+..+++
T Consensus       164 l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~  193 (420)
T PRK09528        164 LFN-INPQINFWLGSGSALILLVLLFFAKPD  193 (420)
T ss_pred             HHh-cCchHhHHHHHHHHHHHHHHHhccccc
Confidence            987 488889988777776665555544433

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.57  E-value=2.2e-13  Score=129.92  Aligned_cols=162  Identities=15%  Similarity=0.171  Sum_probs=132.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      +....+..+.............|. +++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~   98 (426)
T PRK12307         20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTG   98 (426)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence            334444444444555555555555 4455899999999999999999999999999999999999999999999999988


Q ss_pred             HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075        274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML  353 (414)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~  353 (414)
                      ...+.++.+.+.+..++.|++.+...+...   ....|..|+++|+++.++.+....+|..+++.+.+.+.+..||++.|
T Consensus        99 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f  175 (426)
T PRK12307         99 LSGLASGVIMLTLSRFIVGMGMAGEYACAS---TYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAF  175 (426)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHhhHHHHHH---HHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHH
Confidence            888888888888888899988887654433   34668888999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q psy14075        354 FIIAIL  359 (414)
Q Consensus       354 ~~~~~~  359 (414)
                      ++....
T Consensus       176 ~i~~~~  181 (426)
T PRK12307        176 FVGLLP  181 (426)
T ss_pred             HHHHHH
Confidence            875433

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.56  E-value=1.4e-13  Score=129.18  Aligned_cols=160  Identities=19%  Similarity=0.376  Sum_probs=134.7

Q ss_pred             HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075        207 GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV  286 (414)
Q Consensus       207 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  286 (414)
                      +.......+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+.+.+.++.+...+
T Consensus         6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   84 (377)
T PRK11102          6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY   84 (377)
T ss_pred             HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence            334556778887766 7999999999999999999999999999999999999999999999999888888888877777


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075        287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  366 (414)
                      ..++.|++.+...+....   ...+..|+++|+++.++.+....+|..++|.+.+.+.+..||++.|.+.+.+.++..+.
T Consensus        85 ~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  161 (377)
T PRK11102         85 MRFLHGLAAAAASVVINA---LMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAL  161 (377)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence            888888887776554443   45677788899999999999999999999999999999999999998887777666555


Q ss_pred             HHHh
Q psy14075        367 LYLL  370 (414)
Q Consensus       367 ~~~~  370 (414)
                      ....
T Consensus       162 ~~~~  165 (377)
T PRK11102        162 VFFF  165 (377)
T ss_pred             HHHh
Confidence            4433

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.56  E-value=2.1e-13  Score=126.76  Aligned_cols=160  Identities=14%  Similarity=0.040  Sum_probs=124.4

Q ss_pred             HHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q psy14075        206 TGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLI  285 (414)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  285 (414)
                      .....+...+|.+.++ +|.++.+.|+..+.+.++..++++..|+++||+|||+++..+......+.+.....++.+.+.
T Consensus         5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~   83 (368)
T TIGR00903         5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLL   83 (368)
T ss_pred             HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence            3445556667776554 899999999999999999999999999999999999876655544444433223335677778


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075        286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP  365 (414)
Q Consensus       286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~  365 (414)
                      +.-++.|++.+...    +......|..|+++|+++.++.+....+|..+++.+.+++.+..||+..|.+.+++.++..+
T Consensus        84 ~~R~l~G~g~~~~~----~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~  159 (368)
T TIGR00903        84 ACQLLAALGQPFLL----NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII  159 (368)
T ss_pred             HHHHHHHhHhHHHH----HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence            88888888887542    22233467888999999999999999999999999999999999999999998777766655


Q ss_pred             HHHHh
Q psy14075        366 LLYLL  370 (414)
Q Consensus       366 ~~~~~  370 (414)
                      +.++.
T Consensus       160 ~~~~~  164 (368)
T TIGR00903       160 LVLAA  164 (368)
T ss_pred             HHHHH
Confidence            55443

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.56  E-value=5.4e-13  Score=128.71  Aligned_cols=166  Identities=14%  Similarity=0.175  Sum_probs=125.8

Q ss_pred             HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI  281 (414)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  281 (414)
                      ++............|.+ .+.+|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.++..+.++.
T Consensus        46 ~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~  124 (476)
T PLN00028         46 FTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA  124 (476)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH
Confidence            33333344444455554 55589999999999888899999999999999999999999999888888888888888777


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh---------hhchHHH
Q psy14075        282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN---------TIGFEWM  352 (414)
Q Consensus       282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~---------~~g~~~~  352 (414)
                      +.+.+..++.|++.+...    +....+.+.+|+++||++.|+.+...++|..+++.+.+.+.+         ..||++.
T Consensus       125 ~~l~~~r~l~G~~~~~~~----~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~  200 (476)
T PLN00028        125 TGFIAVRFFIGFSLATFV----SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA  200 (476)
T ss_pred             HHHHHHHHHHHHHHHhhH----HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence            777666677777765432    222346688889999999999988888888888777765533         2489999


Q ss_pred             HHHHHHHHHHHHHHHHHhcC
Q psy14075        353 LFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~  372 (414)
                      |.+.+++.++..+..+++.+
T Consensus       201 f~i~g~l~l~~~l~~~~~~~  220 (476)
T PLN00028        201 FFVPGLLHIIMGILVLTLGQ  220 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHcC
Confidence            99988887776665555543

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.56  E-value=1.5e-13  Score=128.69  Aligned_cols=159  Identities=16%  Similarity=0.147  Sum_probs=128.8

Q ss_pred             HHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy14075        208 IAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVP  287 (414)
Q Consensus       208 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  287 (414)
                      .+......|. +++++|.+..+.++..+...++..+++++.|+++||+|||+.+..+..+..++.+...+.++.+.+.+.
T Consensus        19 ~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (377)
T TIGR00890        19 VYTWTLLAPP-LGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLT   97 (377)
T ss_pred             HhhhhhHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555665 455589999999999999999999999999999999999999999999999999888888888888888


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy14075        288 NAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL  367 (414)
Q Consensus       288 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  367 (414)
                      ..+.|++.+...+...+   ...+..| ++|+++.++.+....+|..+++++.+.+.+..||++.|.+.++..++..+..
T Consensus        98 ~~~~g~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  173 (377)
T TIGR00890        98 YGLASAGVGIAYGIALN---TAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLG  173 (377)
T ss_pred             HHHHhHHHHHHHHhHHH---HHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            88888888766443332   2344444 5689999999999899988888888888888899999998888777766655


Q ss_pred             HHhc
Q psy14075        368 YLLR  371 (414)
Q Consensus       368 ~~~~  371 (414)
                      +...
T Consensus       174 ~~~~  177 (377)
T TIGR00890       174 AFLI  177 (377)
T ss_pred             HHhe
Confidence            5443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.56  E-value=2.4e-13  Score=128.85  Aligned_cols=159  Identities=18%  Similarity=0.197  Sum_probs=129.5

Q ss_pred             HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075        207 GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV  286 (414)
Q Consensus       207 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  286 (414)
                      ....+...+|.+. +++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.....++.+.....++.+.+..
T Consensus        28 ~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~  106 (406)
T PRK15402         28 ANDMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTL  106 (406)
T ss_pred             hhhhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence            4455556667655 458999999999999999999999999999999999999999999888888888888888777777


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075        287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  366 (414)
                      ..++.|++.+...+...   ....|..|++++++..++......++..++|.+.+.+.+..+|++.|++.+++.++..+.
T Consensus       107 ~~~l~G~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~  183 (406)
T PRK15402        107 LRFLQGIGLCFIGAVGY---AAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFG  183 (406)
T ss_pred             HHHHHHhHhhhHHHHHH---HHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence            77888887776644333   335577788888899999888888999999999999999999999998888777766554


Q ss_pred             HHH
Q psy14075        367 LYL  369 (414)
Q Consensus       367 ~~~  369 (414)
                      .+.
T Consensus       184 ~~~  186 (406)
T PRK15402        184 LWR  186 (406)
T ss_pred             HHH
Confidence            443

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.55  E-value=4e-13  Score=129.01  Aligned_cols=154  Identities=14%  Similarity=0.190  Sum_probs=115.2

Q ss_pred             hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh----hhHHHHHH
Q psy14075        212 EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR----NINHLIVP  287 (414)
Q Consensus       212 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~  287 (414)
                      ....|. +.+. |.++.+.++..+...++..++.++.|+++||+|||+++..+.++.+++.+.+.+.+    +.+...+.
T Consensus        49 ~~~~p~-l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  126 (452)
T PRK11273         49 ALAMPY-LVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL  126 (452)
T ss_pred             HHhhHH-HHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence            345564 5565 99999999999999999999999999999999999999999988888877776643    44455566


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH-HHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075        288 NAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI-GPAMSGTLVNTIGFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       288 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  366 (414)
                      .++.|++.+...+...   ....+.+|+++|+++.|+.+....+|+.+ +|.+...+....||++.|++.+++.++..++
T Consensus       127 ~~l~gi~~g~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l  203 (452)
T PRK11273        127 LFLCGWFQGMGWPPCG---RTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF  203 (452)
T ss_pred             HHHHHHHHhccchHHH---HHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence            6777877776644333   33567788899999999999988888754 4444333434458999999887776665544


Q ss_pred             HHHh
Q psy14075        367 LYLL  370 (414)
Q Consensus       367 ~~~~  370 (414)
                      .++.
T Consensus       204 ~~~~  207 (452)
T PRK11273        204 AFAM  207 (452)
T ss_pred             HHHH
Confidence            4433

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.55  E-value=3.1e-13  Score=129.31  Aligned_cols=157  Identities=17%  Similarity=0.219  Sum_probs=120.4

Q ss_pred             hhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh----hhhHHHH
Q psy14075        210 MLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA----RNINHLI  285 (414)
Q Consensus       210 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~  285 (414)
                      .+....|. +++ .|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+.....    ++.+.+.
T Consensus        45 ~~~~~~p~-~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  122 (438)
T TIGR00712        45 NFALAMPY-LVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMF  122 (438)
T ss_pred             cHHhhhHH-HHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHH
Confidence            34445554 555 49999999999999999999999999999999999999988888888877666543    2344445


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchHHHHHHHHHHHHHHH
Q psy14075        286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFEWMLFIIAILDFMYA  364 (414)
Q Consensus       286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~~~~~~~~~~~~~~~  364 (414)
                      +..++.|++.+...+...   ..+.+.+|+++|++++|+.+....+|+.++|.+.+...+ ..+|+..|++.+++.++..
T Consensus       123 ~~~~l~g~~~g~~~~~~~---~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~  199 (438)
T TIGR00712       123 VLLFLNGWFQGMGWPPCG---RTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVA  199 (438)
T ss_pred             HHHHHHHHHhhcchHHHH---HHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            555667777766644333   345678888999999999999999999999988876554 4689999999888777765


Q ss_pred             HHHHHhc
Q psy14075        365 PLLYLLR  371 (414)
Q Consensus       365 ~~~~~~~  371 (414)
                      +..++..
T Consensus       200 ~~~~~~~  206 (438)
T TIGR00712       200 LFAFAMM  206 (438)
T ss_pred             HHHHHhc
Confidence            5444433

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.55  E-value=6.4e-13  Score=129.41  Aligned_cols=162  Identities=17%  Similarity=0.220  Sum_probs=133.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      +....+..++..+.........|.+. +++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+.+++.+
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~  100 (496)
T PRK03893         22 FSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL  100 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence            33445555555566666666667654 55899999999999999999999999999999999999999999999999888


Q ss_pred             HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075        274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML  353 (414)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~  353 (414)
                      .+.+.++.+.+.+..++.|++.+...+...   ....|..|+++|+++.++.+....+|..++|.+.+.+.+..+|++.|
T Consensus       101 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f  177 (496)
T PRK03893        101 ACGFAPGYWTLFIARLVIGMGMAGEYGSSA---TYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALF  177 (496)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Confidence            888888888888888888888877654444   34668888999999999999999999999999999999999999998


Q ss_pred             HHHHHH
Q psy14075        354 FIIAIL  359 (414)
Q Consensus       354 ~~~~~~  359 (414)
                      .+....
T Consensus       178 ~~~~~~  183 (496)
T PRK03893        178 FIGILP  183 (496)
T ss_pred             HHHHHH
Confidence            765443

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.54  E-value=4.8e-13  Score=125.94  Aligned_cols=173  Identities=10%  Similarity=0.096  Sum_probs=131.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075        191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI  270 (414)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i  270 (414)
                      +|.++.+.+..++..++........+.+.+ .++.++.+.++..+.+.+...+..++.|+++||+|||+++..+..+.++
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~   80 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLL   80 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHH
Confidence            456677777777777665555555565554 4788888899999999999999999999999999999999999998888


Q ss_pred             HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075        271 CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFE  350 (414)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~  350 (414)
                      +.+.+....+.   .+..++.|++.+...|...+   .+.|..|+++|++++|+.+....++..+||.++|.+.+.. +.
T Consensus        81 ~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a---~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~  153 (393)
T PRK11195         81 GCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYG---ILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AE  153 (393)
T ss_pred             HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH---HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence            76665555443   44556778888877655444   4668888999999999999999999999999999999854 66


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc
Q psy14075        351 WMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      ..+.+.+.+.+++.+....++
T Consensus       154 ~~~~i~~~~~~~~~~~~~~l~  174 (393)
T PRK11195        154 AALAVCALIYLLAALFNLFIP  174 (393)
T ss_pred             HHHHHHHHHHHHHHHHHhcCC
Confidence            666665554444433333333

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.54  E-value=4.6e-13  Score=126.87  Aligned_cols=160  Identities=17%  Similarity=0.182  Sum_probs=131.4

Q ss_pred             HHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q psy14075        206 TGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLI  285 (414)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  285 (414)
                      .........+|.. .+.++.+..+.++..+.+.++..++.++.|+++||+|||+++..+..+..++.+.....++.+.+.
T Consensus        30 ~~~~~~~p~l~~i-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~  108 (413)
T PRK15403         30 LTTDLIQPGIINV-VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFL  108 (413)
T ss_pred             HHHHhhccCHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence            3444455566664 455899999999999999999999999999999999999999999999998888888888888888


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075        286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP  365 (414)
Q Consensus       286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~  365 (414)
                      +..++.|++.+...+..   .....|.+|+++++++.++.+....++..+||.+.+.+.+..||++.|++.++..++..+
T Consensus       109 ~~r~l~Gi~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~  185 (413)
T PRK15403        109 IARFIQGTSICFIATVG---YVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFV  185 (413)
T ss_pred             HHHHHHHHHHHHHHHHH---HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            88888888776543222   233557778888899999999999999999999999999989999999998887777665


Q ss_pred             HHHH
Q psy14075        366 LLYL  369 (414)
Q Consensus       366 ~~~~  369 (414)
                      ..++
T Consensus       186 ~~~~  189 (413)
T PRK15403        186 GLLL  189 (413)
T ss_pred             HHHH
Confidence            5443

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.54  E-value=7.4e-13  Score=125.00  Aligned_cols=167  Identities=14%  Similarity=0.220  Sum_probs=131.8

Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy14075        197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP  276 (414)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~  276 (414)
                      ......+..+........+|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...
T Consensus        13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~   91 (394)
T PRK11652         13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVAL   91 (394)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence            3333444445555555667776655 899999999999999999999999999999999999999999988888888877


Q ss_pred             hhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHH
Q psy14075        277 LARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFII  356 (414)
Q Consensus       277 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~  356 (414)
                      ..++.+.+.+..++.|++.+...+...   ....+..++++++++.+..+....++..++|.+.+.+.+..||+..|.+.
T Consensus        92 ~~~~~~~l~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~  168 (394)
T PRK11652         92 FAHSLTVLIAASAIQGLGTGVGGVMAR---TLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFL  168 (394)
T ss_pred             HHccHHHHHHHHHHHHhhhhHHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHH
Confidence            777877777778888887776543322   23456667778899999999999999999999999999989999999887


Q ss_pred             HHHHHHHHHHH
Q psy14075        357 AILDFMYAPLL  367 (414)
Q Consensus       357 ~~~~~~~~~~~  367 (414)
                      ++..++..+..
T Consensus       169 ~~~~~~~~~~~  179 (394)
T PRK11652        169 LLLGAGVTFSM  179 (394)
T ss_pred             HHHHHHHHHHH
Confidence            77665544433

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.53  E-value=4e-13  Score=125.83  Aligned_cols=168  Identities=15%  Similarity=0.207  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHhhh
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAAL-LGLLIIGICLMMIPL  277 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~i~~~~~~~  277 (414)
                      +..++...+.......+|.|+++++|.|+.+.|+..+...+...+.+++.|+++||+|||+.+. .+.....++.+...+
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~   83 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW   83 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence            4466667777788889999998889999999999999999999999999999999999887654 455555566666677


Q ss_pred             hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhH--HhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075        278 ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV--YAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFI  355 (414)
Q Consensus       278 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~  355 (414)
                      .++.+.+++..++.+.+.+...+...   ....+..|++.|+.+  .+.......+|..++|.+.+.+.+..||++.|++
T Consensus        84 ~~~~~~l~~~~~~~g~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~  160 (375)
T TIGR00899        84 NRNYFLLLVLGVLLSSFASTANPQLF---ALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLT  160 (375)
T ss_pred             cchHHHHHHHHHHHHhhhhhhHHHHH---HHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHH
Confidence            77766655555555554444433222   223344455555543  5777778889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q psy14075        356 IAILDFMYAPLLYL  369 (414)
Q Consensus       356 ~~~~~~~~~~~~~~  369 (414)
                      .+.+.++..+..++
T Consensus       161 ~~~~~~~~~~~~~~  174 (375)
T TIGR00899       161 AALAFVLCGVLVWL  174 (375)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88877766655554

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.52  E-value=8.4e-13  Score=123.97  Aligned_cols=153  Identities=19%  Similarity=0.230  Sum_probs=131.0

Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075        191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI  270 (414)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i  270 (414)
                      ++.++.+....++...........+|.+.++ +|.|..+.|+..+...++..+++++.|+++||+|||+.+..+..+.++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~   83 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA   83 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4557777777888888888888999998886 799999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075        271 CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI  347 (414)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  347 (414)
                      +.+...+.++.+.+.+..++.|++.+...+.....   ..+..++++|+++++..+....+|..+||.+.+.+.+..
T Consensus        84 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~  157 (381)
T PRK03633         84 GCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESA---LMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL  157 (381)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            88888888888888888888898888765543333   345566778999999999999999999999999987753

>TIGR00897 2A0118 polyol permease family

Probab=99.52  E-value=9.1e-13  Score=124.62  Aligned_cols=174  Identities=15%  Similarity=0.126  Sum_probs=128.0

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      +.+....+..++..........+++.++++ +|.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~   91 (402)
T TIGR00897        13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG   91 (402)
T ss_pred             chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence            455566666666667766677788888865 7999999999999999999999999999999999999999988888877


Q ss_pred             HHHhh---hh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH-hHHHHHHHHHHhh
Q psy14075        272 LMMIP---LA-RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF-AIGPAMSGTLVNT  346 (414)
Q Consensus       272 ~~~~~---~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~ig~~~~g~l~~~  346 (414)
                      .+...   .. ++.+.+.+..++.|++.+...+.   ......+..|+++|++++|+.+...++|. .++|.+.+.+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~---~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~  168 (402)
T TIGR00897        92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYS---FLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA  168 (402)
T ss_pred             HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhH---HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            55432   22 34555555666667666544322   22345577788899999999999999996 5899999999988


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHH
Q psy14075        347 IGFEWMLFIIAILDFMYAPLLYL  369 (414)
Q Consensus       347 ~g~~~~~~~~~~~~~~~~~~~~~  369 (414)
                      .|++..++.......+..++..+
T Consensus       169 ~g~~~~~~~~~~~~~~~~~~~~~  191 (402)
T TIGR00897       169 FGEMNTLWSALAFVLTGGVIALF  191 (402)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHh
Confidence            88766555444333333333333

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.52  E-value=1.2e-12  Score=130.29  Aligned_cols=160  Identities=15%  Similarity=0.222  Sum_probs=130.0

Q ss_pred             hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q psy14075        211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAG  290 (414)
Q Consensus       211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  290 (414)
                      +...+|.+ .+.+|.+..+.+++.+...++.+++.++.|+++||+|||+.++++.++.+++.++..+.++.+.+++..++
T Consensus       186 is~ilp~i-~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l  264 (742)
T TIGR01299       186 VGFVLPSA-EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLL  264 (742)
T ss_pred             HHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            44455554 44589999999999999999999999999999999999999999999988888888888888888888899


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-------------chHHHHHHHH
Q psy14075        291 LGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-------------GFEWMLFIIA  357 (414)
Q Consensus       291 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-------------g~~~~~~~~~  357 (414)
                      .|++.+...+...   .++.|..|++.||+..++.+....+|..+++.++..+...+             +|++.+++.+
T Consensus       265 ~G~g~g~~~p~~~---~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~  341 (742)
T TIGR01299       265 SGFGIGGAIPIVF---SYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA  341 (742)
T ss_pred             HHHHHHHHHHHHH---HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHH
Confidence            9999888755444   45778889999999999999999999999998877766543             4778887777


Q ss_pred             HHHHHHHHHHHHhcCCC
Q psy14075        358 ILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       358 ~~~~~~~~~~~~~~~~~  374 (414)
                      +..++.++..+++++.+
T Consensus       342 lp~ll~ll~~~~lPESP  358 (742)
T TIGR01299       342 FPCVFAIGALTFMPESP  358 (742)
T ss_pred             HHHHHHHHHHHHcCCCH
Confidence            76666665555565543

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.52  E-value=1.4e-12  Score=122.85  Aligned_cols=152  Identities=16%  Similarity=0.063  Sum_probs=126.9

Q ss_pred             HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy14075        209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN  288 (414)
Q Consensus       209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  288 (414)
                      ......+|... +++|.|..+.++..+.+.++..++.++.|++.||+|||+++..+..+.+++.+...++++.+.+.+..
T Consensus        26 ~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r  104 (393)
T PRK09705         26 TSVGPLLPQLR-QASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA  104 (393)
T ss_pred             hccchhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence            44556677755 45899999999999999999999999999999999999999999999999999999999999888889


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHH
Q psy14075        289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-GFEWMLFIIAILDFMYAP  365 (414)
Q Consensus       289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~  365 (414)
                      ++.|++.+...+.....   ..+.+| ++|++++|........|..+++.+.+++.++. +|+..+.+.++..++...
T Consensus       105 ~l~Gig~~~~~~~~~~~---~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~  178 (393)
T PRK09705        105 LLGGVGIGIIQAVMPSV---IKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF  178 (393)
T ss_pred             HHHHhHHHHHhhhhhHH---HHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            99999998775544432   445555 67899999999999999999999999998876 799887766555444333

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.52  E-value=1.1e-12  Score=125.84  Aligned_cols=157  Identities=11%  Similarity=0.035  Sum_probs=123.4

Q ss_pred             hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-H
Q psy14075        211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN-A  289 (414)
Q Consensus       211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~  289 (414)
                      +..++|.+.+ .+|.+..+.++..+...+...++.++.|+++||++||+.++.+.++..++.+...+.++.+.++... +
T Consensus        38 ~~~~~~~i~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  116 (455)
T TIGR00892        38 VTVFFKELQQ-IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGF  116 (455)
T ss_pred             hhhhHHHHHH-HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            4445666544 5899999999999998888889999999999999999999999888888888877777766654433 5


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy14075        290 GLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL  369 (414)
Q Consensus       290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  369 (414)
                      +.|++.+...+...   ....+.++ ++|+++.|+.+....+|..++|.+.+.+.+.+||+++|++.+++.++..+..++
T Consensus       117 l~G~~~~~~~~~~~---~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~  192 (455)
T TIGR00892       117 ITGLGLAFNFQPSL---TMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGAL  192 (455)
T ss_pred             HHHhcchhhhhHHH---HHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence            66777765433222   33445554 678999999999999999999999999999999999999998877766555555


Q ss_pred             hcC
Q psy14075        370 LRN  372 (414)
Q Consensus       370 ~~~  372 (414)
                      .++
T Consensus       193 ~~~  195 (455)
T TIGR00892       193 MRP  195 (455)
T ss_pred             hCC
Confidence            443

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.51  E-value=1.1e-12  Score=123.81  Aligned_cols=175  Identities=17%  Similarity=0.249  Sum_probs=124.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075        191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI  270 (414)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i  270 (414)
                      ||.+|......++...+...+..++|.|+++++|.++.+.|...+...+...+++++.|+++||+|||+.+..+.....+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~   80 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV   80 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            57888888888888888889999999999998999999999999999999999999999999999999998876655544


Q ss_pred             HHHHh---hhhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075        271 CLMMI---PLAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT  342 (414)
Q Consensus       271 ~~~~~---~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~  342 (414)
                      +....   ...+     ......+..++.+++.+...+....   ...+. .+ .++..+|......++|..++|.+.|.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~-~~-~~~~~~g~~~~~~~~g~~~g~~~~g~  155 (396)
T TIGR00882        81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA---YIEKV-SR-NSNFEYGKARMFGCVGWALCASIAGI  155 (396)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH---HHHHh-hh-hcccccchhhhhcccHHHHHHHHHhh
Confidence            33221   1111     1111122233444444443332222   22232 22 23456677778888999999999998


Q ss_pred             HHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        343 LVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       343 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      +.+ .+|+..|++.+.+.++..++.+...
T Consensus       156 l~~-~~~~~~f~~~~~~~~~~~~~~~~~~  183 (396)
T TIGR00882       156 LFS-IDPQIVFWLGSGFALILMLLLMFAK  183 (396)
T ss_pred             hhc-cCchHHHHHHHHHHHHHHHHHHHhC
Confidence            866 5999999888877777665554433

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.50  E-value=3.3e-12  Score=120.46  Aligned_cols=177  Identities=16%  Similarity=0.161  Sum_probs=119.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHH-HHHhhhhhhhhhhhhhhhHHHH-HHHHHHH
Q psy14075        191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASI-SYLIGTNLFGPLGHRMGRYLAA-LLGLLII  268 (414)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~  268 (414)
                      |.+.+...+..++...........+|.|+++++|.|+.+.|+..+...+ +...+.+..++ .||+|+|+.+ ..+.+..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~   92 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLG   92 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHH
Confidence            5555666667888888888888999999998899999999998776555 45555555555 9999998764 4555555


Q ss_pred             HHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch--hhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075        269 GICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY--GSVYAIGDVAFCLGFAIGPAMSGTLVNT  346 (414)
Q Consensus       269 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~ig~~~~g~l~~~  346 (414)
                      .++...+.+.++.+.+.+...+.+...+...+....   ...+..+++.|  +...+..+....+|..++|++.+.+.++
T Consensus        93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~  169 (393)
T PRK15011         93 VLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFA---LAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG  169 (393)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH---HHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence            566666666666665443333333322222222221   22333333323  3445777888899999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        347 IGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       347 ~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      .||+..|+..+...++..+..+...
T Consensus       170 ~gw~~~f~~~~~~~~~~~~~~~~~~  194 (393)
T PRK15011        170 FSFTVMYLSAAVAFIVCGVMVWLFL  194 (393)
T ss_pred             cChHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999988877766655544433

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.50  E-value=2.7e-12  Score=121.29  Aligned_cols=171  Identities=13%  Similarity=0.145  Sum_probs=135.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      ++.++..++...+.........|.+ ++++|.+..+.|+..+...++..++.+..|++.||+|||+.+..+..+.+++.+
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~   83 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF   83 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence            4555666666666666666777775 666899999999999999999999999999999999999999999999999877


Q ss_pred             Hhhhh---hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-----
Q psy14075        274 MIPLA---RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-----  345 (414)
Q Consensus       274 ~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-----  345 (414)
                      ++...   ++.+.+....++.|++.+...+...+.   ..+..|++++++..++.+....+|..++|.+.+.+..     
T Consensus        84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~  160 (410)
T TIGR00885        84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPY---ILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPH  160 (410)
T ss_pred             HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHH---HHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            75443   456677778888999999887766655   3345567778999999999999999999999988742     


Q ss_pred             ---------------------hhchHHHHHHHHHHHHHHHHHHH
Q psy14075        346 ---------------------TIGFEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       346 ---------------------~~g~~~~~~~~~~~~~~~~~~~~  368 (414)
                                           ..+|+.+|.+.+++.++..++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~  204 (410)
T TIGR00885       161 QSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM  204 (410)
T ss_pred             chhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 24588899888776665544433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.49  E-value=5.1e-12  Score=117.02  Aligned_cols=158  Identities=12%  Similarity=0.095  Sum_probs=133.8

Q ss_pred             hchHHHHHHHhCCCccc-hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q psy14075        213 PSLPIWMMDTMGADKWQ-QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGL  291 (414)
Q Consensus       213 ~~~~~~~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  291 (414)
                      .+...++.+.+|++..+ .|.+......+..+..+..|++.||+|.|+++..+.+..++..+++++.++...+.+.-+++
T Consensus        46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll  125 (511)
T TIGR00806        46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY  125 (511)
T ss_pred             HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444666679999999 99999999999999999999999999999999999999999999999998888899999999


Q ss_pred             HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH---HHHHHHHHHHHHHHHHH
Q psy14075        292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW---MLFIIAILDFMYAPLLY  368 (414)
Q Consensus       292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~---~~~~~~~~~~~~~~~~~  368 (414)
                      |++.+...    +...++..-+|+++|+++.|+.+....+|.++++++.++ ...+||+.   ..++......+++++.+
T Consensus       126 GvaEA~~~----A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~  200 (511)
T TIGR00806       126 SVTMAARI----AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLAL  200 (511)
T ss_pred             HHHHHHHH----HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHH
Confidence            99998875    334457788999999999999999999999999999999 55677654   44555666677777777


Q ss_pred             HhcCCCc
Q psy14075        369 LLRNPPT  375 (414)
Q Consensus       369 ~~~~~~~  375 (414)
                      ++++.++
T Consensus       201 ~LP~~~~  207 (511)
T TIGR00806       201 FLKRPKR  207 (511)
T ss_pred             hCCCCch
Confidence            8775544

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.49  E-value=6.9e-13  Score=127.92  Aligned_cols=156  Identities=15%  Similarity=0.108  Sum_probs=122.9

Q ss_pred             hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhHHHH
Q psy14075        211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL-----ARNINHLI  285 (414)
Q Consensus       211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~  285 (414)
                      +....|.+. +++|.+..+.|++.+.+.++..++.++.|+++||+|+|+++..+.++.+++.+.+..     .++.+.+.
T Consensus        48 ~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  126 (467)
T PRK09556         48 FKAAQNDMI-STYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMI  126 (467)
T ss_pred             hhhhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence            444566644 558999999999999999999999999999999999999988887777766555544     46777777


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh---chHHHHHHHHHHHHH
Q psy14075        286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI---GFEWMLFIIAILDFM  362 (414)
Q Consensus       286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~---g~~~~~~~~~~~~~~  362 (414)
                      +..++.|++.+...+...   ..+.+.+|+++||+++|+.+....+|..+++.+..++.+..   +|+..|.+.++..++
T Consensus       127 ~~r~l~G~~~~~~~~~~~---~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~  203 (467)
T PRK09556        127 ALWALSGFFQSTGGPCSY---STITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALI  203 (467)
T ss_pred             HHHHHHHHHHhccchHHH---HHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHH
Confidence            788888888887755443   34778889999999999999999999999999988777653   478888776766665


Q ss_pred             HHHHHHHh
Q psy14075        363 YAPLLYLL  370 (414)
Q Consensus       363 ~~~~~~~~  370 (414)
                      ..++.++.
T Consensus       204 ~~i~~~~~  211 (467)
T PRK09556        204 IGFIGLRY  211 (467)
T ss_pred             HHHHHHHh
Confidence            55544444

>KOG3762|consensus

Probab=99.49  E-value=7.3e-13  Score=122.05  Aligned_cols=186  Identities=15%  Similarity=0.126  Sum_probs=149.8

Q ss_pred             hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075        187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL  266 (414)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  266 (414)
                      +++.+++..++.+...+..++.....+++--++++ .+..+..-|......-.+.++.-++.+++.+|+|+.+++..++.
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa  444 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA  444 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhh
Confidence            45566666555555666666666666777666776 57677777877777788888889999999999999999999999


Q ss_pred             HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH-HHHHhHHHHHHHHHHh
Q psy14075        267 IIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF-CLGFAIGPAMSGTLVN  345 (414)
Q Consensus       267 ~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~ig~~~~g~l~~  345 (414)
                      +..+=++.+....|+|..+..-++-|+..+..+..   ..+++....|++.+.++.++..... .+|-.+|..++|.+.+
T Consensus       445 ~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa---~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~  521 (618)
T KOG3762|consen  445 CNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAA---IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE  521 (618)
T ss_pred             HHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHH---HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence            99999999999999999999999999999988554   4456778888999999999976544 7899999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        346 TIGFEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                      .+|-+..|...++.+++.++....+.+..++
T Consensus       522 ~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~  552 (618)
T KOG3762|consen  522 RFGARTTFRIFGIACLVTLALFISIQLLLKR  552 (618)
T ss_pred             eehhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            9999999998888888877766665544333

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.49  E-value=5.2e-13  Score=123.57  Aligned_cols=150  Identities=26%  Similarity=0.346  Sum_probs=138.4

