Psyllid ID: psy14136

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530----
Protein Sequence
MYSDLGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKPATGSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHDVDGINCNT
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccEEHHHHHHHEEEEcccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHEEHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccHHHHHccHHHHHHHHHHHcHcHHHHHHHHHcHHHHHHHHcccccHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mysdlgrftdaVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQsnannsnsnssqpycyvatepgtsargnvsellfndtmllekpnvneegefdwdtttqGAILSSFYWCYILSQVVGGVltqrfgtktvfGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVghwipsnersrfmssfqgfsfgigltyPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLafdaplkhpritrKELDYIqenieptivgskglkvpwvsiltsppawaigITTFGRIWVHYIFIIPGPRYMKTILGFSiqtnglltgapFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAnvvdigpnfagpILAFAQTIHMTAsflspmvagyflqddetSLESWRQVFLIAGAVGSCTYFFYQVlgtsevqpwnqlkpatgsprnnkspeqkpficedgrrasivksngttshdvdgincnt
Flexible Loop (DISEMBL)
mysdlgrftdavpARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIeptivgskglkvPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKpatgsprnnkspeqkpficedgrRASIvksngttshdvdgincnt
Low Complexity Region (SEG)
MYSDLGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQsnannsnsnssQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKPATGSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHDVDGINCNT
Disordered region (IsUnstruct)
******RFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKF**************YCYVAT*******GNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW*************************************************
Disordered Region (DISOPRED)
*********DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMV*****************CYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK*****************************WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWN************************************************
Disordered Region (DISEMBL)
MYSDLGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKPA************KPFICEDGRRASIVKSNGTTSHDVDGINCNT
Disordered Region (DISPRO)
*YS*LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKF*************************************************GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV****************************************************
Transmembrane Helix (TMHMM)
ooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MYSDLGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKPATGSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHDVDGINCNT
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	534	2.2.26 [Sep-21-2011]
Q9NRA2	495	Sialin OS=Homo sapiens GN	yes	N/A	0.835	0.901	0.329	3e-68
A6QLI1	582	Vesicular glutamate trans	yes	N/A	0.846	0.776	0.320	7e-68
Q9JI12	582	Vesicular glutamate trans	yes	N/A	0.897	0.823	0.310	9e-68
Q8BLE7	582	Vesicular glutamate trans	yes	N/A	0.897	0.823	0.310	1e-67
Q9P2U8	582	Vesicular glutamate trans	no	N/A	0.846	0.776	0.318	1e-67
Q9MZD1	495	Sialin OS=Ovis aries GN=S	N/A	N/A	0.837	0.903	0.331	5e-67
Q6INC8	576	Vesicular glutamate trans	N/A	N/A	0.846	0.784	0.306	3e-66
Q05B21	576	Vesicular glutamate trans	yes	N/A	0.838	0.777	0.310	7e-66
Q5W8I8	584	Vesicular glutamate trans	no	N/A	0.848	0.775	0.308	4e-65
Q62634	560	Vesicular glutamate trans	no	N/A	0.818	0.780	0.315	8e-65

>sp|Q9NRA2|S17A5_HUMAN Sialin OS=Homo sapiens GN=SLC17A5 PE=1 SV=2

 Score =  259 bits (663), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 249/474 (52%), Gaps = 28/474 (5%)

Query: 14  ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSAR 73
           AR  L +++F GF + + +R ++++A+V MV   SN    ++ +S+  C   + P     
Sbjct: 38  ARYNLAILAFFGFFIVYALRVNLSVALVDMV--DSNTTLEDNRTSKA-CPEHSAP----- 89

Query: 74  GNVSELLFNDTMLLEKPNVNEEGE-FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGT 132
                          K + N+ G+ + WD  TQG IL SF++ YI++Q+ GG +  + G 
Sbjct: 90  --------------IKVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIGG 135

Query: 133 KTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNER 192
           K + GF  L TA+ +L  P AA L  G LI LR+++G+  G+T+PAM+A+   W P  ER
Sbjct: 136 KMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLER 195

Query: 193 SRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH 251
           S+ +S S+ G   G  ++ PL G +  +  W  VFY  G++G  W + W +L  D P KH
Sbjct: 196 SKLLSISYAGAQLGTVISLPLSGIICYYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKH 255

Query: 252 PRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGP 311
            RI+  E +YI  ++   +   K   VPWV IL S P WAI +  F   W  Y  +   P
Sbjct: 256 KRISHYEKEYILSSLRNQLSSQK--SVPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLP 313

Query: 312 RYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV 371
            YMK IL F++Q NG L+  P+L S+L  +L    AD L  +   S   +R++F+ I  +
Sbjct: 314 TYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMI 373

Query: 372 IPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIH 431
            PA+ ++  G++GC+ +L +    ++ TL     +G   N +DI P++AG +L    T  
Sbjct: 374 GPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFA 433

Query: 432 MTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
                + P++A     D+  ++  W+ VF IA A+      F+ +    EVQ W
Sbjct: 434 TIPGMVGPVIAKSLTPDN--TVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNW 485

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.
Homo sapiens (taxid: 9606)

>sp|A6QLI1|VGLU2_BOVIN Vesicular glutamate transporter 2 OS=Bos taurus GN=SLC17A6 PE=2 SV=1

 Score =  258 bits (660), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 162/505 (32%), Positives = 254/505 (50%), Gaps = 53/505 (10%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V MV      NNS                T
Sbjct: 66  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMV------NNS----------------T 103

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
             RG                 + E+ +F+WD  T G I  SF+W YI++Q+ GG +  R 
Sbjct: 104 IHRGG--------------KVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGYIASRL 149

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFG + L+T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  
Sbjct: 150 AANRVFGAAILLTSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPL 209

Query: 191 ERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR   +SF G   G  +  PL G L+ + GW SVFY  GS G IW + W  +++++P 
Sbjct: 210 ERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMIWYMFWLLVSYESPA 269

Query: 250 KHPRITRKELDYIQENI--EPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306
           KHP IT +E  YI+E+I     ++G+ +  K PW    TS P +AI +  F R W  Y+ 
Sbjct: 270 KHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLL 329

Query: 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366
           +I  P Y + + GF I   G+L+  P L   +   +   +AD L  + I+S T +RK+  
Sbjct: 330 LISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMN 389

Query: 367 AISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILA 425
                + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++ 
Sbjct: 390 CGGFGMEATLLLVVGY--SHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMG 447

Query: 426 FAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
            +  +   +  + P++ G   ++   S E W+ VFLIA  V      FY +  + E QPW
Sbjct: 448 ISNGVGTLSGMVCPIIVGAMTKNK--SREEWQYVFLIAALVHYGGVIFYAIFASGEKQPW 505

Query: 486 NQLKPATGSPRNNKSPEQKPFICED 510
                   +     S E+  FI ED
Sbjct: 506 --------ADPEETSEEKCGFIHED 522

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Bos taurus (taxid: 9913)

>sp|Q9JI12|VGLU2_RAT Vesicular glutamate transporter 2 OS=Rattus norvegicus GN=Slc17a6 PE=1 SV=1

 Score =  258 bits (659), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 263/528 (49%), Gaps = 49/528 (9%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V MV      NNS                T
Sbjct: 66  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMV------NNS----------------T 103

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
             RG                 + E+ +F+WD  T G I  SF+W YI++Q+ GG +  R 
Sbjct: 104 IHRGG--------------KVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGYIASRL 149

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFG + L+T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  
Sbjct: 150 AANRVFGAAILLTSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPL 209

Query: 191 ERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR   +SF G   G  +  PL G L+ + GW SVFY  GS G +W + W  +++++P 
Sbjct: 210 ERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMVWYMFWLLVSYESPA 269

Query: 250 KHPRITRKELDYIQENI--EPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306
           KHP IT +E  YI+E+I     ++G+ +  K PW    TS P +AI +  F R W  Y+ 
Sbjct: 270 KHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLL 329

Query: 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366
           +I  P Y + + GF I   G+L+  P L   +   +   +AD L  + I+S T +RK+  
Sbjct: 330 LISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMN 389

Query: 367 AISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILA 425
                + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++ 
Sbjct: 390 CGGFGMEATLLLVVGY--SHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMG 447

Query: 426 FAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
            +  +   +  + P++ G   ++   S E W+ VFLIA  V      FY +  + E QPW
Sbjct: 448 ISNGVGTLSGMVCPIIVGAMTKNK--SREEWQYVFLIAALVHYGGVIFYALFASGEKQPW 505

Query: 486 NQLKPAT----GSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHDVDG 529
              +  +    G    ++  E+   I ++       KS G TS +  G
Sbjct: 506 ADPEETSEEKCGFIHEDELDEETGDITQNYINYGTTKSYGATSQENGG 553

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas. May also mediate the transport of inorganic phosphate.

