Psyllid ID: psy14123

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MLYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPNLKTPLCLTPLLKNGFTYQLLN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHHHHHHHccccHHccHHHHHHcHHHccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcc
Coil and Loop (DISEMBL)
MLYLLVFSIVLKPRPYLFILLVYFSENLnefahnnwrsfarheyfdekGMFISIVFSIPLLLNCMILVLKRkytckepypnlktplcltpllkngftyqlln
Flexible Loop (DISEMBL)
MLYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPypnlktplcltpllkNGFTYQLLN
Low Complexity Region (SEG)
MLYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPnlktplcltpllknGFTYQLLN
Disordered region (IsUnstruct)
*LYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPNLKTPLCLTPLLKNGFTYQL**
Disordered Region (DISOPRED)
MLYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPNLKTPLCLTPLLKNGFTYQLLN
Disordered Region (DISEMBL)
MLYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPNLKTPLCLTPLLKNGFTYQLLN
Disordered Region (DISPRO)
MLYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPNLKTPLCLTPLLKNGFTYQLLN
Transmembrane Helix (TMHMM)
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLYLLVFSIVLKPRPYLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPNLKTPLCLTPLLKNGFTYQLLN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q641M3	152	Transmembrane protein 18	yes	N/A	0.509	0.342	0.596	3e-12
Q96B42	140	Transmembrane protein 18	yes	N/A	0.637	0.464	0.492	6e-12
Q3SZ36	139	Transmembrane protein 18	yes	N/A	0.5	0.366	0.568	9e-12
Q6DGF8	140	Transmembrane protein 18	yes	N/A	0.637	0.464	0.470	1e-11
Q5F410	142	Transmembrane protein 18	yes	N/A	0.647	0.464	0.484	3e-11
Q3TUD9	140	Transmembrane protein 18	yes	N/A	0.5	0.364	0.549	3e-11
Q28GF5	136	Transmembrane protein 18	yes	N/A	0.666	0.5	0.455	2e-10
Q4V7N7	136	Transmembrane protein 18	N/A	N/A	0.666	0.5	0.441	4e-10

>sp|Q641M3|TMM18_DANRE Transmembrane protein 18 OS=Danio rerio GN=tmem18 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 42/52 (80%)

Query: 17  LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILV 68
           L + +VY +E LNE A  NWRSF++ +YFD KGMFIS+V+S+PLLLN +I+V
Sbjct: 69  LMVAMVYSAEYLNELAAMNWRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIV 120

Danio rerio (taxid: 7955)

>sp|Q96B42|TMM18_HUMAN Transmembrane protein 18 OS=Homo sapiens GN=TMEM18 PE=1 SV=2

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 46/65 (70%)

Query: 19  ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEP 78
           ++LVY +E +NE A  NWR F++++YFD +GMFISIVFS PLL+N MI+V+   +     
Sbjct: 60  VILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNV 119

Query: 79  YPNLK 83
             +LK
Sbjct: 120 MTDLK 124

Transcription repressor. Sequence-specific ssDNA and dsDNA binding protein, with preference for GCT end CTG repeats. Cell migration modulator which enhances the glioma-specific migration ability of neural stem cells (NSC) and neural precursor cells (NPC).

Homo sapiens (taxid: 9606)

>sp|Q3SZ36|TMM18_BOVIN Transmembrane protein 18 OS=Bos taurus GN=TMEM18 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 41/51 (80%)

Query: 19  ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVL 69
           + LVY +E +NE A  NWR F++H+YFD +GMFIS+VFS PLLLN +++V+
Sbjct: 60  VTLVYCAEYINEVAAMNWRLFSKHQYFDSRGMFISLVFSAPLLLNALVIVV 110

Transcription repressor. Sequence-specific ssDNA and dsDNA binding protein, with preference for GCT end CTG repeats. Cell migration modulator which enhances the glioma-specific migration ability of neural stem cells (NSC) and neural precursor cells (NPC).