Q ss_pred             chhhhhhh-cCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCch-hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075         18 RENRHKYL-MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSL-PMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI   95 (414)
Q Consensus        18 ~~~~~~~~-g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~   95 (414)
                      .|.+.++. |.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+...+.++.+.+.+..++.|+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~  277 (352)
T cd06174         198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGF  277 (352)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            34555554 899999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHH
Q psy14075         96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQL  168 (414)
Q Consensus        96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~  168 (414)
                      +.+...+...+++.|..| +++|++.+++.+...++|..+++.+.+.+.+..+|+..|.+.+++.++..+...
T Consensus       278 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~  349 (352)
T cd06174         278 GLGFAFPALLTLASELAP-PEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL  349 (352)
T ss_pred             HHhccchhHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence            999999999999999999 499999999999999999999999999999989999999999999888766554

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.47  E-value=2.6e-12  Score=120.82  Aligned_cols=177  Identities=14%  Similarity=0.016  Sum_probs=131.4

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      |.++...+.....+.....+....+.+-++.+|+|+.|.+++.++..++..+.++..|++.||+|.|++..++..+..+.
T Consensus        34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~  113 (462)
T PRK15034         34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP  113 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence            56666666666666666666665666555469999999999999999999999999999999999999999999998888


Q ss_pred             HHHhhhh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH--
Q psy14075        272 LMMIPLA-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV--  344 (414)
Q Consensus       272 ~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~--  344 (414)
                      .+...+.     ++++.+++..++.|++ +..+   .+....+.+.+|+++||++.|+.....++|..+++.+...+.  
T Consensus       114 ~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f---~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~  189 (462)
T PRK15034        114 CVWLGIAVQNPNTPFGIFIVIALLCGFA-GANF---ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV  189 (462)
T ss_pred             HHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhH---HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            8877765     6777888888888886 4443   333445667789999999999997777777776666655433  


Q ss_pred             ---h-------------hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        345 ---N-------------TIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       345 ---~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                         +             ..+++++..+.....++..++.++..+
T Consensus       190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~  233 (462)
T PRK15034        190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN  233 (462)
T ss_pred             HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence               2             234666666666666665555555433

>KOG1330|consensus

Probab=99.47  E-value=4.8e-14  Score=127.81  Aligned_cols=180  Identities=14%  Similarity=0.183  Sum_probs=152.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      ...+++...+...--+.+-..++. .++.++.++...|++.....+...+++++.|++.||++|++++.+|..+..++.+
T Consensus        35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~  113 (493)
T KOG1330|consen   35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF  113 (493)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence            344455555555555554444444 4556899999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHH
Q psy14075        274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWM  352 (414)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~  352 (414)
                      ...+..+.|.+.+.-.+.|+|.....+..++.   +.|.+|.++|++.+++.+....+|..+|-...+.+.+..+ |+++
T Consensus       114 ~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~---IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~a  190 (493)
T KOG1330|consen  114 ASGFSNHFWQVLLCRGFVGIGEASYSPIAPSL---IADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWA  190 (493)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhhhcccchhH---hhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEE
Confidence            99999999999999999999999988777765   6788999999999999999999999999999888888887 9999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075        353 LFIIAILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~  377 (414)
                      |...+++.++..++.+++.++++++
T Consensus       191 f~~~avl~vi~~~L~~~f~~eP~rg  215 (493)
T KOG1330|consen  191 FRGSAVLGVIVGLLVFLFVREPERG  215 (493)
T ss_pred             EEeehHHHHHHHHHHHhhccCcccc
Confidence            9999999988888777766655543

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.47  E-value=1.6e-12  Score=122.09  Aligned_cols=145  Identities=14%  Similarity=0.173  Sum_probs=131.9

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSS   98 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~   98 (414)
                      |.+.+|+|.++.++|++.+...++..+..++.+++.||+|+|+.+.++.+...+..++.+++++.+.+++.+++.|+..+
T Consensus       229 ~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~  308 (382)
T TIGR00902       229 AIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFA  308 (382)
T ss_pred             HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Confidence            55667899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHhhcCCCcchhhHHHHHHH-HHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075         99 CSSVSGMGMLAERYPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL  166 (414)
Q Consensus        99 ~~~~~~~~~i~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~  166 (414)
                      ...+....++.+. | +++|++..++++ ...++|..+++.++|.+.+++|+ ..|++.+.+.++..++
T Consensus       309 ~~~~~~~~~i~~~-~-~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       309 VCHLAAMRYIAAQ-P-GSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHHHHHHHHhC-C-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence            9999999999998 8 489999999986 57889999999999999999986 6688888877765444

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.45  E-value=6.7e-12  Score=122.18  Aligned_cols=148  Identities=17%  Similarity=0.111  Sum_probs=117.0

Q ss_pred             CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh------hHHHHHHHHHHHHHHHhh
Q psy14075        225 ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN------INHLIVPNAGLGFAIGMV  298 (414)
Q Consensus       225 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~g~~~~~~  298 (414)
                      .+..+.+++.+...++.+++.++.|+++||+|||+.+..+.++..++.++....++      .+.+.+..++.|++.+..
T Consensus        53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~  132 (502)
T TIGR00887        53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD  132 (502)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence            34556788899999999999999999999999999999998888888777666543      456777888889988887


Q ss_pred             hhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-----------------------hhchHHHHHH
Q psy14075        299 DSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-----------------------TIGFEWMLFI  355 (414)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-----------------------~~g~~~~~~~  355 (414)
                      .+...   .+..|..|++.||++.++.+....+|..+++.+...+..                       ..+|+..+.+
T Consensus       133 ~~~~~---~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~  209 (502)
T TIGR00887       133 YPLSA---IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF  209 (502)
T ss_pred             hHHHH---HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence            55444   457899999999999999999999999999988776542                       1379999977


Q ss_pred             HHHHHHHHHHHHHHhcCCCc
Q psy14075        356 IAILDFMYAPLLYLLRNPPT  375 (414)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~  375 (414)
                      .++..++..+..+++++.++
T Consensus       210 ~~ip~~i~~~~~~~lpESpr  229 (502)
T TIGR00887       210 GAVPALLALYFRLTIPETPR  229 (502)
T ss_pred             HHHHHHHHHHHHHhCCCCHH
Confidence            77666665555555665544

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.45  E-value=1.1e-12  Score=126.93  Aligned_cols=143  Identities=24%  Similarity=0.303  Sum_probs=115.8

Q ss_pred             ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh---hhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        227 KWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR---NINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       227 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      ..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++.....   +.+.+++..++.|++.+...+...
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~  149 (481)
T TIGR00879        70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP  149 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence            78899999999999999999999999999999999999888888877765433   333567778888888887755433


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH---HHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS---GTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~---g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                         ....|..|+++|+++.++.+....+|..+++.+.   +...+..+|++.|.+.+...++..+..++.++
T Consensus       150 ---~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~  218 (481)
T TIGR00879       150 ---MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPE  218 (481)
T ss_pred             ---HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence               3467888899999999999999999999999998   66667789999999876666665555545544

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK10133 L-fucose transporter; Provisional

Probab=99.44  E-value=1.5e-11  Score=117.26  Aligned_cols=147  Identities=12%  Similarity=0.131  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      +....+.++...+.........|.+ ++.+|.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~  106 (438)
T PRK10133         28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA  106 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence            3445555566666667777788886 677999999999999999999999999999999999999999999999999887


Q ss_pred             Hh---hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075        274 MI---PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV  344 (414)
Q Consensus       274 ~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~  344 (414)
                      ++   ...++.+.+.+..++.|++.+...+...+..   .+..+++++....++.+....+|..++|.+.+.+.
T Consensus       107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v---~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~  177 (438)
T PRK10133        107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFV---TVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI  177 (438)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65   3456777788888999999998877666553   34445555566788999999999999999877654

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.42  E-value=8.9e-10  Score=100.92  Aligned_cols=310  Identities=14%  Similarity=0.062  Sum_probs=220.9

Q ss_pred             hhhhhh-hcCCcchHH-HHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         19 ENRHKY-LMGETKAVG-VMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        19 ~~~~~~-~g~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      |.+.+. .|++..|+. -+.-...-.+....++...++|..+.|++++++.+...+...+.-+.++.+.+-+..+..|++
T Consensus        28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~  107 (412)
T PF01770_consen   28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLA  107 (412)
T ss_pred             HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHH
Confidence            334443 788888774 456666677888999999999999999999999999999999999999999999999999998


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--CChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      .+.. .+..+++-...| +++-.++.+....+..+|-.++.++|..+...-  +.+....+......+..+..+++++++
T Consensus       108 ~a~e-vay~sYiys~v~-~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~  185 (412)
T PF01770_consen  108 TAAE-VAYYSYIYSVVD-KEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK  185 (412)
T ss_pred             HHHH-HHHHHHheeecC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            8874 556788888888 499999999999999999999999999887643  344555555554445555555544322


Q ss_pred             CC-----------------CCC-----CCC----------------------chhhhhccChHHHHHHHHHHHHHHHHHh
Q psy14075        175 VV-----------------KQE-----VEP----------------------PTLKSLVMDPYILIAAGAITFANTGIAM  210 (414)
Q Consensus       175 ~~-----------------~~~-----~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (414)
                      +.                 .++     +++                      +++++..++|.++...+-+.+...++..
T Consensus       186 ~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~q  265 (412)
T PF01770_consen  186 RSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQ  265 (412)
T ss_pred             cccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHH
Confidence            10                 000     000                      1134556788888877878888888888


Q ss_pred             hhhchHHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH--HHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075        211 LEPSLPIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY--LAALLGLLIIGICLMMIPLARNINHLIV  286 (414)
Q Consensus       211 ~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~  286 (414)
                      +..+.....++.  -+-+..-.|..-+...+.+.++.+..|++..++.+.  ..+.....+.+..++++.+.++.|....
T Consensus       266 v~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~  345 (412)
T PF01770_consen  266 VINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYA  345 (412)
T ss_pred             HHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            877777766654  122333457777777888888888889986555553  3334445555666777788888888888


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH
Q psy14075        287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF  333 (414)
Q Consensus       287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  333 (414)
                      .-++++..+.+..+...   ..++.....+..|..+|+.++...+-.
T Consensus       346 ~yIif~~~y~fliTiA~---~qIA~~l~~e~yaLVFGiNtf~Al~LQ  389 (412)
T PF01770_consen  346 GYIIFRSLYMFLITIAS---FQIAKNLSEERYALVFGINTFVALVLQ  389 (412)
T ss_pred             HHHHHHHHHHHHHHHHH---HHHHHhccccceeeeeeeHHHHHHHHH
Confidence            88877777766543322   235555556777888888776544433

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.42  E-value=1.1e-11  Score=119.29  Aligned_cols=182  Identities=15%  Similarity=0.173  Sum_probs=147.9

Q ss_pred             hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075        187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL  266 (414)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  266 (414)
                      ..+|||.|..+.....+.+++......-.+-++.+ ..-|+...++......+..++..+++|.++||++||++++.+-.
T Consensus         5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~   83 (524)
T PF05977_consen    5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQL   83 (524)
T ss_pred             ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Confidence            45889999999999999888888877777766665 56788889999999999999999999999999999999998887


Q ss_pred             HHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075        267 IIGICLMMIPLA-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG  341 (414)
Q Consensus       267 ~~~i~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g  341 (414)
                      +.++..+.+...     .+.+.+++..++.|++..+..|...+.   +.+..|+++...++++.+...++...+||.++|
T Consensus        84 ~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~---ip~lV~~~~L~~A~al~s~~~niar~iGPalgG  160 (524)
T PF05977_consen   84 LRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAI---IPELVPKEDLPAANALNSISFNIARIIGPALGG  160 (524)
T ss_pred             HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence            776554433321     356677778888888888887766655   556677888899999999999999999999999


Q ss_pred             HHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        342 TLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       342 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      .+....|..++|.+.++..++........++
T Consensus       161 ~Lva~~G~~~~f~inalsfl~~i~~l~~~~~  191 (524)
T PF05977_consen  161 ILVAFFGAAAAFLINALSFLISILALLRWKP  191 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            9999999999999888877776555444443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.42  E-value=3.5e-12  Score=117.48  Aligned_cols=192  Identities=14%  Similarity=0.144  Sum_probs=159.8

Q ss_pred             hhhhccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhC----CCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhH
Q psy14075        185 LKSLVMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDTMG----ADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRY  258 (414)
Q Consensus       185 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~  258 (414)
                      .++.+++| .++.+...-+.--++++++...+..|+....+    ++..++.-++..+..-.-+..+++||++|| +|+|
T Consensus        13 ~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~   92 (498)
T COG3104          13 EMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR   92 (498)
T ss_pred             ccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence            34556655 56667777777889999999999999998888    999998888888887777889999999999 5999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHH
Q psy14075        259 LAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIG  336 (414)
Q Consensus       259 ~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig  336 (414)
                      +.+..+.++++++.+++....  +...+.+.+.+.++|.|..=+...+++...-+..+++ |-..+++.....++|+.++
T Consensus        93 ~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~  171 (498)
T COG3104          93 RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIA  171 (498)
T ss_pred             HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHH
Confidence            999999999999999998873  5667788888888999998887777666555444444 6678888888889999999


Q ss_pred             HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075        337 PAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       337 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (414)
                      |.+.+++.+++||+..|...++...++++..+..++..+..
T Consensus       172 p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~  212 (498)
T COG3104         172 PIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI  212 (498)
T ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence            99999999999999999999999999998888887654443

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.41  E-value=1.1e-11  Score=120.17  Aligned_cols=155  Identities=15%  Similarity=0.176  Sum_probs=117.6

Q ss_pred             hhhh-hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHHh
Q psy14075         19 ENRH-KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI---FAFGRTYGVLFLARSLQG   94 (414)
Q Consensus        19 ~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G   94 (414)
                      |.+. +++|.+..+.++..+...++..++.+..|+++||+|||+.+..+.++..++.+.   ...+++...+++.+++.|
T Consensus       274 p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  353 (490)
T PRK10642        274 PSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLA  353 (490)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            4444 567888888888888889999999999999999999999988877654433322   223456778888999999


Q ss_pred             hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075         95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus        95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      ++.+........++.+.+|+ +.|+++++.......++..++|.+.+++.+.. +|+.+++...+.+++..+..++. ||
T Consensus       354 ~~~~~~~g~~~~~~~~~~p~-~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-pe  431 (490)
T PRK10642        354 VILNCFTGVMASTLPAMFPT-HIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM-KE  431 (490)
T ss_pred             HHHHHHHHHHHHHHHHHCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh-cc
Confidence            88777777777888999995 99999999754445566788899999888764 47878777777766666655544 55


Q ss_pred             CC
Q psy14075        174 GV  175 (414)
Q Consensus       174 ~~  175 (414)
                      ++
T Consensus       432 s~  433 (490)
T PRK10642        432 TA  433 (490)
T ss_pred             cc
Confidence            43

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.41  E-value=4.7e-11  Score=115.56  Aligned_cols=153  Identities=14%  Similarity=0.075  Sum_probs=121.6

Q ss_pred             hhhhhhhcCCcchHHHHHH-HHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHHHH
Q psy14075         19 ENRHKYLMGETKAVGVMFG-SKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFG-RTYGVLFLARSLQ   93 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l~   93 (414)
                      |.+.+++|.++.+.+++.. ...++..++.++.|+++||+|+||.+.++.++.+++.++.   +.. ++.+.+.+.-+++
T Consensus       247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~  326 (491)
T PRK11010        247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE  326 (491)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence            3345678999999999974 6668999999999999999999998877666555544332   333 4555555566666


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      .++.+...+...++..+..+ ++.+++..++.+...++|..+++++.|.+.+..||+..|.+.++++++..+...+.++
T Consensus       327 ~~~~g~~~~~~~a~~~~l~~-~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        327 NLCGGMGTAAFVALLMTLCN-KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHcC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            66666666777888889998 4899999999999999999999999999999999999999999998887777666543

>PRK09952 shikimate transporter; Provisional

Probab=99.40  E-value=4.3e-11  Score=114.43  Aligned_cols=164  Identities=15%  Similarity=0.172  Sum_probs=116.4

Q ss_pred             HHHHHHHHHHHHHHHhhhhchHHHHHHHh--CCCccchhhHh-----HHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHH
Q psy14075        195 LIAAGAITFANTGIAMLEPSLPIWMMDTM--GADKWQQGVSF-----LPASISYLIGTNLFGPLGHRMGRYLAALLGLLI  267 (414)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~g~~~-----~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~  267 (414)
                      ....+..++...-...+....|.+..+.+  +.++. .+...     ....++..++.++.|+++||+|||+.+..+..+
T Consensus        25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~  103 (438)
T PRK09952         25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWM  103 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHH
Confidence            33444445544544444445555555544  56655 34432     233455678888999999999999999999999


Q ss_pred             HHHHHHHhhhhhhhH--------HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075        268 IGICLMMIPLARNIN--------HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM  339 (414)
Q Consensus       268 ~~i~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~  339 (414)
                      .+++.++..+.++..        .+.+.-++.|++.+...+...   .+..|..|+++|+...+..+....+|..+++.+
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~---~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~  180 (438)
T PRK09952        104 MGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAA---LLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGL  180 (438)
T ss_pred             HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHH---HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            999988888887755        355567778888887755433   457788999999999999888888888888777


Q ss_pred             HHHHHh--------hhchHHHHHHHHHHHHH
Q psy14075        340 SGTLVN--------TIGFEWMLFIIAILDFM  362 (414)
Q Consensus       340 ~g~l~~--------~~g~~~~~~~~~~~~~~  362 (414)
                      ...+..        .+||+..|.+.++..++
T Consensus       181 ~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~  211 (438)
T PRK09952        181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLI  211 (438)
T ss_pred             HHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence            766543        47899999887665443

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.40  E-value=8e-12  Score=99.26  Aligned_cols=136  Identities=26%  Similarity=0.368  Sum_probs=111.5

Q ss_pred             HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy14075        233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDI  312 (414)
Q Consensus       233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  312 (414)
                      ......++..++.++.+++.||++||+.+..+.....++.+.....++.+......++.|++.+...+....   ...|.
T Consensus         3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~   79 (141)
T TIGR00880         3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA---LIADI   79 (141)
T ss_pred             EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH---HHHHH
Confidence            344567788899999999999999999999888888888777777777777777778888888776544433   46677


Q ss_pred             ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        313 RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       313 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      .|+++|++..++.+....+|..++|.+.+.+.+..+|+..+.+.+...++..+......
T Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (141)
T TIGR00880        80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLL  138 (141)
T ss_pred             CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcC
Confidence            88889999999999999999999999999999999999999888777777666555443

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.39  E-value=9.6e-12  Score=120.59  Aligned_cols=148  Identities=20%  Similarity=0.278  Sum_probs=115.6

Q ss_pred             CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh------------hhhHHHHHHHHHH
Q psy14075        224 GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA------------RNINHLIVPNAGL  291 (414)
Q Consensus       224 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~~~~~  291 (414)
                      +.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...+.            .....+++.-++.
T Consensus        51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~  130 (479)
T PRK10077         51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG  130 (479)
T ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence            7888899999999999999999999999999999999999988888776655442            1123445667888


Q ss_pred             HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH--------hhhchHHHHHHHHHHHHHH
Q psy14075        292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV--------NTIGFEWMLFIIAILDFMY  363 (414)
Q Consensus       292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~--------~~~g~~~~~~~~~~~~~~~  363 (414)
                      |++.+...+...   .++.|..|+++||++.++.+....+|..+++.+.+.+.        +..||++.|++.++..++.
T Consensus       131 G~~~g~~~~~~~---~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~  207 (479)
T PRK10077        131 GIGVGLASMLSP---MYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLF  207 (479)
T ss_pred             hhhHhHHhhHHH---HHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHH
Confidence            888888765444   34778888999999999999988999988877665543        3468999999887777776


Q ss_pred             HHHHHHhcCCC
Q psy14075        364 APLLYLLRNPP  374 (414)
Q Consensus       364 ~~~~~~~~~~~  374 (414)
                      .+..+++++.+
T Consensus       208 ~~~~~~l~~s~  218 (479)
T PRK10077        208 LMLLYFVPETP  218 (479)
T ss_pred             HHHHHcCCCCc
Confidence            55555555443

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.38  E-value=5e-11  Score=113.90  Aligned_cols=160  Identities=14%  Similarity=0.125  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHhhhhchHHHHHHHhC---CCccch---hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        200 AITFANTGIAMLEPSLPIWMMDTMG---ADKWQQ---GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~---g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      ..++.......+....| ++.++++   .+..+.   +..+....++..+++++.|+++||+|||+.+..+..+.+++.+
T Consensus        30 ~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~  108 (432)
T PRK10406         30 GNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSL  108 (432)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence            34444455445444444 4555553   344332   3344455566669999999999999999999999999999888


Q ss_pred             HhhhhhhhH--------HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH-
Q psy14075        274 MIPLARNIN--------HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV-  344 (414)
Q Consensus       274 ~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~-  344 (414)
                      ...+.++..        .+.+.-++.|++.|...+...   +++.|..|+++||+..++.+.....|..+++.+...+. 
T Consensus       109 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~---~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~  185 (432)
T PRK10406        109 VIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSA---TYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQ  185 (432)
T ss_pred             HHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHH---HHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            877766532        456677788888887755444   45778889999999999887777777777776655443 


Q ss_pred             -------hhhchHHHHHHHHHHHHHH
Q psy14075        345 -------NTIGFEWMLFIIAILDFMY  363 (414)
Q Consensus       345 -------~~~g~~~~~~~~~~~~~~~  363 (414)
                             +.+||+..|.+.++..++.
T Consensus       186 ~~~~~~~~~~gWr~~F~i~~~~~ll~  211 (432)
T PRK10406        186 TLEDAELREWGWRIPFALGAVLAVVA  211 (432)
T ss_pred             hCCHHHHhccchHHHHHHHHHHHHHH
Confidence                   2579999998876655543

>KOG3764|consensus

Probab=99.38  E-value=2.9e-12  Score=113.95  Aligned_cols=152  Identities=22%  Similarity=0.366  Sum_probs=135.2

Q ss_pred             hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhh
Q psy14075        223 MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSM  302 (414)
Q Consensus       223 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  302 (414)
                      .+.+..+.|+++....+.+++.+++.|.+.||+|+|..+++|+..+..+.+++.+.++++.+.++-.+.|++..+.....
T Consensus       101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg  180 (464)
T KOG3764|consen  101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG  180 (464)
T ss_pred             ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence            45667789999999999999999999999999999999999999999999999999999999999999999999886554


Q ss_pred             hhhhhhhhhccccc-chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075        303 MPELGYLVDIRHTA-VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       303 ~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (414)
                      .+   .+++.+|++ +|++++|+.-.+..+|-.+||+++|.++|..|++..|.++++++++-..+.++..++.+.+
T Consensus       181 la---mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~  253 (464)
T KOG3764|consen  181 LA---MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD  253 (464)
T ss_pred             HH---HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence            44   466777766 4799999999999999999999999999999999999999999999888887776654443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.37  E-value=3.8e-12  Score=122.86  Aligned_cols=148  Identities=17%  Similarity=0.227  Sum_probs=120.9

Q ss_pred             HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhh
Q psy14075        222 TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA--RNINHLIVPNAGLGFAIGMVD  299 (414)
Q Consensus       222 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~  299 (414)
                      +++++..+.|.+.+.+.++..+++++.|++.||+|+|+.+..+.++..++.++..+.  .+.+.+++..++.|++.+...
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~  149 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS  149 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence            478899999999999999999999999999999999999999988888776665543  334556666777777777665


Q ss_pred             hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-GFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +...   ....+..|+++|+++.|+.+....+|..++|.+.+.+.+.. ||+..|++.++..++..++.+...+
T Consensus       150 ~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~  220 (465)
T TIGR00894       150 PATH---KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA  220 (465)
T ss_pred             hhHH---HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence            4433   34678888999999999999999999999999999999984 9999999988877766655555443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.37  E-value=3.3e-11  Score=113.22  Aligned_cols=156  Identities=15%  Similarity=0.117  Sum_probs=112.9

Q ss_pred             HHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH----HHHHHHHHHHHHHHHHhh
Q psy14075        201 ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY----LAALLGLLIIGICLMMIP  276 (414)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~----~~~~~~~~~~~i~~~~~~  276 (414)
                      .+....+......++|.|+++ +|.|..+.|+..+...+...++.++.|++.||++|+    +.+.+...+.  ......
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~   89 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWF   89 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHH
Confidence            555566677888899999977 699999999999999999999999999999999983    3322222111  122222


Q ss_pred             hhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHH
Q psy14075        277 LARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFII  356 (414)
Q Consensus       277 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~  356 (414)
                      ..++.+.+.+...+.+++.+...+......    +.. .++|+++.+..+....+|..+||.+.+++.+++||+..|+..
T Consensus        90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~----~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~  164 (382)
T PRK11128         90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALA----NTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWIL  164 (382)
T ss_pred             hcccHHHHHHHHHHHHHHHcccccHHHHHH----HHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence            345666666666667777666655433322    222 344678888888888999999999999999999999999877


Q ss_pred             HHHHHHHH
Q psy14075        357 AILDFMYA  364 (414)
Q Consensus       357 ~~~~~~~~  364 (414)
                      ++..++..
T Consensus       165 ~~~~~~~~  172 (382)
T PRK11128        165 TAGVASML  172 (382)
T ss_pred             HHHHHHHH
Confidence            76554443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.36  E-value=3.3e-11  Score=114.00  Aligned_cols=166  Identities=19%  Similarity=0.171  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh-----hhHH-HHHHHHHHHHHHHH
Q psy14075        200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM-----GRYL-AALLGLLIIGICLM  273 (414)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~-~~~~~~~~~~i~~~  273 (414)
                      .++.+.........-+|.|+++. |+|..+.|++......  .+..++.|+++||+     |||| .+..+..+.+++..
T Consensus         7 l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~   83 (402)
T PRK11902          7 LGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA   83 (402)
T ss_pred             HHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence            34555666677778899999985 9999999998666554  57889999999999     6654 67777777777766


Q ss_pred             Hhhhhh---hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-hch
Q psy14075        274 MIPLAR---NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-IGF  349 (414)
Q Consensus       274 ~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~  349 (414)
                      .+.+.+   +.+.+....++.++......+...   +...|..|+++|+++.++......+|..+++.+.+.+.+. .||
T Consensus        84 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw  160 (402)
T PRK11902         84 AMAFCPPHAALWPLAGLAVLVAFLSASQDIVFD---AYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW  160 (402)
T ss_pred             HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence            666652   344444444455554444433333   4466788889999999999999999999999999999886 499


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Q psy14075        350 EWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      +..|++.++..++..+.....+
T Consensus       161 ~~~f~i~a~~~l~~~l~~~~~~  182 (402)
T PRK11902        161 GNTYLLMAGLMLAGALTTLWAP  182 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC
Confidence            9999998877766555443333

>PTZ00207 hypothetical protein; Provisional

Probab=99.32  E-value=2e-10  Score=111.28  Aligned_cols=158  Identities=12%  Similarity=0.059  Sum_probs=114.1

Q ss_pred             hhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh------hhhHH
Q psy14075        210 MLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA------RNINH  283 (414)
Q Consensus       210 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~  283 (414)
                      .+..+.|. +++.+|++..+.+.+..... ......++.|++.||+|+|+++.++.++..++.++.+++      ++.+.
T Consensus        45 ~fsv~s~~-L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~  122 (591)
T PTZ00207         45 AFNLISGA-MQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR  122 (591)
T ss_pred             HHHHHHHH-HHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH
Confidence            44444554 56679999999888776533 333456678999999999999999999999999888876      46677


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy14075        284 LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMY  363 (414)
Q Consensus       284 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~  363 (414)
                      +.+..++.|++.+...+...   ....+.+| ++||.+.|+......+|+++.+.+...+.+ .+++..|++.++..++.
T Consensus       123 l~l~r~l~G~G~~~~~~~~~---~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv  197 (591)
T PTZ00207        123 LSVYNGLMTLGCMLFDLGAV---VTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV  197 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHH---HHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence            77777788888766544333   23556675 678999999999999999865555544443 35777787777777776


Q ss_pred             HHHHHHhcCCC
Q psy14075        364 APLLYLLRNPP  374 (414)
Q Consensus       364 ~~~~~~~~~~~  374 (414)
                      .++...+.+.+
T Consensus       198 ~ll~~~~vr~p  208 (591)
T PTZ00207        198 GILAIVFMRLP  208 (591)
T ss_pred             HHHHHhheeCC
Confidence            66655544433

>TIGR00896 CynX cyanate transporter

Probab=99.32  E-value=7.7e-11  Score=109.61  Aligned_cols=148  Identities=18%  Similarity=0.197  Sum_probs=116.4

Q ss_pred             HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy14075        209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN  288 (414)
Q Consensus       209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  288 (414)
                      ......+|.+.+ ++|.+..+.++..+...++..++.++.|++.||+|||+.+..+.++..++.+.. ..++.+.+.+..
T Consensus        17 ~~~~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~   94 (355)
T TIGR00896        17 TSVGPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT   94 (355)
T ss_pred             ccCcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence            445567777555 489999999999999999999999999999999999999999888877776665 556666667777


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHH
Q psy14075        289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFM  362 (414)
Q Consensus       289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~  362 (414)
                      ++.|++.+...+.....   ..+..+ ++|+++.++.+....+|..+++.+.+.+.+..+  |+..|...++..++
T Consensus        95 ~~~g~g~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~  166 (355)
T TIGR00896        95 ALIGVGIAIINVLLPSL---IKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL  166 (355)
T ss_pred             HHHHHHHHHHhccchHH---HHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence            78888877764443332   334444 578999999999999999999999999987653  88888766654443

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00898 2A0119 cation transport protein

Probab=99.32  E-value=9.2e-12  Score=121.55  Aligned_cols=148  Identities=18%  Similarity=0.316  Sum_probs=123.2

Q ss_pred             HHHhCCC---ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy14075        220 MDTMGAD---KWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIG  296 (414)
Q Consensus       220 ~~~~g~~---~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~  296 (414)
                      .++++++   +.+.++..+...++.+++.++.|+++||+|||+.+..+.++..++.+...+.++.+.+.+..++.|++.+
T Consensus       116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~  195 (505)
T TIGR00898       116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIG  195 (505)
T ss_pred             EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhcc
Confidence            3447887   7889999999999999999999999999999999999999999988888888888888888888888888


Q ss_pred             hhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        297 MVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      ...+...   ....|..|++.|+.+.++......+|..++|.+.+.+.+   |++.+.+.++..++..+..++.++.
T Consensus       196 ~~~~~~~---~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~es  266 (505)
T TIGR00898       196 GIWVQAV---VLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPES  266 (505)
T ss_pred             chHHHHH---HHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            7644443   346788899999999999988889999998888766554   8999988887777766666555543

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.30  E-value=6.9e-11  Score=106.65  Aligned_cols=177  Identities=17%  Similarity=0.123  Sum_probs=134.9

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      |.++...+.....+.....+....+. +.+.+|+|+.|.+++.++..+.+.+.++..|.+.||+|.|++...+.++..+-
T Consensus        14 ~~L~~S~~af~v~F~VW~l~s~l~~~-i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP   92 (417)
T COG2223          14 RNLWLSTLAFDVGFMVWTLFSPLGVF-IKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP   92 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-hccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence            44555555444444444444444443 45779999999999999999999999999999999999999999999998888


Q ss_pred             HHHhhhhhhhH---HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075        272 LMMIPLARNIN---HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG  348 (414)
Q Consensus       272 ~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g  348 (414)
                      .+.+.++.+.+   .+++..++.|++-+.    +...+.++..-+|++++|.++|+.. ..|+|..+...+...+....|
T Consensus        93 ~~~~~~a~~~~~~~~ll~~gll~G~~Gas----Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g  167 (417)
T COG2223          93 CLGLAFAVTYPSTWQLLVIGLLLGLAGAS----FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG  167 (417)
T ss_pred             HHHHHHHccCCchHHHHHHHHHHhcccce----ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence            88887765443   555555555554332    3344455778899999999999998 999999999999999999999


Q ss_pred             ---hHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075        349 ---FEWMLFIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       349 ---~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (414)
                         |+.+..+.....++..+..++..++.
T Consensus       168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~  196 (417)
T COG2223         168 FLAWRNVAGIYVVALAIAAVLAWLGMNDV  196 (417)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence               88888877777777666666554433

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.30  E-value=1.7e-11  Score=121.63  Aligned_cols=159  Identities=13%  Similarity=0.150  Sum_probs=124.2

Q ss_pred             hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----------
Q psy14075        211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-----------  279 (414)
Q Consensus       211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----------  279 (414)
                      ....++. ++++++++..+.|++.+.+.++..++.++.+++.||.+||+.+.++.++++++.+++.+.+           
T Consensus        52 ~~~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~  130 (633)
T TIGR00805        52 VNSSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT  130 (633)
T ss_pred             HHhhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence            3334444 5667999999999999999999999999999999999999999999999999988776543           


Q ss_pred             ----------------------------------------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchh
Q psy14075        280 ----------------------------------------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYG  319 (414)
Q Consensus       280 ----------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g  319 (414)
                                                              ....+++..++.|++.+...+...   +++.|..|+++|+
T Consensus       131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~---~~i~d~~~~~~~~  207 (633)
T TIGR00805       131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI---SYIDDFAKSKNSP  207 (633)
T ss_pred             ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc---hhhhccCCccccH
Confidence                                                    122345667777777766644443   4577888999999