Rattus norvegicus (taxid: 10116)

>sp|Q8BLE7|VGLU2_MOUSE Vesicular glutamate transporter 2 OS=Mus musculus GN=Slc17a6 PE=1 SV=1

 Score =  258 bits (658), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 263/528 (49%), Gaps = 49/528 (9%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V MV      NNS                T
Sbjct: 66  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMV------NNS----------------T 103

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
             RG                 + E+ +F+WD  T G I  SF+W YI++Q+ GG +  R 
Sbjct: 104 IHRGG--------------KVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGYIASRL 149

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFG + L+T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  
Sbjct: 150 AANRVFGAAILLTSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPL 209

Query: 191 ERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR   +SF G   G  +  PL G L+ + GW SVFY  GS G +W + W  +++++P 
Sbjct: 210 ERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMVWYMFWLLVSYESPA 269

Query: 250 KHPRITRKELDYIQENI--EPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306
           KHP IT +E  YI+E+I     ++G+ +  K PW    TS P +AI +  F R W  Y+ 
Sbjct: 270 KHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLL 329

Query: 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366
           +I  P Y + + GF I   G+L+  P L   +   +   +AD L  + I+S T +RK+  
Sbjct: 330 LISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMN 389

Query: 367 AISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILA 425
                + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++ 
Sbjct: 390 CGGFGMEATLLLVVGY--SHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMG 447

Query: 426 FAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
            +  +   +  + P++ G   ++   S E W+ VFLIA  V      FY +  + E QPW
Sbjct: 448 ISDGVGTLSGMVCPIIVGAMTKNK--SREEWQYVFLIAALVHYGGVIFYALFASGEKQPW 505

Query: 486 NQLKPAT----GSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHDVDG 529
              +  +    G    ++  E+   I ++       KS G TS +  G
Sbjct: 506 ADPEETSEEKCGFIHEDELDEETGDITQNYINYGTTKSYGATSQENGG 553

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Mus musculus (taxid: 10090)

>sp|Q9P2U8|VGLU2_HUMAN Vesicular glutamate transporter 2 OS=Homo sapiens GN=SLC17A6 PE=1 SV=1

 Score =  257 bits (657), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 161/505 (31%), Positives = 254/505 (50%), Gaps = 53/505 (10%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V MV      NNS                T
Sbjct: 66  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMV------NNS----------------T 103

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
             RG                 + E+ +F+WD  T G I  SF+W YI++Q+ GG +  R 
Sbjct: 104 IHRGG--------------KVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGYIASRL 149

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFG + L+T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  
Sbjct: 150 AANRVFGAAILLTSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPL 209

Query: 191 ERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR   +SF G   G  +  PL G L+ + GW SVFY  GS G +W + W  +++++P 
Sbjct: 210 ERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMVWYMFWLLVSYESPA 269

Query: 250 KHPRITRKELDYIQENI--EPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306
           KHP IT +E  YI+E+I     ++G+ +  K PW    TS P +AI +  F R W  Y+ 
Sbjct: 270 KHPTITDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLL 329

Query: 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366
           +I  P Y + + GF I   G+L+  P L   +   +   +AD L  + I+S T +RK+  
Sbjct: 330 LISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMN 389

Query: 367 AISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILA 425
                + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++ 
Sbjct: 390 CGGFGMEATLLLVVGY--SHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMG 447

Query: 426 FAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
            +  +   +  + P++ G   ++   S E W+ VFLIA  V      FY +  + E QPW
Sbjct: 448 ISNGVGTLSGMVCPIIVGAMTKNK--SREEWQYVFLIAALVHYGGVIFYAIFASGEKQPW 505

Query: 486 NQLKPATGSPRNNKSPEQKPFICED 510
                   +     S E+  FI ED
Sbjct: 506 --------ADPEETSEEKCGFIHED 522

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Homo sapiens (taxid: 9606)

>sp|Q9MZD1|S17A5_SHEEP Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1

 Score =  255 bits (652), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 242/473 (51%), Gaps = 26/473 (5%)

Query: 14  ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSAR 73
           AR  L  +SF GF V + +R ++++A+V MV   + A +   N +   C   + P     
Sbjct: 38  ARYNLAFLSFFGFFVLYSLRVNLSVALVDMVDSNTTAKD---NRTSYECAEHSAP----- 89

Query: 74  GNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTK 133
               ++L N T            ++ WD  TQG IL SF++ YI++Q+ GG +  R G K
Sbjct: 90  ---IKVLHNQT----------GKKYRWDAETQGWILGSFFYGYIITQIPGGYVASRSGGK 136

Query: 134 TVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERS 193
            + GF    TAI +L  P AA    GAL+ALR+++G+  G+T+PAM+A+   W P  ERS
Sbjct: 137 LLLGFGIFATAIFTLFTPLAADFGVGALVALRALEGLGEGVTYPAMHAMWSSWAPPLERS 196

Query: 194 RFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP 252
           + +S S+ G   G  ++ PL G +  +  W  VFY  G +G IW + W  L  D P  H 
Sbjct: 197 KLLSISYAGAQLGTVVSLPLSGVICYYMNWTYVFYFFGIVGIIWFILWICLVSDTPETHK 256

Query: 253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPR 312
            IT  E +YI  +++  +   K   VPW+ +L S P WAI +  F   W  Y  +   P 
Sbjct: 257 TITPYEKEYILSSLKNQLSSQK--SVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPT 314

Query: 313 YMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI 372
           YMK +L F+IQ NG L+  P+L  +L  +L    AD L  R   S   +R+VF+ I  + 
Sbjct: 315 YMKEVLRFNIQENGFLSAVPYLGCWLCMILSGQAADNLRARWNFSTLWVRRVFSLIGMIG 374

Query: 373 PALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHM 432
           PA+ ++  G++GC+ +L +    ++ TL     +G   N +DI P++AG +L    T   
Sbjct: 375 PAIFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFAT 434

Query: 433 TASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
               + P++A       E ++  W+ VF IA A+      F+ +    EVQ W
Sbjct: 435 IPGMIGPIIARSL--TPENTIGEWQTVFCIAAAINVFGAIFFTLFAKGEVQNW 485

Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes (Probable). Receptor for CM101, a polysaccharide produced by group B Streptococcus with antipathoangiogenic properties.

Ovis aries (taxid: 9940)

>sp|Q6INC8|VGLU1_XENLA Vesicular glutamate transporter 1 OS=Xenopus laevis GN=slc17a7 PE=2 SV=1

 Score =  253 bits (646), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 252/505 (49%), Gaps = 53/505 (10%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V+MV                          
Sbjct: 58  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMVN------------------------- 92

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
                      N+T+      V E+ +F+WD  T G I  SF+W YI++Q+ GG + Q+F
Sbjct: 93  -----------NNTVYKGNKLVIEQAQFNWDPETVGMIHGSFFWGYIVTQIPGGYICQKF 141

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFGF+ + T+  ++LIP AA +H+  +I +R +QG+  G+T+PA + +   W P  
Sbjct: 142 AANRVFGFAIVATSTLNMLIPSAARVHFACVICVRILQGLVEGVTYPACHGIWSKWAPPL 201

Query: 191 ERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR   ++F G   G  +  PL G L+ + GW SVFY  GS G  W + W  +++++P 
Sbjct: 202 ERSRLATTAFCGSYAGAVVAMPLAGVLVQYSGWSSVFYVYGSFGITWYMFWILVSYESPA 261

Query: 250 KHPRITRKELDYIQENIEPT---IVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306
           +HP I+ +E  YI+E+I  +   +      K PW    TS P +AI +  F R W  Y+ 
Sbjct: 262 QHPTISEEERKYIEESIGESTGFMNPMAKFKAPWRKFFTSMPVYAIIVANFCRSWTFYLL 321

Query: 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366
           +I  P Y + + GF+I   GLL+  P L   +   +   +AD L  + IMS TN+RK+  
Sbjct: 322 LISQPAYFEEVFGFAISKVGLLSALPHLVMTIIVPIGGQIADFLRTKRIMSTTNVRKMMN 381

Query: 367 AISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILA 425
                + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++ 
Sbjct: 382 CGGFGMEATLLLVVGY--SHSRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMG 439

Query: 426 FAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
            +  +   +  + P++ G   +    + E W+ VFLIA  V      FY +  + E QPW
Sbjct: 440 ISNGVGTLSGMVCPLIVGAMTKHK--TREEWQYVFLIASLVHYGGVVFYGIFASGEKQPW 497

Query: 486 NQLKPATGSPRNNKSPEQKPFICED 510
            + +          S E+  FI ED
Sbjct: 498 AEPE--------ETSDEKCGFIHED 514

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Xenopus laevis (taxid: 8355)

>sp|Q05B21|VGLU1_XENTR Vesicular glutamate transporter 1 OS=Xenopus tropicalis GN=slc17a7 PE=2 SV=1

 Score =  251 bits (642), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 158/509 (31%), Positives = 251/509 (49%), Gaps = 61/509 (11%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V+MV                          
Sbjct: 58  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMVN------------------------- 92

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
                      N+T+      V E+ +F WD  T G I  SF+W YI++Q+ GG + Q+F
Sbjct: 93  -----------NNTVYKGNKIVIEQAQFTWDPETVGMIHGSFFWGYIVTQIPGGYICQKF 141

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFGF+ + T+  ++LIP AA +H+  +I +R +QG+  G+T+PA + +   W P  
Sbjct: 142 AANRVFGFAIVATSTLNMLIPSAARVHFACVICVRILQGLVEGVTYPACHGIWSKWAPPL 201

Query: 191 ERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR  ++ F G   G  +  PL G L+ + GW SVFY  GS G +W + W  +++++P 
Sbjct: 202 ERSRLATTAFCGSYAGAVVAMPLAGVLVQYSGWSSVFYVYGSFGIMWYMFWILVSYESPA 261

Query: 250 KHPRITRKELDYIQENIEPTIVGSKGL-------KVPWVSILTSPPAWAIGITTFGRIWV 302
            HP I+ +E  YI+E+I      S GL       K PW    TS P +AI +  F R W 
Sbjct: 262 IHPTISEEEKKYIEESIGE----STGLMNPMAKFKAPWRKFFTSMPVYAIIVANFCRSWT 317

Query: 303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIR 362
            Y+ +I  P Y + + GF I   GLL+  P L   +   +   +AD L  + IMS TN+R
Sbjct: 318 FYLLLISQPAYFEEVFGFEISKVGLLSALPHLVMTIIVPIGGQIADFLRTKRIMSTTNVR 377

Query: 363 KVFTAISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAG 421
           K+       + A L++++GY   +   V I++ V AV     + +G   N +DI P +A 
Sbjct: 378 KMMNCGGFGMEATLLLVVGY--SHSRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYAS 435

Query: 422 PILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSE 481
            ++  +  +   +  + P++ G   +    + E W+ VFLIA  V      FY +  + E
Sbjct: 436 ILMGISNGVGTLSGMVCPLIVGAMTKHK--TREEWQYVFLIASLVHYGGVLFYGIFASGE 493

Query: 482 VQPWNQLKPATGSPRNNKSPEQKPFICED 510
            QPW + +          S E+  FI ED
Sbjct: 494 KQPWAEPE--------ETSDEKCGFIHED 514

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.