Bos taurus (taxid: 9913)

>sp|Q6DGF8|TMM18_RAT Transmembrane protein 18 OS=Rattus norvegicus GN=Tmem18 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 3/68 (4%)

Query: 19  ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVL---KRKYTC 75
           ++LVY +E +NE A  NWR FA+++YFD +GMFIS+VFS PLL N M++V+   ++  T 
Sbjct: 60  VVLVYCAEYINEVAAMNWRLFAKYQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTV 119

Query: 76  KEPYPNLK 83
                NL+
Sbjct: 120 MSDLKNLQ 127

Transcription repressor. Sequence-specific ssDNA and dsDNA binding protein, with preference for GCT end CTG repeats (By similarity). Cell migration modulator which enhances the glioma-specific migration ability of neural stem cells (NSC) and neural precursor cells (NPC).

Rattus norvegicus (taxid: 10116)

>sp|Q5F410|TMM18_CHICK Transmembrane protein 18 OS=Gallus gallus GN=TMEM18 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 45/66 (68%)

Query: 19  ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEP 78
           + LVY +E +NE A  NWR F++++YFD +GMFIS+VFS PLL+N +I+V+   Y     
Sbjct: 64  VCLVYCAEYINELAAMNWRLFSKYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVYRTLNV 123

Query: 79  YPNLKT 84
              LKT
Sbjct: 124 MTELKT 129

Gallus gallus (taxid: 9031)

>sp|Q3TUD9|TMM18_MOUSE Transmembrane protein 18 OS=Mus musculus GN=Tmem18 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 41/51 (80%)

Query: 19  ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVL 69
           ++LVY +E +NE A  NWR F++++YFD +GMFIS+VFS PLL N M++V+
Sbjct: 60  VVLVYSAEYINEVAAVNWRLFSKYQYFDSRGMFISLVFSAPLLFNAMLIVI 110

Transcription repressor. Sequence-specific ssDNA and dsDNA binding protein, with preference for GCT end CTG repeats. Cell migration modulator which enhances the glioma-specific migration ability of neural stem cells (NSC) and neural precursor cells (NPC).

Mus musculus (taxid: 10090)

>sp|Q28GF5|TMM18_XENTR Transmembrane protein 18 OS=Xenopus tropicalis GN=tmem18 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 17  LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCK 76
           L ++LV  +E +NEFA  +WRS+++ +YFD  GMFIS+ FS PLL N +I+V+   Y   
Sbjct: 53  LMVVLVSCAEYINEFAAMHWRSYSKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTL 112

Query: 77  EPYPNLKT 84
                LKT
Sbjct: 113 CVMTELKT 120

Xenopus tropicalis (taxid: 8364)

>sp|Q4V7N7|TMM18_XENLA Transmembrane protein 18 OS=Xenopus laevis GN=tmem18 PE=2 SV=1

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 44/68 (64%)

Query: 17  LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCK 76
           L ++LV  +E +NEFA  +WR++++ +YFD  GMFIS+ FS PLL N +I+V+   Y   
Sbjct: 53  LMVVLVSCAEYINEFAAMHWRAYSKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTL 112

Query: 77  EPYPNLKT 84
                LKT
Sbjct: 113 CVMTELKT 120

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
157131658	148	hypothetical protein AaeL_AAEL012169 [Ae	0.686	0.472	0.514	1e-14
241063666	157	transmembrane protein, putative [Ixodes	0.558	0.363	0.631	3e-14
195431413	158	GK15828 [Drosophila willistoni] gi|19415	0.676	0.436	0.507	3e-14
195333774	151	GM21391 [Drosophila sechellia] gi|195582	0.676	0.456	0.521	7e-14
346467907	155	hypothetical protein [Amblyomma maculatu	0.558	0.367	0.596	8e-14
221330192	151	CG30051 [Drosophila melanogaster] gi|220	0.627	0.423	0.562	8e-14
66771421	160	IP06878p [Drosophila melanogaster]	0.627	0.4	0.562	8e-14
66771595	184	IP07178p [Drosophila melanogaster]	0.627	0.347	0.562	1e-13
226423958	184	FI06446p [Drosophila melanogaster]	0.627	0.347	0.562	1e-13
195119636	156	GI19670 [Drosophila mojavensis] gi|19390	0.833	0.544	0.446	1e-13