Q ss_pred             hHHhHHHHHHHHHHhHHHHHHHHHHhhh---------------------c-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        320 SVYAIGDVAFCLGFAIGPAMSGTLVNTI---------------------G-FEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       320 ~~~g~~~~~~~~g~~ig~~~~g~l~~~~---------------------g-~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      ...|+.+....+|..+|+.+++++.+.+                     | |+..|++.+++.++..+..+.++++
T Consensus       208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~  283 (633)
T TIGR00805       208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKA  283 (633)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence            9999999999999999999999988643                     2 5666777777777666555555543

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.30  E-value=1.3e-10  Score=124.43  Aligned_cols=184  Identities=10%  Similarity=0.027  Sum_probs=124.8

Q ss_pred             hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCC-----ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHH
Q psy14075        186 KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGAD-----KWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLA  260 (414)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~  260 (414)
                      +++++++++..+....++..+..+.....++.+.......+     ....++..+.+.+..++..++.|+++||++||++
T Consensus         5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~   84 (1140)
T PRK06814          5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL   84 (1140)
T ss_pred             hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence            34677777776666666655554333222222211111111     1346677778888999999999999999999987


Q ss_pred             HHHHHH---HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHH
Q psy14075        261 ALLGLL---IIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGP  337 (414)
Q Consensus       261 ~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~  337 (414)
                      +.....   ...+..+.....++.+.+++..++.|++.++..+...+.   +.+..+++++++++|+.++...+|..+||
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~---l~~~~~~~~~~~a~~~~~~~~~ig~~igp  161 (1140)
T PRK06814         85 AKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSI---LPDHLNKDELLGANALVEAGTFIAILLGT  161 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHh---hHhhcCccccchhhHHHHHHHHHHHHHHH
Confidence            533211   211111222233678888888999999988886655544   66788889999999999999999999999


Q ss_pred             HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        338 AMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       338 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      .++|++.+..+|+..|...+++.+++.++.+.+++
T Consensus       162 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (1140)
T PRK06814        162 IIGGLATISGNFVILVALLMGIAVLGWLASLFIPK  196 (1140)
T ss_pred             HHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99999999999998885555555554444444443

>PRK15075 citrate-proton symporter; Provisional

Probab=99.30  E-value=2.2e-10  Score=109.49  Aligned_cols=161  Identities=13%  Similarity=0.119  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh-HHH-----HHHHHhhhhhhhhhhhhhhhHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF-LPA-----SISYLIGTNLFGPLGHRMGRYLAALLGLLI  267 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~-~~~-----~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~  267 (414)
                      .....+..++.......+....|...++ ++.++.+.+... +..     .+...++.++.|++.||+|||+.+..+..+
T Consensus        17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~   95 (434)
T PRK15075         17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI   95 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence            3445556666667777777778865554 787776654332 221     222346788999999999999999999999


Q ss_pred             HHHHHHHhhhhhhhHH--------HHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075        268 IGICLMMIPLARNINH--------LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM  339 (414)
Q Consensus       268 ~~i~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~  339 (414)
                      ..++.++..+.++.+.        +.+.-++.|++.+...+...   .+..|..|+++|+++.++.+...++|..+++.+
T Consensus        96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~---~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~  172 (434)
T PRK15075         96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVS---VYLAEIATPGRKGFYTSWQSASQQVAVVFAALL  172 (434)
T ss_pred             HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHH---HHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999888888876552        35556677777776644333   457788999999999999998888888888877


Q ss_pred             HHHH--------HhhhchHHHHHHHHH
Q psy14075        340 SGTL--------VNTIGFEWMLFIIAI  358 (414)
Q Consensus       340 ~g~l--------~~~~g~~~~~~~~~~  358 (414)
                      .+.+        .+..||++.|++...
T Consensus       173 g~~l~~~~~~~~~~~~gWr~~f~~~~~  199 (434)
T PRK15075        173 GYLLNQWLSPAQMAEWGWRIPFLIGCL  199 (434)
T ss_pred             HHHHHHhCCHHHHhccchHHHHHHHHH
Confidence            7765        356789999987543

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.28  E-value=3.3e-11  Score=113.47  Aligned_cols=142  Identities=18%  Similarity=0.135  Sum_probs=114.7

Q ss_pred             hhhh-hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHH--HHHHh--hhhHHHHHHHHHHH
Q psy14075         19 ENRH-KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST--LIFAF--GRTYGVLFLARSLQ   93 (414)
Q Consensus        19 ~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~   93 (414)
                      |.+. +++|.++.+.+.+.+...++..++.++.|+++||+|||+.+.....+..+..  +...+  .++.+.+....++.
T Consensus       243 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (394)
T TIGR00883       243 PTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGL  322 (394)
T ss_pred             HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence            4444 6788999999999999999999999999999999999998775554444332  22222  25677777888899


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHH-HHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHH
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGI-ALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALAL  161 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~  161 (414)
                      |++.+...+...+++.|.+|+ ++|++++++ .+....+|..++|.+++.+.++.| |+..++......+
T Consensus       323 g~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l  391 (394)
T TIGR00883       323 ALIGGMYTGPMGSFLPELFPT-EVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL  391 (394)
T ss_pred             HHHHHHHhhhHHHHHHHhCCc-cceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence            999988999999999999994 899999998 456677899999999999999988 8887777665544

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>KOG3098|consensus

Probab=99.28  E-value=4.7e-09  Score=97.81  Aligned_cols=300  Identities=15%  Similarity=0.142  Sum_probs=184.6

Q ss_pred             HHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCc
Q psy14075         36 FGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD  115 (414)
Q Consensus        36 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~  115 (414)
                      .++-+....++.++.+.+.|+.|+|+.++++...+....+.+-+ .|-+.+++.-.+.|+|.+..+...-.++++..+ +
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st-~  133 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST-R  133 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCC-h
Confidence            67777888899999999999999999999999999988887755 456677788899999999999999999999998 5


Q ss_pred             chhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--------CCh-h----------HHHHHHHHHHHHHHH--HHHhccCC
Q psy14075        116 RERGNAMGIALGGLALGVLIGPPFGGIMYQFV--------GKT-A----------PFLILSALALGDGLL--QLLLLQPG  174 (414)
Q Consensus       116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--------gw~-~----------~f~~~~~~~~~~~~~--~~~~~~~~  174 (414)
                      +++.+..++.......+.++|..+-..+..+-        +-+ .          ...+.+++..+..+.  ...+.|.+
T Consensus       134 ~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~  213 (461)
T KOG3098|consen  134 ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSK  213 (461)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCcc
Confidence            99999999999999998888866543332211        111 0          111111111111111  11111211


Q ss_pred             CCC-CCCCC-ch-------hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHH--hCCC-ccchhhHhHHHHHHHH
Q psy14075        175 VVK-QEVEP-PT-------LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDT--MGAD-KWQQGVSFLPASISYL  242 (414)
Q Consensus       175 ~~~-~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-~~~~g~~~~~~~~~~~  242 (414)
                      ... .+++. ..       .-+++++|+...+....+..+.....+....|..+.-.  .+.+ ....+......+++.+
T Consensus       214 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v  293 (461)
T KOG3098|consen  214 DVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEV  293 (461)
T ss_pred             chhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHH
Confidence            111 01111 12       22456778877776666666555555555666554332  2222 1223445555667777


Q ss_pred             hhhhhhhhhhhh---hhhHHHHHHHHHHHHHHHHHhhhh------------------hhhHHHHHHHHHHHHHHHhhhhh
Q psy14075        243 IGTNLFGPLGHR---MGRYLAALLGLLIIGICLMMIPLA------------------RNINHLIVPNAGLGFAIGMVDSS  301 (414)
Q Consensus       243 ~~~~~~g~l~d~---~~~~~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~  301 (414)
                      ++....+.+.+|   +|+++.+.++..+-.++.++....                  ++.....+..++.|++-......
T Consensus       294 ~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~  373 (461)
T KOG3098|consen  294 IGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQ  373 (461)
T ss_pred             HHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHH
Confidence            777777777765   567777777776666655544321                  12334455566667776666544


Q ss_pred             hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075        302 MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG  341 (414)
Q Consensus       302 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g  341 (414)
                      .....+   ... ++.|..+.++...-..++..++-....
T Consensus       374 ~~~ii~---~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~  409 (461)
T KOG3098|consen  374 RYVIIA---LLY-PDDRAQAFSLFKFYQSVASCVAFFFSP  409 (461)
T ss_pred             HHHHHH---HHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence            443332   233 455577777776666666655444433

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.27  E-value=5.9e-11  Score=109.21  Aligned_cols=181  Identities=18%  Similarity=0.248  Sum_probs=118.7

Q ss_pred             ccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075        189 VMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII  268 (414)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~  268 (414)
                      .||+.++......++..+.+....++.|.+++++.|+++.+.|.+++...+..++.+++.|.++||++.||-++......
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l   83 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL   83 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence            57889999999999999999999999999999888999999999999999999999999999999999655443332222


Q ss_pred             --HHH-HHHhhhhhhh-HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075        269 --GIC-LMMIPLARNI-NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV  344 (414)
Q Consensus       269 --~i~-~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~  344 (414)
                        ..+ ++...+.+-. ....+..++.++..+.......+..-...|...+ +.+.-+|-....+++|.+++..+.|.+.
T Consensus        84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr-~~~feYG~~R~wGSig~ai~s~~~G~L~  162 (412)
T PF01306_consen   84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR-RNGFEYGRARMWGSIGFAIASLLAGILF  162 (412)
T ss_dssp             HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH-HHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH-HhcCCcchHHHHhhHHHHHHHHHhheee
Confidence              112 2222222110 1122333333444444444444444333444333 2366677778888999999999999999


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        345 NTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      + .+.+..|++.....++..++.+..+
T Consensus       163 ~-i~p~~~fwi~s~~~~il~lll~~~~  188 (412)
T PF01306_consen  163 N-INPNIIFWIASAAAIILLLLLLLLK  188 (412)
T ss_dssp             H-HHHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred             e-eCccHHHHHHHHHHHHHHHHHHHcC
Confidence            7 4566777776655555444444443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.27  E-value=1.6e-10  Score=110.15  Aligned_cols=151  Identities=17%  Similarity=0.166  Sum_probs=133.9

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCc--hhHHHHHHHHHHHHHHHHh--------hhhHHHHHHHHH
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS--LPMFTGFVIMFLSTLIFAF--------GRTYGVLFLARS   91 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~   91 (414)
                      .+++|++..+...+.-...+...++++++|++.||+|.|  +++..+++++.+..+...+        .++.+.+.+.-+
T Consensus       309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~  388 (477)
T PF11700_consen  309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV  388 (477)
T ss_pred             HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence            458999999999999999999999999999999999999  8988888888666655555        678889999999


Q ss_pred             HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHHHHHHHHHHh
Q psy14075         92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGLLQLLL  170 (414)
Q Consensus        92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~  170 (414)
                      +.|+..|..++.+.++.++..|+ ++.+..+|++....-....+||.+.+.+.+..| -|+.+....++.++..++.++.
T Consensus       389 ~~G~~~G~~qs~sRs~~~~LiP~-g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v  467 (477)
T PF11700_consen  389 LIGLFMGGIQSASRSLFSRLIPP-GREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV  467 (477)
T ss_pred             HHHHHhhhHHHHHHHHHHHhCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999995 899999999999999999999999999998876 8999988888887777766555


Q ss_pred             ccC
Q psy14075        171 LQP  173 (414)
Q Consensus       171 ~~~  173 (414)
                      ..|
T Consensus       468 ~~~  470 (477)
T PF11700_consen  468 DVE  470 (477)
T ss_pred             cch
Confidence            443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.27  E-value=3.2e-10  Score=107.52  Aligned_cols=177  Identities=19%  Similarity=0.203  Sum_probs=127.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh----hhhhHHHHHH-HHHH
Q psy14075        193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH----RMGRYLAALL-GLLI  267 (414)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d----~~~~~~~~~~-~~~~  267 (414)
                      ++..+....+...+++.....+++.|+++ +|.++...+.......+..++..++.|+++|    |+|||+..+. +...
T Consensus         5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~   83 (477)
T TIGR01301         5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL   83 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence            34455555566677788888888888765 8999999999999999999999999999999    5999988776 4666


Q ss_pred             HHHHHHHhhhhhhhH-----------------HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch--hhHHhHHHHH
Q psy14075        268 IGICLMMIPLARNIN-----------------HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY--GSVYAIGDVA  328 (414)
Q Consensus       268 ~~i~~~~~~~~~~~~-----------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~  328 (414)
                      ..++++++++.++..                 ...+...+..++.....+   +.-+.+.|..|+++|  +.++++.+..
T Consensus        84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~---p~rALiaDl~p~~~~~~~~a~~~~~~~  160 (477)
T TIGR01301        84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQG---PCRAFLADLTGGDARRTRIANAYFSFF  160 (477)
T ss_pred             HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH---HHHHhcccccCchhHHHHHHHHHHHHH
Confidence            666767776654421                 112222233345554544   334457788877654  6799999999


Q ss_pred             HHHHHhHHHHHHHHH--Hhhh-------------chHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        329 FCLGFAIGPAMSGTL--VNTI-------------GFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       329 ~~~g~~ig~~~~g~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      .++|+.+|+.+.+..  .+.+             +++..|++.+++.+++..+..+..++
T Consensus       161 ~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E  220 (477)
T TIGR01301       161 MAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKE  220 (477)
T ss_pred             HHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence            999999999998865  2221             56788988888877777766655443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR00901 2A0125 AmpG-related permease

Probab=99.25  E-value=1.7e-10  Score=107.32  Aligned_cols=155  Identities=17%  Similarity=0.231  Sum_probs=110.7

Q ss_pred             hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh-----hhHHH-HHHHHHHHHHHHHHhhhhh---hh
Q psy14075        211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM-----GRYLA-ALLGLLIIGICLMMIPLAR---NI  281 (414)
Q Consensus       211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~-~~~~~~~~~i~~~~~~~~~---~~  281 (414)
                      .....|.+.++ .|.|..+.++.... .+...+ .++.|+++||+     ||||. +..+.++.++....+.+.+   +.
T Consensus         7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l   83 (356)
T TIGR00901         7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL   83 (356)
T ss_pred             HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence            44557777776 69999999988654 444444 88999999998     78776 4566666666655555542   33


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--------hHHHH
Q psy14075        282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--------FEWML  353 (414)
Q Consensus       282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--------~~~~~  353 (414)
                      +.+....++.+++.+...+..   .+.+.|..|+++|+.+.++......+|..+++.+.+.+.+..|        |+..|
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~---~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f  160 (356)
T TIGR00901        84 PLLAGLAFLIAFFSATQDIAL---DAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF  160 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence            333344444454444443333   3446788888999999999999999999999999999998888        99999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q psy14075        354 FIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~  371 (414)
                      .+.+++.++..+..++..
T Consensus       161 ~i~ai~~l~~~~~~~~~~  178 (356)
T TIGR00901       161 FWTALLILPGLLVTLFLA  178 (356)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            988887776555544433

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=99.24  E-value=1.1e-07  Score=89.95  Aligned_cols=249  Identities=15%  Similarity=0.040  Sum_probs=163.4

Q ss_pred             chhhhhhhcC-----CcchHHHHHHHHHHHHHHh-hhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh----h------
Q psy14075         18 RENRHKYLMG-----ETKAVGVMFGSKAFVQLLA-NPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG----R------   81 (414)
Q Consensus        18 ~~~~~~~~g~-----s~~~~g~~~s~~~~~~~~~-~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~------   81 (414)
                      +.++++.+..     +...+.++-+...+..++. .++.+++++|++|++++-+....+....+++++.    +      
T Consensus        26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~  105 (472)
T TIGR00769        26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT  105 (472)
T ss_pred             HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence            3455666655     3357899999888877777 9999999999999999988888888777777664    1      


Q ss_pred             ---------------------hHHHHHHHHHHHhhhhhhhhh-hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhh
Q psy14075         82 ---------------------TYGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF  139 (414)
Q Consensus        82 ---------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l  139 (414)
                                           +.|...+..+...+-...... .-.++.+|.++. +|-.|..+++..+.++|.++++.+
T Consensus       106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~-~qakRfy~l~~~ganlg~i~sg~~  184 (472)
T TIGR00769       106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTI-DEAKRFYALFGLGANVALIFSGRT  184 (472)
T ss_pred             HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 134444555566655555554 677899999994 899999999999999999999999


Q ss_pred             hhHhhhh-------c-CCh----hHHHHHHHHHHHHHHHHHHhccCC---C-------C-CCCCCC----chhhhhccCh
Q psy14075        140 GGIMYQF-------V-GKT----APFLILSALALGDGLLQLLLLQPG---V-------V-KQEVEP----PTLKSLVMDP  192 (414)
Q Consensus       140 ~~~l~~~-------~-gw~----~~f~~~~~~~~~~~~~~~~~~~~~---~-------~-~~~~~~----~~~~~~~~~~  192 (414)
                      ..++.+.       . .|.    ..+.+.++..++...+.+.+.+..   +       + ++++++    .+.+.++|+|
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~  264 (472)
T TIGR00769       185 IKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSP  264 (472)
T ss_pred             HHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHhCH
Confidence            8887732       1 232    233333433333333333322111   1       0 011111    2456788999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc----hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075        193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ----QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII  268 (414)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~  268 (414)
                      .+..+++...+++...+.+....-..+.+.+- ++.+    .|.+....++..++..++.+++.+|+|-+....+.-+..
T Consensus       265 yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~  343 (472)
T TIGR00769       265 YILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVM  343 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            98888888888877777766655555665443 3333    233444556666666677789999998776555544433

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.24  E-value=1.9e-10  Score=108.44  Aligned_cols=148  Identities=17%  Similarity=0.082  Sum_probs=115.4

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh------hhhHHHHHHHHH
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF------GRTYGVLFLARS   91 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~r~   91 (414)
                      +.+.+|.|.+++++|++.....+ ...++.++.|++.||+|+||.+..+.++.++..+....      .++.+.+.....
T Consensus       232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (390)
T TIGR02718       232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSA  311 (390)
T ss_pred             hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHH
Confidence            55667889999999999888764 66677899999999999999998877665333332221      233444455556


Q ss_pred             HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075         92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL  166 (414)
Q Consensus        92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~  166 (414)
                      +.+++.+...+...+...+..++++++++.++..+...++|..++|.++|.+.++.|++..|++.+++.++..+.
T Consensus       312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       312 FGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence            667777888777778877777633788999999999999999999999999999999999999888777665443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>KOG2615|consensus

Probab=99.24  E-value=1e-10  Score=103.73  Aligned_cols=117  Identities=24%  Similarity=0.312  Sum_probs=101.2

Q ss_pred             CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075        225 ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMP  304 (414)
Q Consensus       225 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  304 (414)
                      .+..-.|++-+.+++.+.+.++..|.++||+|||.++.+|.+..++.+++...+.+...++..-++.|+.-|..    ..
T Consensus        65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl----~v  140 (451)
T KOG2615|consen   65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL----SV  140 (451)
T ss_pred             ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch----HH
Confidence            34556788889999999999999999999999999999999999999998888888855555577888777655    33


Q ss_pred             hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075        305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN  345 (414)
Q Consensus       305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~  345 (414)
                      .-+++.|..+++.|+.+++.+++...+|-++||.++|++..
T Consensus       141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence            44567788889999999999999999999999999999987

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.24  E-value=5.6e-10  Score=107.60  Aligned_cols=184  Identities=17%  Similarity=0.275  Sum_probs=133.8

Q ss_pred             hhccChHHHHHHHHHHHHHH----HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHH
Q psy14075        187 SLVMDPYILIAAGAITFANT----GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAAL  262 (414)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~  262 (414)
                      ..+++|+++.......+...    ........++....+ +|-+ ....++.....++..++.++.|+++|.+|||...+
T Consensus        35 g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i  112 (599)
T PF06609_consen   35 GYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFI  112 (599)
T ss_pred             CceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHH
Confidence            34567776655443333222    222223334544444 6765 46677888888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075        263 LGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT  342 (414)
Q Consensus       263 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~  342 (414)
                      .+.++..++.++...+++...++....+.|++.|..... .   ..+.|..|.+.|+...++.....-....++|.+...
T Consensus       113 ~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~-~---~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~  188 (599)
T PF06609_consen  113 IGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELA-A---LAISELVPNKWRGLGLAIASIPFIITTWISPLIAQL  188 (599)
T ss_pred             HHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHH-H---HHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHH
Confidence            999999999999999999999999999999987766321 1   125688888888877776665544555567777777


Q ss_pred             HHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        343 LVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       343 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                      +..+.+|||.|++..+...++++..+++.+++++
T Consensus       189 ~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~  222 (599)
T PF06609_consen  189 FAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPR  222 (599)
T ss_pred             hccCCCcchHHHHHHHHHHHHHHHHHHHhCCCch
Confidence            6666789999999988888877766666555443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.23  E-value=5.3e-10  Score=120.07  Aligned_cols=157  Identities=8%  Similarity=-0.036  Sum_probs=118.2

Q ss_pred             hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc--chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHH
Q psy14075        187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW--QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLG  264 (414)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~  264 (414)
                      +.++++.++.+.+..++..+........+..++...++.+..  ..++..+.+.++.+++.++.|+++||+|||+++..+
T Consensus         4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~   83 (1146)
T PRK08633          4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIV   83 (1146)
T ss_pred             chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHH
Confidence            467778887777777776665555544454455544555433  357778888899999999999999999999999888


Q ss_pred             HHHHHHHHHHhhh---hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075        265 LLIIGICLMMIPL---ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG  341 (414)
Q Consensus       265 ~~~~~i~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g  341 (414)
                      ..+..+..++..+   .++.+.+++..++.|++.+...+....   .+.+..|+++|++++|+.+....+|..+|+.+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~---~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~  160 (1146)
T PRK08633         84 KLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG---IIPELVGKENLSRANGLLEAFTIVAILAGTALFS  160 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh---hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHH
Confidence            7665554443332   345677777788888888877655443   4668888899999999999999999999999999


Q ss_pred             HHHhh
Q psy14075        342 TLVNT  346 (414)
Q Consensus       342 ~l~~~  346 (414)
                      ++.+.
T Consensus       161 ~l~~~  165 (1146)
T PRK08633        161 FLFES  165 (1146)
T ss_pred             HHHHh
Confidence            99876

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=99.21  E-value=7.8e-10  Score=95.37  Aligned_cols=152  Identities=17%  Similarity=0.172  Sum_probs=119.1

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-------hhHHHHHHHH
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-------RTYGVLFLAR   90 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~l~~~r   90 (414)
                      .|++++.+|.|.+|...+.++..+|..+ .++.|.+.||+|++.++.+|.+...++..+...+       .++|.+.+..
T Consensus        25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~  103 (250)
T PF06813_consen   25 SPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFL  103 (250)
T ss_pred             hHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHH
Confidence            5889999999999999999999999987 5889999999999999999999999999887653       3678888888


Q ss_pred             HHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHH-HHHHHHHHHH
Q psy14075         91 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL-ALGDGLLQLL  169 (414)
Q Consensus        91 ~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~-~~~~~~~~~~  169 (414)
                      ++.|.+.+....+......+.||  ++||++.|+.-...+++..+-..+...+.+.-.-+. +.+.+.. .++..+...+
T Consensus       104 ~l~~~s~~~~~ta~lvt~~~NFP--~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f-ll~la~~~~~v~l~~~~~  180 (250)
T PF06813_consen  104 FLGGNSSCWFNTASLVTCVRNFP--RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF-LLFLAVLPAVVCLVAMFF  180 (250)
T ss_pred             HHHcccHHHhhhHHHHHHHHhCc--cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHhhh
Confidence            89888888777777777778887  589999999999999998888777766655422333 3344443 3333444444


Q ss_pred             hccC
Q psy14075        170 LLQP  173 (414)
Q Consensus       170 ~~~~  173 (414)
                      .++.
T Consensus       181 vr~~  184 (250)
T PF06813_consen  181 VRPV  184 (250)
T ss_pred             eecc
Confidence            4433

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=99.21  E-value=9.5e-08  Score=89.29  Aligned_cols=303  Identities=16%  Similarity=0.098  Sum_probs=187.5

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh--------h-------hHHHHHHHHHHHhhh
Q psy14075         32 VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--------R-------TYGVLFLARSLQGIG   96 (414)
Q Consensus        32 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~-------~~~~l~~~r~l~G~~   96 (414)
                      .+...-.-.+...+.++..|.+.||..|.++...+.+.--++..+++..        +       ..+.+++.-.+.|.-
T Consensus        40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i  119 (432)
T PF06963_consen   40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI  119 (432)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence            3444444566778889999999999999999888766654444333221        1       112222222222221


Q ss_pred             hhh-hhhhHHHHHhhcC------CCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075         97 SSC-SSVSGMGMLAERY------PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL  169 (414)
Q Consensus        97 ~~~-~~~~~~~~i~~~~------~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~  169 (414)
                      .-. ......+.-.||.      + ++++.+.++.+.-.-.+.-+++|++.|.+.+..+.+....+.++..++..++-++
T Consensus       120 ~~Las~~~~iavERDWVvvi~~~~-~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~  198 (432)
T PF06963_consen  120 ERLASIANTIAVERDWVVVIAGGD-PGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF  198 (432)
T ss_pred             HHHHHhhhhheeccchhhhhcCCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence            111 1122223333443      3 3667888888888899999999999999999899998888888888887776554


Q ss_pred             hcc------------CCCCCCC-C---C----------------------CchhhhhccChHHHHHHHHHHHHHHHHHhh
Q psy14075        170 LLQ------------PGVVKQE-V---E----------------------PPTLKSLVMDPYILIAAGAITFANTGIAML  211 (414)
Q Consensus       170 ~~~------------~~~~~~~-~---~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (414)
                      +..            +++++.+ +   +                      ..+|+..+++|.+... +...+.++....+
T Consensus       199 ~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas-~alalLY~TVLsf  277 (432)
T PF06963_consen  199 LLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLAS-FALALLYFTVLSF  277 (432)
T ss_pred             HHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHH-HHHHHHHHHHhcC
Confidence            431            1100000 0   0                      0123344555544433 3333333444556


Q ss_pred             hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh---hhhh-h-HHHHH
Q psy14075        212 EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP---LARN-I-NHLIV  286 (414)
Q Consensus       212 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~---~~~~-~-~~~~~  286 (414)
                      ...+..|+..+ |+++...|.+-+...+.++.+.++..++.+|+|..|.-.++.....+++.+..   +.+. . ...-.
T Consensus       278 ~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~  356 (432)
T PF06963_consen  278 GGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA  356 (432)
T ss_pred             cHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence            77788888886 99999999999999999999999999999999998887777776655443322   1211 1 11122


Q ss_pred             HHHHHHHHH--HhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHH
Q psy14075        287 PNAGLGFAI--GMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGP  337 (414)
Q Consensus       287 ~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~  337 (414)
                      ..++.|+..  -..+..-....+...|..|+++||...|.-+..+++-..+--
T Consensus       357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~  409 (432)
T PF06963_consen  357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSF  409 (432)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence            222222221  112222233334466888999999999999888887666533

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG2532|consensus

Probab=99.20  E-value=1.2e-10  Score=110.35  Aligned_cols=150  Identities=19%  Similarity=0.280  Sum_probs=131.5

Q ss_pred             HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--hHHHHHHHHHHHHHHHhh
Q psy14075        221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN--INHLIVPNAGLGFAIGMV  298 (414)
Q Consensus       221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~g~~~~~~  298 (414)
                      .++.+++.+-+++++....+.+++.+..+++.||+|.|+++..+.++.+++.++.+++.+  .+.+++.-++.|++.+..
T Consensus        66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~  145 (466)
T KOG2532|consen   66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL  145 (466)
T ss_pred             ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence            357788889999999999999999999999999999999999999999999999888653  345677888999999988


Q ss_pred             hhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        299 DSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-IGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      +|.....   ..+-.|+++|++..++.....++|..++.++.|.+.+. .||+..|++.+++.++..++++.+..+
T Consensus       146 ~pa~~~i---~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d  218 (466)
T KOG2532|consen  146 FPAIGSI---LAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD  218 (466)
T ss_pred             Hhhhhce---eeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence            7766544   56778899999999999999999999999999999998 999999999999988887777666553

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.18  E-value=4.4e-09  Score=94.58  Aligned_cols=167  Identities=16%  Similarity=0.215  Sum_probs=129.6

Q ss_pred             HHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh---
Q psy14075        201 ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL---  277 (414)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~---  277 (414)
                      ++...+........+| .+++.++.+..++++.......+..+.++..+++.+|+|+|+-++.++.++++++.++.-   
T Consensus        22 Ffl~G~~~~l~diLip-~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~  100 (422)
T COG0738          22 FFLWGFITCLNDILIP-HLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS  100 (422)
T ss_pred             HHHHHHHhhcchhhHH-HHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence            3333344444444555 578889999999999999999999999999999999999999999999999999888853   


Q ss_pred             hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-----------
Q psy14075        278 ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-----------  346 (414)
Q Consensus       278 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----------  346 (414)
                      ..++..++...++.+.|.+......++.++...   +++....-+.+.+.+..+|+.++|.+.+.+..+           
T Consensus       101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg---~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~  177 (422)
T COG0738         101 SKSYGFFLVALFILASGIGLLETAANPYVTLLG---KPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI  177 (422)
T ss_pred             hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC---CchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence            446667778888999999999888887765444   455557788889999999999999999998873           


Q ss_pred             --------hchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        347 --------IGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       347 --------~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                              -.++..|...+...++..+.....+
T Consensus       178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k  210 (422)
T COG0738         178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSK  210 (422)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence                    1256667766666665555544444

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.15  E-value=4.4e-10  Score=101.60  Aligned_cols=150  Identities=21%  Similarity=0.224  Sum_probs=130.0

Q ss_pred             hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075         23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV  102 (414)
Q Consensus        23 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~  102 (414)
                      +++|++..++.++.-...+..+++++++|++.||+|.|+++..+++++.+.++..-+...-..+.++-.+.|...|..+.
T Consensus       281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA  360 (438)
T COG2270         281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA  360 (438)
T ss_pred             HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence            48999999999999999999999999999999999999999999999999888887777766777777899999999999


Q ss_pred             hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075        103 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus       103 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      .+.++.++..|+ ++-++.+|+++...-.+..+||.+.+.+.+..| -|..+....++..+..++.++.+.+
T Consensus       361 ~SRSy~~~lvp~-~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~  431 (438)
T COG2270         361 SSRSYLARLVPK-GKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP  431 (438)
T ss_pred             HHHHHHHHhCCC-ccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence            999999999995 999999999999999999999999999887654 6776666666655555554444433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.12  E-value=7.8e-10  Score=105.93  Aligned_cols=123  Identities=18%  Similarity=0.239  Sum_probs=105.6

Q ss_pred             CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075         28 ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-RTYGVLFLARSLQGIGSSCSSVSGMG  106 (414)
Q Consensus        28 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~  106 (414)
                      ++.+.+++.+...++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+.+..++.|++.+...+...+
T Consensus       255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  334 (437)
T TIGR00792       255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA  334 (437)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45567888888899999999999999999999999999999888888777665 46677777888899999999998899


Q ss_pred             HHhhcCCC------cchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCCh
Q psy14075        107 MLAERYPD------DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT  150 (414)
Q Consensus       107 ~i~~~~~~------~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~  150 (414)
                      +++|..+.      ++++|..+|+.+....+|..+++.+.+.+.+..||.
T Consensus       335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~  384 (437)
T TIGR00792       335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV  384 (437)
T ss_pred             HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            99887641      256799999999999999999999999999887773

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG0637|consensus

Probab=99.10  E-value=7.5e-10  Score=100.67  Aligned_cols=327  Identities=17%  Similarity=0.157  Sum_probs=191.7

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCchhHH-HHHHHHHHHHHHHHhhhhHH--------
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYSLPMF-TGFVIMFLSTLIFAFGRTYG--------   84 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l~-~~~~~~~~~~~~~~~~~~~~--------   84 (414)
                      .|++.+++|.+....+.+--+..+...+.||+.|..+||    |||||.++ .+.+..+++.++..++.++.        
T Consensus        55 ~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~  134 (498)
T KOG0637|consen   55 LTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER  134 (498)
T ss_pred             ccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence            377788899999888888888889999999999999996    89887755 56677778888888876643        


Q ss_pred             ---------HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhH-HHHHHHHHHhhhhhhchhhhhHhhhhcCChh--H
Q psy14075         85 ---------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGN-AMGIALGGLALGVLIGPPFGGIMYQFVGKTA--P  152 (414)
Q Consensus        85 ---------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~-~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~--~  152 (414)
                               .+++.--+.-+..-....+..+++.|...+ +++.+ +++.+..+..+|..+|..++++    .+|+-  +
T Consensus       135 ~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~-d~~~~~Ans~f~~f~avGnvLGY~~g~y----~~~~~~~~  209 (498)
T KOG0637|consen  135 KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARG-DAKKTRANSVFSFFMAVGNVLGYALGSY----LGLYKIFP  209 (498)
T ss_pred             cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccC-hhhhhccchhHHHHHHhcceeeeecccc----cCceEEee
Confidence                     233333444455556777788999999985 56666 9999999999999999998874    34432  2