Xenopus tropicalis (taxid: 8364)

>sp|Q5W8I8|VGL2A_DANRE Vesicular glutamate transporter 2.1 OS=Danio rerio GN=slc17a6b PE=2 SV=2

 Score =  249 bits (636), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 252/505 (49%), Gaps = 52/505 (10%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V+MV                          
Sbjct: 65  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMV-------------------------- 98

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
               N S +  N  ++     + E+ +F+WD  T G I  SF+W YI++Q+ GG ++ R 
Sbjct: 99  ----NNSTIHLNGKII-----IKEKAKFNWDPETVGLIHGSFFWGYIVTQIPGGYISSRL 149

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFG + L+T+  ++ IP AA  HYG +I +R +QG+  G+T+PA + +   W P  
Sbjct: 150 AANRVFGAAILLTSTLNMFIPSAARGHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPL 209

Query: 191 ERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR   +SF G   G  +  PL G L+ + GW SVFY  G  G  W + W  +++++P 
Sbjct: 210 ERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGCFGIFWYMFWILVSYESPA 269

Query: 250 KHPRITRKELDYIQENIEPT--IVG-SKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306
           +HP IT +E  YI+E+I  +  ++G +   K PW    TS P +AI +  F R W  Y+ 
Sbjct: 270 EHPTITAEERCYIEESIGESAKLLGPADKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLL 329

Query: 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366
           +I  P Y + + GF I   G+L+  P L   +   +   LAD L  +NI+S T +RK+  
Sbjct: 330 LISQPAYFEEVFGFEISKVGMLSALPHLVMTIIVPIGGQLADHLRSKNILSTTTVRKIMN 389

Query: 367 AISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILA 425
                + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++ 
Sbjct: 390 CGGFGMEATLLLIVGY--SHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMG 447

Query: 426 FAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
            +  +   +  + P++ G   +    + E W+ VFLIA  V      FY +  + E QPW
Sbjct: 448 ISNGVGTLSGMVCPLIVGAMTKHK--TREEWQYVFLIASLVHYGGVIFYGIFASGEKQPW 505

Query: 486 NQLKPATGSPRNNKSPEQKPFICED 510
                   +     S E+  FI ED
Sbjct: 506 --------ADPELTSDEKCGFIDED 522

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. Required for glutamate release by retinotectal synapses and visual acuity.

Danio rerio (taxid: 7955)

>sp|Q62634|VGLU1_RAT Vesicular glutamate transporter 1 OS=Rattus norvegicus GN=Slc17a7 PE=1 SV=1

 Score =  248 bits (633), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 246/482 (51%), Gaps = 45/482 (9%)

Query: 11  AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGT 70
            +P R ++ +MS  GF +SF +R ++ +A+V+MV      NNS ++              
Sbjct: 58  GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMV------NNSTTHRG------------ 99

Query: 71  SARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
              G+V               V ++ +F+WD  T G I  SF+W YI++Q+ GG + Q+F
Sbjct: 100 ---GHV---------------VVQKAQFNWDPETVGLIHGSFFWGYIVTQIPGGFICQKF 141

Query: 131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
               VFGF+ + T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  
Sbjct: 142 AANRVFGFAIVATSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPL 201

Query: 191 ERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           ERSR   ++F G   G  +  PL G L+ + GW SVFY  GS G  W + W  +++++P 
Sbjct: 202 ERSRLATTAFCGSYAGAVVAMPLAGVLVQYSGWSSVFYVYGSFGIFWYLFWLLVSYESPA 261

Query: 250 KHPRITRKELDYIQENIEPT---IVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF 306
            HP I+ +E  YI++ I  +   +        PW    TS P +AI +  F R W  Y+ 
Sbjct: 262 LHPSISEEERKYIEDAIGESAKLMNPVTKFNTPWRRFFTSMPVYAIIVANFCRSWTFYLL 321

Query: 307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT 366
           +I  P Y + + GF I   GL++  P L   +   +   +AD L  R+IMS TN+RK+  
Sbjct: 322 LISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQIADFLRSRHIMSTTNVRKLMN 381

Query: 367 AISQVIPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILA 425
                + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++ 
Sbjct: 382 CGGFGMEATLLLVVGY--SHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMG 439

Query: 426 FAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
            +  +   +  + P++ G   +    + E W+ VFLIA  V      FY V  + E QPW
Sbjct: 440 ISNGVGTLSGMVCPIIVGAMTKHK--TREEWQYVFLIASLVHYGGVIFYGVFASGEKQPW 497

Query: 486 NQ 487
            +
Sbjct: 498 AE 499

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	534
193634136	517	PREDICTED: vesicular glutamate transport	0.908	0.938	0.682	0.0
307176865	848	Vesicular glutamate transporter 2 [Campo	0.874	0.550	0.668	0.0
340712802	792	PREDICTED: vesicular glutamate transport	0.904	0.609	0.644	0.0
350409200	799	PREDICTED: vesicular glutamate transport	0.904	0.604	0.642	0.0
380015449	790	PREDICTED: vesicular glutamate transport	0.947	0.640	0.608	0.0
332020478	888	Vesicular glutamate transporter 3 [Acrom	0.872	0.524	0.648	0.0
383847631	766	PREDICTED: vesicular glutamate transport	0.876	0.610	0.656	0.0
328777636	790	PREDICTED: vesicular glutamate transport	0.872	0.589	0.659	0.0
322785502	517	hypothetical protein SINV_11370 [Solenop	0.940	0.970	0.614	0.0
345485012	501	PREDICTED: vesicular glutamate transport	0.882	0.940	0.631	0.0

>gi|193634136|ref|XP_001947138.1| PREDICTED: vesicular glutamate transporter 1-like [Acyrthosiphon pisum]

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/501 (68%), Positives = 387/501 (77%), Gaps = 16/501 (3%)

Query: 10  DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPG 69
           D +PAR VLY+MSF+GFLVSFMMRTDINIAMVAM K +  + NS SN ++ YCY +   G
Sbjct: 24  DMIPARAVLYLMSFSGFLVSFMMRTDINIAMVAMAKMRLRSENS-SNLTELYCYTSVTNG 82

Query: 70  TSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR 129
           T +        F D    +KP   EEGEFDWD+T Q AIL SFYWCYILSQVVGGVLTQR
Sbjct: 83  TQS--------FED----QKPM--EEGEFDWDSTVQSAILGSFYWCYILSQVVGGVLTQR 128

Query: 130 FGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPS 189
           FGTKTVFGFSQL TAI SLLIPQAA LH+ A+IALRS+QG+ASGLTWPAMYALVG WIPS
Sbjct: 129 FGTKTVFGFSQLATAIASLLIPQAASLHFSAVIALRSLQGMASGLTWPAMYALVGIWIPS 188

Query: 190 NERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL 249
           NER+RFMSSFQGFSFGIGLTY +CGF+I +YGWR VFY  GSLG  WC+ WW LAFD P 
Sbjct: 189 NERTRFMSSFQGFSFGIGLTYMVCGFIIGNYGWRVVFYMNGSLGVAWCLLWWLLAFDLPH 248

Query: 250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIP 309
           KHPRITR+EL+YI  NI   I+ +K LKVPW SI+TS PAW+IGITTFGRIWVHY FII 
Sbjct: 249 KHPRITRRELNYINANIGENIINTKDLKVPWCSIMTSIPAWSIGITTFGRIWVHYTFIIY 308

Query: 310 GPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS 369
           GP YMKTILGFSIQ NG + GAPFLCSYLSSV+FCY AD +  RN+MSLTN+RK+FTAIS
Sbjct: 309 GPSYMKTILGFSIQKNGFMNGAPFLCSYLSSVVFCYAADFIIARNLMSLTNVRKMFTAIS 368

Query: 370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQT 429
           QVIP LLV+ IGYLGC + L+L+ WFVAVTLITASYAGAMANVVDI PNFAG ILAFAQT
Sbjct: 369 QVIPGLLVLTIGYLGCQITLILVIWFVAVTLITASYAGAMANVVDIAPNFAGHILAFAQT 428

Query: 430 IHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLK 489
           IHM+ASFLSP+ A   LQD+ T LE WR++F +   V   TY  YQ  GT++ Q WN   
Sbjct: 429 IHMSASFLSPLAAAIMLQDNPT-LERWRRIFAVTACVACGTYVMYQFGGTAKEQVWNNPN 487

Query: 490 PATGSPRNNKSPEQKPFICED 510
               S     SPE    I  +
Sbjct: 488 RKNNSGSVRVSPENNQLIVNN 508

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176865|gb|EFN66209.1| Vesicular glutamate transporter 2 [Camponotus floridanus]

 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/483 (66%), Positives = 386/483 (79%), Gaps = 16/483 (3%)