>gi|157131658|ref|XP_001655911.1| hypothetical protein AaeL_AAEL012169 [Aedes aegypti] gi|94469328|gb|ABF18513.1| predicted membrane protein [Aedes aegypti] gi|108871451|gb|EAT35676.1| AAEL012169-PA [Aedes aegypti]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 53/70 (75%)

Query: 16  YLFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTC 75
           ++ +L+VYFSE++NE+A  NWR F++ +YFD+KG+FISIVFS+P+LLNCM++V    Y  
Sbjct: 58  FVLLLMVYFSESINEYAAVNWRIFSKQQYFDDKGLFISIVFSVPILLNCMLMVGSWLYQS 117

Query: 76  KEPYPNLKTP 85
            +    LKT 
Sbjct: 118 TQLMARLKTA 127

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241063666|ref|XP_002408197.1| transmembrane protein, putative [Ixodes scapularis] gi|215492399|gb|EEC02040.1| transmembrane protein, putative [Ixodes scapularis] gi|442746821|gb|JAA65570.1| Putative transmembrane protein [Ixodes ricinus]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 46/57 (80%)

Query: 19  ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTC 75
           +LLVYFSE LNE A  +WRSF+ H+YFD +GMFIS+VFS PLLLNC+I+V +  +T 
Sbjct: 64  LLLVYFSEALNELAAQHWRSFSSHQYFDSQGMFISLVFSAPLLLNCIIMVGQWMWTS 120

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195431413|ref|XP_002063736.1| GK15828 [Drosophila willistoni] gi|194159821|gb|EDW74722.1| GK15828 [Drosophila willistoni]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 49/69 (71%)

Query: 17  LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCK 76
           + +L VYFSE +NE+A  NW++F++ +YFD  G+FIS VFSIP+LLNCM L+    Y+  
Sbjct: 58  VLLLAVYFSEGINEYAATNWKTFSKQQYFDSNGLFISTVFSIPILLNCMFLIGTWLYSST 117

Query: 77  EPYPNLKTP 85
           +   NLKT 
Sbjct: 118 QLMANLKTA 126

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195333774|ref|XP_002033561.1| GM21391 [Drosophila sechellia] gi|195582757|ref|XP_002081192.1| GD10887 [Drosophila simulans] gi|194125531|gb|EDW47574.1| GM21391 [Drosophila sechellia] gi|194193201|gb|EDX06777.1| GD10887 [Drosophila simulans]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 49/69 (71%)

Query: 17  LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCK 76
           + +L VYF+E++NEFA +NW SF+R +YFD  G+FIS VFSIP+LLNCM+L+    Y   
Sbjct: 58  ILLLAVYFTESINEFAAHNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNST 117

Query: 77  EPYPNLKTP 85
           +    LKT 
Sbjct: 118 QLMVTLKTA 126

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346467907|gb|AEO33798.1| hypothetical protein [Amblyomma maculatum]

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 46/57 (80%)

Query: 19  ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTC 75
           +LLVYFSE LNE A  +W++F+ H+YFD +GMFIS+VFS PLLLNC+I+V +  +T 
Sbjct: 66  LLLVYFSEALNELAAQHWQAFSSHQYFDSQGMFISLVFSAPLLLNCIIMVXQWMWTS 122

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221330192|ref|NP_725169.3| CG30051 [Drosophila melanogaster] gi|220902189|gb|AAM68685.3| CG30051 [Drosophila melanogaster]

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 46/64 (71%)

Query: 22  VYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPN 81
           VYF+E++NEFA NNW SF+R +YFD  G+FIS VFSIP+LLNCM+L+    Y   +    
Sbjct: 63  VYFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVT 122

Query: 82  LKTP 85
           LKT 
Sbjct: 123 LKTA 126

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66771421|gb|AAY55022.1| IP06878p [Drosophila melanogaster]

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 46/64 (71%)

Query: 22  VYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPN 81
           VYF+E++NEFA NNW SF+R +YFD  G+FIS VFSIP+LLNCM+L+    Y   +    
Sbjct: 72  VYFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVT 131