Q ss_pred             HHHHHHHHHHHHHHHHHh-------c----------cCCCCCCCC-----CC---chh----hhhc-cChHHHHHHHHHH
Q psy14075        153 FLILSALALGDGLLQLLL-------L----------QPGVVKQEV-----EP---PTL----KSLV-MDPYILIAAGAIT  202 (414)
Q Consensus       153 f~~~~~~~~~~~~~~~~~-------~----------~~~~~~~~~-----~~---~~~----~~~~-~~~~~~~~~~~~~  202 (414)
                      |......-+.+..+-..+       .          ++++...+.     +.   ...    ..+. ..|..+.+++...
T Consensus       210 Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~l  289 (498)
T KOG0637|consen  210 FTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTL  289 (498)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCcchHHHHhchHhhCChhHHHHHHHHH
Confidence            333222222222211111       0          111111110     00   001    1111 2356778888888


Q ss_pred             HHHHHHHhhhhchHHHHH-HHhCCCccc----------------hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHH
Q psy14075        203 FANTGIAMLEPSLPIWMM-DTMGADKWQ----------------QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGL  265 (414)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~----------------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~  265 (414)
                      +.+.+...+..+...++- +.++-++..                -.+=+.++.+...+-+....+++||+|.|+.++.+.
T Consensus       290 ltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~  369 (498)
T KOG0637|consen  290 LTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGV  369 (498)
T ss_pred             HHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehh
Confidence            888887777766666653 334433321                123344556666667788889999999555444444


Q ss_pred             HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhh-hh--------------------hhcccccchhhHHhH
Q psy14075        266 LIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELG-YL--------------------VDIRHTAVYGSVYAI  324 (414)
Q Consensus       266 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~g~~~g~  324 (414)
                      ....++..+....++.+....-.-..|+-.+.....-....+ +.                    .+.... -+|...|+
T Consensus       370 ~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~-g~G~~~gv  448 (498)
T KOG0637|consen  370 NAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGL-GQGLDLGV  448 (498)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccC-CCCceeee
Confidence            434444434443333322222222222111111110000000 00                    111111 22666777


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075        325 GDVAFCLGFAIGPAMSGTLVNTIGFE  350 (414)
Q Consensus       325 ~~~~~~~g~~ig~~~~g~l~~~~g~~  350 (414)
                      .|....+...+.....|.+.+..|-.
T Consensus       449 ln~~I~ipQvivs~~~Gp~~~~~G~~  474 (498)
T KOG0637|consen  449 LNCAIVIPQVLVSLGLGPLDQLFGGG  474 (498)
T ss_pred             eeeeeeehhheeeccccchhhhcCCc
Confidence            77777888888888888888888733

>KOG4332|consensus

Probab=99.09  E-value=8.4e-09  Score=87.24  Aligned_cols=332  Identities=17%  Similarity=0.122  Sum_probs=182.8

Q ss_pred             hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075         23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV  102 (414)
Q Consensus        23 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~  102 (414)
                      +.+|....|+|.+.-+..-..++...+.|.++||-||||.-+.-.+.+.+++ +.-.+++|..++++|++-|+..+..+.
T Consensus        65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFS  143 (454)
T KOG4332|consen   65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFS  143 (454)
T ss_pred             hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHH
Confidence            5678888899999888888899999999999999999997555444443332 233578899999999999999999888


Q ss_pred             hHHHHH-hhcCCCcchhhHHHHHHH--------HHHhhhhhhchhhhhHhhhhc--CChhHHHHHHHHHHHHHHHHHHhc
Q psy14075        103 SGMGML-AERYPDDRERGNAMGIAL--------GGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus       103 ~~~~~i-~~~~~~~~~r~~~~~~~~--------~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      +--++. .|..   ++|+.-.-+..        .++.+-.+++.+.+..+.+.+  |.-.+|-..+.+..+...+.+.-.
T Consensus       144 aFEsWliaEHn---ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W  220 (454)
T KOG4332|consen  144 AFESWLIAEHN---EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSW  220 (454)
T ss_pred             HHHHHHHHHhh---hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhh
Confidence            877754 4443   34443333322        233444555556666666664  455566554443333332222222


Q ss_pred             cCCCCCCCCCCch--------hhhhccChHHHHHHHHHHH-HHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHH
Q psy14075        172 QPGVVKQEVEPPT--------LKSLVMDPYILIAAGAITF-ANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYL  242 (414)
Q Consensus       172 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~  242 (414)
                      .|.-.+ +.++++        .+.+..|+++.++.....+ -...+.....|.|..-.+..+   .--|.+++.+.++.+
T Consensus       221 ~ENygd-ps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASm  296 (454)
T KOG4332|consen  221 SENYGD-PSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASM  296 (454)
T ss_pred             hhccCC-hhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHH
Confidence            222111 111122        2334556665554433333 333333444566653211112   224788888888999


Q ss_pred             hhhhhhhhhhhhhhh--HHHHHHHHHHHHHHHHHhhhh----h---hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075        243 IGTNLFGPLGHRMGR--YLAALLGLLIIGICLMMIPLA----R---NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR  313 (414)
Q Consensus       243 ~~~~~~g~l~d~~~~--~~~~~~~~~~~~i~~~~~~~~----~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  313 (414)
                      +|+-+..++..|-..  ...+.+.+....+.+.+....    +   +...-.+..+++-.+.|..+|...-+   -.+..
T Consensus       297 LGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkm---RsqyI  373 (454)
T KOG4332|consen  297 LGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKM---RSQYI  373 (454)
T ss_pred             HhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHH---HHhhC
Confidence            998888777765433  344455555444443332221    1   12223445555556667665544322   33556


Q ss_pred             cccchhhHHhHHHHHHHHHHhHHHHHHHHHHh--hhchHHHHHHHHHHHHHHHHHH
Q psy14075        314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN--TIGFEWMLFIIAILDFMYAPLL  367 (414)
Q Consensus       314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~--~~g~~~~~~~~~~~~~~~~~~~  367 (414)
                      |.+.|++.+-.+..--++-.-++-+.  .-.|  ..+-+..|-++......+.+..
T Consensus       374 PEearstimNfFRvPLnifvClvLyn--lh~~~~p~~tr~mf~icS~~~~~a~i~~  427 (454)
T KOG4332|consen  374 PEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTTTRNMFGICSAFLFVASILQ  427 (454)
T ss_pred             CHHHHhhhhhheechhhHhhhhhhee--cccccCccccchhhhhhHHHHHHHHHHH
Confidence            67666666554432222211111110  0011  1234577777766666554443

>TIGR01272 gluP glucose/galactose transporter

Probab=99.07  E-value=3e-09  Score=96.54  Aligned_cols=131  Identities=11%  Similarity=0.015  Sum_probs=109.8

Q ss_pred             hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q psy14075         25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSG  104 (414)
Q Consensus        25 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~  104 (414)
                      +|.++++.++..+.+..+..++.+..+++.||+|+||.+.++..+..++.++....++...+ ..-++.|++.+..+|..
T Consensus       173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~  251 (310)
T TIGR01272       173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTI  251 (310)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999888888887766665554433 35568899999999999


Q ss_pred             HHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHH
Q psy14075        105 MGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL  159 (414)
Q Consensus       105 ~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~  159 (414)
                      .+...+..|  ++.+++.++. ....+|..+.|++.|.+.|..|.+.+|++..+.
T Consensus       252 ~s~a~~~~~--~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~  303 (310)
T TIGR01272       252 FSLALNALG--RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC  303 (310)
T ss_pred             HHHHHhhhh--hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence            999989886  4566777775 566799999999999999999999988755444

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=99.06  E-value=3.8e-07  Score=82.39  Aligned_cols=146  Identities=27%  Similarity=0.393  Sum_probs=121.6

Q ss_pred             cchhhhhhhcCCc--chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHH
Q psy14075         17 ARENRHKYLMGET--KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT--YGVLFLARSL   92 (414)
Q Consensus        17 ~~~~~~~~~g~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l   92 (414)
                      ..+.+..+++.+.  .+.++..+.+.++..+++++.|.+.||+|||+.+..+.....++.++.++..+  .+.+.+.|+.
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (338)
T COG0477          24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLL  103 (338)
T ss_pred             HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence            3455666666666  58899999999999999999999999999999988888776677777777776  9999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCc-chhhHHHHHHHH-HHhhhhhhchhhhhHhhhh--cCChhHHHHHHHHHHHH
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDD-RERGNAMGIALG-GLALGVLIGPPFGGIMYQF--VGKTAPFLILSALALGD  163 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~-~~r~~~~~~~~~-~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~  163 (414)
                      +|++.+...+...+++.|++| + ++|+...+.... ...+|..+++.+++.+...  .+||..|..........
T Consensus       104 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (338)
T COG0477         104 QGLGGGGLLPVASALLSEWFP-EATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL  177 (338)
T ss_pred             HHhhhHHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence            999999999999999999997 4 479999999988 6888999999887777654  57999777776665443

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.03  E-value=9e-09  Score=96.36  Aligned_cols=155  Identities=19%  Similarity=0.297  Sum_probs=124.5

Q ss_pred             hhhhhhhc-CCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-hhHHHHHH----HHHH
Q psy14075         19 ENRHKYLM-GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-RTYGVLFL----ARSL   92 (414)
Q Consensus        19 ~~~~~~~g-~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~----~r~l   92 (414)
                      +.+-+|.| .+....+.+.+...++-...-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+    ...+
T Consensus       231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~l  310 (400)
T PF03825_consen  231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLL  310 (400)
T ss_pred             HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhh
Confidence            34456777 667778888888888899999999999999999999999999999998888887 55444333    3456


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHH-HhhhhhhchhhhhHhhhhcCCh------hHHHHHHHHHHHHHH
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGG-LALGVLIGPPFGGIMYQFVGKT------APFLILSALALGDGL  165 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~l~~~l~~~~gw~------~~f~~~~~~~~~~~~  165 (414)
                      +|+..+..+.+...++.+..|+ +.|+++.++++.. .++|..+|..++|++.+++|-+      ..+.+.+.+.++..+
T Consensus       311 hG~tf~~~~~a~~~yi~~~~p~-~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~  389 (400)
T PF03825_consen  311 HGLTFGLFHAASVRYIDRIAPP-ELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILV  389 (400)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCc-cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999995 9999999998764 6899999999999999987644      455556665555555


Q ss_pred             HHHHhccCC
Q psy14075        166 LQLLLLQPG  174 (414)
Q Consensus       166 ~~~~~~~~~  174 (414)
                      +.+++.+|+
T Consensus       390 ~f~~~fk~~  398 (400)
T PF03825_consen  390 LFVILFKPK  398 (400)
T ss_pred             HHHhhccCC
Confidence            555554443

>KOG2504|consensus

Probab=99.02  E-value=5.2e-09  Score=100.58  Aligned_cols=174  Identities=18%  Similarity=0.131  Sum_probs=134.2

Q ss_pred             HHHHHHHHHHHHHHHHhh----hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAML----EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIG  269 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~  269 (414)
                      -|.+++..++......++    ..+.+. +++.++.+..+++++.++......+..++.+.+.||+|.|.+.+.|.++..
T Consensus        44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~-~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~  122 (509)
T KOG2504|consen   44 GWVVVFASFLVNLSTDGLINSFGLLFEE-LMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA  122 (509)
T ss_pred             eeeeeHhHHHHHHhhhcchheehhhHHH-HHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence            344555554444333332    223333 455688888889999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhhHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075        270 ICLMMIPLARNINHLIV-PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG  348 (414)
Q Consensus       270 i~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g  348 (414)
                      +++++..++++.+.+++ ..++.|+|.++.+....   ..+. ..-+++|+.++|+......+|..+-|.+.-++.+.+|
T Consensus       123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~pai---viv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G  198 (509)
T KOG2504|consen  123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAV---VILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG  198 (509)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchh---hhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence            99999999998876644 56677777777644333   3233 3445678999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        349 FEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      |++.+...+.+.+-.++.....++
T Consensus       199 ~r~~~l~~~~~~l~~~~~~~~~rp  222 (509)
T KOG2504|consen  199 WRGALLIFGGISLNVLVAGALLRP  222 (509)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCC
Confidence            999999988888776666666665

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.99  E-value=3.3e-07  Score=90.72  Aligned_cols=150  Identities=13%  Similarity=0.130  Sum_probs=123.7

Q ss_pred             hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhh--------HHHHHHHH
Q psy14075         20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRT--------YGVLFLAR   90 (414)
Q Consensus        20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~r   90 (414)
                      .+.+.+|.+.++...+...+....-+..+++|.++|+ +||++.+.++.++..++..+.++...        ....+++-
T Consensus        13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gL   92 (654)
T TIGR00926        13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGL   92 (654)
T ss_pred             HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHH
Confidence            3456789999999899998888888999999999997 89999999999999999988876421        23355667


Q ss_pred             HHHhhhhhhhhhhHHHHHhhcCCCc--chhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-------CChhHHHHHHHHHH
Q psy14075         91 SLQGIGSSCSSVSGMGMLAERYPDD--RERGNAMGIALGGLALGVLIGPPFGGIMYQFV-------GKTAPFLILSALAL  161 (414)
Q Consensus        91 ~l~G~~~~~~~~~~~~~i~~~~~~~--~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~~f~~~~~~~~  161 (414)
                      .+..+|.|..-|...+...|.++++  ++|-+.+.++..+.++|+.+++++..++.+..       +|...|.+.++..+
T Consensus        93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~  172 (654)
T TIGR00926        93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI  172 (654)
T ss_pred             HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence            7888999999999999999999742  24778889999999999999999999887543       69999999998888


Q ss_pred             HHHHHHHH
Q psy14075        162 GDGLLQLL  169 (414)
Q Consensus       162 ~~~~~~~~  169 (414)
                      +..+....
T Consensus       173 ia~lvf~~  180 (654)
T TIGR00926       173 LALIVFMA  180 (654)
T ss_pred             HHHHHHHH
Confidence            77666544

>TIGR00788 fbt folate/biopterin transporter

Probab=98.99  E-value=3.2e-08  Score=95.25  Aligned_cols=175  Identities=13%  Similarity=0.071  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh-----hHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG-----RYLAALLGLLII  268 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~  268 (414)
                      .......++..... ......++.++++.+|.+..+.+.+.+...+...+-. +.|.++||++     ||+.+.++.++.
T Consensus        28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~  105 (468)
T TIGR00788        28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLLG  105 (468)
T ss_pred             HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHHH
Confidence            33444456666666 6666777888888899999999888888888888754 4999999996     666666666655


Q ss_pred             -HHHHHHhhhhhhhHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhhccc--ccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075        269 -GICLMMIPLARNINHLI-VPNAGLGFAIGMVDSSMMPELGYLVDIRH--TAVYGSVYAIGDVAFCLGFAIGPAMSGTLV  344 (414)
Q Consensus       269 -~i~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~  344 (414)
                       .+++..+...++..... ...++.+++.+......-..   ..|..+  ++.++...+.......+|..+++.+.|.+.
T Consensus       106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~---~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~  182 (468)
T TIGR00788       106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSL---YSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLL  182 (468)
T ss_pred             HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHH---HhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence             34444444333322222 34556666666654444443   344433  222233444444555689999999999999


Q ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        345 NTIGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                      +.++|+..|++.+.+.++......+++++
T Consensus       183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~  211 (468)
T TIGR00788       183 DKTLTRILFLITAALLLLQLFVSNLSKER  211 (468)
T ss_pred             HhcCcchHHHHHHHHHHHHHHHHHhcccc
Confidence            99999999999888877775555555443

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG0254|consensus

Probab=98.98  E-value=2.8e-08  Score=97.06  Aligned_cols=141  Identities=23%  Similarity=0.339  Sum_probs=118.8

Q ss_pred             hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy14075        230 QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYL  309 (414)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  309 (414)
                      .+++.+...++..++.++.|+++|++|||+.++++.+...++.++..++++...+.+.-++.|++.|......+   .+.
T Consensus        91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~p---iy~  167 (513)
T KOG0254|consen   91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAP---VYI  167 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcch---hhH
Confidence            37999999999999999999999999999999999999999999999999999999999999999998864333   357


Q ss_pred             hhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh--chHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075        310 VDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI--GFEWMLFIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       310 ~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (414)
                      .|..|++.||...+..+....+|..++ ++.+...++.  +|+..+.+..+.+++..+..++.++.+
T Consensus       168 sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp  233 (513)
T KOG0254|consen  168 SEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP  233 (513)
T ss_pred             hhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence            788899999999999999888888887 6666666543  899888887777777776655555433

>KOG0255|consensus

Probab=98.98  E-value=4.8e-09  Score=102.79  Aligned_cols=146  Identities=21%  Similarity=0.289  Sum_probs=124.2

Q ss_pred             HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhh
Q psy14075        221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDS  300 (414)
Q Consensus       221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  300 (414)
                      +....+.....+..+++.++..+|.++.|.++||+|||+++..+..+..++.+...++++.+...+.-++.|++.+....
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~  190 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT  190 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence            33556677788888999999999999999999999999999999999999999999999999999999999999887754


Q ss_pred             hhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        301 SMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ...   ....|..+++.|+.+..+ ......++.+++...+++..  +|++.+++..+...+.++..++.++
T Consensus       191 ~~~---~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~E  256 (521)
T KOG0255|consen  191 VGF---GLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPE  256 (521)
T ss_pred             HhH---hhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCc
Confidence            444   346799999999999999 77888899999999999887  8999999888887777666444434

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=98.97  E-value=1.3e-06  Score=80.38  Aligned_cols=304  Identities=15%  Similarity=0.099  Sum_probs=179.7

Q ss_pred             CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHH
Q psy14075         28 ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM  107 (414)
Q Consensus        28 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~  107 (414)
                      +.--.+.+.-+..+...+..+.+.+..+|...+.=.....++..++.++.+++++.+.=+++-++.+++.|..-....++
T Consensus        57 ~~~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l  136 (402)
T PF02487_consen   57 KSVSTGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL  136 (402)
T ss_pred             CcccchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH
Confidence            33345667777778888888889999999887666667777888899999999999998999999999999888877776


Q ss_pred             HhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC--hhHHHHHHHHHHHHHHHHHHhccCCCCCCC----C-
Q psy14075        108 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK--TAPFLILSALALGDGLLQLLLLQPGVVKQE----V-  180 (414)
Q Consensus       108 i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~-  180 (414)
                      .. .++  +   ...+-+..+.+.++++|+..-..+.+ .++  |..+.+...+.++..+..++.+++++.+++    + 
T Consensus       137 t~-~y~--~---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~  209 (402)
T PF02487_consen  137 TH-FYG--K---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES  209 (402)
T ss_pred             HH-hcC--c---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC
Confidence            54 554  2   35788888888888888887766666 555  778888877776666555555442211100    0 


Q ss_pred             -----C-----C-----------chhhhhcc-ChHHHHHHHHHHHHHHHHHhhh-hchHHHH-HHHhCCCccchhhHhHH
Q psy14075        181 -----E-----P-----------PTLKSLVM-DPYILIAAGAITFANTGIAMLE-PSLPIWM-MDTMGADKWQQGVSFLP  236 (414)
Q Consensus       181 -----~-----~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~~~~~g~~~~~  236 (414)
                           +     +           .++++-++ -|.+....+-.+...+..+.++ ...|... .....-...+..++...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~  289 (402)
T PF02487_consen  210 EDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLL  289 (402)
T ss_pred             CCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHH
Confidence                 0     0           00111111 1111111111122222222221 1222221 11111123345566667


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH---HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075        237 ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM---MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR  313 (414)
Q Consensus       237 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  313 (414)
                      +.++..+++--...+  |+++.+++.+--.+..+.++   .+-+.++.|...+.++.-|+.-|..+...   ...+.+..
T Consensus       290 YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt---F~~I~~~~  364 (402)
T PF02487_consen  290 YQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT---FYRISEEV  364 (402)
T ss_pred             HHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH---HHHHHhcC
Confidence            777777776543222  33333322222222211111   12234567776677777787777764433   34456777


Q ss_pred             cccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075        314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTL  343 (414)
Q Consensus       314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l  343 (414)
                      ++++|-.++|.......+|..++..+.=++
T Consensus       365 ~~~~REFslg~vsvsds~GI~lAgll~l~l  394 (402)
T PF02487_consen  365 PPEDREFSLGAVSVSDSLGILLAGLLGLPL  394 (402)
T ss_pred             CHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            888999999998887777777766665443

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>KOG2533|consensus

Probab=98.97  E-value=7.6e-09  Score=98.52  Aligned_cols=149  Identities=16%  Similarity=0.182  Sum_probs=122.3

Q ss_pred             HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhh
Q psy14075        221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDS  300 (414)
Q Consensus       221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  300 (414)
                      +..++...+.+...+.+.++.+++.+.++.+.||++..+.+....++.++..++....++.+.+++..++.|+..+..+|
T Consensus        74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP  153 (495)
T KOG2533|consen   74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWP  153 (495)
T ss_pred             cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccch
Confidence            44667788899999999999999999999999999977777666666665555555578899999999999999999877


Q ss_pred             hhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh------hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        301 SMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN------TIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      .....   +..-+.+++||..+|+.+....+|+++|+.+...+.+      ..||++.|++-+++.+...++.++..+
T Consensus       154 ~~~~~---lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp  228 (495)
T KOG2533|consen  154 GVVAI---LGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP  228 (495)
T ss_pred             HHHHH---HHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence            65544   5567778899999999999999999999999988643      468999999999888887766655433

>KOG3574|consensus

Probab=98.96  E-value=1.9e-07  Score=83.07  Aligned_cols=326  Identities=13%  Similarity=0.042  Sum_probs=205.6

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc-----ccCCchhHHH-HHHHHHHHHHHHHh-----------
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH-----RVGYSLPMFT-GFVIMFLSTLIFAF-----------   79 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~~~~~~~~~~~~~~-----------   79 (414)
                      .+|.+.+.-|.|.++.+...-+ +..+. --++|.++.|     |+||||..++ ...+.+....+.+.           
T Consensus        52 ~iP~lL~ak~vSyt~~a~fS~a-y~P~s-LKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~  129 (510)
T KOG3574|consen   52 AIPLLLQAKGVSYTSQAIFSFA-YWPFS-LKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG  129 (510)
T ss_pred             hhHHHhcCCCcchhhhhhhhhh-hhHHH-HHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence            4577777778888887765433 22332 2678999999     9999987543 44444444443332           


Q ss_pred             hhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCCh--
Q psy14075         80 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKT--  150 (414)
Q Consensus        80 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~--  150 (414)
                      .++...+....++.-+.++.-..+.-.+.-...+ +++.|-+......+.+.|..++..+--.+.+       ..+|.  
T Consensus       130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs-~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~  208 (510)
T KOG3574|consen  130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLS-RENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLD  208 (510)
T ss_pred             CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcC-HhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCc
Confidence            1233334445566677777778888888888888 4899999888888888888887655433322       11332  


Q ss_pred             -------hHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC--------chhhhhccChHHHHHHHHHHHHHHHHHhhhhch
Q psy14075        151 -------APFLILSALALGDGLLQLLLLQPGVVKQEVEP--------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSL  215 (414)
Q Consensus       151 -------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (414)
                             ...++.+.+.++...+..+..+|++++..++.        +-++++++-|.+..........-.++.+-....
T Consensus       209 ~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t  288 (510)
T KOG3574|consen  209 QGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALT  288 (510)
T ss_pred             cceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhcc
Confidence                   34556666666766666666665544321111        134566777777777777777778888888888


Q ss_pred             HHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh------hhhHHHHHHHHHHHHHHHHHhhhhhh---------
Q psy14075        216 PIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR------MGRYLAALLGLLIIGICLMMIPLARN---------  280 (414)
Q Consensus       216 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~------~~~~~~~~~~~~~~~i~~~~~~~~~~---------  280 (414)
                      +.-+.| .|.+..+.++......-.+++.....|++...      +-|+....+.......  ++..+.++         
T Consensus       289 ~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t--~Lv~~~~~~~~~~G~~~  365 (510)
T KOG3574|consen  289 SLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQT--ALVWWTPTLGHSDGTFP  365 (510)
T ss_pred             chHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHH--HHHhhhcccccCCCcee
Confidence            888888 59998888777655555666666666655432      1122222222222211  12222111         


Q ss_pred             hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075        281 INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG  348 (414)
Q Consensus       281 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g  348 (414)
                      ....++......+..++....+.+.+++.++..++..-|+.+.+.|+..++|+---..+..++.|.++
T Consensus       366 ~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt  433 (510)
T KOG3574|consen  366 RGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT  433 (510)
T ss_pred             echHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence            11123333334555555556666777777788889988999999999999999988889999988644

>KOG0569|consensus

Probab=98.94  E-value=6.6e-09  Score=97.77  Aligned_cols=143  Identities=22%  Similarity=0.320  Sum_probs=111.2

Q ss_pred             hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh---hhhhHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy14075        231 GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL---ARNINHLIVPNAGLGFAIGMVDSSMMPELG  307 (414)
Q Consensus       231 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  307 (414)
                      +...+++.+++++|+++.++++||+|||..+.++.++..++.+++.+   .++...+.+.-++.|+..+......+   .
T Consensus        63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~p---m  139 (485)
T KOG0569|consen   63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVP---M  139 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHH---H
Confidence            45677888999999999999999999999998888888777666655   35667778888999988887755443   3


Q ss_pred             hhhhcccccchhhHHhHHHHHHHHHHhHHHHHH-HHHHh-hhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        308 YLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS-GTLVN-TIGFEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       308 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~-g~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                      +..|..|.+.||....+......+|..++..++ ..+.. ...|.+.+.+..+.+++..+...++++.+|.
T Consensus       140 yl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~  210 (485)
T KOG0569|consen  140 YLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKY  210 (485)
T ss_pred             HHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcch
Confidence            578999999999999988888888888875443 22332 2338888888888888888888888776654

>PRK09669 putative symporter YagG; Provisional

Probab=98.92  E-value=2.5e-08  Score=95.65  Aligned_cols=165  Identities=16%  Similarity=0.134  Sum_probs=108.7

Q ss_pred             HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhh-HHHHHHHHHHHHHHHHHhh
Q psy14075        202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGR-YLAALLGLLIIGICLMMIP  276 (414)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~-~~~~~~~~~~~~i~~~~~~  276 (414)
                      +..+........+++.|+.+.+|+++.++|.++.+.-+...+..++.|+++||    +|| |+.++.+.+..+++..++.
T Consensus        19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f   98 (444)
T PRK09669         19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF   98 (444)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence            33444455667788999999999999999999999999999999999999998    555 4556667676666655444


Q ss_pred             hhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh---
Q psy14075        277 LARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT---  346 (414)
Q Consensus       277 ~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---  346 (414)
                      ..++      .....+..++.+.++........+.   ..|.. ++++|++..+.......+|..+++.+...+...   
T Consensus        99 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al---~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~  175 (444)
T PRK09669         99 YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAM---PGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK  175 (444)
T ss_pred             hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHh---HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            4332      1222333344455555544444433   33433 346788888888888888888887766555443   


Q ss_pred             ----hchHHHHHHHHHHHHHHHHHHHH
Q psy14075        347 ----IGFEWMLFIIAILDFMYAPLLYL  369 (414)
Q Consensus       347 ----~g~~~~~~~~~~~~~~~~~~~~~  369 (414)
                          .||...+.+.+++..+...+.++
T Consensus       176 ~~~~~g~~~~~~i~~ii~~v~~~~~~~  202 (444)
T PRK09669        176 GDEQKGYFYAMMVMGLLGVVLFFCCFF  202 (444)
T ss_pred             CchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence                34555666666555554444433

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.90  E-value=5.1e-08  Score=94.24  Aligned_cols=167  Identities=15%  Similarity=0.135  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhh-HHHHHHHHHHHHHHHH
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGR-YLAALLGLLIIGICLM  273 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~-~~~~~~~~~~~~i~~~  273 (414)
                      +..+..+.....+..+++.|+.+.+|+++.++|.++.+.-+...+..++.|.++||    +|| |+.++.+.+..++++.
T Consensus        13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~   92 (473)
T PRK10429         13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF   92 (473)
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence            44444566667778889999999999999999999999999999999999999995    577 5666678777777765


Q ss_pred             Hhhhhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075        274 MIPLARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT  346 (414)
Q Consensus       274 ~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~  346 (414)
                      ++...++      .....+..+++.+++.+....+.++.   .|.. ++++|.+..+......++|+.+.+.+...+.+.
T Consensus        93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~---~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~  169 (473)
T PRK10429         93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLV---PTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNY  169 (473)
T ss_pred             HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhh---HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5544321      11222333445566666655555544   3433 366788888887777777766666655544332


Q ss_pred             h-------chHHHHHHHHHHHHHHHHHHH
Q psy14075        347 I-------GFEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       347 ~-------g~~~~~~~~~~~~~~~~~~~~  368 (414)
                      .       ||.....+.+++.++...+.+
T Consensus       170 ~g~~~~~~g~~~~~~i~~~~~~~~~~~~~  198 (473)
T PRK10429        170 VGGGDRGFGFQMFTLVLIAFFIVSTIITL  198 (473)
T ss_pred             hCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            2       344444444444444433333

>PRK09848 glucuronide transporter; Provisional

Probab=98.87  E-value=2.7e-08  Score=95.63  Aligned_cols=126  Identities=16%  Similarity=0.161  Sum_probs=102.4

Q ss_pred             hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhh
Q psy14075         24 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCSS  101 (414)
Q Consensus        24 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~  101 (414)
                      .+|.++...++......++..++.++++++.||+|+|+++.++.++..++.++..+.+  +++.+++..++.|+|.+...
T Consensus       258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~  337 (448)
T PRK09848        258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM  337 (448)
T ss_pred             ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence            4565554444545555677888999999999999999999999999888887777643  67777777888999999999


Q ss_pred             hhHHHHHhhcCCCc------chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC
Q psy14075        102 VSGMGMLAERYPDD------RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK  149 (414)
Q Consensus       102 ~~~~~~i~~~~~~~------~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw  149 (414)
                      +...++.+|..|.+      +++|...+..+....+|..+|+.+.+.+.+..|+
T Consensus       338 ~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~  391 (448)
T PRK09848        338 TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY  391 (448)
T ss_pred             HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999999987631      2358999999999999999999999988877665

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.86  E-value=9.6e-08  Score=84.86  Aligned_cols=155  Identities=15%  Similarity=0.117  Sum_probs=130.4

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      +|.+..|.|+|..+.|++.+...+.+...++....+++| -++|+..+...+.+.++...+.+.+.-..+.- -++.|+|
T Consensus       231 LP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G  309 (395)
T COG2807         231 LPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLG  309 (395)
T ss_pred             HHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCc
Confidence            488999999999999999999999999999999999996 45677788888888888888888765444443 4899999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQP  173 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~  173 (414)
                      .|..++.....+.+..++.++-++..++.|....+=..+||.+.|++-|.. +|+.+++......++..+..+..-++
T Consensus       310 ~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~  387 (395)
T COG2807         310 QGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRN  387 (395)
T ss_pred             cchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchh
Confidence            999999999999999876566677778888877777889999999999875 59999999988888877777766544

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.85  E-value=6.4e-07  Score=80.21  Aligned_cols=149  Identities=16%  Similarity=0.135  Sum_probs=108.7

Q ss_pred             HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhh
Q psy14075        221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDS  300 (414)
Q Consensus       221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  300 (414)
                      +.+|++..+++.++........+...+.|.++||+|||+..+...++.+++++.- ..++.+.+++.-++.|++....++
T Consensus        62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaTSLLfS  140 (354)
T PF05631_consen   62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIATSLLFS  140 (354)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999999988888888887643 346778888889999999998888


Q ss_pred             hhhhhhhhhhhc----ccccchhhHHhHHH-HHHHHHHhHHHHHHHHHHhhhch--HHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        301 SMMPELGYLVDI----RHTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTIGF--EWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       301 ~~~~~~~~~~~~----~~~~~~g~~~g~~~-~~~~~g~~ig~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      .+-+..  +.|.    +|++..+..++... ..+.+-.+....++-++.|..|.  ..+|.....+.+++.++....++
T Consensus       141 ~FEsW~--V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~  217 (354)
T PF05631_consen  141 AFESWM--VHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP  217 (354)
T ss_pred             HHHHHH--HHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence            777664  3333    34444555565554 23344455555566666666654  67788777777766665544333

>KOG4686|consensus

Probab=98.84  E-value=5.1e-08  Score=83.35  Aligned_cols=146  Identities=18%  Similarity=0.229  Sum_probs=110.3

Q ss_pred             hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHhhhhh
Q psy14075         20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST-LIFAFGRTYGVLFLARSLQGIGSS   98 (414)
Q Consensus        20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~   98 (414)
                      ..++.+|+|+...+.+.+....-.++..|+.|.++||+|++...+.+..+..+.. ....|  +++.=+.+..+.|+...
T Consensus       290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsys  367 (459)
T KOG4686|consen  290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYS  367 (459)
T ss_pred             HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHH
Confidence            4578999999999999999999999999999999999999988777665544432 22222  33333456677788877


Q ss_pred             hhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC---ChhHHH-HHHHHHHHHHHHHH
Q psy14075         99 CSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG---KTAPFL-ILSALALGDGLLQL  168 (414)
Q Consensus        99 ~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g---w~~~f~-~~~~~~~~~~~~~~  168 (414)
                      ..-......++...| +++.|++.|..+...++|..+.|++++.+.++-|   |--.|. ..+.+++....+.+
T Consensus       368 llAcslWP~va~~vp-E~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~  440 (459)
T KOG4686|consen  368 LLACSLWPCVASLVP-EEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF  440 (459)
T ss_pred             HHHHHHhhhhhhhCC-HHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence            766666677888889 5999999999999999999999999999998644   444444 44444444333333