Query: 5   LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYV 64
           L R  D VPARVVLYM+SF+GFLVSFMMRTDINIAMVAM K  S  NN     S  +CY+
Sbjct: 21  LRRLGDMVPARVVLYMLSFSGFLVSFMMRTDINIAMVAMAKIPSTLNNETIAVS-SHCYI 79

Query: 65  ATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGG 124
            +        N S +  N T++  +P   E+GEF+W    Q AILSSFYWCYILSQ++GG
Sbjct: 80  IS--------NASHVE-NKTII--RPE--EDGEFEWSPAIQSAILSSFYWCYILSQMLGG 126

Query: 125 VLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184
           VLTQ FGTKT+FG SQ+VTA+CSLL+P AA +HYGA+IALRSIQGIASGLTWPAMYA++G
Sbjct: 127 VLTQYFGTKTIFGGSQVVTAVCSLLMPTAAEIHYGAMIALRSIQGIASGLTWPAMYAVIG 186

Query: 185 HWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           HWIP  ERSRFMSSFQGFS GIGLTYPLC F+IAH+GWR VFYTTGS+G +WC+ W+F A
Sbjct: 187 HWIPPVERSRFMSSFQGFSIGIGLTYPLCAFIIAHFGWRIVFYTTGSIGLVWCIFWYFCA 246

Query: 245 FDAPLKHPRITRKELDYIQENIEPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVH 303
           FD P  HPRI++ EL YIQE +   ++G+ + L VPW SILTS PAWAIGITTFGRIWVH
Sbjct: 247 FDTPASHPRISKLELRYIQECVRNQVIGANEDLPVPWKSILTSWPAWAIGITTFGRIWVH 306

Query: 304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRK 363
           Y+FIIPGP YMKT+LGFSIQ NG+L+GAPF+CSYLSSV+FCY+AD L  R IM+L  +RK
Sbjct: 307 YVFIIPGPMYMKTVLGFSIQANGILSGAPFICSYLSSVVFCYIADLLVTRQIMTLITVRK 366

Query: 364 VFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPI 423
           +FTA+SQV+P +LV+LIGYLGC++ LVLI WF+AVTLITA YAGAMAN+VDI PNFAGP+
Sbjct: 367 IFTALSQVVPGILVVLIGYLGCDIILVLIIWFIAVTLITAGYAGAMANIVDIAPNFAGPV 426

Query: 424 LAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQ 483
           LAFAQTIHMTASFLSP+ AG   Q+ + SL++WR VF +   V   TY  YQ+ GT+++Q
Sbjct: 427 LAFAQTIHMTASFLSPIAAGLLTQESQ-SLDAWRNVFAVTAGVCCSTYIAYQMFGTADIQ 485

Query: 484 PWN 486
            WN
Sbjct: 486 AWN 488

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712802|ref|XP_003394944.1| PREDICTED: vesicular glutamate transporter 3-like [Bombus terrestris]

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/507 (64%), Positives = 390/507 (76%), Gaps = 24/507 (4%)

Query: 5   LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYV 64
           L +  D VPARVVLYM+SF+GF VSFMMR DINIAMVAMVK  S  +++N   +  YCYV
Sbjct: 23  LRKLRDLVPARVVLYMLSFSGFTVSFMMRNDINIAMVAMVKPPSTTSDTNVTVTSQYCYV 82

Query: 65  ATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGG 124
              P TS   N + +   D           +GEFDW  T Q AI SSFYWCYILSQVVGG
Sbjct: 83  T--PNTSFTNNSAPIRLED-----------QGEFDWSPTIQSAISSSFYWCYILSQVVGG 129

Query: 125 VLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184
           VLTQ FGTKTVFG SQL+TAICSLL+P AA +HYG +IALRSIQGIASGLTWPAMYA+VG
Sbjct: 130 VLTQYFGTKTVFGGSQLITAICSLLMPSAAGIHYGVMIALRSIQGIASGLTWPAMYAIVG 189

Query: 185 HWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           HWIP  ERSRFMSSFQGFSFGIG+TYPLCGF+IAH+GWR+VFYTTG++G +WC+ W+F A
Sbjct: 190 HWIPPVERSRFMSSFQGFSFGIGITYPLCGFIIAHFGWRAVFYTTGTIGTVWCLFWYFFA 249

Query: 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHY 304
           FD P  HPRI+++EL YIQ ++   +  S+ + VPW  IL S PAW+IGITTFGRIWVHY
Sbjct: 250 FDTPAAHPRISQQELRYIQGSVANQVHASESMPVPWSFILRSWPAWSIGITTFGRIWVHY 309

Query: 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKV 364
           IFII GP YMKT+LGFSIQ NG+L+G PF+CSY SSV FCY+AD L  R I+SLTN+RKV
Sbjct: 310 IFIISGPMYMKTVLGFSIQANGVLSGLPFICSYFSSVAFCYIADVLMTRQILSLTNVRKV 369

Query: 365 FTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPIL 424
           FTA SQVIP ++++LIGYLGCN+ LVL+ WF+AVTLITA+YAGAMAN+VDI PNFAGP+L
Sbjct: 370 FTASSQVIPGIMLVLIGYLGCNIVLVLVVWFIAVTLITAAYAGAMANIVDIAPNFAGPVL 429

Query: 425 AFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP 484
           AFAQTIHMTASFLSP+VAG   +  +T L++WRQVF +   V   TY  YQ+ GT ++Q 
Sbjct: 430 AFAQTIHMTASFLSPVVAGLLTEKSQT-LDAWRQVFGVTACVACGTYIVYQIFGTGDIQA 488

Query: 485 WNQLKPATGSPRN--------NKSPEQ 503
           WN   P    P++        N+SPE+
Sbjct: 489 WNY--PDQKYPQSIQEDSQPLNESPEK 513

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409200|ref|XP_003488649.1| PREDICTED: vesicular glutamate transporter 2-like [Bombus impatiens]

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/507 (64%), Positives = 390/507 (76%), Gaps = 24/507 (4%)

Query: 5   LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYV 64
           L +  D VPARVVLYM+SF+GF VSFMMR DINIAMVAMVK  S  +++N   +  YCYV
Sbjct: 30  LRKLRDLVPARVVLYMLSFSGFTVSFMMRNDINIAMVAMVKPPSTTSDTNVTVTSQYCYV 89

Query: 65  ATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGG 124
              P TS   N + +   D           +GEFDW  T Q AI SSFYWCYILSQVVGG
Sbjct: 90  T--PSTSFTNNSAPIRLED-----------QGEFDWSPTIQSAISSSFYWCYILSQVVGG 136

Query: 125 VLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184
           VLTQ FGTKTVFG SQL+TAICSLL+P AA +HYG +IALRSIQGIASGLTWPAMYA+VG
Sbjct: 137 VLTQYFGTKTVFGGSQLITAICSLLMPSAAEIHYGVMIALRSIQGIASGLTWPAMYAIVG 196

Query: 185 HWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           HWIP  ERSRFMSSFQGFSFGIG+TYPLCGF+IAH+GWR+VFYTTG++G +WC+ W+F A
Sbjct: 197 HWIPPVERSRFMSSFQGFSFGIGITYPLCGFIIAHFGWRAVFYTTGTIGTVWCLFWYFFA 256

Query: 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHY 304
           FD P  HPRI+++EL YIQ ++   +  S+ + VPW  IL S PAW+IGITTFGRIWVHY
Sbjct: 257 FDTPAAHPRISQQELRYIQGSVVNQVHASESMPVPWSFILRSWPAWSIGITTFGRIWVHY 316

Query: 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKV 364
           IFII GP YMKT+LGFSIQ NG+L+G PF+CSY SSV FCY+AD L  R I+SLTN+RKV
Sbjct: 317 IFIISGPMYMKTVLGFSIQANGVLSGLPFICSYFSSVAFCYIADVLMTRQILSLTNVRKV 376

Query: 365 FTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPIL 424
           FTA SQVIP ++++LIGYLGCN+ +VL+ WF+AVTLITA+YAGAMAN+VDI PNFAGP+L
Sbjct: 377 FTAFSQVIPGIMLVLIGYLGCNIVVVLVVWFIAVTLITAAYAGAMANIVDIAPNFAGPVL 436

Query: 425 AFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP 484
           AFAQTIHMTASFLSP+VAG   +  +T L++WRQVF +   V   TY  YQ+ GT ++Q 
Sbjct: 437 AFAQTIHMTASFLSPIVAGLLTEKSQT-LDAWRQVFGVTACVACGTYIVYQIFGTGDIQA 495

Query: 485 WNQLKPATGSPRN--------NKSPEQ 503
           WN   P    P++        N+SPE+
Sbjct: 496 WNY--PDQKYPQSIQEDSQPLNESPEK 520

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015449|ref|XP_003691714.1| PREDICTED: vesicular glutamate transporter 2-like [Apis florea]

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/544 (60%), Positives = 400/544 (73%), Gaps = 38/544 (6%)

Query: 5   LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYV 64
           L +  D VPARVVLYM+SF+GF VSFMMR DINIAMVAMVK  S  +++N   +  +CYV
Sbjct: 21  LQKLRDMVPARVVLYMLSFSGFTVSFMMRNDINIAMVAMVKPPSMTSDTNVTVTSQHCYV 80

Query: 65  ATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGG 124
              P T         + N++  ++   + ++GEFDW  T Q AI  SFYWCYILSQVVGG
Sbjct: 81  T--PPT---------VINNSAPIK---LEDQGEFDWSPTIQSAISGSFYWCYILSQVVGG 126