Query: 82  LKTP 85
           LKT 
Sbjct: 132 LKTA 135

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66771595|gb|AAY55109.1| IP07178p [Drosophila melanogaster]

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 46/64 (71%)

Query: 22  VYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPN 81
           VYF+E++NEFA NNW SF+R +YFD  G+FIS VFSIP+LLNCM+L+    Y   +    
Sbjct: 96  VYFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVT 155

Query: 82  LKTP 85
           LKT 
Sbjct: 156 LKTA 159

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|226423958|gb|ACO53084.1| FI06446p [Drosophila melanogaster]

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 46/64 (71%)

Query: 22  VYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYTCKEPYPN 81
           VYF+E++NEFA NNW SF+R +YFD  G+FIS VFSIP+LLNCM+L+    Y   +    
Sbjct: 96  VYFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLIGTWLYNSTQLMVT 155

Query: 82  LKTP 85
           LKT 
Sbjct: 156 LKTA 159

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195119636|ref|XP_002004336.1| GI19670 [Drosophila mojavensis] gi|193909404|gb|EDW08271.1| GI19670 [Drosophila mojavensis]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 9/94 (9%)

Query: 1   MLYLLVFSIVLKPRPY------LFILL---VYFSENLNEFAHNNWRSFARHEYFDEKGMF 51
           +L++L  S  L  R Y      LF++L   VYFSE++NE+A  NW++F++ +YFD  G+F
Sbjct: 33  LLHVLTTSTALLTRNYTNFQVFLFLVLLSVVYFSESINEYAAANWKTFSKQQYFDNNGLF 92

Query: 52  ISIVFSIPLLLNCMILVLKRKYTCKEPYPNLKTP 85
           IS VFSIP+LLNCM+L+    Y   +    LKT 
Sbjct: 93  ISTVFSIPILLNCMLLIGTWLYNSTQIMVTLKTA 126

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
FB|FBgn0050051	151	CG30051 [Drosophila melanogast	0.519	0.350	0.648	1.3e-15
ZFIN|ZDB-GENE-040927-26	152	tmem18 "transmembrane protein	0.509	0.342	0.596	4.4e-13
UNIPROTKB|Q3SZ36	139	TMEM18 "Transmembrane protein	0.5	0.366	0.568	1.2e-12
UNIPROTKB|Q96B42	140	TMEM18 "Transmembrane protein	0.5	0.364	0.588	1.5e-12
RGD|1359389	140	Tmem18 "transmembrane protein	0.5	0.364	0.568	1.5e-12
MGI|MGI:2387176	140	Tmem18 "transmembrane protein	0.5	0.364	0.549	5e-12
UNIPROTKB|Q5F410	142	TMEM18 "Transmembrane protein	0.539	0.387	0.527	6.4e-12
UNIPROTKB|Q28GF5	136	tmem18 "Transmembrane protein	0.558	0.419	0.491	7.4e-11
UNIPROTKB|Q4V7N7	136	tmem18 "Transmembrane protein	0.558	0.419	0.473	1.5e-10

FB|FBgn0050051 CG30051 [Drosophila melanogaster (taxid:7227)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 35/54 (64%), Positives = 46/54 (85%)

Query:    16 YLFILL-VYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILV 68
             +L +LL VYF+E++NEFA NNW SF+R +YFD  G+FIS VFSIP+LLNCM+L+
Sbjct:    56 FLVLLLAVYFTESINEFAANNWSSFSRQQYFDSNGLFISTVFSIPILLNCMLLI 109

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-040927-26 tmem18 "transmembrane protein 18" [Danio rerio (taxid:7955)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 31/52 (59%), Positives = 42/52 (80%)

Query:    17 LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILV 68
             L + +VY +E LNE A  NWRSF++ +YFD KGMFIS+V+S+PLLLN +I+V
Sbjct:    69 LMVAMVYSAEYLNELAAMNWRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIV 120