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.83  E-value=2.3e-08  Score=95.41  Aligned_cols=169  Identities=17%  Similarity=0.256  Sum_probs=117.1

Q ss_pred             HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh----hhhhHH-HHHHHHHHHHHHHHHhh
Q psy14075        202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH----RMGRYL-AALLGLLIIGICLMMIP  276 (414)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d----~~~~~~-~~~~~~~~~~i~~~~~~  276 (414)
                      +...+.......+++.|+.+..|.++...|.+.....+...+..++.|.++|    |+|||| .++.+.+..++++.++.
T Consensus        11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf   90 (428)
T PF13347_consen   11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF   90 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh
Confidence            3344555556678888999999999999999999999999999999999999    677654 55568888888777776


Q ss_pred             hh-h-h------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc-ccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075        277 LA-R-N------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH-TAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI  347 (414)
Q Consensus       277 ~~-~-~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  347 (414)
                      .. + +      .....+..+++.+++........++   ..|..+ +++|.+..+..+....+|..+...+.+.+.+..
T Consensus        91 ~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al---~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~  167 (428)
T PF13347_consen   91 SPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNAL---IPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWF  167 (428)
T ss_pred             ccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhc---CccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            54 3 1      1122344444566666665444444   334433 467899999988888888877777777776543


Q ss_pred             -------chHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        348 -------GFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       348 -------g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                             +|+....+.+++..+...+..+..|+
T Consensus       168 g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke  200 (428)
T PF13347_consen  168 GGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE  200 (428)
T ss_pred             ccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence                   46666666666666655555554444

>PRK11462 putative transporter; Provisional

Probab=98.82  E-value=2e-07  Score=89.70  Aligned_cols=169  Identities=18%  Similarity=0.162  Sum_probs=115.9

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhh-HHHHHHHHHHHHHHHH
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGR-YLAALLGLLIIGICLM  273 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~-~~~~~~~~~~~~i~~~  273 (414)
                      +.-+..+..+.....++..|+.+..|+++..+|.++.+.-+.-.+.-++.|.++||    +|| |+.++++.+..++++.
T Consensus        16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~   95 (460)
T PRK11462         16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV   95 (460)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence            33444455566677889999999999999999999999999999999999999997    455 4556667777777766


Q ss_pred             Hhhhhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075        274 MIPLARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI  347 (414)
Q Consensus       274 ~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  347 (414)
                      ++...++      .....+..+++.+++.+....+.++....+++  +++|++..+.......+|..+++.+...+.+..
T Consensus        96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~  173 (460)
T PRK11462         96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND--PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI  173 (460)
T ss_pred             HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6554432      12233344455667766665555554444432  677899999999888888888888776665544


Q ss_pred             -------chHHHHHHHHHHHHHHHHHHHH
Q psy14075        348 -------GFEWMLFIIAILDFMYAPLLYL  369 (414)
Q Consensus       348 -------g~~~~~~~~~~~~~~~~~~~~~  369 (414)
                             ||.....+.+++.+++..+++.
T Consensus       174 g~~~~~~g~~~~~~i~~ii~~i~~~i~~~  202 (460)
T PRK11462        174 GGDNKPLGFQGGIAVLSVVAFMMLAFCFF  202 (460)
T ss_pred             CCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence                   3455555555544444444333

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.81  E-value=2.1e-07  Score=80.46  Aligned_cols=158  Identities=18%  Similarity=0.124  Sum_probs=105.7

Q ss_pred             HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-------hh
Q psy14075        209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-------NI  281 (414)
Q Consensus       209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~  281 (414)
                      +.+..|-|. +++.+|+|..|...+.....++..+| ++.|.+.||+|++.++.++.+...+++..+...-       +.
T Consensus        19 Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~   96 (250)
T PF06813_consen   19 YTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPV   96 (250)
T ss_pred             cchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccch
Confidence            344444554 67789999999999988888888775 8889999999999999999999999988877632       23


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHH-
Q psy14075        282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILD-  360 (414)
Q Consensus       282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~-  360 (414)
                      |.+.+..++.+.+....   ....+....+++|+ .||++.|+.-....+++++-..+...+.+. +...-+.+.+... 
T Consensus        97 ~~~~~~~~l~~~s~~~~---~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~  171 (250)
T PF06813_consen   97 WLMCLFLFLGGNSSCWF---NTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPA  171 (250)
T ss_pred             HHHHHHHHHHcccHHHh---hhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence            33333334443433332   12222334577874 689999999999999888888777776654 3233333333333 


Q ss_pred             HHHHHHHHHhcCC
Q psy14075        361 FMYAPLLYLLRNP  373 (414)
Q Consensus       361 ~~~~~~~~~~~~~  373 (414)
                      +++++...+.+..
T Consensus       172 ~v~l~~~~~vr~~  184 (250)
T PF06813_consen  172 VVCLVAMFFVRPV  184 (250)
T ss_pred             HHHHHHhhheecc
Confidence            3333444444444

>KOG3762|consensus

Probab=98.78  E-value=2.6e-08  Score=92.53  Aligned_cols=147  Identities=20%  Similarity=0.177  Sum_probs=132.6

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS  101 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~  101 (414)
                      .||.+..+...|........+-.+.-++.+++.+|+|+-+++..++...++=.+..++.+|.|+.+-..+++|+..+..+
T Consensus       398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW  477 (618)
T KOG3762|consen  398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW  477 (618)
T ss_pred             HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence            46777777788877888888888899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhhcCCCcchhhHHHHHHHHH-HhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075        102 VSGMGMLAERYPDDRERGNAMGIALGG-LALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL  169 (414)
Q Consensus       102 ~~~~~~i~~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~  169 (414)
                      .+..+|+++..|| +-|..+.++++.. .++|--+|.++||.+.+.++-|..|...++.+++..+....
T Consensus       478 aa~~sY~s~vaPp-~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~  545 (618)
T KOG3762|consen  478 AAIISYASHVAPP-GLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS  545 (618)
T ss_pred             HHHHHHHHhhCCC-cchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997 9999999998664 68999999999999999999999999999988776665443

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.78  E-value=5.9e-11  Score=114.14  Aligned_cols=142  Identities=21%  Similarity=0.290  Sum_probs=113.6

Q ss_pred             chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh---hhHHHHHHHHHHHHHHHhhhhhhhhh
Q psy14075        229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR---NINHLIVPNAGLGFAIGMVDSSMMPE  305 (414)
Q Consensus       229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~  305 (414)
                      +.++..+...++..+|.++.|.++||+|||+.+..+..+..++.++..+++   +.+.+.+.-++.|++.|...+...  
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~--  124 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP--  124 (451)
T ss_pred             HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence            456788889999999999999999999999999999999999999999988   888888888999999888755444  


Q ss_pred             hhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh---hchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075        306 LGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT---IGFEWMLFIIAILDFMYAPLLYLLRNP  373 (414)
Q Consensus       306 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~  373 (414)
                       .+..|..|++.|+...++.+....+|..++..+.-.+.+.   .+|+..+.+..+..++..+...+.++.
T Consensus       125 -~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES  194 (451)
T PF00083_consen  125 -IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES  194 (451)
T ss_pred             -cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             4577888999999999999888888887777665433332   348888877777776655555555543

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG0253|consensus

Probab=98.71  E-value=3.8e-08  Score=87.25  Aligned_cols=134  Identities=13%  Similarity=0.166  Sum_probs=103.4

Q ss_pred             HHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhh
Q psy14075         40 AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERG  119 (414)
Q Consensus        40 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~  119 (414)
                      ++.-.-+.++.+.+.||+|||+.+..+.+++++..++...+.+-....+.-+..-++..+.+.+.+.|..|.+| .+-|+
T Consensus       391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyP-TavRa  469 (528)
T KOG0253|consen  391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYP-TAVRA  469 (528)
T ss_pred             HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccc-hhhhh
Confidence            34456678899999999999999999999999999988777654443333333334444555667889999999 59999


Q ss_pred             HHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075        120 NAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus       120 ~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      ...|.-....-+|.++.|.++  +.....-..+..+.+...++..+...+++-|++.
T Consensus       470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG  524 (528)
T KOG0253|consen  470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKG  524 (528)
T ss_pred             cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence            999999999999999999998  3322345567778888888888888777665543

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.69  E-value=6e-07  Score=88.91  Aligned_cols=165  Identities=10%  Similarity=0.092  Sum_probs=122.6

Q ss_pred             HHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhh------
Q psy14075        208 IAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLGLLIIGICLMMIPLARN------  280 (414)
Q Consensus       208 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~i~~~~~~~~~~------  280 (414)
                      ++++...+..|+.+.+|++...+..++..+....-+..+++|+++|+ +|+++.+.++.++..++..++.+...      
T Consensus         3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~   82 (654)
T TIGR00926         3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP   82 (654)
T ss_pred             eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence            45566677888888889998888887777777777788899999996 79999999999998888877765321      


Q ss_pred             --hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-------chHH
Q psy14075        281 --INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-------GFEW  351 (414)
Q Consensus       281 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-------g~~~  351 (414)
                        ....++.+.+..+|.|..-+...+.....-+..+++.+-+.+.+.....++|+.+++.+.+++.+..       +|..
T Consensus        83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~  162 (654)
T TIGR00926        83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPL  162 (654)
T ss_pred             hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHH
Confidence              1224456666777777776666655443332222334678888899999999999999999988543       5888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC
Q psy14075        352 MLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      +|.+.+++.+++.++....++
T Consensus       163 aF~i~~i~m~ia~lvf~~g~k  183 (654)
T TIGR00926       163 AFGVPAILMILALIVFMAGSK  183 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc
Confidence            999988888888777665444

>KOG3810|consensus

Probab=98.62  E-value=1.4e-06  Score=76.79  Aligned_cols=341  Identities=12%  Similarity=0.097  Sum_probs=216.5

Q ss_pred             hhcCCcchHH-HHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075         24 YLMGETKAVG-VMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV  102 (414)
Q Consensus        24 ~~g~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~  102 (414)
                      +.+++..|+. -+.-.-.-.+.+.-.+.=.+.|-.--|++++.-.+.......+.-+.++.+.+=+.-+..|...+.. .
T Consensus        35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-I  113 (433)
T KOG3810|consen   35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-I  113 (433)
T ss_pred             CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-H
Confidence            4455554432 1233334456666777788999999999999888888888888889999999999999999977655 4


Q ss_pred             hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC--hhHHHHHHHHHHHHHHHHHHhccCCCC----
Q psy14075        103 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK--TAPFLILSALALGDGLLQLLLLQPGVV----  176 (414)
Q Consensus       103 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~----  176 (414)
                      +.++++-...++ +++.++.+......-.|-.+|..++..+.+...+  ...-.+.-....+..+..++.+++++.    
T Consensus       114 AYysYIYs~Vd~-~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~  192 (433)
T KOG3810|consen  114 AYYSYIYSKVDP-EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH  192 (433)
T ss_pred             hhhheeeeecCH-HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence            567888888885 9999999999999999999999999888865333  333333333333444444444433311    


Q ss_pred             --CCCC---------CC---------------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCC-Cccc
Q psy14075        177 --KQEV---------EP---------------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGA-DKWQ  229 (414)
Q Consensus       177 --~~~~---------~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~  229 (414)
                        +++.         ++               .++.+..+||++..-.+-..+...++.....+....-++.-.- ...-
T Consensus       193 ~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vy  272 (433)
T KOG3810|consen  193 RLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVY  272 (433)
T ss_pred             cccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhh
Confidence              0000         00               0223455778777666777777777777776666655553111 1112


Q ss_pred             hhhHhHHHHHHHHhhhhhhhhhhhhhhhH--HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy14075        230 QGVSFLPASISYLIGTNLFGPLGHRMGRY--LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELG  307 (414)
Q Consensus       230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  307 (414)
                      .|..=+...+.++++.+..|.+.-++.|.  .++.++.+..+-.++.+...++.|.....-+++...+....+....   
T Consensus       273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~---  349 (433)
T KOG3810|consen  273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF---  349 (433)
T ss_pred             cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH---
Confidence            34445555667777788888876555543  3445566666666677777788888888777777777665433322   


Q ss_pred             hhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-----------hHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        308 YLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-----------FEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       308 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      .+++....+..|..+|+.+++.-+-..+-..   .+.|..|           |..-|.+.+.+.++...+.....+
T Consensus       350 ~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~---iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~  422 (433)
T KOG3810|consen  350 QIARNLSSELFGLVFGINTFVALILQSILTL---IVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCR  422 (433)
T ss_pred             HHHHhhhhhhheeeeehHHHHHHHHHHhheE---EEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhh
Confidence            3445556677789999877644443333332   2344222           334566777777776655444433

>KOG2325|consensus

Probab=98.58  E-value=1.6e-06  Score=81.33  Aligned_cols=179  Identities=16%  Similarity=0.201  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHH-HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh-HHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMD-TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR-YLAALLGLLIIGIC  271 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~i~  271 (414)
                      .++..+..++....+..+..-.-.|+++ ..+.+....|+..+...++.+++++..|+...|.+. |+.++.+.+++.++
T Consensus        36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g  115 (488)
T KOG2325|consen   36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIG  115 (488)
T ss_pred             HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHH
Confidence            4444555555555555554444455655 246667778999999999999999999999999885 77788899999888


Q ss_pred             HHHhhhh----h-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075        272 LMMIPLA----R-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT  346 (414)
Q Consensus       272 ~~~~~~~----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~  346 (414)
                      .+++...    + ..+.+.++-++.|++.+..    ...=.++++..-.++|.++.+..+....+|..+||.+...+...
T Consensus       116 ~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~----a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L  191 (488)
T KOG2325|consen  116 NLLYLALAYVPNGVKYLMLVARILTGVGVGNF----AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL  191 (488)
T ss_pred             HHHHHHHHhcccchHHHHHHHHHHcCcCcccH----HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence            8777332    2 3445566667777766544    33334566666667788888888877778888888766444321


Q ss_pred             ------------hc-hHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075        347 ------------IG-FEWMLFIIAILDFMYAPLLYLLRNPPTK  376 (414)
Q Consensus       347 ------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (414)
                                  ++ |..+-+++++..++.+++..+..++..+
T Consensus       192 g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~  234 (488)
T KOG2325|consen  192 GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR  234 (488)
T ss_pred             cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence                        11 4556677777777777766655544433

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=98.57  E-value=1.2e-05  Score=74.21  Aligned_cols=164  Identities=15%  Similarity=0.093  Sum_probs=121.0

Q ss_pred             HhhhhchHHHHHHH-hCCCccchhhH-hHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075        209 AMLEPSLPIWMMDT-MGADKWQQGVS-FLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV  286 (414)
Q Consensus       209 ~~~~~~~~~~~~~~-~g~~~~~~g~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  286 (414)
                      --...++..|+.+. .|++..+..-- +-...=..++..+....+.|..+.|++++++.+...+...++.+.++...+-+
T Consensus        20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~   99 (412)
T PF01770_consen   20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQL   99 (412)
T ss_pred             CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHH
Confidence            34667888888876 78887776542 22233345555666778999999999999999998888888888888888888


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh--hchHHHHHHHHHHHHHHH
Q psy14075        287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT--IGFEWMLFIIAILDFMYA  364 (414)
Q Consensus       287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~--~g~~~~~~~~~~~~~~~~  364 (414)
                      ..++.|+....-    ....+++-...|++..-++.+......-+|..++..++-.+...  ..+.....+......++.
T Consensus       100 ~q~~yg~~~a~e----vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~  175 (412)
T PF01770_consen  100 MQFFYGLATAAE----VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL  175 (412)
T ss_pred             HHHHHHHHHHHH----HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            888887776654    33334555666677777888888888888888888887776653  347777777777777888


Q ss_pred             HHHHHhcCCCch
Q psy14075        365 PLLYLLRNPPTK  376 (414)
Q Consensus       365 ~~~~~~~~~~~~  376 (414)
                      ++.+++++.++.
T Consensus       176 ~~~~fLP~~~~S  187 (412)
T PF01770_consen  176 LIALFLPMPKRS  187 (412)
T ss_pred             HHHHHcCCCCcc
Confidence            888888776543

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.56  E-value=3.1e-06  Score=79.24  Aligned_cols=173  Identities=16%  Similarity=0.158  Sum_probs=125.2

Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh----hh-HHHHHHHHHHHHH
Q psy14075        196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM----GR-YLAALLGLLIIGI  270 (414)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~----~~-~~~~~~~~~~~~i  270 (414)
                      ...+.-+..+..+.....|+..|+.++.|.++..+|.++.+.=+.-++.-++.|.++||.    || |+.++.+.+..++
T Consensus        16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i   95 (467)
T COG2211          16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI   95 (467)
T ss_pred             hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence            344455556677777888999999999999999999999999999999999999999974    44 5566677777777


Q ss_pred             HHHHhhhhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075        271 CLMMIPLARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV  344 (414)
Q Consensus       271 ~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~  344 (414)
                      ...+....++      .....+.-+++++++......+.++...+.+  ++++|.+..+.-.....+|..+...+.+.+.
T Consensus        96 ~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~--d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv  173 (467)
T COG2211          96 VAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ--DPQERASLTSWRMVFASLGGLLVAVLFPPLV  173 (467)
T ss_pred             HHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666655542      2233455667788888876666666554444  3667899999999999999888888887777


Q ss_pred             hhh-------chHHHHHHHHHHHHHHHHHHHHh
Q psy14075        345 NTI-------GFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       345 ~~~-------g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      ...       ||+....+.+++..+....+++-
T Consensus       174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~  206 (467)
T COG2211         174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFFN  206 (467)
T ss_pred             HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            543       45555555555555555554443

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=98.52  E-value=1.3e-07  Score=66.19  Aligned_cols=72  Identities=13%  Similarity=0.017  Sum_probs=66.2

Q ss_pred             ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy14075         16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLF   87 (414)
Q Consensus        16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~   87 (414)
                      +.+|.+.+|.++|.++.|++.+.+++||.++++...++.++..+++.+..+.+...+..+.+++.++++.+.
T Consensus        13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~   84 (85)
T PF06779_consen   13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS   84 (85)
T ss_pred             hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence            356677799999999999999999999999999999999999899999999999999999999999887653

Note that many members are hypothetical proteins.

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.41  E-value=4.7e-06  Score=79.27  Aligned_cols=157  Identities=18%  Similarity=0.206  Sum_probs=114.2

Q ss_pred             hHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh-----hHHHHHHHHHHHHHHHHHhhhhh----hhHHHH
Q psy14075        215 LPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG-----RYLAALLGLLIIGICLMMIPLAR----NINHLI  285 (414)
Q Consensus       215 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~  285 (414)
                      ...|+++.+|+++.+...+.....+...+ .++.|.++|-+.     ||..++++.++..++.+.+...+    +.....
T Consensus        12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~   90 (433)
T PF03092_consen   12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV   90 (433)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence            44567888999999988877776665554 678899999863     66666777777755555444422    344444


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075        286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP  365 (414)
Q Consensus       286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~  365 (414)
                      +..++..++........-..........|.+ +|...+.......+|+.++..+.|.+.+..+++..|.+.+.+..+..+
T Consensus        91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~  169 (433)
T PF03092_consen   91 VLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI  169 (433)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence            5556666666666555555555555556655 788899999999999999999999999999999999888888777766


Q ss_pred             HHHHhcCC
Q psy14075        366 LLYLLRNP  373 (414)
Q Consensus       366 ~~~~~~~~  373 (414)
                      ..+...++
T Consensus       170 ~~~~~~~e  177 (433)
T PF03092_consen  170 VALFLLEE  177 (433)
T ss_pred             HHHHhhhh
Confidence            66666554

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=98.39  E-value=0.00024  Score=66.43  Aligned_cols=326  Identities=10%  Similarity=-0.014  Sum_probs=177.6

Q ss_pred             cchhhhhh--hcCCcchHHHHHHHHHHHHHHhhhHHHHhhc-----ccCCchhHHH-HHHHHHHHHHHHHhhh-------
Q psy14075         17 ARENRHKY--LMGETKAVGVMFGSKAFVQLLANPLVGILTH-----RVGYSLPMFT-GFVIMFLSTLIFAFGR-------   81 (414)
Q Consensus        17 ~~~~~~~~--~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~~~~~~~~~~~~~~~~-------   81 (414)
                      ..|.+.++  -+.|.+|.|...- ....+.+ -++|.++.|     |+||||..++ -..+.++..+..+..-       
T Consensus        22 siPflL~~~~~~~sy~q~~~fSl-a~~PfSl-KlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~   99 (544)
T PF13000_consen   22 SIPFLLQSMAKKVSYSQQAIFSL-ASYPFSL-KLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFD   99 (544)
T ss_pred             cchhhhccccCCCChhHheeeee-eechhHH-HHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhccc
Confidence            35667677  6888888876532 2222222 445555555     7999998554 3333333333332211       


Q ss_pred             -----------------hHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh
Q psy14075         82 -----------------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY  144 (414)
Q Consensus        82 -----------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~  144 (414)
                                       +...+...-++.=+-.+.-..+.-.+.-.... +++++.+......+.+.|..++..+--.+-
T Consensus       100 ~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls-~~n~~~ASTcqtvG~~~Gyfls~tvFlaln  178 (544)
T PF13000_consen  100 GVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLS-PENVGYASTCQTVGQTAGYFLSFTVFLALN  178 (544)
T ss_pred             ccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcC-hhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence                             11122233333334445555555566666667 488888888888887877777665443332


Q ss_pred             h-----hc--------C---ChhHHHHHHHHHHHHHHHHHHhccCCCCCC---------------C-------CCC----
Q psy14075        145 Q-----FV--------G---KTAPFLILSALALGDGLLQLLLLQPGVVKQ---------------E-------VEP----  182 (414)
Q Consensus       145 ~-----~~--------g---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~----  182 (414)
                      +     .+        |   -..-..+.+...++..+...++.+|++..+               +       +++    
T Consensus       179 s~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (544)
T PF13000_consen  179 SPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVIST  258 (544)
T ss_pred             CHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecccccccch
Confidence            1     11        1   112234555555666666666655432100               0       000    


Q ss_pred             ---c-------hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075        183 ---P-------TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG  252 (414)
Q Consensus       183 ---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~  252 (414)
                         .       ...+++|-|.+..+.+.....-.++.+-......-+.| .|++.++.+.+..+..-.+++.....++++
T Consensus       259 ~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li~~P~qii~~~~~~Kws  337 (544)
T PF13000_consen  259 EEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLIDFPFQIILPYYIGKWS  337 (544)
T ss_pred             hhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHHhhhHHHHHHHHhhhhh
Confidence               0       12245667777777777777778777777777777777 599998887776655555555555555554


Q ss_pred             hhhhh---------------------------HHHHHHHHHHHHHH----HHHhhhhh-----hhHHHHHHHHHHHHHHH
Q psy14075        253 HRMGR---------------------------YLAALLGLLIIGIC----LMMIPLAR-----NINHLIVPNAGLGFAIG  296 (414)
Q Consensus       253 d~~~~---------------------------~~~~~~~~~~~~i~----~~~~~~~~-----~~~~~~~~~~~~g~~~~  296 (414)
                      .--.+                           -+..+.++..-.+.    .......+     +.+.+.+..+...+...
T Consensus       338 ~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf  417 (544)
T PF13000_consen  338 AGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSF  417 (544)
T ss_pred             cCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHH
Confidence            31110                           01122222211111    11111111     11222222222333333


Q ss_pred             hhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075        297 MVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT  346 (414)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~  346 (414)
                      +....+.+..++-+...+|..=|+.+.+.|+..++|+.--..+.=++.|.
T Consensus       418 ~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  418 MSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             HHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence            33334555555666777788889999999999999998877777777774

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG0252|consensus

Probab=98.39  E-value=2.6e-06  Score=78.16  Aligned_cols=113  Identities=19%  Similarity=0.167  Sum_probs=83.9

Q ss_pred             CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--h-----hHHHHHHHHHHHHHHHh
Q psy14075        225 ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--N-----INHLIVPNAGLGFAIGM  297 (414)
Q Consensus       225 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~-----~~~~~~~~~~~g~~~~~  297 (414)
                      +++...+.......++.++|+++.|++.||+|||++....++++.++.++.....  +     .+.+...-+++|+|.|.
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG  160 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG  160 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence            4556677888889999999999999999999999999999998888877555431  1     23345566788999998


Q ss_pred             hhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH
Q psy14075        298 VDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS  340 (414)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~  340 (414)
                      -+|...+.   ..|....+.||.-.+..-..+..|...|..+.
T Consensus       161 DYPlSAtI---~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt  200 (538)
T KOG0252|consen  161 DYPLSATI---MSESANKKTRGAFIAAVFAMQGFGILAGGIVA  200 (538)
T ss_pred             CCcchHHH---hhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence            87655444   55766777888887776666666655555444

>KOG2816|consensus

Probab=98.37  E-value=2e-05  Score=74.84  Aligned_cols=134  Identities=24%  Similarity=0.345  Sum_probs=100.6

Q ss_pred             HHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc
Q psy14075        238 SISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV  317 (414)
Q Consensus       238 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  317 (414)
                      ++..++...+.|.++||+|||..+........+..+.+.+.. +|. .+   +.++.-+ .........++.++....+.
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~-~~---~~~l~g~-~~~~~s~~~a~vadis~~~~  145 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWF-FL---LLGLSGG-FSAIFSVGFAYVADISSEEE  145 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHH-hh---hcccccc-hhhhhhhhhhheeeccchhH
Confidence            677788889999999999999999888887777766665544 222 22   2222211 11223444556778888889


Q ss_pred             hhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075        318 YGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       318 ~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (414)
                      |....|+.+.....+..++|.+.+.+.+..|+...|.+..+..++..+......++...+
T Consensus       146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~  205 (463)
T KOG2816|consen  146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE  205 (463)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence            999999999999999999999999999999999999999888888877766655544433

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=98.34  E-value=1e-05  Score=64.55  Aligned_cols=107  Identities=15%  Similarity=0.119  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCC
Q psy14075         35 MFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD  114 (414)
Q Consensus        35 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~  114 (414)
                      -.++......+++++.+.+.+++|.|+.++++.+.+.+-.+.. +.++.+.++.+-++.|++.+..+++...++.+..+ 
T Consensus        42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~-  119 (156)
T PF05978_consen   42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST-  119 (156)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC-
Confidence            3556666678888889999999999999999999998665554 56778899999999999999999999999999988 


Q ss_pred             cchhhHHHHHHHHHHhhhhhhchhhhhHh
Q psy14075        115 DRERGNAMGIALGGLALGVLIGPPFGGIM  143 (414)
Q Consensus       115 ~~~r~~~~~~~~~~~~~g~~ig~~l~~~l  143 (414)
                      +++|++-.+++......+.++|.++.-.+
T Consensus       120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            59999999999999888888887765544

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=98.32  E-value=0.0018  Score=62.01  Aligned_cols=235  Identities=16%  Similarity=0.061  Sum_probs=145.7

Q ss_pred             CcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh---------h----------------
Q psy14075         28 ETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---------R----------------   81 (414)
Q Consensus        28 s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~----------------   81 (414)
                      .+..+..+=....+ ...+......+++||++|.+++-+....+.....++++.         +                
T Consensus        56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~  135 (491)
T PF03219_consen   56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK  135 (491)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence            34445555444444 345567789999999999999888777777776666652         1                


Q ss_pred             ------hHHHHHHHHHHHhhhhhhhhh-hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh---------
Q psy14075         82 ------TYGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ---------  145 (414)
Q Consensus        82 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~---------  145 (414)
                            +.|...+..++.-+-...... .-..+.+|.++ .+|-.|..+++..+.++|.+++..+...+.+         
T Consensus       136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt-~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~  214 (491)
T PF03219_consen  136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT-VEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAG  214 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence                  123344444444443333333 45678899998 5999999999999999999999998888877         


Q ss_pred             hcCChhHHH----HHHHHHHHHHHHHHHhc----cCCC-------CCCCCCC----chhhhhccChHHHHHHHHHHHHHH
Q psy14075        146 FVGKTAPFL----ILSALALGDGLLQLLLL----QPGV-------VKQEVEP----PTLKSLVMDPYILIAAGAITFANT  206 (414)
Q Consensus       146 ~~gw~~~f~----~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  206 (414)
                      .-.|...+.    +..+.+++...+...+.    +++.       +++++++    ++.+.++|+|.+..+++...+++.
T Consensus       215 ~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi  294 (491)
T PF03219_consen  215 VDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGI  294 (491)
T ss_pred             cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            123553332    12222222222222221    1111       1111111    245667889998888888888888


Q ss_pred             HHHhhhhchHHHHHHHhCCCccc----hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHH
Q psy14075        207 GIAMLEPSLPIWMMDTMGADKWQ----QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLG  264 (414)
Q Consensus       207 ~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~  264 (414)
                      ..+.+....-..+++.+. ++.+    .|-.....++..++..++.+.+.+|+|-+....+.
T Consensus       295 ~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Alit  355 (491)
T PF03219_consen  295 SINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALIT  355 (491)
T ss_pred             HHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence            777777766666666543 3333    23445556666666677788888998876655553

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.22  E-value=7.7e-05  Score=68.23  Aligned_cols=148  Identities=18%  Similarity=0.117  Sum_probs=123.1

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc-ccCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHhhhh
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH-RVGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSLQGIGS   97 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~   97 (414)
                      .+-||+|..|...+++....+..++-...|++.. |.++|+.-.+++...+++..+..   ...+.+.+...-++.|++.
T Consensus       236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~  315 (403)
T PF03209_consen  236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN  315 (403)
T ss_pred             hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence            4668999999999999999999999999999888 67888888888888887776644   4567889999999999999


Q ss_pred             hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc----------CChhHHHHHHHHHHHHHHHH
Q psy14075         98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV----------GKTAPFLILSALALGDGLLQ  167 (414)
Q Consensus        98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~----------gw~~~f~~~~~~~~~~~~~~  167 (414)
                      |.......+..-|..++ ++.|..+|.+.....++..++..+++.+.|..          ++..+|.+.++..+++.++.
T Consensus       316 G~f~vgals~mM~lt~~-~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll  394 (403)
T PF03209_consen  316 GLFTVGALSLMMDLTSA-GRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL  394 (403)
T ss_pred             hHHHHHHHHHHHhCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999984 89999999999999999999999999887642          35566777776666655554


Q ss_pred             HHh
Q psy14075        168 LLL  170 (414)
Q Consensus       168 ~~~  170 (414)
                      ...
T Consensus       395 ~~l  397 (403)
T PF03209_consen  395 GRL  397 (403)
T ss_pred             HHh
Confidence            443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.20  E-value=6.6e-06  Score=57.15  Aligned_cols=70  Identities=23%  Similarity=0.371  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHH
Q psy14075        197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLI  267 (414)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~  267 (414)
                      +-...++...+...+..++|.|+++ .|+++.+.|.+.++..+..+++.++.|.++||.++++........
T Consensus         5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~   74 (77)
T PF12832_consen    5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF   74 (77)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence            3455677778888899999999997 799999999999999999999999999999999988776655443

>KOG1237|consensus

Probab=98.14  E-value=0.0007  Score=66.25  Aligned_cols=150  Identities=16%  Similarity=0.075  Sum_probs=116.0

Q ss_pred             hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhh---------------
Q psy14075         19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRT---------------   82 (414)
Q Consensus        19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~---------------   82 (414)
                      ..+.++++.+...+.-..+.+.-......+.++.++|- +||-+++.++.++..++..+..++..               
T Consensus        62 ~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~  141 (571)
T KOG1237|consen   62 TYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGG  141 (571)
T ss_pred             HHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCC
Confidence            34456777777777777777777778888999999997 67889999999988888655544221               


Q ss_pred             ----------HHHHHHHHHHHhhhhhhhhhhHHHHHhhcCC---Ccchh--hHHHHHHHHHHhhhhhhchhhhhHhhhhc
Q psy14075         83 ----------YGVLFLARSLQGIGSSCSSVSGMGMLAERYP---DDRER--GNAMGIALGGLALGVLIGPPFGGIMYQFV  147 (414)
Q Consensus        83 ----------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~~r--~~~~~~~~~~~~~g~~ig~~l~~~l~~~~  147 (414)
                                ...++.+.-+..+|.|..-|...+.-+|.++   +++++  ..-+.++....+.|..++..+..+.-+..
T Consensus       142 ~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~  221 (571)
T KOG1237|consen  142 NVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV  221 (571)
T ss_pred             CcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc
Confidence                      1255666677888999999999999999997   21222  36788889999999999998888888889


Q ss_pred             CChhHHHHHHHHHHHHHHHHH
Q psy14075        148 GKTAPFLILSALALGDGLLQL  168 (414)
Q Consensus       148 gw~~~f~~~~~~~~~~~~~~~  168 (414)
                      +|.+-|.+..+...++.++.+
T Consensus       222 ~w~lgf~i~~~~~~lai~iF~  242 (571)
T KOG1237|consen  222 GWKLGFGIPTVLNALAILIFL  242 (571)
T ss_pred             cceeeccHHHHHHHHHHHHHH
Confidence            999999988887776655543

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.02  E-value=1.3e-05  Score=55.72  Aligned_cols=54  Identities=22%  Similarity=0.332  Sum_probs=47.5

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM   70 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~   70 (414)
                      -.|.+.++.|.|+.|+|.+.++..+...++.+++|.++||+++++..+.....+
T Consensus        22 fl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~   75 (77)
T PF12832_consen   22 FLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM   75 (77)
T ss_pred             hhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence            346667889999999999999999999999999999999999998877765543