Query: 125 VLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184
           VLTQ FGTK VFG SQL+TAICSLL+P AA +HYG +IALRSIQG+ASGLTWPAMYA+VG
Sbjct: 127 VLTQYFGTKAVFGGSQLITAICSLLMPSAAGIHYGFMIALRSIQGVASGLTWPAMYAIVG 186

Query: 185 HWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           HWIP  ERSRFMSSFQGFSFGIGLTYPLCGF+IAH+GWR+VFYTTGS+G IWC  W+F A
Sbjct: 187 HWIPPVERSRFMSSFQGFSFGIGLTYPLCGFIIAHFGWRAVFYTTGSIGMIWCFFWYFFA 246

Query: 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHY 304
           FD P  HPRI+++EL YIQ ++    V  + + VPW  ILTS PAW+IGITTFGRIWVHY
Sbjct: 247 FDTPASHPRISQQELRYIQGSV-GNQVRDESMPVPWRFILTSWPAWSIGITTFGRIWVHY 305

Query: 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKV 364
           IFII GP YMKT+LGFSIQ NG+L+G PF+CSY SSV FCY+AD L  R I+SLTN+RKV
Sbjct: 306 IFIISGPMYMKTVLGFSIQANGVLSGLPFICSYFSSVAFCYIADVLITRQILSLTNVRKV 365

Query: 365 FTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPIL 424
           FTA SQV P ++++LIGYLGC++ LVL+ WFVAVTLITA+YAGAMAN+VDI PNFAGPIL
Sbjct: 366 FTASSQVAPGIMLVLIGYLGCDIVLVLVVWFVAVTLITAAYAGAMANIVDIAPNFAGPIL 425

Query: 425 AFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP 484
           AFAQTIHM+ASFLSP+VAG   Q+ + +L++WRQVF +   V   TY  YQ+ GT +VQP
Sbjct: 426 AFAQTIHMSASFLSPIVAGLLTQESQ-ALDAWRQVFGVTACVACATYIVYQIFGTGDVQP 484

Query: 485 WNQLKPATGSPRN--------NKSPEQKP------------FICEDGRRASIVKSNGTTS 524
           WN   P    P++        N+SP++              F  + G+     K N    
Sbjct: 485 WNY--PDQKYPQSVQEDSQPLNESPQKNGKIVTVTILASDVFARKAGKEVESKKRNEKKK 542

Query: 525 HDVD 528
            DV+
Sbjct: 543 RDVE 546

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020478|gb|EGI60893.1| Vesicular glutamate transporter 3 [Acromyrmex echinatior]

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/484 (64%), Positives = 382/484 (78%), Gaps = 18/484 (3%)

Query: 5   LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSN-SSQPYCY 63
           L +  D +PARVVLYM+SF+GFLVSFMMRTDINIAMVAM K  S ++N  +  +SQ  CY
Sbjct: 22  LRKLGDMIPARVVLYMLSFSGFLVSFMMRTDINIAMVAMAKLPSTSDNETAVVTSQ--CY 79

Query: 64  VATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVG 123
             +          +  L N T++  +P   + GEF+W  T Q  ILSSFYWCYILSQ++G
Sbjct: 80  TISN---------TSYLENTTVI--RPE--DAGEFEWSPTIQSTILSSFYWCYILSQMLG 126

Query: 124 GVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV 183
           GVLTQ FGTK +FG SQ +TA+CSLL+P AA +HYGA+IALRSIQG ASGLTWPAMYA++
Sbjct: 127 GVLTQYFGTKIIFGGSQAITAVCSLLMPTAAEIHYGAIIALRSIQGFASGLTWPAMYAVI 186

Query: 184 GHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL 243
           GHWIP  ERSRFMSSFQGFS GIGLTYPLC F+IAH+GWR VFYTTG++  +WC+ W+  
Sbjct: 187 GHWIPPVERSRFMSSFQGFSIGIGLTYPLCAFIIAHFGWRIVFYTTGTISLVWCIFWYLC 246

Query: 244 AFDAPLKHPRITRKELDYIQENIEPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWV 302
           AFD P  HPRI++ EL YIQE +   ++G+ + L VPW SILTS  AWAIGITTFGRIW+
Sbjct: 247 AFDTPALHPRISKPELQYIQECVRNQVIGADEDLPVPWKSILTSWSAWAIGITTFGRIWI 306

Query: 303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIR 362
           HY+FIIPGP YMKT+LGFSIQTNG+L+GAPF+CSYLSSV+FCY+AD L  R IM+L  +R
Sbjct: 307 HYVFIIPGPMYMKTVLGFSIQTNGILSGAPFICSYLSSVVFCYIADLLVTRQIMTLITVR 366

Query: 363 KVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGP 422
           K+FTA+SQV+P +LV+LIGYLGC+V LVLI WF+AVTLITA YAGAMAN+VDI PNFAGP
Sbjct: 367 KIFTALSQVVPGILVVLIGYLGCDVILVLIVWFIAVTLITAGYAGAMANIVDIAPNFAGP 426

Query: 423 ILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482
           +LAFAQTIHMTASFLSP+ AG   Q+ + SL+SWR+VF +   V   TY  YQ+ GT+++
Sbjct: 427 VLAFAQTIHMTASFLSPIAAGLLTQESQ-SLDSWRRVFAVTAGVSCSTYIAYQIFGTADI 485

Query: 483 QPWN 486
           Q WN
Sbjct: 486 QAWN 489

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847631|ref|XP_003699456.1| PREDICTED: vesicular glutamate transporter 2-like [Megachile rotundata]

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/483 (65%), Positives = 382/483 (79%), Gaps = 15/483 (3%)

Query: 5   LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYV 64
           L +  D VPARVVLYM+SF+GF VSFMMR DINIAMVAMVK  S+ +++N   +  +CYV
Sbjct: 21  LRKLRDMVPARVVLYMLSFSGFTVSFMMRNDINIAMVAMVKPPSSTSDTNVPMTSHHCYV 80

Query: 65  ATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGG 124
              P  S   N + +   D           +GEFDW  T Q AI  SFYWCYILSQVVGG
Sbjct: 81  T--PNVSLVNNSTPIRLED-----------QGEFDWSPTIQSAISGSFYWCYILSQVVGG 127

Query: 125 VLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184
           VLTQ FGTKTVFG SQL+TA+CSLL+P AA +HYG +IALRSIQGIASGLTWPAMYA+VG
Sbjct: 128 VLTQYFGTKTVFGGSQLITAVCSLLMPSAAGIHYGVMIALRSIQGIASGLTWPAMYAIVG 187

Query: 185 HWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           HWIP  ERSRFMSSFQGFSFGIG+TYPLCGF+IAH+GWR+VFYTTGS+G +WC+ W+F A
Sbjct: 188 HWIPPVERSRFMSSFQGFSFGIGITYPLCGFIIAHFGWRAVFYTTGSIGMLWCLFWYFFA 247

Query: 245 FDAPLKHPRITRKELDYIQENIEPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVH 303
           FD P  HPRI+++EL YIQ ++   + G+ + + VPW SIL S PAW+IGITTFGRIWVH
Sbjct: 248 FDTPASHPRISQQELRYIQGSVGNQVHGTNESMPVPWGSILRSWPAWSIGITTFGRIWVH 307

Query: 304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRK 363
           YIFII GP YMKT+LGFSIQ NG+L+G PF+CSY SSV FCY+AD L  R I+SLTN+RK
Sbjct: 308 YIFIISGPMYMKTVLGFSIQANGVLSGLPFICSYFSSVAFCYVADVLVTRQILSLTNVRK 367

Query: 364 VFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPI 423
           VFTA+SQV+P ++++LIGYLGC++ LVL+ WF+AVTLITA+YAGAMAN+VDI PNFAGPI
Sbjct: 368 VFTALSQVVPGIMLVLIGYLGCDIVLVLVVWFIAVTLITAAYAGAMANIVDIAPNFAGPI 427

Query: 424 LAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQ 483
           LAFAQTIHM+ASFLSP+VAG   Q  + +L++WRQVF +   V   TY  YQ+ GT ++Q
Sbjct: 428 LAFAQTIHMSASFLSPVVAGLLTQKSQ-ALDAWRQVFGVTACVACATYVVYQICGTGDIQ 486

Query: 484 PWN 486
            WN
Sbjct: 487 AWN 489

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777636|ref|XP_394525.4| PREDICTED: vesicular glutamate transporter 2-like [Apis mellifera]

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/482 (65%), Positives = 379/482 (78%), Gaps = 16/482 (3%)

Query: 5   LGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYV 64
           L +  D VPARVVLYM+SF+GF VSFMMR DINIAMVAMVK  S  +++N   +  +CYV
Sbjct: 21  LRKLRDMVPARVVLYMLSFSGFTVSFMMRNDINIAMVAMVKPPSMTSDTNVTVTSQHCYV 80

Query: 65  ATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGG 124
              P T         + N++  ++   + ++GEFDW  T Q AI  SFYWCYILSQVVGG
Sbjct: 81  T--PPT---------IINNSAPIK---LEDQGEFDWSPTIQSAISGSFYWCYILSQVVGG 126

Query: 125 VLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184
           VLTQ FGTK +FG SQL+TAICSLL+P AA +HYG +IALRSIQG+ASGLTWPAMYA+VG
Sbjct: 127 VLTQYFGTKAIFGGSQLITAICSLLMPSAAGIHYGFMIALRSIQGVASGLTWPAMYAIVG 186