GO:0031965 "nuclear membrane" evidence=ISS

GO:0003677 "DNA binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q3SZ36 TMEM18 "Transmembrane protein 18" [Bos taurus (taxid:9913)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 29/51 (56%), Positives = 41/51 (80%)

Query:    19 ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVL 69
             + LVY +E +NE A  NWR F++H+YFD +GMFIS+VFS PLLLN +++V+
Sbjct:    60 VTLVYCAEYINEVAAMNWRLFSKHQYFDSRGMFISLVFSAPLLLNALVIVV 110

GO:0031965 "nuclear membrane" evidence=ISS

GO:0016477 "cell migration" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q96B42 TMEM18 "Transmembrane protein 18" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 30/51 (58%), Positives = 42/51 (82%)

Query:    19 ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVL 69
             ++LVY +E +NE A  NWR F++++YFD +GMFISIVFS PLL+N MI+V+
Sbjct:    60 VILVYCAEYINEAAAMNWRLFSKYQYFDSRGMFISIVFSAPLLVNAMIIVV 110

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IDA

GO:0016477 "cell migration" evidence=IDA

RGD|1359389 Tmem18 "transmembrane protein 18" [Rattus norvegicus (taxid:10116)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 29/51 (56%), Positives = 41/51 (80%)

Query:    19 ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVL 69
             ++LVY +E +NE A  NWR FA+++YFD +GMFIS+VFS PLL N M++V+
Sbjct:    60 VVLVYCAEYINEVAAMNWRLFAKYQYFDSRGMFISLVFSAPLLFNAMVIVI 110

GO:0003677 "DNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016477 "cell migration" evidence=ISO;ISS;IDA

GO:0031965 "nuclear membrane" evidence=ISO;ISS

MGI|MGI:2387176 Tmem18 "transmembrane protein 18" [Mus musculus (taxid:10090)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 28/51 (54%), Positives = 41/51 (80%)

Query:    19 ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVL 69
             ++LVY +E +NE A  NWR F++++YFD +GMFIS+VFS PLL N M++V+
Sbjct:    60 VVLVYSAEYINEVAAVNWRLFSKYQYFDSRGMFISLVFSAPLLFNAMLIVI 110

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016477 "cell migration" evidence=ISO

GO:0031965 "nuclear membrane" evidence=ISO

UNIPROTKB|Q5F410 TMEM18 "Transmembrane protein 18" [Gallus gallus (taxid:9031)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 29/55 (52%), Positives = 42/55 (76%)

Query:    19 ILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKY 73
             + LVY +E +NE A  NWR F++++YFD +GMFIS+VFS PLL+N +I+V+   Y
Sbjct:    64 VCLVYCAEYINELAAMNWRLFSKYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVY 118

GO:0003677 "DNA binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0031965 "nuclear membrane" evidence=ISS

UNIPROTKB|Q28GF5 tmem18 "Transmembrane protein 18" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 28/57 (49%), Positives = 41/57 (71%)

Query:    17 LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKY 73
             L ++LV  +E +NEFA  +WRS+++ +YFD  GMFIS+ FS PLL N +I+V+   Y
Sbjct:    53 LMVVLVSCAEYINEFAAMHWRSYSKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVY 109

GO:0031965 "nuclear membrane" evidence=ISS

UNIPROTKB|Q4V7N7 tmem18 "Transmembrane protein 18" [Xenopus laevis (taxid:8355)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 27/57 (47%), Positives = 41/57 (71%)

Query:    17 LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKY 73
             L ++LV  +E +NEFA  +WR++++ +YFD  GMFIS+ FS PLL N +I+V+   Y
Sbjct:    53 LMVVLVSCAEYINEFAAMHWRAYSKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVY 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.333   0.148   0.471    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102        88   0.00091  102 3  11 21  0.36    29
                                                     29  0.49    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  119 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.56u 0.11s 9.67t   Elapsed:  00:00:01
  Total cpu time:  9.56u 0.11s 9.67t   Elapsed:  00:00:01
  Start:  Thu Aug 15 11:42:53 2013   End:  Thu Aug 15 11:42:54 2013