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=98.00  E-value=0.015  Score=54.70  Aligned_cols=249  Identities=12%  Similarity=0.020  Sum_probs=150.7

Q ss_pred             hhhhhcC---CcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh---------hh-----
Q psy14075         21 RHKYLMG---ETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---------RT-----   82 (414)
Q Consensus        21 ~~~~~g~---s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~-----   82 (414)
                      +++.+.+   .+..+.++-+..-+ +..+..++.+++.+++.|.+++-.-...+....+++++.         ++     
T Consensus        49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~  128 (509)
T COG3202          49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR  128 (509)
T ss_pred             hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence            3444443   35566777777777 677888999999999999999988888888888887752         11     


Q ss_pred             ------------------HHHHHHHHHHHhhhhhhhhh-hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHh
Q psy14075         83 ------------------YGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM  143 (414)
Q Consensus        83 ------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l  143 (414)
                                        .|...+..++.-+-.+.... .-.....|.+. .+|-.|..+.++...+++..++..+..++
T Consensus       129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt-~~eakRFy~lf~l~~ni~lllsg~~~~~~  207 (509)
T COG3202         129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT-IEEAKRFYPLFGLGANISLLLSGEVTSWL  207 (509)
T ss_pred             HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence                              13333444444433333322 44567788888 58899999999999999999999888888


Q ss_pred             hhhc-C---------ChhHHHHHHHHHHHHHHHHHHhcc----CCC---C---CCC--CCC----chhhhhccChHHHHH
Q psy14075        144 YQFV-G---------KTAPFLILSALALGDGLLQLLLLQ----PGV---V---KQE--VEP----PTLKSLVMDPYILIA  197 (414)
Q Consensus       144 ~~~~-g---------w~~~f~~~~~~~~~~~~~~~~~~~----~~~---~---~~~--~~~----~~~~~~~~~~~~~~~  197 (414)
                      .++- .         -+..+.+.+..++++..+..+.-+    ++.   +   +++  +.+    ++.+.+.|+|.++.+
T Consensus       208 ~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~i  287 (509)
T COG3202         208 SKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAI  287 (509)
T ss_pred             hhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHH
Confidence            7631 1         233444555544444444443321    111   0   011  111    235567788988888


Q ss_pred             HHHHHHHHHHHHhhhhchHHHHHHHhCCCccc---hhhHhHHHHHH-HHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075        198 AGAITFANTGIAMLEPSLPIWMMDTMGADKWQ---QGVSFLPASIS-YLIGTNLFGPLGHRMGRYLAALLGLLIIGI  270 (414)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~g~~~~~~~~~-~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i  270 (414)
                      .+...+++.+.+.+....-.-.++.+.....-   .|-+....++. .++.....+.+.+|.|-....++.-+.+.+
T Consensus       288 al~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~li  364 (509)
T COG3202         288 ALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLI  364 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHH
Confidence            88888888777766554433333322222221   22233444444 444556677888888765554444443333

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=97.98  E-value=4.5e-05  Score=71.39  Aligned_cols=109  Identities=17%  Similarity=0.263  Sum_probs=89.5

Q ss_pred             hhHHHHHHHHHHHHHHHHhh---hh------HHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCc--chhhHHHHHHHHHH
Q psy14075         61 LPMFTGFVIMFLSTLIFAFG---RT------YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD--RERGNAMGIALGGL  129 (414)
Q Consensus        61 ~~l~~~~~~~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~~r~~~~~~~~~~~  129 (414)
                      |++.++.+++.+|.++..++   .+      .+.++++-.+.++|.|..-|...++.+|.++++  ++|.+.+.++..+.
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i   81 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI   81 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            67788999999998885443   22      367888889999999999999999999999852  35788899999999


Q ss_pred             hhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075        130 ALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL  169 (414)
Q Consensus       130 ~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~  169 (414)
                      ++|..++..+.+++.++.||.+.|.+.++..++..+..+.
T Consensus        82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~  121 (372)
T PF00854_consen   82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS  121 (372)
T ss_dssp             HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999888776554443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=97.92  E-value=0.00077  Score=57.78  Aligned_cols=144  Identities=13%  Similarity=0.004  Sum_probs=79.8

Q ss_pred             chhhHHHHHHHHHHhhhhhhchhhhhHh---hh--hcCChhHHHHHHHHHHHHHHHHHHhccCC---CCC-CC-------
Q psy14075        116 RERGNAMGIALGGLALGVLIGPPFGGIM---YQ--FVGKTAPFLILSALALGDGLLQLLLLQPG---VVK-QE-------  179 (414)
Q Consensus       116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l---~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~~---~~~-~~-------  179 (414)
                      |+|+........+.++|.++....--.-   .+  .-.|++.+.+.+++.++.+++..++-++-   .++ ++       
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~   81 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTL   81 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccc
Confidence            5677777777888888887765432111   11  13599999999988888777766664331   111 11       


Q ss_pred             CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc-------------chhhHhHHHHHHHHhhhh
Q psy14075        180 VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW-------------QQGVSFLPASISYLIGTN  246 (414)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------------~~g~~~~~~~~~~~~~~~  246 (414)
                      +++.+..+.+|++..|...+.+......  .+..+.+.+.......++.             .......+.-.+..+|..
T Consensus        82 ~~~~s~~~~LK~K~tw~w~~~Yg~wLv~--~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~  159 (267)
T PF07672_consen   82 SKKPSYKSILKEKETWKWILIYGIWLVV--VVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPF  159 (267)
T ss_pred             cccchHHHHHccchHHHHHHHHHHHhee--EEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhce
Confidence            1235677899999888765554443321  2223233333322222222             112333444455556767


Q ss_pred             hhhhhhhh-hhhHHHH
Q psy14075        247 LFGPLGHR-MGRYLAA  261 (414)
Q Consensus       247 ~~g~l~d~-~~~~~~~  261 (414)
                      ..|...+. ++||+.+
T Consensus       160 ~ig~~nkt~~kRk~fi  175 (267)
T PF07672_consen  160 TIGLWNKTNYKRKPFI  175 (267)
T ss_pred             eeccchhhhhhhhhHH
Confidence            77777764 4555544

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=97.87  E-value=0.0018  Score=60.92  Aligned_cols=178  Identities=13%  Similarity=0.085  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075        193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL  272 (414)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~  272 (414)
                      ..+.++...++.....-+...-.|.++.+.+..+-.-.+.+-....+..++.....|.+.||.+|.+....+.+..-++.
T Consensus         3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv   82 (432)
T PF06963_consen    3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV   82 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence            44566777778778778888888999988765554444555555566777777888999999999887666544432221


Q ss_pred             ----HHhh--hh-hhh----HHHHHHHHHHHHHHHhhhhhhhhhhhhhhh--------cccccchhhHHhHHHHHHHHHH
Q psy14075        273 ----MMIP--LA-RNI----NHLIVPNAGLGFAIGMVDSSMMPELGYLVD--------IRHTAVYGSVYAIGDVAFCLGF  333 (414)
Q Consensus       273 ----~~~~--~~-~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~g~~~~~~~~g~  333 (414)
                          .++.  +. +..    ......++......+...-..........|        ..+++...+.++.+.-+-.+..
T Consensus        83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck  162 (432)
T PF06963_consen   83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK  162 (432)
T ss_pred             HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence                1111  11 110    111111111111112111111111111111        1245556788888888888899


Q ss_pred             hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075        334 AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      .++|.+.|.+.+..++.....+.++..+++..+-+++
T Consensus       163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~  199 (432)
T PF06963_consen  163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL  199 (432)
T ss_pred             HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998998888888888888877665443

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=97.83  E-value=2.3e-06  Score=83.26  Aligned_cols=157  Identities=18%  Similarity=0.168  Sum_probs=1.5

Q ss_pred             HHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----------h------
Q psy14075        218 WMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-----------N------  280 (414)
Q Consensus       218 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~------  280 (414)
                      -++++++++..+.|++.+.+-++.++..++..++.+|.+|-|.+..+.++++++.+++.+-+           +      
T Consensus        28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~  107 (539)
T PF03137_consen   28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS  107 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence            46788999999999999999999999999999999999998899999999999887765310           0      


Q ss_pred             ---------------------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHH
Q psy14075        281 ---------------------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDV  327 (414)
Q Consensus       281 ---------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~  327 (414)
                                                       ...+++..++.|+|..-.+   .--.+++-|..+++..+...|+...
T Consensus       108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~---tLG~tYiDDnv~~~~splYiGi~~~  184 (539)
T PF03137_consen  108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLY---TLGITYIDDNVSKKNSPLYIGILYA  184 (539)
T ss_dssp             --------------------------------------------SSS---------------------------------
T ss_pred             ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCc---cceeeeeccccccccCccchhhhhH
Confidence                                             0112334444455444333   2334556678888888889999988


Q ss_pred             HHHHHHhHHHHHHHHHHhh---------------------hc-hHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075        328 AFCLGFAIGPAMSGTLVNT---------------------IG-FEWMLFIIAILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       328 ~~~~g~~ig~~~~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (414)
                      ...+|-++|-.+++...+.                     .| |-..|.+.+.+.++..+..+.++|+..+.
T Consensus       185 ~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~  256 (539)
T PF03137_consen  185 MSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGT  256 (539)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             HhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence            8888888877777766532                     12 33345556666666666666666654443

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=97.78  E-value=0.011  Score=56.24  Aligned_cols=106  Identities=13%  Similarity=0.068  Sum_probs=58.3

Q ss_pred             hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH--h-h---------hhhhhHHHHHHHHHHHHHHHhh
Q psy14075        231 GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM--I-P---------LARNINHLIVPNAGLGFAIGMV  298 (414)
Q Consensus       231 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~--~-~---------~~~~~~~~~~~~~~~g~~~~~~  298 (414)
                      -..+..++++-.+|+.+..+..-.-.+.+.+.+..++-.+..-+  + .         ..++.+...+.++++|+..|..
T Consensus       310 ~i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~  389 (437)
T TIGR00939       310 IICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL  389 (437)
T ss_pred             HHHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence            45667788899999986654321111111222222222211111  1 1         2235556667788889888877


Q ss_pred             hhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075        299 DSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM  339 (414)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~  339 (414)
                      .+....   +..+..++++|..+-.++...-.+|-.+|..+
T Consensus       390 ~s~~m~---~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       390 GSLSMC---LAPRQVDPHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             HHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            544332   33444556677777777777777777776655

>PRK03612 spermidine synthase; Provisional

Probab=97.72  E-value=0.0075  Score=58.74  Aligned_cols=161  Identities=17%  Similarity=0.053  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHH-HHHHH-HHHHHHhh
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALL-GLLII-GICLMMIP  276 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-~~~~~-~i~~~~~~  276 (414)
                      +..++..++...........+...+|.+..+.+.+.+.+..+..+|+.+.+++.++..++....- ...+. .++..++.
T Consensus        21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~  100 (521)
T PRK03612         21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILY  100 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444455555555556666666788888888888888888999999888887644333322111 11111 11111111


Q ss_pred             hhhh-----hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchH
Q psy14075        277 LARN-----INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFE  350 (414)
Q Consensus       277 ~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~  350 (414)
                      ....     ........++.++..|+..|    ...........+..|...|-......+|+.+|+.+.+++.- ..|..
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~P----l~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~  176 (521)
T PRK03612        101 AAFAFQGLSRLLLYVLVLLIGLLIGMEIP----LLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLI  176 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence            1111     11122233344555555533    33333332222234667777788888999999999988764 67765


Q ss_pred             HHHHHHHHHHHHH
Q psy14075        351 WMLFIIAILDFMY  363 (414)
Q Consensus       351 ~~~~~~~~~~~~~  363 (414)
                      ....+.+.+.++.
T Consensus       177 ~t~~~~a~l~~~~  189 (521)
T PRK03612        177 RTAALTGSLNLLA  189 (521)
T ss_pred             HHHHHHHHHHHHH
Confidence            5544444444333

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=97.70  E-value=0.0047  Score=49.41  Aligned_cols=107  Identities=19%  Similarity=0.156  Sum_probs=79.6

Q ss_pred             HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy14075        233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDI  312 (414)
Q Consensus       233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  312 (414)
                      -.++......++.++.+.+.+++|.|+.+.++.+...+-.... +-++.+.++....+.|++.+..+.....   ++.+.
T Consensus        42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~---ylt~~  117 (156)
T PF05978_consen   42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT---YLTSY  117 (156)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH---HHHHc
Confidence            4455566677778888999999999999999988887654443 3345677788888999999988766554   45566


Q ss_pred             ccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075        313 RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL  343 (414)
Q Consensus       313 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l  343 (414)
                      ..++.+++..++.-...+.+..+|..+.-.+
T Consensus       118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6677888888888777777777777665444

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=97.66  E-value=0.0042  Score=55.68  Aligned_cols=151  Identities=25%  Similarity=0.430  Sum_probs=96.8

Q ss_pred             HHHHhhhhchHHHHHHHhCCCc--cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--h
Q psy14075        206 TGIAMLEPSLPIWMMDTMGADK--WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN--I  281 (414)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~g~~~--~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~  281 (414)
                      ..........+.+..+ .+.+.  ...++......+...++.++.|.+.||.|||+.+..+.....++.+...+..+  .
T Consensus        16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (338)
T COG0477          16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL   94 (338)
T ss_pred             HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence            3333344455555555 34444  36788888888899998899999999999987777776554444444444443  4


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccc-cchhhHHhHHHH-HHHHHHhHHHHHHHHHHhh--hchHHHHHHHH
Q psy14075        282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHT-AVYGSVYAIGDV-AFCLGFAIGPAMSGTLVNT--IGFEWMLFIIA  357 (414)
Q Consensus       282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~ig~~~~g~l~~~--~g~~~~~~~~~  357 (414)
                      +.........|++.+...+.....   ..+..|+ +.++...+.... ...++..++|.+.+.+.+.  .+|+..|....
T Consensus        95 ~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (338)
T COG0477          95 ALLLILRLLQGLGGGGLLPVASAL---LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAA  171 (338)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHH---HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            445555555667766554444433   4455554 567888888777 5777888888777777654  45666555444


Q ss_pred             HHH
Q psy14075        358 ILD  360 (414)
Q Consensus       358 ~~~  360 (414)
                      ...
T Consensus       172 ~~~  174 (338)
T COG0477         172 LLG  174 (338)
T ss_pred             HHH
Confidence            433

>KOG2563|consensus

Probab=97.66  E-value=0.00098  Score=61.60  Aligned_cols=127  Identities=13%  Similarity=-0.004  Sum_probs=87.8

Q ss_pred             HHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----h-hH--HHHHH
Q psy14075        216 PIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-----N-IN--HLIVP  287 (414)
Q Consensus       216 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~-~~--~~~~~  287 (414)
                      ..|..+.+| +...+-++..++.+..+...+.+-|+.||+|-|....++..+..++..+=..+.     + .+  .....
T Consensus        68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~G  146 (480)
T KOG2563|consen   68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTG  146 (480)
T ss_pred             HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHh
Confidence            345566677 556677888889999999999999999999999999999999999876544432     1 12  22233


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhh-hcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075        288 NAGLGFAIGMVDSSMMPELGYLV-DIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI  347 (414)
Q Consensus       288 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  347 (414)
                      ..+.+...-+.    ..+-+.+. --+++++|+.+..+..+...+|.+++..+-..+..+.
T Consensus       147 q~iaa~Aq~Fi----m~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~  203 (480)
T KOG2563|consen  147 QSIAAAAQPFI----LGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS  203 (480)
T ss_pred             HHHHHHhhhHh----hccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence            33333333222    11112222 3478999999999988888899888888777766543

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=97.60  E-value=0.00051  Score=64.31  Aligned_cols=116  Identities=14%  Similarity=0.100  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhhh---------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH
Q psy14075        259 LAALLGLLIIGICLMMIPLAR---------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF  329 (414)
Q Consensus       259 ~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  329 (414)
                      |+++++.++..+|.+++..+.         +...+.+.+.+.++|.|..-+...+..++-.+..+++++.+.+..+....
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i   81 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI   81 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            467788888888887755432         12467788888999999998888877665555444556788888999999


Q ss_pred             HHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075        330 CLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       330 ~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (414)
                      ++|..+++...+++.++.||...|.+.++..+++.+..+.-++..
T Consensus        82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y  126 (372)
T PF00854_consen   82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRY  126 (372)
T ss_dssp             HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT
T ss_pred             hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCC
Confidence            999999999999999999999999999999888887766655443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG3626|consensus

Probab=97.59  E-value=0.00076  Score=66.64  Aligned_cols=175  Identities=17%  Similarity=0.108  Sum_probs=121.4

Q ss_pred             HHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q psy14075        200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR  279 (414)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~  279 (414)
                      ..+...+.. .+....-.-+++.++++..+.|++...+-++..+...+..+...|.+|-+++-++.++++++.++..+.+
T Consensus       105 ~~~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPH  183 (735)
T KOG3626|consen  105 AAFAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPH  183 (735)
T ss_pred             HHHHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChH
Confidence            333333333 3333333447888999999999999999999999999999999999999999999999998877664310


Q ss_pred             -------------------h--------------------------------hH-HHHHHHHHHHHHHHhhhhhhhhhhh
Q psy14075        280 -------------------N--------------------------------IN-HLIVPNAGLGFAIGMVDSSMMPELG  307 (414)
Q Consensus       280 -------------------~--------------------------------~~-~~~~~~~~~g~~~~~~~~~~~~~~~  307 (414)
                                         +                                .+ .+.+..++.|+|....++.   -++
T Consensus       184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl---Gis  260 (735)
T KOG3626|consen  184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL---GIS  260 (735)
T ss_pred             HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC---CCc
Confidence                               0                                01 1233444444444333332   234


Q ss_pred             hhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh------------------hc-hHHHHHHHHHHHHHHHHHHH
Q psy14075        308 YLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT------------------IG-FEWMLFIIAILDFMYAPLLY  368 (414)
Q Consensus       308 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~------------------~g-~~~~~~~~~~~~~~~~~~~~  368 (414)
                      ++-|...++......|+..++.-+|-++|=.+++++...                  .| |-..|++.+.+.++..+..+
T Consensus       261 YiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f  340 (735)
T KOG3626|consen  261 YIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF  340 (735)
T ss_pred             cccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            455666777778899999988888888888888776542                  12 45567778888888888888


Q ss_pred             HhcCCCchhh
Q psy14075        369 LLRNPPTKEE  378 (414)
Q Consensus       369 ~~~~~~~~~~  378 (414)
                      ++++..++..
T Consensus       341 ~fPk~lp~~~  350 (735)
T KOG3626|consen  341 FFPKELPKSQ  350 (735)
T ss_pred             hCcccCcccc
Confidence            8887665543

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=97.56  E-value=0.0013  Score=61.00  Aligned_cols=129  Identities=10%  Similarity=0.130  Sum_probs=83.1

Q ss_pred             HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy14075        233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDI  312 (414)
Q Consensus       233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  312 (414)
                      ......+-.++..++..+..+|++-+.-+..+..++.+++++..++++.+.-++..++.+++.|.....+....    ..
T Consensus        64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt----~~  139 (402)
T PF02487_consen   64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT----HF  139 (402)
T ss_pred             HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH----Hh
Confidence            44445556666777788888988755555667778888888888888888778888888888888866555443    23


Q ss_pred             ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHh
Q psy14075        313 RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       313 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      +++.    ..+-..+....++.+|+...-.+.+ .|  .+..+.....+.++-.+..++.
T Consensus       140 y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~  194 (402)
T PF02487_consen  140 YGKS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFL  194 (402)
T ss_pred             cCcc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence            3332    2222333344566666666655555 45  5667777666665554444433

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=97.48  E-value=0.0008  Score=47.22  Aligned_cols=77  Identities=22%  Similarity=0.216  Sum_probs=65.3

Q ss_pred             HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHH
Q psy14075        207 GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHL  284 (414)
Q Consensus       207 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  284 (414)
                      +-+.+...+|...++ .++|..+.+++-+.+.++..+|.+...++.++.++++.+..+.+...+..+.+.+.++.+.+
T Consensus         7 gRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w   83 (85)
T PF06779_consen    7 GRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW   83 (85)
T ss_pred             HHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence            344556678886655 79999999999999999999999999999998888888999999999998888888776543

Note that many members are hypothetical proteins.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=97.27  E-value=0.034  Score=53.20  Aligned_cols=147  Identities=8%  Similarity=-0.096  Sum_probs=86.1

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCC-----ccchhhHhHHHHHHHHhh-hhhhhhhhhhhhhHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGAD-----KWQQGVSFLPASISYLIG-TNLFGPLGHRMGRYLAALLGL  265 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~~g~~~~~~~~~~~~~-~~~~g~l~d~~~~~~~~~~~~  265 (414)
                      |++....+..++..+.++..     .-++|....+     .+...++.....+...+. .++.+++++|++|+++.....
T Consensus         7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~   81 (472)
T TIGR00769         7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI   81 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence            45555555555555554433     2245665552     245566665555554444 778899999999998877655


Q ss_pred             HHHHHHHHHhhhh-----hh--------------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy14075        266 LIIGICLMMIPLA-----RN--------------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH  314 (414)
Q Consensus       266 ~~~~i~~~~~~~~-----~~--------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  314 (414)
                      ......++++.+.     +.                          .|...+.-+..-+-.....+  ....+...|...
T Consensus        82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS--~lFW~fandi~t  159 (472)
T TIGR00769        82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLS--LLFWGFANQITT  159 (472)
T ss_pred             HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHH--HHHHHHHHhcCC
Confidence            5555544443332     00                          11111111111111111111  122345678888


Q ss_pred             ccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075        315 TAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN  345 (414)
Q Consensus       315 ~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~  345 (414)
                      .++..+-+++.....++|..+++.+..++.+
T Consensus       160 ~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       160 IDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888999999999999999999999888763

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG0637|consensus

Probab=96.98  E-value=0.0045  Score=57.43  Aligned_cols=149  Identities=20%  Similarity=0.222  Sum_probs=96.5

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhhHHHH-HHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGRYLAA-LLGLL  266 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~-~~~~~  266 (414)
                      ++........+...+++..-..+.|.|+++ .|.+....+......-+.+.+-+++.|..+||    +||||.. ..+..
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~  110 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL  110 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence            344444555555667777788899999988 69999999998888888999999999999996    6776554 45666


Q ss_pred             HHHHHHHHhhhhhhhH------------HHHHHHHHHHHH--HHhhhhhhhhhhhhhhhcccccchhh-HHhHHHHHHHH
Q psy14075        267 IIGICLMMIPLARNIN------------HLIVPNAGLGFA--IGMVDSSMMPELGYLVDIRHTAVYGS-VYAIGDVAFCL  331 (414)
Q Consensus       267 ~~~i~~~~~~~~~~~~------------~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~  331 (414)
                      ..++++.+++++.+..            ...+...+.|+-  --.......+.=++..|....+++-+ +++.+.....+
T Consensus       111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av  190 (498)
T KOG0637|consen  111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV  190 (498)
T ss_pred             HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence            6677777777654321            122223333321  11122223333344555544444444 88888888888


Q ss_pred             HHhHHHHHHH
Q psy14075        332 GFAIGPAMSG  341 (414)
Q Consensus       332 g~~ig~~~~g  341 (414)
                      |+.+|-.+.+
T Consensus       191 GnvLGY~~g~  200 (498)
T KOG0637|consen  191 GNVLGYALGS  200 (498)
T ss_pred             cceeeeeccc
Confidence            8888766655

>PRK03612 spermidine synthase; Provisional

Probab=96.82  E-value=0.029  Score=54.70  Aligned_cols=143  Identities=19%  Similarity=0.158  Sum_probs=89.5

Q ss_pred             hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHH--HH-HHHHHH----HhhhhH-HHHHHHHHHH
Q psy14075         22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI--MF-LSTLIF----AFGRTY-GVLFLARSLQ   93 (414)
Q Consensus        22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~--~~-~~~~~~----~~~~~~-~~l~~~r~l~   93 (414)
                      ..-+|.+..+.+.+.+++..+.++++.+.+++.++--++ ...+-..+  .+ ++..+.    ++.... ..++..-++.
T Consensus        42 ~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~  120 (521)
T PRK03612         42 SYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI  120 (521)
T ss_pred             HHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345677888899999999999999999999887432222 22221111  11 111111    111111 1223344567


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-hhcCChhHHHHHHHHHHHHHHHH
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-QFVGKTAPFLILSALALGDGLLQ  167 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~~~~~~~  167 (414)
                      ++..|+..|....+..+..  +++-++..|.......+|.++|.++.+++. ..+|-....++.+.+.++..++.
T Consensus       121 ~~l~G~~~Pl~~~~~~~~~--~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~  193 (521)
T PRK03612        121 GLLIGMEIPLLMRILQRIR--DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF  193 (521)
T ss_pred             HHHHHHHHHHHHHHHHhcc--ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence            8888888888777665542  235678889999999999999999887765 46776555555555555544433

>KOG3880|consensus

Probab=96.76  E-value=0.015  Score=51.17  Aligned_cols=137  Identities=16%  Similarity=0.222  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhc
Q psy14075         32 VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAER  111 (414)
Q Consensus        32 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~  111 (414)
                      .|.+.-+-.+...+..+......||+---.=..+..++.+.+..+.+++++.++=+.+-.+..++.|..-..-.++-+. 
T Consensus        64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-  142 (409)
T KOG3880|consen   64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-  142 (409)
T ss_pred             cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence            4666667777888888888889999765444455667778888888999999999999888888888776665544433 


Q ss_pred             CCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh--cCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075        112 YPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF--VGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus       112 ~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      ++     ....+.++.+.+.++++|..--..+.+.  ++.|.+.++...+.++.+...++.++++
T Consensus       143 Y~-----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p  202 (409)
T KOG3880|consen  143 YP-----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP  202 (409)
T ss_pred             CC-----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence            33     2334555666666666666554555542  4578888888888888777777776543

>KOG1237|consensus

Probab=96.36  E-value=0.084  Score=51.96  Aligned_cols=172  Identities=14%  Similarity=0.084  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHHHHHHHHHHHHhhh
Q psy14075        199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLGLLIIGICLMMIPL  277 (414)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~i~~~~~~~  277 (414)
                      ..-.+...++.++...+-.|+.+.++.+...+.-......-......++.++++|- .||-+++.++..+..++..++..
T Consensus        44 ~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~  123 (571)
T KOG1237|consen   44 GNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTL  123 (571)
T ss_pred             HHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444556666666778888888889888666666666666677777889999996 47878888887777777655543


Q ss_pred             hhhh-------------------------HHHHHHHHHHHHHHHhhhhhhhhhhhhhhh-cccccc--hhhHHhHHHHHH
Q psy14075        278 ARNI-------------------------NHLIVPNAGLGFAIGMVDSSMMPELGYLVD-IRHTAV--YGSVYAIGDVAF  329 (414)
Q Consensus       278 ~~~~-------------------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~--~g~~~g~~~~~~  329 (414)
                      ....                         ..+.....+..+|.|..-+...+.-+.-.| ..|.+.  ...-+.......
T Consensus       124 ~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~  203 (571)
T KOG1237|consen  124 SAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQ  203 (571)
T ss_pred             HHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHH
Confidence            2111                         122233333344555544433333222222 112222  236677778888


Q ss_pred             HHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075        330 CLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       330 ~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      +.|..+...+.-++.|+.||...|.+..++.+++.++.+..
T Consensus       204 ~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g  244 (571)
T KOG1237|consen  204 NGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG  244 (571)
T ss_pred             HHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence            99999999999898899999999988888888877766543

>KOG1479|consensus

Probab=96.21  E-value=1  Score=41.85  Aligned_cols=134  Identities=16%  Similarity=0.087  Sum_probs=63.1

Q ss_pred             HHHHhhhhchHHHHHHHhCCC---ccchhhHhHH-HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh------
Q psy14075        206 TGIAMLEPSLPIWMMDTMGAD---KWQQGVSFLP-ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI------  275 (414)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~g~~---~~~~g~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~------  275 (414)
                      ..+.......|-+..+..+-.   ....-+.... +++...+|.+...+..++-+|+.......=...+-++.+      
T Consensus       257 lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~  336 (406)
T KOG1479|consen  257 LVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPL  336 (406)
T ss_pred             eeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCC
Confidence            344455556777776643222   2223334444 677788887666665554333222222111222222221      


Q ss_pred             -hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075        276 -PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL  343 (414)
Q Consensus       276 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l  343 (414)
                       ....+.+.......++|+..|-.......   +..+..|++++ .+.|....+...++.....+.+++
T Consensus       337 ~v~~~~~~~~~~l~~~lglsnGYltsl~m~---~aPk~v~~~e~-e~aG~~m~~fl~~Gl~~G~~~s~l  401 (406)
T KOG1479|consen  337 PVVFESDGWFIFLMSLLGLSNGYLTSLIMM---YAPKQVKPSEK-EAAGNLMVFFLVGGLALGSLLSWV  401 (406)
T ss_pred             CceecCchHHHHHHHHHHhccchHhhheeh---hcCCCCChHHH-HHHHHHHHHHHHHHHHHhhHHHHH
Confidence             12345566677777888877765433222   23344455543 344444444434333333333444

>KOG3097|consensus

Probab=95.74  E-value=0.16  Score=45.41  Aligned_cols=227  Identities=16%  Similarity=0.102  Sum_probs=124.5

Q ss_pred             HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCC-cch
Q psy14075         39 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD-DRE  117 (414)
Q Consensus        39 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~~  117 (414)
                      ..+....+..+.+.+..++|.|+++.++...+...... =+-+.+..++-.-...|++.+..+..--+++++.-.. .++
T Consensus        67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~  145 (390)
T KOG3097|consen   67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ  145 (390)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence            34555667777779999999999999988877755333 2456788888899999999999988777776655321 123


Q ss_pred             h---------hHHHHHHHHHHhhhhhhchhhhhHhhh----h--------c----C------------------------
Q psy14075        118 R---------GNAMGIALGGLALGVLIGPPFGGIMYQ----F--------V----G------------------------  148 (414)
Q Consensus       118 r---------~~~~~~~~~~~~~g~~ig~~l~~~l~~----~--------~----g------------------------  148 (414)
                      |         .+-.+.+.+.+..+..+|..++..+..    .        +    |                        
T Consensus       146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lv  225 (390)
T KOG3097|consen  146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILV  225 (390)
T ss_pred             hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEE
Confidence            4         344556655555555555444433221    1        0    0                        


Q ss_pred             ChhHHHHHHHHHHHHHHHHHH-hccCC-CCCCCCCCch----hhhhccChHHHHHHHHHHHHHHHHHhh-hhchHHHHHH
Q psy14075        149 KTAPFLILSALALGDGLLQLL-LLQPG-VVKQEVEPPT----LKSLVMDPYILIAAGAITFANTGIAML-EPSLPIWMMD  221 (414)
Q Consensus       149 w~~~f~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  221 (414)
                      -..+|+-..++.........- ..++. ++-.+.....    .-+.++++++...+-...+...-.... ..+.-.|..-
T Consensus       226 ls~i~L~c~via~~~~~~~~~~l~r~~~~r~~~~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c  305 (390)
T KOG3097|consen  226 LSLIFLPCMVIAVLIMLFFLGALKRYGEKRLASVSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVAC  305 (390)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhh
Confidence            011233332222211111110 11111 1111111110    112345666544333222222221111 1122222222


Q ss_pred             HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075        222 TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII  268 (414)
Q Consensus       222 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~  268 (414)
                        +..-...+..+..+++...+.+.+.|.+.++++|......+.+.-
T Consensus       306 --~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~  350 (390)
T KOG3097|consen  306 --ALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVH  350 (390)
T ss_pred             --hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHH
Confidence              233447889999999999999999999999999988776665443

>KOG4332|consensus

Probab=95.69  E-value=0.073  Score=46.11  Aligned_cols=144  Identities=16%  Similarity=0.095  Sum_probs=83.7

Q ss_pred             HHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy14075        217 IWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIG  296 (414)
Q Consensus       217 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~  296 (414)
                      +|+.+++|+...++|.++.......++...+.|-++||.|||+..+.-.+...++++. -.++++..+.+.-.+-|+...
T Consensus        61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVGR~LGGiaTs  139 (454)
T KOG4332|consen   61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVGRVLGGIATS  139 (454)
T ss_pred             eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeehhhhhhHHHH
Confidence            3455668888889998887766666777778889999999998765544444443321 233445555666777777777


Q ss_pred             hhhhhhhhhhhhhhhcc-----cccchhhHHhHHH-HHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHH
Q psy14075        297 MVDSSMMPELGYLVDIR-----HTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFMY  363 (414)
Q Consensus       297 ~~~~~~~~~~~~~~~~~-----~~~~~g~~~g~~~-~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~  363 (414)
                      ..++.+-+..  +.|..     +++-....++-.. ....+-.++....+..+.|.++  .-..|-..+.+..++
T Consensus       140 LLFSaFEsWl--iaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaig  212 (454)
T KOG4332|consen  140 LLFSAFESWL--IAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIG  212 (454)
T ss_pred             HHHHHHHHHH--HHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHH
Confidence            7766666553  34432     2222222222222 2233445555555566677655  444454444444443

>KOG2601|consensus

Probab=95.23  E-value=0.2  Score=45.63  Aligned_cols=125  Identities=17%  Similarity=0.128  Sum_probs=74.1