Query: 185 HWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           HWIP  ERSRFMSSFQGFSFGIGLTYPLCGF+IAH+GWR+VFYTTGS+G IWC  W+F A
Sbjct: 187 HWIPPVERSRFMSSFQGFSFGIGLTYPLCGFIIAHFGWRAVFYTTGSIGMIWCFFWYFFA 246

Query: 245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHY 304
           FD P  HPRI+++EL YIQ ++    V  + + VPW  ILTS PAW+IGITTFGRIWVHY
Sbjct: 247 FDTPASHPRISQQELRYIQGSV-GNQVRDENMPVPWRFILTSWPAWSIGITTFGRIWVHY 305

Query: 305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKV 364
           IFII GP YMKT+LGFSIQ NG+L+G PF+CSY SSV FCY+AD L  R I+SLTN+RKV
Sbjct: 306 IFIISGPMYMKTVLGFSIQANGVLSGLPFICSYFSSVAFCYIADVLITRQILSLTNVRKV 365

Query: 365 FTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPIL 424
           FT  SQV P ++++LIGYLGC++ LVL+ WFVAVTLITASYAGAMAN+VDI PNFAGPIL
Sbjct: 366 FTVSSQVAPGIMLVLIGYLGCDIVLVLVVWFVAVTLITASYAGAMANIVDIAPNFAGPIL 425

Query: 425 AFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP 484
           AF QTIHMTASFLSP+VAG   Q+ + +L++WRQVF +   V   TY  YQ+ GT ++QP
Sbjct: 426 AFTQTIHMTASFLSPIVAGLLTQESQ-ALDAWRQVFGVTACVACATYIVYQIFGTGDIQP 484

Query: 485 WN 486
           WN
Sbjct: 485 WN 486

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785502|gb|EFZ12171.1| hypothetical protein SINV_11370 [Solenopsis invicta]

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/524 (61%), Positives = 394/524 (75%), Gaps = 22/524 (4%)

Query: 4   DLGRFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCY 63
           +L +  D VPARVVLY++SF+GFLVSFMMRTDINIAMVAM K  SN       S   +CY
Sbjct: 15  NLRKLGDMVPARVVLYILSFSGFLVSFMMRTDINIAMVAMAKLPSNNETVAVTS---HCY 71

Query: 64  VATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVG 123
                       VS   + +   + +P   E GEF+W    Q AILSSFYWCYILSQ++G
Sbjct: 72  -----------TVSNASYMENTTVIRPE--EAGEFEWSPAIQSAILSSFYWCYILSQMLG 118

Query: 124 GVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV 183
           G+LTQ FGTKT+FG SQ+VTA+CSLL+P AA +HYGA+IALRSIQGIASGLTWPAMYA++
Sbjct: 119 GILTQYFGTKTIFGGSQVVTAVCSLLMPTAAEIHYGAMIALRSIQGIASGLTWPAMYAVI 178

Query: 184 GHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL 243
           GHWIP  ERSRFMSSFQGFS GIGLTYPLC F+I++ GWR+VFYTTG++G +WC+ W+F 
Sbjct: 179 GHWIPPVERSRFMSSFQGFSIGIGLTYPLCAFIISYLGWRAVFYTTGTVGLVWCIFWYFY 238

Query: 244 AFDAPLKHPRITRKELDYIQENIEPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWV 302
           AFD P  HPRI+R EL YIQE +   ++G+ + L VPW SILTS PAWAIGITTFGRIWV
Sbjct: 239 AFDTPALHPRISRSELRYIQECVRNQVIGANEDLPVPWKSILTSLPAWAIGITTFGRIWV 298

Query: 303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIR 362
           HY+FIIPGP YMKT+LGFSI+ NG+L+GAPF+CSYLSSV+FCY+AD L  R IM+L  +R
Sbjct: 299 HYVFIIPGPMYMKTVLGFSIEANGILSGAPFICSYLSSVVFCYVADLLVTRQIMTLITVR 358

Query: 363 KVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGP 422
           K+FT++SQV+P +LV+LIGYLGC++ LVLI WF+AVTLITA YAGAMAN+VDI PNFAGP
Sbjct: 359 KIFTSLSQVVPGILVILIGYLGCDIILVLIVWFIAVTLITAGYAGAMANIVDIAPNFAGP 418

Query: 423 ILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV 482
           +LAFAQTIHMTASFLSP+ AG   Q+ + SL+SWR+VF +   V   TY  YQ+ GT+++
Sbjct: 419 VLAFAQTIHMTASFLSPIAAGLLTQESQ-SLDSWRKVFAVTAGVSCSTYIAYQLFGTADI 477

Query: 483 QPWNQLKPATGSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHD 526
           Q WN   P    P++    E  P      ++  IV S    S  
Sbjct: 478 QAWNY--PDQKYPQSMG--EDSPLNSSLQKKGEIVPSRKNPSDQ 517

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485012|ref|XP_001605572.2| PREDICTED: vesicular glutamate transporter 2-like [Nasonia vitripennis]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/507 (63%), Positives = 386/507 (76%), Gaps = 36/507 (7%)

Query: 12  VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNAN-------NSNSNSSQPYCYV 64
           +PARVVLYM+SF+GF+VSFMMR DIN+AMV+MVK+ S+ N       +S SNS+      
Sbjct: 2   IPARVVLYMLSFSGFVVSFMMRMDINLAMVSMVKYASSDNVSIILTCDSESNSTAQ---- 57

Query: 65  ATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGG 124
           A E   S++                     EGEFDW    Q  I+ SFYWCYILSQVVGG
Sbjct: 58  AMEGDNSSKTE-----------------RAEGEFDWSPAIQSTIIGSFYWCYILSQVVGG 100

Query: 125 VLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG 184
           VLTQ FGTKTVFG SQL+TAICSLLIP AA  HYGA+IALRSIQG+ASGLTWPAMYA+VG
Sbjct: 101 VLTQYFGTKTVFGGSQLLTAICSLLIPTAAEFHYGAIIALRSIQGVASGLTWPAMYAIVG 160

Query: 185 HWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           HWIP  ERSRFMSSFQGFSFGIG+TYPL GFLIAH+GWR+VFYTTGS+GA+WCV W+F A
Sbjct: 161 HWIPVVERSRFMSSFQGFSFGIGITYPLAGFLIAHFGWRTVFYTTGSIGALWCVFWYFFA 220

Query: 245 FDAPLKHPRITRKELDYIQENIEPTIVG-SKGLKVPWVSILTSPPAWAIGITTFGRIWVH 303
           FD P  HPRI+ +E  YIQ ++       S+G KVPW SILTS PAW+IGITTFGRIWVH
Sbjct: 221 FDTPSSHPRISSQEFQYIQGSVGTVATDLSEGTKVPWKSILTSWPAWSIGITTFGRIWVH 280

Query: 304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRK 363
           Y+FII GP Y+KT+LG SIQ NG+L+GAPF+CSY SSV+FC++AD L  + I+SLTN+RK
Sbjct: 281 YVFIIAGPMYIKTVLGLSIQANGILSGAPFICSYFSSVVFCWVADLLVRKQILSLTNVRK 340

Query: 364 VFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPI 423
           +FTA+SQV+P +LV+LIGYLGCN+ + L+ WF+AVTLITA+YAGAMAN+VDI PNFAGP+
Sbjct: 341 IFTALSQVVPGILVLLIGYLGCNIVMSLLIWFIAVTLITAAYAGAMANIVDIAPNFAGPV 400

Query: 424 LAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQ 483
           LAFAQTIHMTASF+SP+VAG   Q+ + SL++WR+VF +   V   TY  YQ+ GT+++Q
Sbjct: 401 LAFAQTIHMTASFVSPIVAGLLTQESQ-SLDAWRKVFGVTACVACGTYVVYQIFGTADIQ 459

Query: 484 PWN---QLKPAT---GSPRNNKSPEQK 504
           PWN   Q  P +    S   N SP  K
Sbjct: 460 PWNYPDQKYPQSVVEDSQPLNDSPSHK 486

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	534
FB|FBgn0058263	505	MFS17 "Major Facilitator Super	0.771	0.815	0.570	2.5e-147
FB|FBgn0016684	524	NaPi-T "Na[+]-dependent inorga	0.945	0.963	0.342	4.1e-81
FB|FBgn0031645	493	CG3036 [Drosophila melanogaste	0.754	0.817	0.367	6.7e-75
FB|FBgn0030452	559	MFS10 "Major Facilitator Super	0.443	0.423	0.350	2.5e-73
UNIPROTKB|Q9NRA2	495	SLC17A5 "Sialin" [Homo sapiens	0.735	0.793	0.350	2.9e-70
UNIPROTKB|E2R8R4	495	SLC17A5 "Uncharacterized prote	0.728	0.785	0.346	2.9e-70
MGI|MGI:2156052	582	Slc17a6 "solute carrier family	0.842	0.773	0.317	6e-70
RGD|620531	582	Slc17a6 "solute carrier family	0.842	0.773	0.317	6e-70
UNIPROTKB|E1B7R3	495	SLC17A5 "Uncharacterized prote	0.728	0.785	0.351	9.8e-70
UNIPROTKB|A6QLI1	582	SLC17A6 "Vesicular glutamate t	0.760	0.697	0.334	9.8e-70

FB|FBgn0058263 MFS17 "Major Facilitator Superfamily Transporter 17" [Drosophila melanogaster (taxid:7227)]

 Score = 1332 (473.9 bits), Expect = 2.5e-147, Sum P(2) = 2.5e-147
 Identities = 240/421 (57%), Positives = 317/421 (75%)

Query:    86 LLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAI 145
             L++   +   G  D  T  +  ++SSFYWCY+LSQVVGGV T+ FGTK VFG+SQL TA+
Sbjct:    76 LIKSQQILGTGTDDQKTIVKSVVISSFYWCYVLSQVVGGVATELFGTKCVFGWSQLATAL 135