GO:0031965 "nuclear membrane" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3TUD9	TMM18_MOUSE	No assigned EC number	0.5490	0.5	0.3642	yes	N/A
Q641M3	TMM18_DANRE	No assigned EC number	0.5961	0.5098	0.3421	yes	N/A
Q3SZ36	TMM18_BOVIN	No assigned EC number	0.5686	0.5	0.3669	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
PF14770	123	TMEM18: Transmembrane protein 18	100.0
PF12357	74	PLD_C: Phospholipase D C terminal ; InterPro: IPR0	92.43

>PF14770 TMEM18: Transmembrane protein 18

Probab=100.00  E-value=5.7e-40  Score=235.89  Aligned_cols=88  Identities=39%  Similarity=0.745  Sum_probs=82.1

Q ss_pred             hhhhHhhhccchh---------hhHHHhhhhhhhhHHHHhhHhhhccccccCCCCceehhhhHHHHHHHHHHHHHHHHHH
Q psy14123          4 LLVFSIVLKPRPY---------LFILLVYFSENLNEFAHNNWRSFARHEYFDEKGMFISIVFSIPLLLNCMILVLKRKYT   74 (102)
Q Consensus         4 l~~~~i~l~~~~~---------~ll~lVy~aE~iNe~aa~nW~~Fs~qnYFDs~G~FISvv~S~PLLl~~~iili~~l~~   74 (102)
                      +++++.++.+|+.         +++++||+||+|||+||+|||+||+||||||+|+|||+|||+|+|++|++++++|+++
T Consensus        25 ~~~~~~~~~tr~~~~~q~~lf~~ll~~v~~aE~iN~~~a~nW~~Fs~qnYFDs~G~Fisvv~s~PlLl~~~ii~~~~l~~  104 (123)
T PF14770_consen   25 VLLLLLAILTRRRYNFQMILFLILLLLVYCAEYINEYAARNWRSFSKQNYFDSSGVFISVVFSAPLLLNCLIILVNWLYQ  104 (123)
T ss_pred             HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCCCeeehHHHHHhHHHHHHHHHHHHHHH
Confidence            5566677777766         7788999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccccccccccccccc
Q psy14123         75 CKEPYPNLKTPLCLTPL   91 (102)
Q Consensus        75 ~~~lmv~~Kraql~~~~   91 (102)
                      ++++||++||+|+|+|+
T Consensus       105 ~~~lmv~~Kr~qlr~~~  121 (123)
T PF14770_consen  105 LCSLMVQVKRAQLRRKA  121 (123)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999999876

>PF12357 PLD_C: Phospholipase D C terminal ; InterPro: IPR024632 Phospholipase D (PLD) catalyses the hydrolysis of the phosphodiester bond of glycerophospholipids to generate phosphatidic acid and a free head group

Probab=92.43  E-value=0.11  Score=35.12  Aligned_cols=27  Identities=33%  Similarity=0.580  Sum_probs=22.4

Q ss_pred             hhhhhhhHHHHhhHhhhccccccCCCC
Q psy14123         23 YFSENLNEFAHNNWRSFARHEYFDEKG   49 (102)
Q Consensus        23 y~aE~iNe~aa~nW~~Fs~qnYFDs~G   49 (102)
                      =|..++|+.|.+||+.|++...=|=.|
T Consensus        12 eCVr~Vn~iae~nW~~y~~ee~~dl~G   38 (74)
T PF12357_consen   12 ECVRRVNEIAEENWKQYASEEVTDLPG   38 (74)
T ss_pred             HHHHHHHHHHHHHHHHhhccccccCCC
Confidence            367899999999999999888755555

Phospholipase D activities have been detected in simple to complex organisms from viruses and bacteria to yeast, plants, and mammals []. In higher organisms, PLD specifically catalyzes the hydrolysis of phosphatidylcholine (PC) to phosphatidic acid (PA) and choline and is activated in response to stimulators of vesicle transport, endocytosis, exocytosis, cell migration, and mitosis. This entry represents the C-terminal domain of eukaryotic phospholipase D. The domain is approximately 70 amino acids in length and contains a conserved FPD sequence motif.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00