Q ss_pred             HHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH------hh-h-----hHHHHHHHHHHHhhhhhhhhhh-
Q psy14075         37 GSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA------FG-R-----TYGVLFLARSLQGIGSSCSSVS-  103 (414)
Q Consensus        37 s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~-~-----~~~~l~~~r~l~G~~~~~~~~~-  103 (414)
                      ..-.....+..++.|...|+..|+|++...+++--++.++++      +. +     ++..+..+.++.-...+..... 
T Consensus        70 lvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las  149 (503)
T KOG2601|consen   70 LVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLAS  149 (503)
T ss_pred             HHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHH
Confidence            334455677888899999999999998887766554444433      21 2     4445544444433322221111 


Q ss_pred             ---HHHHHhhcC----CCcchhhHH---HHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHH
Q psy14075        104 ---GMGMLAERY----PDDRERGNA---MGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG  162 (414)
Q Consensus       104 ---~~~~i~~~~----~~~~~r~~~---~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~  162 (414)
                         ...+-.||.    . .+.+...   ++.....-...-.+.|.+.|.+.+..+-|..-.+.++-.++
T Consensus       150 ~A~~i~i~RDWvvV~s~-g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v  217 (503)
T KOG2601|consen  150 LAGTILIERDWVVVMSE-GESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV  217 (503)
T ss_pred             hhheEEecccEEEEecC-CCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence               111223333    2 1334443   46666667777889999999999888888765555555555

>KOG3098|consensus

Probab=94.99  E-value=0.55  Score=44.71  Aligned_cols=101  Identities=17%  Similarity=0.295  Sum_probs=77.1

Q ss_pred             HHHHHHHhhhHHHHhhc---ccCCchhHHHHHHHHHHHHHHHHhh------------------hhHHHHHHHHHHHhhhh
Q psy14075         39 KAFVQLLANPLVGILTH---RVGYSLPMFTGFVIMFLSTLIFAFG------------------RTYGVLFLARSLQGIGS   97 (414)
Q Consensus        39 ~~~~~~~~~~~~G~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~   97 (414)
                      ..++..++..+.+.+.+   |+||++.+.++.++..++.++.-..                  +++...++.-++.|++-
T Consensus       288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D  367 (461)
T KOG3098|consen  288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD  367 (461)
T ss_pred             HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence            33445555555666664   5899999999998888888776542                  14557777889999999


Q ss_pred             hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhh
Q psy14075         98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGG  141 (414)
Q Consensus        98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~  141 (414)
                      +......+.++++.+|  ++|..+.++.-.-..++..++-....
T Consensus       368 ~~~~t~~~~ii~~~~~--~~~~~~fsi~kfyq~~~s~v~~f~~~  409 (461)
T KOG3098|consen  368 ACFNTQRYVIIALLYP--DDRAQAFSLFKFYQSVASCVAFFFSP  409 (461)
T ss_pred             HHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence            9999999999999995  68999999988888888776655443

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=94.77  E-value=1.5  Score=41.99  Aligned_cols=29  Identities=7%  Similarity=0.174  Sum_probs=14.5

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc
Q psy14075        284 LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA  316 (414)
Q Consensus       284 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  316 (414)
                      .....++.|++.+..+.....    ....+|++
T Consensus       109 ~~~~v~~~g~~~~~~q~s~~g----la~~fp~~  137 (437)
T TIGR00939       109 TMASVVIINSGMALLQGSLFG----LAGVFPST  137 (437)
T ss_pred             HHHHHHHHHhhhhhhcccchh----hcccCCHH
Confidence            344455556666655544443    33455643

>KOG1479|consensus

Probab=94.73  E-value=3.4  Score=38.58  Aligned_cols=58  Identities=14%  Similarity=-0.076  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075        193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG  252 (414)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~  252 (414)
                      .++..++...-....++.+.+--+.|.++..+.++  .-.+...+.+...+...+...+-
T Consensus        19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n   76 (406)
T KOG1479|consen   19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLN   76 (406)
T ss_pred             HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444444444456667777777766665444443  33444444444444444444433

>KOG2601|consensus

Probab=94.23  E-value=1.1  Score=41.05  Aligned_cols=167  Identities=16%  Similarity=0.049  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH----
Q psy14075        195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI----  270 (414)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i----  270 (414)
                      +.+...++....+-=+...-...|+.+..|-|-......-..-+....+-..+.|...|+..|+|++...+.+.=+    
T Consensus        30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v  109 (503)
T KOG2601|consen   30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV  109 (503)
T ss_pred             ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence            3344444444444444444455666664443333333333334445555556677888999998876654433222    


Q ss_pred             --HHHHhhhhh------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhh---------hhcccccchhhHHhHHHHHHHHHH
Q psy14075        271 --CLMMIPLAR------NINHLIVPNAGLGFAIGMVDSSMMPELGYL---------VDIRHTAVYGSVYAIGDVAFCLGF  333 (414)
Q Consensus       271 --~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~g~~~g~~~~~~~~g~  333 (414)
                        +++...+.+      +.+ +...+.++....+...-.....-...         .+..+++.....++.....-..-.
T Consensus       110 agglvi~~l~~~~~~~~t~p-v~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn  188 (503)
T KOG2601|consen  110 AGGLVITLLVHKDLKSATSP-VFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN  188 (503)
T ss_pred             HHHHHhhheeecchhccccc-HHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence              222222221      222 22222222222222211111100011         122333333444466666667778


Q ss_pred             hHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy14075        334 AIGPAMSGTLVNTIGFEWMLFIIAILDFM  362 (414)
Q Consensus       334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~  362 (414)
                      .+.|.+.|.+....+.+..-...++-..+
T Consensus       189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v  217 (503)
T KOG2601|consen  189 LLAPVITGLIITFVSLRASAGTFAAWALV  217 (503)
T ss_pred             chhhhhhcccceeechhhhhhhhHHHHHH
Confidence            89999999998877766544444444433

>KOG3574|consensus

Probab=93.37  E-value=1.5  Score=40.35  Aligned_cols=81  Identities=14%  Similarity=0.239  Sum_probs=46.6

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh-----hhhhHHHHHH-HH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH-----RMGRYLAALL-GL  265 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~~~~-~~  265 (414)
                      +.+..+.+.+..+........ .+|..++. .|.|-.+.+.+...+.=-.  -.++...++|     |+||||..++ +.
T Consensus        31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWvvp~q  106 (510)
T KOG3574|consen   31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWVVPCQ  106 (510)
T ss_pred             hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhccccceeeehH
Confidence            355566666677766665555 88988875 4777666554433322111  2456667777     9998876443 44


Q ss_pred             HHHHHHHHHhh
Q psy14075        266 LIIGICLMMIP  276 (414)
Q Consensus       266 ~~~~i~~~~~~  276 (414)
                      .+.+..+..+.
T Consensus       107 ~llG~~mllLs  117 (510)
T KOG3574|consen  107 YLLGLFMLLLS  117 (510)
T ss_pred             HHHHHHHHHHh
Confidence            44444444443

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=92.01  E-value=1.1  Score=42.65  Aligned_cols=68  Identities=16%  Similarity=0.166  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHH-HhCCCccchhhHhH---HHHHHHHhhhhhhhhhhhhhhhHHHHHH
Q psy14075        196 IAAGAITFANTGIAMLEPSLPIWMMD-TMGADKWQQGVSFL---PASISYLIGTNLFGPLGHRMGRYLAALL  263 (414)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~~---~~~~~~~~~~~~~g~l~d~~~~~~~~~~  263 (414)
                      ++.+.++++.........-.|..+++ ..+.|-.+.+.+..   ++++=-.=+.++=....+|+||||..++
T Consensus         4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWii   75 (544)
T PF13000_consen    4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWII   75 (544)
T ss_pred             HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhh
Confidence            45556666666665555678888877 12455555554332   2333223333344445568898876554

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype

Probab=91.94  E-value=11  Score=35.46  Aligned_cols=24  Identities=29%  Similarity=0.170  Sum_probs=12.1

Q ss_pred             hhhHHHHHHHHHHhhhhhhchhhh
Q psy14075        117 ERGNAMGIALGGLALGVLIGPPFG  140 (414)
Q Consensus       117 ~r~~~~~~~~~~~~~g~~ig~~l~  140 (414)
                      +|.+.....-...-...++-|+++
T Consensus       123 eR~~~~~~~v~~~~~~~~vY~~~a  146 (404)
T TIGR03644       123 ERMKLWPFLLFAVVLTGFIYPIEG  146 (404)
T ss_pred             hcccHHHHHHHHHHHHHHHHhhhh
Confidence            344444444444444555555554

Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=89.55  E-value=4.9  Score=37.74  Aligned_cols=14  Identities=29%  Similarity=0.240  Sum_probs=6.3

Q ss_pred             Hhhhhhhhhhhhhh
Q psy14075        242 LIGTNLFGPLGHRM  255 (414)
Q Consensus       242 ~~~~~~~g~l~d~~  255 (414)
                      ++..+..|++..|.
T Consensus         9 i~~ii~~G~~~~~~   22 (385)
T PF03547_consen    9 IFLIILLGYLLGRF   22 (385)
T ss_pred             HHHHHHHHHHHHHh
Confidence            33344445555443

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>KOG3810|consensus

Probab=89.48  E-value=2.3  Score=38.68  Aligned_cols=136  Identities=14%  Similarity=0.046  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHhhhHHHHhhcccCCch--hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhh
Q psy14075         33 GVMFGSKAFVQLLANPLVGILTHRVGYSL--PMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAE  110 (414)
Q Consensus        33 g~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~  110 (414)
                      |..-+...+..+++.+..|.+--++.|..  .+.++.+..+...+.++-++++|..+++.++.+.-.....+.+..-+++
T Consensus       274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~  353 (433)
T KOG3810|consen  274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR  353 (433)
T ss_pred             CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence            66667778888899999999998888763  3445666666666777788999999999998888888888888888888


Q ss_pred             cCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-----------ChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075        111 RYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-----------KTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus       111 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-----------w~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      ... ++.-|..+|+......   ++=.++.-.+.|.-|           +..-|.+.+.+.++.........+
T Consensus       354 nL~-~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~  422 (433)
T KOG3810|consen  354 NLS-SELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCR  422 (433)
T ss_pred             hhh-hhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhh
Confidence            887 4788888888765432   233333333334211           233467777777776555554443

>KOG4830|consensus

Probab=87.59  E-value=0.14  Score=44.00  Aligned_cols=155  Identities=15%  Similarity=0.091  Sum_probs=73.8

Q ss_pred             hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHH-HH
Q psy14075        184 TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLA-AL  262 (414)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-~~  262 (414)
                      +|..-+++-.+....+...+.-...+....++|.|..+.++++.....++-.+..+....-+.+..-..-.-.|++. ..
T Consensus       193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYs  272 (412)
T KOG4830|consen  193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYS  272 (412)
T ss_pred             cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeee
Confidence            44455666667777777777777777778888888877777766555554444444444333332211101112222 22


Q ss_pred             HHHHHHHHHHHHhhh-hhhhHH-HHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075        263 LGLLIIGICLMMIPL-ARNINH-LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM  339 (414)
Q Consensus       263 ~~~~~~~i~~~~~~~-~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~  339 (414)
                      .|.+....+...+.+ .++... .+....+.|+..........+...... ....+..+...|.....-.+...+.-.+
T Consensus       273 aGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli-~~~~~~~aFv~GamSF~DKlS~GiA~~l  350 (412)
T KOG4830|consen  273 AGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLI-NKNTESGAFVYGAMSFFDKLSNGIAYQL  350 (412)
T ss_pred             cccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccCCceEEEehHHHHHhhcccHHHHH
Confidence            233333322222222 222211 233344455555544322222222122 1223344556666666666655554443

>KOG3880|consensus

Probab=85.58  E-value=3.5  Score=36.87  Aligned_cols=75  Identities=15%  Similarity=0.182  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHh
Q psy14075         68 VIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM  143 (414)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l  143 (414)
                      +++.+......+.+++|..++.-+.-|+-.|..++-..--+.+-.+| ++|..+++....+.++|..++..++-.+
T Consensus       327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~p-d~rEfamsavs~sDS~Gi~lA~~lalpl  401 (409)
T KOG3880|consen  327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEP-DVREFAMSAVSISDSIGIFLAGLLALPL  401 (409)
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCc-hHHHHhHhhheecchhhHHHHHHHhccc
Confidence            34455555667789999999999999988888777777667776775 8999999999999999988877765433

>TIGR00836 amt ammonium transporter

Probab=85.12  E-value=35  Score=32.28  Aligned_cols=24  Identities=25%  Similarity=0.243  Sum_probs=12.3

Q ss_pred             hhhHHHHHHHHHHhhhhhhchhhh
Q psy14075        117 ERGNAMGIALGGLALGVLIGPPFG  140 (414)
Q Consensus       117 ~r~~~~~~~~~~~~~g~~ig~~l~  140 (414)
                      +|.+...+.....-....+-|+++
T Consensus       116 eR~~~~~~~v~~~~~~~~vY~~~a  139 (403)
T TIGR00836       116 ERMKFSAYLLFSVLWTTLVYPPVA  139 (403)
T ss_pred             hcccHHHHHHHHHHHHHHHHHhcc
Confidence            445555555555455555555553

The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=82.35  E-value=34  Score=31.35  Aligned_cols=32  Identities=9%  Similarity=0.136  Sum_probs=17.0

Q ss_pred             HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy14075        336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL  367 (414)
Q Consensus       336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  367 (414)
                      -..+.+....+...++.+.+..++.+++.++.
T Consensus       272 ~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy  303 (334)
T PF06027_consen  272 YALIIDIFFFGYKFSWLYILAFALIIIGFVVY  303 (334)
T ss_pred             HHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence            34455555555556666666555555544443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=82.21  E-value=0.48  Score=43.01  Aligned_cols=104  Identities=17%  Similarity=0.126  Sum_probs=1.6

Q ss_pred             hHhHHHHHHHHhhhhhhhhhhhhh-hhHHHHHHHHHHHHHH--HHHhh-----------hhhhhHHHHHHHHHHHHHHHh
Q psy14075        232 VSFLPASISYLIGTNLFGPLGHRM-GRYLAALLGLLIIGIC--LMMIP-----------LARNINHLIVPNAGLGFAIGM  297 (414)
Q Consensus       232 ~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~i~--~~~~~-----------~~~~~~~~~~~~~~~g~~~~~  297 (414)
                      ..+..++++-.+|+.+..+..-+. ++|++. +..+.-.+.  ++++.           ..++.+...+.++++|+..|.
T Consensus       186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy  264 (309)
T PF01733_consen  186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY  264 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence            356678899999999877643221 233333 222221111  11111           123445556677888888887


Q ss_pred             hhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075        298 VDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM  339 (414)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~  339 (414)
                      ..+....   +..+..++++|..+-.++...-.+|-.+|..+
T Consensus       265 l~tl~m~---~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l  303 (309)
T PF01733_consen  265 LSTLAMM---YAPKSVSPEERELAGSVMSFFLSFGLFIGSVL  303 (309)
T ss_dssp             --HHHH------------------------------------
T ss_pred             hhhceee---eCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7544333   33444555566666666666566666666654

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=80.61  E-value=14  Score=32.27  Aligned_cols=21  Identities=10%  Similarity=0.238  Sum_probs=9.8

Q ss_pred             HHHHHHHHHHHHHHHHhcCCC
Q psy14075        354 FIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~  374 (414)
                      ++..++.+++..+..+.+.+.
T Consensus       119 ~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen  119 YIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             HHHHHHHHHHHHheeeecCCC
Confidence            344444455555544444433

The region concerned is approximately 280 residues long.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	414
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	3e-17
2cfq_A	417	Lactose permease; transport, transport mechanism,	2e-13
2cfq_A	417	Lactose permease; transport, transport mechanism,	2e-07
2cfq_A	417	Lactose permease; transport, transport mechanism,	7e-07
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	3e-12

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 58/314 (18%), Positives = 103/314 (32%), Gaps = 16/314 (5%)

Query: 40  AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSC 99
              QL   P+    + RVG    +  G  I  L+TL+     +  VL  A ++QG+G+  
Sbjct: 49  GVSQLFYGPI----SDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGV 104

Query: 100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 159
             V    +  + Y +  +  +A  +   G+ +  L+ P  GG++       A +L L  L
Sbjct: 105 GGVMARTLPRDLY-ERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVL 163

Query: 160 ALGDGLLQLLLLQPGVVKQEVEPPTLKS---LVMDPYILIAAGAITFANTGIAMLEPSLP 216
             G        +             L S   L  +         +     GIA  E    
Sbjct: 164 CAGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSG 223

Query: 217 IWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP 276
           + M   +G       + F+    +   G    G    R    +   +   ++   LM IP
Sbjct: 224 VLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIP 283

Query: 277 LARNINHL---IVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYA-IGDVAFCLG 332
               + ++   +VP A   F  GM+        G +      A  G+  A +G +     
Sbjct: 284 DWFGVMNVWTLLVPAALFFFGAGMLFPLAT--SGAMEPFPFLA--GTAGALVGGLQNIGS 339

Query: 333 FAIGPAMSGTLVNT 346
             +    +      
Sbjct: 340 GVLASLSAMLPQTG 353

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 70.3 bits (172), Expect = 2e-13
 Identities = 54/365 (14%), Positives = 111/365 (30%), Gaps = 20/365 (5%)

Query: 32  VGVMFGSKAFVQLLANPLVGILTHRVGYS---LPMFTGFVIMFLSTLIFAFGRTYGVLFL 88
            G++F + +   LL  PL G+L+ ++G     L + TG ++MF    IF FG       L
Sbjct: 45  TGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNIL 104

Query: 89  ARSLQGIGSSCSSVSGMGMLAERYPDD--RERGNAMGIALGGLALGVLIGPPFGGIMYQF 146
             S+ G        +      E + +   R      G A     +G  +G    GIM+  
Sbjct: 105 VGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI 164

Query: 147 VGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT----------LKSLVMDPYILI 196
             +   +L      +   LL                               L   P +  
Sbjct: 165 NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWF 224

Query: 197 AAGAITFANTGIAMLEPSLPI---WMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH 253
            +  +   +    + +            T        G       +           + +
Sbjct: 225 LSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIIN 284

Query: 254 RMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313
           R+G   A LL   I+ + ++    A +   +++      F +  +       +    ++R
Sbjct: 285 RIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVR 344

Query: 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373
            +A    V         L       ++G +  +IGF+    ++ ++   +  +     + 
Sbjct: 345 FSATIYLVCFC--FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSG 402

Query: 374 PTKEE 378
           P    
Sbjct: 403 PGPLS 407

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 7/182 (3%)

Query: 203 FANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR----Y 258
           F   G     P  PIW+ D     K   G+ F   S+  L+   LFG L  ++G      
Sbjct: 20  FFIMGAYF--PFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLL 77

Query: 259 LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318
                 L++     + I       +++V +   G  +G   ++  P        + +   
Sbjct: 78  WIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAP-AVEAFIEKVSRRS 136

Query: 319 GSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEE 378
              +    +  C+G+A+G ++ G +                  +   L +   + P+   
Sbjct: 137 NFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSAT 196

Query: 379 KK 380
             
Sbjct: 197 VA 198

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 22/145 (15%), Positives = 51/145 (35%), Gaps = 2/145 (1%)

Query: 29  TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFL 88
           T+  G +      +         ++ +R+G    +     IM +  +  +F  +   + +
Sbjct: 258 TRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVI 317

Query: 89  ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALG-GLALGVLIGPPFGGIMYQFV 147
            ++L         V     +  ++   R       +       L ++      G MY+ +
Sbjct: 318 LKTLHMFEVPFLLVGCFKYITSQFEV-RFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI 376

Query: 148 GKTAPFLILSALALGDGLLQLLLLQ 172
           G    +L+L  +ALG  L+ +  L 
Sbjct: 377 GFQGAYLVLGLVALGFTLISVFTLS 401

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 47/378 (12%), Positives = 113/378 (29%), Gaps = 45/378 (11%)

Query: 45  LANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVLFLARSLQGIGSSCS 100
            +  ++G ++ R    + +  G ++     L   F      +  V+F+   L G      
Sbjct: 77  FSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMG 136

Query: 101 SVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPP-FGGIMYQFVGKTAPFLILSAL 159
                  +   +   +ERG  + +      +G  I P  F   M  F    A   + +  
Sbjct: 137 WPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFC 195

Query: 160 ALGDGLLQLLLL-----QPGVVKQEVE-------------------PPTLKSLVMDPYIL 195
           A+   L    ++       G+   E                        ++ ++ +  + 
Sbjct: 196 AILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLW 255

Query: 196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYL---IGTNLFGPL- 251
             A A  F       +    P ++ +       +         +       GT L G + 
Sbjct: 256 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSS---WAYFLYEYAGIPGTLLCGWMS 312

Query: 252 ----GHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELG 307
                   G      + L+ I   +  +  A N    ++    +GF I      +     
Sbjct: 313 DKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIG---L 369

Query: 308 YLVDIRHTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366
           + +++      G+         +  G     A+ G  V+  G++    ++     +   L
Sbjct: 370 HALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 429

Query: 367 LYLLRNPPTKEEKKVGRQ 384
           L ++     +  +++ ++
Sbjct: 430 LIVVMIGEKRRHEQLLQE 447

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	414
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	100.0
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	100.0
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	100.0
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	100.0
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	100.0
2cfq_A	417	Lactose permease; transport, transport mechanism,	100.0
2xut_A	524	Proton/peptide symporter family protein; transport	99.98
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.73
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.71
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.7
2xut_A	524	Proton/peptide symporter family protein; transport	99.65
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.63
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.43
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.32

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=100.00  E-value=1.5e-41  Score=324.70  Aligned_cols=351  Identities=13%  Similarity=0.077  Sum_probs=300.9

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF----GRTYGVLFLARSL   92 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l   92 (414)
                      ..|.+.+++ .++.++|++.+++.++..++++++|+++||+|||++++++.++.+++.+++++    +++++.++++|++
T Consensus        50 ~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l  128 (451)
T 1pw4_A           50 AMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFL  128 (451)
T ss_dssp             HHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHH
T ss_pred             HHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHH
Confidence            357788899 99999999999999999999999999999999999999999999999999999    9999999999999


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHHHHHHHHHHhc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      +|++.+...+...+++.|++|+ ++|++++++.+.+.++|.+++|.+++.+.+..| ||+.|++.+++.++..++.++..
T Consensus       129 ~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~  207 (451)
T 1pw4_A          129 CGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMM  207 (451)
T ss_dssp             HHHHHHHTHHHHHHHHHTTCTT-THHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhhhccchHHHHHHHHCCc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999999999995 999999999999999999999999999988898 99999999999888777776666


Q ss_pred             cCCCCCCCC-------C------------Cc---h--hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075        172 QPGVVKQEV-------E------------PP---T--LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK  227 (414)
Q Consensus       172 ~~~~~~~~~-------~------------~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  227 (414)
                      +|++++.+.       +            +.   +  .++.+|+|.++...+..++..........++|.|+++.+|.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  287 (451)
T 1pw4_A          208 RDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL  287 (451)
T ss_dssp             CCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCH
T ss_pred             cCCHhhcCCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence            554332110       0            00   1  3567889999999888888888888999999999998889999


Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhh--hhHHHHHHHHHHHH-HHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhh
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRM--GRYLAALLGLLIIG-ICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSM  302 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~~~~~~-i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~  302 (414)
                      .+.++......++.+++.++.+++.||+  ++|+.+..+..+.. ++++++.+.+  +.+......++.|++.+...+..
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  367 (451)
T 1pw4_A          288 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLI  367 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHH
Confidence            9999999999999999999999999999  99888877776666 6666666553  44555556666676666554333


Q ss_pred             hhhhhhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        303 MPELGYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       303 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                         .....+..|++.||++.|+.+...++ |..++|.+.|.+.|..|++..|++.+++.+++.++.+..++
T Consensus       368 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  435 (451)
T 1pw4_A          368 ---GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI  435 (451)
T ss_dssp             ---HHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence               34567888899999999999999999 99999999999999999999999988888887777666543

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=100.00  E-value=1.6e-39  Score=309.52  Aligned_cols=342  Identities=14%  Similarity=0.079  Sum_probs=288.5

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHH
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFGRTYGVLFLARSLQ   93 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~   93 (414)
                      ..|.+.+++|.|+.++|++.+.+.+++.++++++|+++||+|||++++++.++.+++.+++   +++++++.+++.|++.
T Consensus        48 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  127 (438)
T 3o7q_A           48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFII  127 (438)
T ss_dssp             HHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999999999999999999999999999   8899999999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-hhcC------------------------
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-QFVG------------------------  148 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-~~~g------------------------  148 (414)
                      |++.+...+...+++.|++|+ ++|++++++.+.+.++|..++|.+++.+. +..+                        
T Consensus       128 G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (438)
T 3o7q_A          128 AAGLGCLETAANPFVTVLGPE-SSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVL  206 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCS-TTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred             HhhHHHhhhhHHHHHHHHcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhh
Confidence            999999999999999999994 99999999999999999999999999998 5554                        


Q ss_pred             -ChhHHHHHHHHHHHHHHHHHHhccCCCCCC--C--CC---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHH-H
Q psy14075        149 -KTAPFLILSALALGDGLLQLLLLQPGVVKQ--E--VE---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIW-M  219 (414)
Q Consensus       149 -w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  219 (414)
                       ||+.|++.+++.++..++.++...|+.+++  +  ++   +.++++++|+|.++...+..++..........++|.| +
T Consensus       207 ~w~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (438)
T 3o7q_A          207 SVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV  286 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCCCCTTTCCCCSSTTSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccchhhhHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence             999998888877776666555433322211  1  11   1356788999999998888888888888889999999 8


Q ss_pred             HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q psy14075        220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVD  299 (414)
Q Consensus       220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  299 (414)
                      ++.+|.++.+.+.......++.++++++.+++.||++||+.+..+..+..++++++.+.++.+. ....++.+++.+...
T Consensus       287 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~  365 (438)
T 3o7q_A          287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQY  365 (438)
T ss_dssp             HHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHTTHH
T ss_pred             hccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHH
Confidence            8888999999999999999999999999999999999999999999888888877777766544 334466777776665


Q ss_pred             hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHH
Q psy14075        300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAP  365 (414)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~  365 (414)
                      +...   ....+..|++ ++.+.++.. ...+|+.++|.+.|.+.|..| ++..|.+.+++.++..+
T Consensus       366 ~~~~---~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~  427 (438)
T 3o7q_A          366 PTIF---SLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI  427 (438)
T ss_dssp             HHHH---HHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHHH
T ss_pred             HHHH---HHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence            4433   3456777765 788888776 677999999999999999999 99888876655554433

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=100.00  E-value=1.1e-37  Score=290.83  Aligned_cols=334  Identities=19%  Similarity=0.191  Sum_probs=280.4

Q ss_pred             cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075         17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG   96 (414)
Q Consensus        17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~   96 (414)
                      ..|.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+++++++.+++.|+++|++
T Consensus        22 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~  101 (375)
T 2gfp_A           22 AIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMG  101 (375)
T ss_dssp             HHHHHHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075         97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV  176 (414)
Q Consensus        97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  176 (414)
                      .+...+...+++.|++|+ |+|++++++.+...++|..++|.+++.+.++.+||+.|++.++..++..+...+..||+++
T Consensus       102 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (375)
T 2gfp_A          102 TGVGGVMARTLPRDLYER-TQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRP  180 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHT-SSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCST
T ss_pred             HHhhhhhHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCC
Confidence            999999999999999994 9999999999999999999999999999998899999999998887776655555555443


Q ss_pred             CCC---CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh
Q psy14075        177 KQE---VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH  253 (414)
Q Consensus       177 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d  253 (414)
                      +++   +..+++++.+|+|+++...+..++..........+.|.|+++.+|.++.+.+.......++.+++.++.+++.|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~  260 (375)
T 2gfp_A          181 VDAPRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNK  260 (375)
T ss_dssp             TTCCCCCTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTT
T ss_pred             CCcccccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322   23345678889999999888888888888889999999999888999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHH-HHHHHHHhh--h--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHH
Q psy14075        254 RMGRYLAALLGLLI-IGICLMMIP--L--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVA  328 (414)
Q Consensus       254 ~~~~~~~~~~~~~~-~~i~~~~~~--~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  328 (414)
                      |.+++.  ..+... ...+...+.  .  .++.+......++.+++.+...+.....   ..|..| ++||++.|+.+..
T Consensus       261 r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~---~~~~~p-~~~g~~~g~~~~~  334 (375)
T 2gfp_A          261 RFSTLM--WQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSG---AMEPFP-FLAGTAGALVGGL  334 (375)
T ss_dssp             HHHHHH--HHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTHHH---HHTHHH-HHHHHHHHHHHHH
T ss_pred             HHHHHH--HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHHHH---HHHhCC-cccchHHHHHHHH
Confidence            998732  233332 222222211  2  1244555566777888888776655544   456666 7789999999999


Q ss_pred             HHHHHhHHHHHHHHHHhhhchHHHHHHHH
Q psy14075        329 FCLGFAIGPAMSGTLVNTIGFEWMLFIIA  357 (414)
Q Consensus       329 ~~~g~~ig~~~~g~l~~~~g~~~~~~~~~  357 (414)
                      .++|..++|.+.|.+.+..++...+.+.+
T Consensus       335 ~~~g~~~~~~~~g~l~~~~~~~~~~~~~~  363 (375)
T 2gfp_A          335 QNIGSGVLASLSAMLPQTGQGSLGLLMTL  363 (375)
T ss_dssp             HHHHHHCCSTTCTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcccHHHHHHH
Confidence            99999999999999998888887776643

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=100.00  E-value=7.4e-36  Score=288.52  Aligned_cols=345  Identities=13%  Similarity=0.106  Sum_probs=271.4

Q ss_pred             hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhh
Q psy14075         25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVS  103 (414)
Q Consensus        25 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~  103 (414)
                      +|.+..+.+++.+.+.++..++++++|+++|| +|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+.
T Consensus        49 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  128 (491)
T 4aps_A           49 LHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPN  128 (491)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccch
Confidence            99999999999999999999999999999999 89999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCcch--hhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCC---
Q psy14075        104 GMGMLAERYPDDRE--RGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQ---  178 (414)
Q Consensus       104 ~~~~i~~~~~~~~~--r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---  178 (414)
                      ..++++|++|+ ++  |++++++++...++|..++|.+++.+.++.|||+.|++.++..++..+..++..++..+++   
T Consensus       129 ~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (491)
T 4aps_A          129 VSTLVGTLYDE-HDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLR  207 (491)
T ss_dssp             HHHHHHHHSSS-CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSC
T ss_pred             HHHHHHHHcCc-ccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccccccC
Confidence            99999999995 78  7788999999999999999999999999999999999988877776665554433221111   


Q ss_pred             CCC--C-chhhh-----------------------------------------------------------hccChHHHH
Q psy14075        179 EVE--P-PTLKS-----------------------------------------------------------LVMDPYILI  196 (414)
Q Consensus       179 ~~~--~-~~~~~-----------------------------------------------------------~~~~~~~~~  196 (414)
                      +++  + ++.++                                                           ..+....+.
T Consensus       208 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (491)
T 4aps_A          208 PTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIP  287 (491)
T ss_dssp             CSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------CTTHHH
T ss_pred             CCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHH
Confidence            000  0 00000                                                           001112344


Q ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHH-----HHHHHHHHH
Q psy14075        197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAAL-----LGLLIIGIC  271 (414)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-----~~~~~~~i~  271 (414)
                      ..+...+....+.....++|.|.++..+.+..+.+.......+..+++.++.+++.||++||+...     .+..+.+++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~~~~~  367 (491)
T 4aps_A          288 LFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLS  367 (491)
T ss_dssp             HHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHH
Confidence            444555566667777888999999888888788899999999999999999999999999875543     677777777


Q ss_pred             HHHhhhhh---------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075        272 LMMIPLAR---------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT  342 (414)
Q Consensus       272 ~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~  342 (414)
                      ++++....         +.+......++.|++.+...+...   ....|..|++.||++.|+.+...++|..++|.+.+.
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~  444 (491)
T 4aps_A          368 FLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVGL---SVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTL  444 (491)
T ss_dssp             HTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHH---HHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHH---HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66665532         445556667777888777655443   356788899999999999999999999999999988


Q ss_pred             HHhhhchHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075        343 LVNTIGFEWMLFIIAILDFMYAPLLYLLRNPP  374 (414)
Q Consensus       343 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (414)
                      +.+ .++...|...+++.+++.++.+...++.
T Consensus       445 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (491)
T 4aps_A          445 YNA-KSEVAYFSYFGLGSVVLGIVLVFLSKRI  475 (491)
T ss_dssp             GGG-SSTTHHHHHTHHHHHHHHHHHHHC----
T ss_pred             Hhc-ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            766 4677788888877777776666655443

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=100.00  E-value=3.3e-33  Score=269.88  Aligned_cols=356  Identities=16%  Similarity=0.061  Sum_probs=255.2

Q ss_pred             cchhhhhhhcC--------CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH----------
Q psy14075         17 ARENRHKYLMG--------ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA----------   78 (414)
Q Consensus        17 ~~~~~~~~~g~--------s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~----------   78 (414)
                      ++|.+.++++.        ++++.|++.+.+.+|..++++++|+++||+|||+++.++.+++.++.++++          
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~  113 (491)
T 4gc0_A           34 TVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSIN  113 (491)
T ss_dssp             THHHHHHHHTGGGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSS
T ss_pred             HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence            45666666632        345789999999999999999999999999999999999999999999998          