Query:   146 CSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFG 205
             CS ++P AA LHY A+I LRSIQG ASGLTWPAMYA+VG+WIP  ERSRFMSSFQGFS G
Sbjct:   136 CSFMMPSAAQLHYIAVIVLRSIQGFASGLTWPAMYAIVGYWIPLTERSRFMSSFQGFSIG 195

Query:   206 IGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQEN 265
             IGLTYPLCGF+++ +GW  +FYTTG+LG  WC+ W+ LAF+ P +HPRIT+ EL+YI+ N
Sbjct:   196 IGLTYPLCGFILSEWGWPYIFYTTGTLGLGWCILWYLLAFNTPREHPRITKDELNYIELN 255

Query:   266 IEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTN 325
             ++  +  S  +KVPW+ I  S PAWAI ITTFGRI+VHYIFI+ GP +M  +L F+ +TN
Sbjct:   256 VKKEVNSSVKVKVPWLQIFKSIPAWAIAITTFGRIFVHYIFIVNGPTFMGNVLKFNFETN 315

Query:   326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC 385
             G L+G PF+CSY+SSVLFCY+AD++    ++ LTN+RKVFTA+SQ+IP +L+  IGY+  
Sbjct:   316 GFLSGVPFICSYISSVLFCYIADKIVFYKVLCLTNVRKVFTALSQIIPGVLIYCIGYID- 374

Query:   386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNF--AGPILAFAQTIHMTASFLSPMVAG 443
             NV ++L  WF+AV  ITASYAGAMAN++D+ PN+  +  +LAF QTIHM+ASF+SP+ AG
Sbjct:   375 NVYILLTVWFIAVIFITASYAGAMANIIDLAPNYGHSAAVLAFCQTIHMSASFISPLTAG 434

Query:   444 YFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKPATGSPRNNKSPEQ 503
              F+   E S++ WR+VF ++  +   TY FYQ+ GT+E+Q WN+     G P N+ S E 
Sbjct:   435 -FIVTQEDSIDQWRRVFEVSAIISILTYLFYQLFGTAEIQTWNK-----GLPVNDDSDEG 488

Query:   504 K 504
             K
Sbjct:   489 K 489

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0016684 NaPi-T "Na[+]-dependent inorganic phosphate cotransporter" [Drosophila melanogaster (taxid:7227)]

 Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
 Identities = 182/531 (34%), Positives = 284/531 (53%)

Query:    12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQXXXXXXXXXXXQPYCYVATEPGTS 71
             V AR VL+ M+F GF+V++M+R ++NI +V M+  +                 +T+   +
Sbjct:     4 VEARTVLWYMTFIGFIVNYMIRINLNITIVDMIAGKGAITSNETHEN------STD--LA 55

Query:    72 ARGNVSELLFNDTMLLEKPNVN-EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF 130
             A   ++E    +   L+  N+  E+  F W+   QGA+L SF+W +   Q+ GG+L  ++
Sbjct:    56 ALAEMNERFSLERWFLDWANIPYEKNGFHWNEKQQGALLGSFFWAHWTLQIPGGILATKY 115

Query:   131 GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSN 190
             GTK VFG+S  +   C  LIP  +   Y  LI LR  QG  +GL WP+M+ L   WIP N
Sbjct:   116 GTKLVFGWSNGIGVFCCFLIPIVSYWSYTGLIILRVFQGWITGLAWPSMHVLTAKWIPPN 175

Query:   191 ERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK 250
             ERS+F+S++ G S G+ L YP+ G++I    W  V+Y  G +G +W +AW FL FD+P +
Sbjct:   176 ERSKFVSAYLGSSVGVALFYPIFGYIIDWTRWEWVYYICGIVGTLWFIAWQFLVFDSPAE 235

Query:   251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPG 310
             HPRI   E  +I++++  +I GSKG   PW +I TS P W   +  +G IW  +  +   
Sbjct:   236 HPRIADSERKFIEKSLGASIQGSKG-PTPWKAIATSRPVWLNVVAQWGGIWGLFTLMTHA 294

Query:   311 PRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ 370
             P Y + I  ++I+  G L+G P L   L + +F   AD L   + MS TN+RK+ T I  
Sbjct:   295 PTYFRLIHHWNIRATGFLSGLPHLMRMLFAYVFSIFADYLLRTDKMSRTNVRKLATFICC 354

Query:   371 VIPALLVMLIGYLGCNV--ALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQ 428
                 L+V+ + Y G N   A+VL+T  VA  L  A  +G +A++VD+ PN+AG +L  + 
Sbjct:   355 GTKGLIVLALAYFGYNATAAIVLVT--VATMLHGAVSSGPLASMVDLSPNYAGIVLGVSG 412

Query:   429 TIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQ- 487
              I     F+SP + G    +++T +++W+ VFL+   + + +   Y +   S++QPWN  
Sbjct:   413 MIGGMPGFISPFIVGQLTHNNQT-IDAWKNVFLLTSLMLTGSGILYVLFSESKLQPWNSG 471

Query:   488 --------LKPATGSPRNNKSPEQK-PFICEDGRRASIVKSNGT-TSHDVD 528
                     LK      R+    E+K P   +  +   IV    T T  D D
Sbjct:   472 CHQLPDSGLKELQNLGRDQDDEEEKKPLKSDHDKETPIVAEQETKTKSDCD 522

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS;NAS

GO:0035435 "phosphate ion transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0031645 CG3036 [Drosophila melanogaster (taxid:7227)]

 Score = 707 (253.9 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
 Identities = 149/405 (36%), Positives = 222/405 (54%)

Query:    82 NDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQL 141
             N T   +  +V EE  F WD+     +L  F+W YIL+++ GG L +  G + VFG S L
Sbjct:    68 NSTASPDGVDVYEE-RFPWDSYQTNFVLGCFFWGYILTELPGGRLAELIGGRRVFGHSML 126

Query:   142 VTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQG 201
               ++ +L+ P AA ++Y  LI +R + G   G +WPA++ +   WIP  ERS+FMS+   
Sbjct:   127 WASLLTLITPLAAHINYVVLIVVRVVLGFMLGASWPAIHPVAAVWIPPMERSKFMSNMMA 186

Query:   202 FSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDY 261
              S G  +T P+CG+LI+  GW SVFY TG++G +W +AW+   ++ P  HPRI+ +E   
Sbjct:   187 SSLGAAITMPICGYLISVAGWASVFYLTGAVGLLWSLAWFTFVYETPATHPRISAEERRE 246

Query:   262 IQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFS 321
             I+E I  T    +   VPW  +L SP  WAI I     ++  +  +   P +M  IL F 
Sbjct:   247 IEEAIGTTTSKKRPSHVPWGQLLCSPAVWAIIICHGLAVFGFFTVVNQLPTFMSKILHFD 306

Query:   322 IQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG 381
             I+ NGL +  P+L  Y+ +V   YLAD L  +  +S T  RK+FT  + VIP LL+++  
Sbjct:   307 IKQNGLFSSLPYLGKYVMAVASSYLADYLRKKGTLSTTATRKLFTTFALVIPGLLMIVQV 366

Query:   382 YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMV 441
             +LG +    +  + +A+    A  AG + N +DI PNF G I   A T+     FLS  +
Sbjct:   367 FLGYDATWSVTIFSLALFAHGAVTAGYLGNGLDIAPNFGGTIFGLANTLSSFGGFLSTSM 426

Query:   442 AGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWN 486
              G     D+ S  SW+ VF I  A        + +LG+ E+QPWN
Sbjct:   427 VGALTYKDQ-SFHSWQIVFWILAATYISAAVVFAILGSGELQPWN 470

GO:0005436 "sodium:phosphate symporter activity" evidence=ISS

GO:0006817 "phosphate ion transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

FB|FBgn0030452 MFS10 "Major Facilitator Superfamily Transporter 10" [Drosophila melanogaster (taxid:7227)]

 Score = 432 (157.1 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
 Identities = 90/257 (35%), Positives = 145/257 (56%)

Query:    15 RVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQXXXXXXXXXXXQPYCYVATEPGTSARG 74
             R +   M F GF V + MR ++++A+VAMV                 C     P  +   
Sbjct:    68 RHIFGFMGFLGFAVVYAMRVNLSVAIVAMVNQTAIPHSNSSVIDTDTC-----PLPAPHH 122

Query:    75 NVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKT 134
             N S+           PN  +EGEF WD  TQG +L SF++ Y+L+QV GG + + +G K 
Sbjct:   123 NGSD-----------PNPQKEGEFVWDEATQGLVLGSFFYGYVLTQVPGGRMAELYGGKK 171

Query:   135 VFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSR 194
             ++G+  L+TA+ +L+ P AA      L+ +R ++G+  G+T+PAM+A++ HWIP  ER++
Sbjct:   172 IYGYGVLITAVFTLITPLAAHWDLPLLVLVRILEGMGEGVTYPAMHAMLAHWIPPLERNK 231

Query:   195 FMSS-FQGFSFGIGLTYPLCGFLIA-HY--GWRSVFYTTGSLGAIWCVAWWFLAFDAPLK 250
             F +  + G + G  ++ PL G+L +  +  GW S FY  G LG +W +AW +L +D P  
Sbjct:   232 FAAIVYAGSNIGTVISMPLAGWLCSLDFLGGWPSAFYIFGLLGILWFIAWMYLVYDKPSD 291