Q ss_pred             --------hhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh----
Q psy14075         79 --------FGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF----  146 (414)
Q Consensus        79 --------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~----  146 (414)
                              +++|+++++++|+++|++.|...+....+++|+.|+ ++|++..+..+.+..+|.++++.++..+...    
T Consensus       114 ~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~-~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  192 (491)
T 4gc0_A          114 PDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPA-HIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDAS  192 (491)
T ss_dssp             SSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCG-GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred             chhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH-HhhhhhHHhhhhhhhhhhhhhhhcchhhccccccc
Confidence                    478999999999999999999999999999999995 9999999999999999999999888776543    


Q ss_pred             ----cCChhHHHHHHHHHHHHHHHHHHhccCCCCC----CCCC--C-----------------------------chhhh
Q psy14075        147 ----VGKTAPFLILSALALGDGLLQLLLLQPGVVK----QEVE--P-----------------------------PTLKS  187 (414)
Q Consensus       147 ----~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~-----------------------------~~~~~  187 (414)
                          .+||..+.+..+..++..+..+ ..||.++.    .+.+  .                             .....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (491)
T 4gc0_A          193 WLNTDGWRYMFASECIPALLFLMLLY-TVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLL  271 (491)
T ss_dssp             TTTTTHHHHHHHTTHHHHHHHHHHGG-GSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred             cccchhhHHHhhhhhhhhhhhhhhhh-cCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHH
Confidence                2477777777666665544444 44443310    0000  0                             00011


Q ss_pred             hccChHHHHHHHH-HHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075        188 LVMDPYILIAAGA-ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL  266 (414)
Q Consensus       188 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  266 (414)
                      .++.++....... .+........+..+.|.+.++ .+.+...........++..+++.++.+++.||+|||+.+..+..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~  350 (491)
T 4gc0_A          272 MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGAL  350 (491)
T ss_dssp             HSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHH
T ss_pred             HhcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHh-cCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchH
Confidence            2233333333333 333334445555566655544 67777777777778889999999999999999999999998888


Q ss_pred             HHHHHHHHhhhhh----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075        267 IIGICLMMIPLAR----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT  342 (414)
Q Consensus       267 ~~~i~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~  342 (414)
                      ...++++.+....    +........++...+++...  ......+..|.+|.+.|+++.|+.+...++++.+++.+.+.
T Consensus       351 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~  428 (491)
T 4gc0_A          351 GMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSW--GPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPM  428 (491)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTT--THHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHH--HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8887766654421    11222222333333333222  12223457799999999999999999999999999998887


Q ss_pred             HHhh------hchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075        343 LVNT------IGFEWMLFIIAILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       343 l~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (414)
                      +.+.      .+....|++.+++++++.+..+++.++.|.+
T Consensus       429 l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~  469 (491)
T 4gc0_A          429 MDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK  469 (491)
T ss_dssp             HCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTC
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCCC
Confidence            6543      3455677787887777777665544443433

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=100.00  E-value=7.9e-34  Score=268.41  Aligned_cols=351  Identities=14%  Similarity=0.162  Sum_probs=252.3

Q ss_pred             chh-hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHH---HHHHhhhhHH-HHHHHHHH
Q psy14075         18 REN-RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST---LIFAFGRTYG-VLFLARSL   92 (414)
Q Consensus        18 ~~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~---~~~~~~~~~~-~l~~~r~l   92 (414)
                      .|. +++++|.|+.+.|++.+.+.+++.++++++|+++||+||||+++++..+++++.   ....+++... .+...+.+
T Consensus        30 ~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (417)
T 2cfq_A           30 FPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIV  109 (417)
T ss_dssp             HHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHG
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344 456799999999999999999999999999999999999999999888776532   2223332221 23455666


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCC-cchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPD-DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      .|++.+...+.....+.++.++ .++|+...+......++|..++|.+++++.+ .+||+.|++.++..++..+..++.+
T Consensus       110 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~  188 (417)
T 2cfq_A          110 GGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAK  188 (417)
T ss_dssp             GGSSTTHHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSCSSC
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHcC
Confidence            6666665555544555555431 1356777888888899999999999999987 5899999988776555444444333


Q ss_pred             cCCCCC----C----CCCC---chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCC---CccchhhHhHHH
Q psy14075        172 QPGVVK----Q----EVEP---PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGA---DKWQQGVSFLPA  237 (414)
Q Consensus       172 ~~~~~~----~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~g~~~~~~  237 (414)
                      ||++++    +    ++++   .++++++|+|+++...+..+.....+..+..++|.|+.+.++.   +....+......
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  268 (417)
T 2cfq_A          189 TDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMG  268 (417)
T ss_dssp             CCCSCSSCSSSSSSSCCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHH
T ss_pred             cccccccccccccccccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHH
Confidence            333110    0    0111   2345678899888766665555555556666788888775542   234557777778


Q ss_pred             HHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc
Q psy14075        238 SISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV  317 (414)
Q Consensus       238 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  317 (414)
                      .++.+++.++.++++||++||+.+..+..+.+++.+.+.+.++.+...+..++.+++.+...+.   ...+..|..|++.
T Consensus       269 ~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~p~~~  345 (417)
T 2cfq_A          269 ELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVG---CFKYITSQFEVRF  345 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHH---HHHHHHHHSCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCHHH
Confidence            8888999999999999999999988888888887777666666555555555556555444332   2345778899999


Q ss_pred             hhhHHhH-HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        318 YGSVYAI-GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       318 ~g~~~g~-~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ||++.+. .+....+|+.++|.+.|++.|..|+...|.+.+++.+++.++.+...+
T Consensus       346 ~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~  401 (417)
T 2cfq_A          346 SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLS  401 (417)
T ss_dssp             HHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred             HHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999998 488889999999999999999889999998888888777766554443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.98  E-value=1.1e-30  Score=254.31  Aligned_cols=348  Identities=12%  Similarity=0.074  Sum_probs=238.2

Q ss_pred             hhhhhhc------CCcchHHHHHHHHHHHHHHhhhHHHHhhccc-CCchhHHHHHHHHHHHHHHHHhhh-hHHHHHHHHH
Q psy14075         20 NRHKYLM------GETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARS   91 (414)
Q Consensus        20 ~~~~~~g------~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~   91 (414)
                      .+.+++|      .++.+.|++.+.+.++..+++++.|+++||+ |||+++.++.++.+++.+++++++ +++.+++.|+
T Consensus        38 ~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (524)
T 2xut_A           38 FLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLF  117 (524)
T ss_dssp             HHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred             HHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence            3567788      9999999999999999999999999999999 999999999999999999999999 9999999999


Q ss_pred             HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHH---HHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHH
Q psy14075         92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGI---ALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQL  168 (414)
Q Consensus        92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~---~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~  168 (414)
                      +.|++.+...+...+++.|++|+ ++|+++.+.   .+...++|..++|.+++.+.+..|||+.|++.+++.++..+..+
T Consensus       118 l~g~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~  196 (524)
T 2xut_A          118 LIALGSGGIKPLVSSFMGDQFDQ-SNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFW  196 (524)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCST-TTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccccchhHHHHHHHHcCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999995 899776666   99999999999999999999989999999999888776655554


Q ss_pred             HhccCCCCCC--CCCCch--------------------------------------------------------------
Q psy14075        169 LLLQPGVVKQ--EVEPPT--------------------------------------------------------------  184 (414)
Q Consensus       169 ~~~~~~~~~~--~~~~~~--------------------------------------------------------------  184 (414)
                      +..++.++++  +++..+                                                              
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (524)
T 2xut_A          197 LGRKRYIHMPPEPKDPHGFLPVIRSALLTKVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGA  276 (524)
T ss_dssp             SSSSSCCCCC--------------------CTTHHHHHHHHHHHHHHHHHHTGGGTTTTCSSHHHHHHHHHHHHHHHTGG
T ss_pred             HhcccccccCCCCccchhHHHHHHHHHhhhhcccCccchhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhcccccch
Confidence            4332211100  000000                                                              


Q ss_pred             hh------------hhccChHHHHHHHHHH---HHHHHHHhhhhchHHHHHHHhCCCc-cchhhHhHHHHHHHHhhhhhh
Q psy14075        185 LK------------SLVMDPYILIAAGAIT---FANTGIAMLEPSLPIWMMDTMGADK-WQQGVSFLPASISYLIGTNLF  248 (414)
Q Consensus       185 ~~------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~-~~~g~~~~~~~~~~~~~~~~~  248 (414)
                      ++            +..+.++.+.......   +....+......++.+..+ .+.+. ...+.+.....++.+++..+.
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (524)
T 2xut_A          277 SLQLERARKSHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQAND-MVKPQWFEPAMMQALNPLLVMLLIPFN  355 (524)
T ss_dssp             GTHHHHSCCSCCSSSSTTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHH-SCCCSSSCHHHHHTTSGGGHHHHGGGT
T ss_pred             hhHHhhhhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHh-cCCCeeecHHHHHHHHHHHHHHhHHHH
Confidence            00            0001112211111111   1111111122223333222 22221 235556555566666666666


Q ss_pred             hhhh----hhhhh----HHHHHHHHHHHHHHHHHhhhhh---------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075        249 GPLG----HRMGR----YLAALLGLLIIGICLMMIPLAR---------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVD  311 (414)
Q Consensus       249 g~l~----d~~~~----~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  311 (414)
                      +++.    ||.++    ++.+..+..+.+++++++....         +.+......++.|++.+...+...   ....+
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~  432 (524)
T 2xut_A          356 NFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLTFGEVLVSATGL---EFAYS  432 (524)
T ss_dssp             TTC------------CCHHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHHHHHHHHHHHHT---TTHHH
T ss_pred             HhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence            6654    44432    3456677777778777766532         445556667778888777755444   34668


Q ss_pred             cccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh----------ch-HHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI----------GF-EWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       312 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~----------g~-~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      ..|++.||+++|+.+...++|+.++|.+.|.+.+..          +. ...|++.+++.+++.++.++..+
T Consensus       433 ~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (524)
T 2xut_A          433 QAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFAGFAILAAIVFALYAR  504 (524)
T ss_dssp             HCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             hCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence            888999999999999999999999999999998743          21 22366666666666555544433

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.73  E-value=8.2e-17  Score=153.16  Aligned_cols=176  Identities=14%  Similarity=0.114  Sum_probs=146.9

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC  271 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~  271 (414)
                      +.++...+..+........+...+|.+.++ + .+..+.+++.+...++..++.++.|+++||+|||+.+..+.++.+++
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~  105 (451)
T 1pw4_A           28 QIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV  105 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHH
Confidence            334445555555566666667777776665 6 89999999999999999999999999999999999999999999999


Q ss_pred             HHHhhh----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075        272 LMMIPL----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI  347 (414)
Q Consensus       272 ~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  347 (414)
                      .++..+    .++.+.+.+..++.|++.+...+....   .+.|..|+++|++++++.+....+|..++|.+.+++.+..
T Consensus       106 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~---~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~  182 (451)
T 1pw4_A          106 MLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR---TMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF  182 (451)
T ss_dssp             HHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHH---HHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHT
T ss_pred             HHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHH---HHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            998888    888888888899999998887655543   4678888899999999999999999999999999999999


Q ss_pred             c-hHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        348 G-FEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       348 g-~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                      | |++.|++.+++.++..++.++..+
T Consensus       183 g~w~~~f~~~~~~~~~~~~~~~~~~~  208 (451)
T 1pw4_A          183 NDWHAALYMPAFCAILVALFAFAMMR  208 (451)
T ss_dssp             CCSTTCTHHHHHHHHHHHHHHHHHCC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9 999999988887776665544433

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.71  E-value=3.2e-16  Score=150.86  Aligned_cols=176  Identities=13%  Similarity=0.087  Sum_probs=152.8

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHH-----hCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDT-----MGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLGL  265 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~  265 (414)
                      +.++...+..++..+.+.....+++.|+++.     +|.+..+.++..+...++..++.++.|+++|| +|||+.+..+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~   92 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGG   92 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Confidence            4566777777778888888889999999998     99999999999999999999999999999999 89999999999


Q ss_pred             HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc--hhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075        266 LIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV--YGSVYAIGDVAFCLGFAIGPAMSGTL  343 (414)
Q Consensus       266 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~ig~~~~g~l  343 (414)
                      ++..++.++..+.++.+.+.+..++.|++.+...+.....   +.|..|+++  |+.+.+..+...++|..++|.+.+.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  169 (491)
T 4aps_A           93 VLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTL---VGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAA  169 (491)
T ss_dssp             HHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHH---HHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccchHHHH---HHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988888888888888999999998876655544   667777777  77888889999999999999999999


Q ss_pred             HhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075        344 VNTIGFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      .+..||++.|++.++..+++.+..+..
T Consensus       170 ~~~~g~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          170 QEAAGYHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999877777766655544

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.70  E-value=9.9e-16  Score=145.14  Aligned_cols=175  Identities=13%  Similarity=0.166  Sum_probs=142.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075        194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM  273 (414)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~  273 (414)
                      +....+..+.............|.+ ++.+|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++.+++.+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~  106 (438)
T 3o7q_A           28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA  106 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            3344455555556666666777775 455899999999999999999999999999999999999999999999999988


Q ss_pred             Hh---hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH-hhhc-
Q psy14075        274 MI---PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV-NTIG-  348 (414)
Q Consensus       274 ~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~-~~~g-  348 (414)
                      +.   ...++.+.+.+..++.|++.+...+...+   ...|..|+++|+++.++.+....+|..++|.+.+.+. +..+ 
T Consensus       107 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~---~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~  183 (438)
T 3o7q_A          107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANP---FVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPH  183 (438)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCC
T ss_pred             HHHhccccccHHHHHHHHHHHHhhHHHhhhhHHH---HHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            88   67788888888999999999888665543   4678888999999999999999999999999999998 5444 


Q ss_pred             ------------------------hHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075        349 ------------------------FEWMLFIIAILDFMYAPLLYLLRN  372 (414)
Q Consensus       349 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~  372 (414)
                                              |++.|.+.+....+..++.++.+.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~  231 (438)
T 3o7q_A          184 QSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKF  231 (438)
T ss_dssp             CCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             ccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                                    888887777666665555544433

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.65  E-value=2.8e-15  Score=145.49  Aligned_cols=176  Identities=13%  Similarity=0.063  Sum_probs=148.5

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhC------CCccchhhHhHHHHHHHHhhhhhhhhhhhhh-hhHHHHHHH
Q psy14075        192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMG------ADKWQQGVSFLPASISYLIGTNLFGPLGHRM-GRYLAALLG  264 (414)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~  264 (414)
                      |.++...+..++..+.++....+++.|+++.+|      .++.+.++..+...++..++.++.|+++||+ |||+.+..+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~   91 (524)
T 2xut_A           12 RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWL   91 (524)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence            455666777777778888888999999998889      9999999999999999999999999999999 999999999


Q ss_pred             HHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhH---HHHHHHHHHhHHHHHH
Q psy14075        265 LLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAI---GDVAFCLGFAIGPAMS  340 (414)
Q Consensus       265 ~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~---~~~~~~~g~~ig~~~~  340 (414)
                      .++..++.++..+.+ +.+.+.+..++.|++.+...+....   ...|..|+++|+++.+.   .+...++|..++|.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~  168 (524)
T 2xut_A           92 SLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSS---FMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSM  168 (524)
T ss_dssp             HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHH---HHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHH---HHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988888887 8888888888889998887655544   46677888888766555   8889999999999999


Q ss_pred             HHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075        341 GTLVNTIGFEWMLFIIAILDFMYAPLLYLL  370 (414)
Q Consensus       341 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  370 (414)
                      +.+.+..||+..|.+.+++.++..+..+..
T Consensus       169 ~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~  198 (524)
T 2xut_A          169 PLLLKNFGAAVAFGIPGVLMFVATVFFWLG  198 (524)
T ss_dssp             THHHHTSCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHhccccHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998888777665555443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.63  E-value=2e-15  Score=140.06  Aligned_cols=166  Identities=12%  Similarity=0.171  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075        196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI  275 (414)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~  275 (414)
                      ...+..++...........+|.+.+ ++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~   82 (375)
T 2gfp_A            4 MLVLLVAVGQMAQTIYIPAIADMAR-DLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVA   82 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHT-TSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence            3445556666666677777787654 489999999999999999999999999999999999999999999999999988


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075        276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFI  355 (414)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~  355 (414)
                      .+.++.+.+.+..++.|++.+...+.....   ..|..|+++|+++++..+....+|..++|.+.+.+.+..||+..|.+
T Consensus        83 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~  159 (375)
T 2gfp_A           83 VTTSSLTVLIAASAMQGMGTGVGGVMARTL---PRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLF  159 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHHHHHHHHhhhhhHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHH
Confidence            888888888888889999988776655544   56777788899999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHH
Q psy14075        356 IAILDFMYAP  365 (414)
Q Consensus       356 ~~~~~~~~~~  365 (414)
                      .++..++..+
T Consensus       160 ~~~~~~~~~~  169 (375)
T 2gfp_A          160 LLVLCAGVTF  169 (375)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHH
Confidence            8777666554

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.43  E-value=4.6e-13  Score=126.06  Aligned_cols=145  Identities=15%  Similarity=0.181  Sum_probs=124.8

Q ss_pred             cchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHH
Q psy14075         29 TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGML  108 (414)
Q Consensus        29 ~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i  108 (414)
                      ..+.+++.+...++..++.++.|++.||+|||+++..+.++.+++.++.++.++.+.+++..++.+++.+...+....++
T Consensus       258 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  337 (417)
T 2cfq_A          258 TRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYI  337 (417)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44567888888888899999999999999999999999999988888888888888888888888888777777778899


Q ss_pred             hhcCCCcchhhHHHHH-HHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075        109 AERYPDDRERGNAMGI-ALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG  174 (414)
Q Consensus       109 ~~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~  174 (414)
                      +|.+| ++.|+++.+. ++....+|..++|.+++.+.+..|++..|.+.+++.++..+..++..+++
T Consensus       338 ~~~~p-~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~  403 (417)
T 2cfq_A          338 TSQFE-VRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGP  403 (417)
T ss_dssp             HHHSC-HHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSCCS
T ss_pred             HHHCC-HHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            99999 4999999999 48888999999999999999988899999998888888777666555543

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.32  E-value=5.3e-12  Score=121.27  Aligned_cols=142  Identities=18%  Similarity=0.248  Sum_probs=110.1

Q ss_pred             cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh------------------hhhhhHHHHHHHH
Q psy14075        228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP------------------LARNINHLIVPNA  289 (414)
Q Consensus       228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~------------------~~~~~~~~~~~~~  289 (414)
                      .+.|+..+...++.++|.++.|+++||+|||+.+.++.++..++.++..                  .+++.+.+++.-+
T Consensus        55 ~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~  134 (491)
T 4gc0_A           55 SLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRI  134 (491)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHH
Confidence            3457788888899999999999999999999999999999988877665                  3667888899999


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh--------chHHHHHHHHHHHH
Q psy14075        290 GLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI--------GFEWMLFIIAILDF  361 (414)
Q Consensus       290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~--------g~~~~~~~~~~~~~  361 (414)
                      +.|++.|...+...   .++.|..|++.|++..+..+....+|..+++.+...+.+..        +|+..+.......+
T Consensus       135 l~G~g~G~~~~~~~---~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (491)
T 4gc0_A          135 IGGIGVGLASMLSP---MYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPAL  211 (491)
T ss_dssp             HHHHHHHHHHHHHH---HHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHHHHH---HHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhh
Confidence            99999998865544   45779999999999999999988888888888776665432        35555555555555


Q ss_pred             HHHHHHHHhcC
Q psy14075        362 MYAPLLYLLRN  372 (414)
Q Consensus       362 ~~~~~~~~~~~  372 (414)
                      +..+..+..++
T Consensus       212 ~~~~~~~~~pe  222 (491)
T 4gc0_A          212 LFLMLLYTVPE  222 (491)
T ss_dssp             HHHHHGGGSCC
T ss_pred             hhhhhhhcCCC
Confidence            44444444444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	414
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	6e-14
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	2e-06
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	4e-06
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	2e-12
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	7e-05

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 70.6 bits (171), Expect = 6e-14
 Identities = 45/362 (12%), Positives = 101/362 (27%), Gaps = 20/362 (5%)

Query: 31  AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR 90
             G++F + +   LL  PL G+L+ ++G    +      M +    F       +L    
Sbjct: 44  DTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNI 103

Query: 91  SLQGI-----GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ 145
            +  I        C +     + A      R      G A     +G  +G    GIM+ 
Sbjct: 104 LVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT 163

Query: 146 FVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKS-------------LVMDP 192
              +   +L      +   LL                                       
Sbjct: 164 INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLW 223

Query: 193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG 252
           ++ +    ++           +       T        G       +           + 
Sbjct: 224 FLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLII 283

Query: 253 HRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDI 312
           +R+G   A LL   I+ + ++    A +   +++      F +  +       +    ++
Sbjct: 284 NRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEV 343

Query: 313 RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372
           R +A    V         L       ++G +  +IGF+    ++ ++   +  +     +
Sbjct: 344 RFSATIYLVCFC--FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLS 401

Query: 373 PP 374
            P
Sbjct: 402 GP 403

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 47.5 bits (111), Expect = 2e-06
 Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 2/154 (1%)

Query: 20  NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF 79
           +        T+  G +      +         ++ +R+G    +     IM +  +  +F
Sbjct: 249 SFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSF 308

Query: 80  GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALG-GLALGVLIGPP 138
             +   + + ++L         V     +  ++   R       +       L ++    
Sbjct: 309 ATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEV-RFSATIYLVCFCFFKQLAMIFMSV 367

Query: 139 FGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172
             G MY+ +G    +L+L  +ALG  L+ +  L 
Sbjct: 368 LAGNMYESIGFQGAYLVLGLVALGFTLISVFTLS 401

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 46.3 bits (108), Expect = 4e-06
 Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 3/193 (1%)

Query: 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGP 250
           +    +      F    +    P  PIW+ D     K   G+ F   S+  L+   LFG 
Sbjct: 6   NTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGL 65

Query: 251 LGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLV 310
           L  ++G     L  +  + +      +      L           G+            V
Sbjct: 66  LSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAV 125

Query: 311 DIRHTAVY---GSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL 367
           +     V       +    +  C+G+A+G ++ G +                  +   L 
Sbjct: 126 EAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLF 185

Query: 368 YLLRNPPTKEEKK 380
           +   + P+     
Sbjct: 186 FAKTDAPSSATVA 198

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 66.2 bits (160), Expect = 2e-12
 Identities = 41/390 (10%), Positives = 114/390 (29%), Gaps = 39/390 (10%)

Query: 32  VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF----AFGRTYGVLF 87
           +G      +     +  ++G ++ R    + +  G ++     L          +  V+F
Sbjct: 61  LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMF 120

Query: 88  LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV 147
           +   L G             +   +     RG  + +      +G  I P    +   + 
Sbjct: 121 VLLFLCGWFQGMGWPPCGRTMVHWWSQKE-RGGIVSVWNCAHNVGGGIPPLLFLLGMAWF 179

Query: 148 GKTAPFLILSALALGDGLLQLLLLQP-------------------------GVVKQEVEP 182
                 L + A       L    +                              +   + 
Sbjct: 180 NDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQ 239

Query: 183 PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYL 242
             ++ ++ +  +   A A  F       +    P ++ +       +   ++     + +
Sbjct: 240 IFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGI 299

Query: 243 IGTNLFGPLGHRMGRY-----LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGM 297
            GT L G +  ++ R          + L+ I   +  +  A N    ++    +GF I  
Sbjct: 300 PGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYG 359

Query: 298 VDSSMMPELGYLVDIRHTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTIGFEWMLFII 356
               +     + +++      G+         +  G     A+ G  V+  G++    ++
Sbjct: 360 PVMLIGL---HALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM 416

Query: 357 AILDFMYAPLLYLLRNPPTKEEKKVGRQTL 386
                +   LL ++     +  +++ ++ +
Sbjct: 417 IGGSILAVILLIVVMIGEKRRHEQLLQELV 446

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 42.4 bits (98), Expect = 7e-05
 Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 1/211 (0%)

Query: 193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG 252
           + +       +A   +     +L +  +   G  +   G +    SI+Y     + G + 
Sbjct: 24  WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVS 83

Query: 253 HRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGM-VDSSMMPELGYLVD 311
            R    +    GL++    ++ +         I     L F  G        P    +V 
Sbjct: 84  DRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVH 143

Query: 312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371
                  G + ++ + A  +G  I P +    +           +     +   L     
Sbjct: 144 WWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAM 203

Query: 372 NPPTKEEKKVGRQTLINEKSSTLINEKSSVR 402
              T +   +              NEK+   
Sbjct: 204 MRDTPQSCGLPPIEEYKNDYPDDYNEKAEQE 234

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	414
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	100.0
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.97
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.68
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.58

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-38  Score=302.04  Aligned_cols=355  Identities=12%  Similarity=0.058  Sum_probs=283.2

Q ss_pred             chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHH
Q psy14075         18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVLFLARSLQ   93 (414)
Q Consensus        18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~   93 (414)
                      .|.+ +|+|.|++|+|++.+++.+++.++++++|+++||+|||+++.++.++.+++.+++++++    +++.+++.|++.
T Consensus        48 ~p~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (447)
T d1pw4a_          48 MPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLC  126 (447)
T ss_dssp             HHHT-TSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHH
T ss_pred             HHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHH
Confidence            4544 46899999999999999999999999999999999999999999999999999988764    678999999999


Q ss_pred             hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075         94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLLQLLLLQ  172 (414)
Q Consensus        94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~  172 (414)
                      |++.+...+...+++.|++|+ ++|++++++.+.+..+|..+++.+++.+.+. .+||+.|++.+++.++..++.+...+
T Consensus       127 g~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~  205 (447)
T d1pw4a_         127 GWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMR  205 (447)
T ss_dssp             HHHHHHTHHHHHHHHHTTCTT-THHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCC
T ss_pred             HHhhhhhhhHHHHHHHHHHHh-hcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcc
Confidence            999999999999999999995 9999999999999999999999999887765 47999999999998888887777765


Q ss_pred             CCCCCCCCC------------------------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc
Q psy14075        173 PGVVKQEVE------------------------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW  228 (414)
Q Consensus       173 ~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  228 (414)
                      +++++.+..                        +...++.+++|.++......++..........+.|.|+.+.++.+..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (447)
T d1pw4a_         206 DTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD  285 (447)
T ss_dssp             CSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHH
T ss_pred             cchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccc
Confidence            543221100                        01234577889999888888888888888999999999998999999


Q ss_pred             chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHH---HHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075        229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALL---GLLIIGICLMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMM  303 (414)
Q Consensus       229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~---~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~  303 (414)
                      +.+.......+..+++.++.|++.||.+|++....   ...+..++.+....  ..+.+...+..++.|++.+...+.. 
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-  364 (447)
T d1pw4a_         286 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLI-  364 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHH-
T ss_pred             hhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH-
Confidence            99999999999999999999999999986543222   22222222222222  2344445555566666655543332 


Q ss_pred             hhhhhhhhcccccchhhHHhHHHHHHHHH-HhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075        304 PELGYLVDIRHTAVYGSVYAIGDVAFCLG-FAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE  377 (414)
Q Consensus       304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g-~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (414)
                        .....|..|++.||++.|+.+...+++ ..++|.+.|++.|.+|++..|.+.+++.+++.++...+.++++++
T Consensus       365 --~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  437 (447)
T d1pw4a_         365 --GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRR  437 (447)
T ss_dssp             --HHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence              334668889999999999999888874 567899999999999999999888888777777666555443333

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=4.1e-30  Score=238.96  Aligned_cols=354  Identities=14%  Similarity=0.138  Sum_probs=256.8

Q ss_pred             chh-hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHH----HHHHHH
Q psy14075         18 REN-RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVL----FLARSL   92 (414)
Q Consensus        18 ~~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l----~~~r~l   92 (414)
                      .|. +++++|.|++++|++.+++.+++.++++++|+++||+||||+++++..+..++..+..+..+....    ++.+.+
T Consensus        30 l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (417)
T d1pv7a_          30 FPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIV  109 (417)
T ss_dssp             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence            344 567799999999999999999999999999999999999999999999999999888887665544    445555


Q ss_pred             HhhhhhhhhhhHHHHHhhcCCC-cchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075         93 QGIGSSCSSVSGMGMLAERYPD-DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL  171 (414)
Q Consensus        93 ~G~~~~~~~~~~~~~i~~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~  171 (414)
                      .+.+.+...........+..++ ++++.+..+........+..+++.+++.+.+. +|+..+........+..+...+..
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~  188 (417)
T d1pv7a_         110 GGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAK  188 (417)
T ss_dssp             TTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             hhhcccccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHh
Confidence            5555555544444444333321 23456677888888999999999999988874 566666666666666666666555


Q ss_pred             cCCCCCCCCCC-----------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHH---HhCCCccchhhHhHHH
Q psy14075        172 QPGVVKQEVEP-----------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMD---TMGADKWQQGVSFLPA  237 (414)
Q Consensus       172 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~g~~~~~~  237 (414)
                      +++++++++++           ....+..+++..+....................+.+...   ..+.+....+......
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (417)
T d1pv7a_         189 TDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMG  268 (417)
T ss_dssp             CCSCSSSCSSHHHHSCCCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhcccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhccccccc
Confidence            54433222111           112333444444444333333333333333333333222   1233444566777788


Q ss_pred             HHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc
Q psy14075        238 SISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV  317 (414)
Q Consensus       238 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  317 (414)
                      .++..++..+.+++.||.++++.+..+..+.+++.+.+.+.++.+...+..++.|++.+...+...   +...|..|++.
T Consensus       269 ~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~~~~~~  345 (417)
T d1pv7a_         269 ELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCF---KYITSQFEVRF  345 (417)
T ss_dssp             HHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHSCGGG
T ss_pred             ccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHH---HHHHHHCCHhH
Confidence            888999999999999999999999999999999999888888888888888888998888765544   34678888999


Q ss_pred             hhhHHhHH-HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q psy14075        318 YGSVYAIG-DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPT  375 (414)
Q Consensus       318 ~g~~~g~~-~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (414)
                      |+++.|+. +....+|..++|.+.|++.|..|++..|.+.+++.++..++..+..++++
T Consensus       346 ~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~  404 (417)
T d1pv7a_         346 SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPG  404 (417)
T ss_dssp             HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            99999985 45677999999999999999999999999988888877776666555443

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=6.1e-16  Score=144.44  Aligned_cols=159  Identities=15%  Similarity=0.211  Sum_probs=128.6

Q ss_pred             hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh----hhHHHHHH
Q psy14075        212 EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR----NINHLIVP  287 (414)
Q Consensus       212 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~  287 (414)
                      ....| +++| +|.|..+.|+..+...++..++.++.|+++||+|||+.+..+.++.+++.++..+.+    +.+...+.
T Consensus        45 ~~~~p-~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (447)
T d1pw4a_          45 ALAMP-YLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL  122 (447)
T ss_dssp             HHHHH-HTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHH
T ss_pred             HHHHH-HHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHH
Confidence            33344 4555 799999999999999999999999999999999999999999999988887776643    45667777


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHH
Q psy14075        288 NAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-GFEWMLFIIAILDFMYAPL  366 (414)
Q Consensus       288 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~  366 (414)
                      .++.|++.+...+...   ....|..|+++|++++++.+....+|..++|.+.+.+.+.. +|++.|++.+.+.++..++
T Consensus       123 ~~~~g~~~~~~~~~~~---~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  199 (447)
T d1pw4a_         123 LFLCGWFQGMGWPPCG---RTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALF  199 (447)
T ss_dssp             HHHHHHHHHHTHHHHH---HHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhhhhHHH---HHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHH
Confidence            7888888877755444   34678888999999999999999999999999999887765 5888888887777776666


Q ss_pred             HHHhcCCCc
Q psy14075        367 LYLLRNPPT  375 (414)
Q Consensus       367 ~~~~~~~~~  375 (414)
                      .+...++.+
T Consensus       200 ~~~~~~~~~  208 (447)
T d1pw4a_         200 AFAMMRDTP  208 (447)
T ss_dssp             HHHHCCCSS
T ss_pred             HHHhcccch
Confidence            665554443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=1.2e-14  Score=133.32  Aligned_cols=185  Identities=14%  Similarity=0.083  Sum_probs=124.6

Q ss_pred             hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075        187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL  266 (414)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~  266 (414)
                      +.+|||++|.+.+..++..+.......++|.|+++.+|.|+.+.|++.+...++..++.++.|+++||+|||+.+..+..
T Consensus         2 ~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~   81 (417)
T d1pv7a_           2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIIT   81 (417)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHH
T ss_pred             CcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence            35799999999999999988888888999999999899999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhh-hhhhhhhhc--ccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075        267 IIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMM-PELGYLVDI--RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL  343 (414)
Q Consensus       267 ~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~--~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l  343 (414)
                      ...++........+........++.....+....... +......+.  ...+.+....+........+..++|.+.+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  161 (417)
T d1pv7a_          82 GMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIM  161 (417)
T ss_dssp             HHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhcccccccccccccc
Confidence            8887777666654433322222222222111111111 111111111  1122335566667777788899999999988


Q ss_pred             HhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075        344 VNTIGFEWMLFIIAILDFMYAPLLYLLR  371 (414)
Q Consensus       344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~  371 (414)
                      .+..++...+.......+...+..+..+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (417)
T d1pv7a_         162 FTINNQFVFWLGSGCALILAVLLFFAKT  189 (417)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             ccccccccccchhhHHHHHHHHHHHHhc
Confidence            8754444444443333333333333333