Query:   251 HPRITRKELDYIQENIE 267
             HPRI+  E +YI+ +++
Sbjct:   292 HPRISESEREYIERSLQ 308

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NRA2 SLC17A5 "Sialin" [Homo sapiens (taxid:9606)]

 Score = 669 (240.6 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
 Identities = 140/399 (35%), Positives = 217/399 (54%)

Query:    89 KPNVNEEGE-FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICS 147
             K + N+ G+ + WD  TQG IL SF++ YI++Q+ GG +  + G K + GF  L TA+ +
Sbjct:    91 KVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGILGTAVLT 150

Query:   148 LLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGI 206
             L  P AA L  G LI LR+++G+  G+T+PAM+A+   W P  ERS+ +S S+ G   G 
Sbjct:   151 LFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGT 210

Query:   207 GLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENI 266
              ++ PL G +  +  W  VFY  G++G  W + W +L  D P KH RI+  E +YI  ++
Sbjct:   211 VISLPLSGIICYYMNWTYVFYFFGTIGIFWFLLWIWLVSDTPQKHKRISHYEKEYILSSL 270

Query:   267 EPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG 326
                +   K   VPWV IL S P WAI +  F   W  Y  +   P YMK IL F++Q NG
Sbjct:   271 RNQLSSQKS--VPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENG 328

Query:   327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN 386
              L+  P+L S+L  +L    AD L  +   S   +R++F+ I  + PA+ ++  G++GC+
Sbjct:   329 FLSSLPYLGSWLCMILSGQAADNLRAKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCD 388

Query:   387 VALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFL 446
              +L +    ++ TL     +G   N +DI P++AG +L    T       + P++A    
Sbjct:   389 YSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLT 448

Query:   447 QDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
              D+  ++  W+ VF IA A+      F+ +    EVQ W
Sbjct:   449 PDN--TVGEWQTVFYIAAAINVFGAIFFTLFAKGEVQNW 485

GO:0006865 "amino acid transport" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0030672 "synaptic vesicle membrane" evidence=IEA

GO:0016020 "membrane" evidence=TAS

GO:0005351 "sugar:hydrogen symporter activity" evidence=TAS

GO:0005765 "lysosomal membrane" evidence=IDA;TAS

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006820 "anion transport" evidence=TAS

GO:0006811 "ion transport" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|E2R8R4 SLC17A5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 668 (240.2 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
 Identities = 137/395 (34%), Positives = 216/395 (54%)

Query:    93 NEEGE-FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP 151
             N+ G+ + WD  TQG IL SF++ YI++Q+ GG +  + G K + GF  L TA+ +L  P
Sbjct:    95 NQTGKRYQWDAETQGWILGSFFYGYIITQIPGGYIASKVGGKLLLGFGILGTAVFTLFTP 154

Query:   152 QAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTY 210
              AA    GALI LR+++G+  G+T+PAM+A+   W P  ERS+ +S S+ G   G  ++ 
Sbjct:   155 IAADFGVGALIVLRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVISL 214

Query:   211 PLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTI 270
             PL G +  +  W  VFY  G +G IW + W FL  + P  H  I+R+E +YI  +++  +
Sbjct:   215 PLSGIICFYMNWTYVFYLFGIVGIIWFILWIFLVSETPETHKTISRQEKEYILSSLKNQL 274

Query:   271 VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330
                K   VPW+ +L S P WAI +  F   W  Y  +   P YMK IL F++Q NGLL+ 
Sbjct:   275 SSQKS--VPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGLLSA 332

Query:   331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALV 390
              P+   +L  +L    AD L  +   S   +R+VF+ I  + PA+ ++  G++GC+ +L 
Sbjct:   333 LPYFGCWLCMILSGQAADNLRAKWNFSTICVRRVFSLIGMIGPAVFLVAAGFIGCDYSLA 392

Query:   391 LITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDE 450
             ++   ++ TL     +G   N +DI P++AG +L    T       + P++A     D+ 
Sbjct:   393 VVFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDN- 451

Query:   451 TSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
              ++  W+ VF IA A+      F+ +    EVQ W
Sbjct:   452 -TIREWQTVFYIAAAINVFGAIFFSLFAKGEVQNW 485

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2156052 Slc17a6 "solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6" [Mus musculus (taxid:10090)]

 Score = 659 (237.0 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
 Identities = 147/463 (31%), Positives = 241/463 (52%)

Query:    76 VSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTV 135
             + +++ N T+      + E+ +F+WD  T G I  SF+W YI++Q+ GG +  R     V
Sbjct:    95 IVDMVNNSTIHRGGKVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRV 154

Query:   136 FGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRF 195
             FG + L+T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  ERSR 
Sbjct:   155 FGAAILLTSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRL 214

Query:   196 MS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRI 254
              + SF G   G  +  PL G L+ + GW SVFY  GS G +W + W  +++++P KHP I
Sbjct:   215 ATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTI 274

Query:   255 TRKELDYIQENI--EPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGP 311
             T +E  YI+E+I     ++G+ +  K PW    TS P +AI +  F R W  Y+ +I  P
Sbjct:   275 TDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQP 334

Query:   312 RYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV 371
              Y + + GF I   G+L+  P L   +   +   +AD L  + I+S T +RK+       
Sbjct:   335 AYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFG 394

Query:   372 IPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILAFAQTI 430
             + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++  +  +
Sbjct:   395 MEATLLLVVGY--SHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISDGV 452

Query:   431 HMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKP 490
                +  + P++ G   ++   S E W+ VFLIA  V      FY +  + E QPW   + 
Sbjct:   453 GTLSGMVCPIIVGAMTKNK--SREEWQYVFLIAALVHYGGVIFYALFASGEKQPWADPEE 510

Query:   491 AT----GSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHDVDG 529
              +    G    ++  E+   I ++       KS G TS +  G
Sbjct:   511 TSEEKCGFIHEDELDEETGDITQNYINYGTTKSYGATSQENGG 553

GO:0001504 "neurotransmitter uptake" evidence=IDA

GO:0003333 "amino acid transmembrane transport" evidence=IDA

GO:0005313 "L-glutamate transmembrane transporter activity" evidence=ISO;IDA

GO:0005769 "early endosome" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006836 "neurotransmitter transport" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0015293 "symporter activity" evidence=IEA

GO:0015807 "L-amino acid transport" evidence=IDA

GO:0015813 "L-glutamate transport" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

RGD|620531 Slc17a6 "solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6" [Rattus norvegicus (taxid:10116)]

 Score = 659 (237.0 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
 Identities = 147/463 (31%), Positives = 241/463 (52%)

Query:    76 VSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTV 135
             + +++ N T+      + E+ +F+WD  T G I  SF+W YI++Q+ GG +  R     V
Sbjct:    95 IVDMVNNSTIHRGGKVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRV 154

Query:   136 FGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRF 195
             FG + L+T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  ERSR 
Sbjct:   155 FGAAILLTSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRL 214

Query:   196 MS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRI 254
              + SF G   G  +  PL G L+ + GW SVFY  GS G +W + W  +++++P KHP I
Sbjct:   215 ATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPTI 274

Query:   255 TRKELDYIQENI--EPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGP 311
             T +E  YI+E+I     ++G+ +  K PW    TS P +AI +  F R W  Y+ +I  P
Sbjct:   275 TDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQP 334

Query:   312 RYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV 371
              Y + + GF I   G+L+  P L   +   +   +AD L  + I+S T +RK+       
Sbjct:   335 AYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFG 394

Query:   372 IPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILAFAQTI 430
             + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++  +  +
Sbjct:   395 MEATLLLVVGY--SHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGV 452

Query:   431 HMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLKP 490
                +  + P++ G   ++   S E W+ VFLIA  V      FY +  + E QPW   + 
Sbjct:   453 GTLSGMVCPIIVGAMTKNK--SREEWQYVFLIAALVHYGGVIFYALFASGEKQPWADPEE 510

Query:   491 AT----GSPRNNKSPEQKPFICEDGRRASIVKSNGTTSHDVDG 529
              +    G    ++  E+   I ++       KS G TS +  G
Sbjct:   511 TSEEKCGFIHEDELDEETGDITQNYINYGTTKSYGATSQENGG 553

GO:0001504 "neurotransmitter uptake" evidence=IEA;ISO;TAS

GO:0003333 "amino acid transmembrane transport" evidence=ISO

GO:0005313 "L-glutamate transmembrane transporter activity" evidence=IEA;ISO;IDA

GO:0005769 "early endosome" evidence=IDA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA;ISO;TAS

GO:0015293 "symporter activity" evidence=IEA

GO:0015807 "L-amino acid transport" evidence=ISO

GO:0015813 "L-glutamate transport" evidence=ISO;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0030672 "synaptic vesicle membrane" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

UNIPROTKB|E1B7R3 SLC17A5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 661 (237.7 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
 Identities = 139/395 (35%), Positives = 213/395 (53%)

Query:    93 NEEGE-FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP 151
             N+ G+ + WD  TQG IL SF++ YI++Q+ GG +  R G K + GF  L TA+ +L  P
Sbjct:    95 NQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASRSGGKLLLGFGVLGTAVFTLFTP 154

Query:   152 QAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTY 210
              AA   +GAL+ALR+++G+  G+T+PAM+A+   W P  ERS+ +S S+ G   G  ++ 
Sbjct:   155 LAADFGFGALVALRALEGLGEGVTFPAMHAMWSSWAPPLERSKLLSISYAGAQLGTVVSL 214

Query:   211 PLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTI 270
             PL G +  +  W  VFY  G +G IW + W  L  D P  H  IT  E +YI  +++  +
Sbjct:   215 PLSGVICYYMNWTYVFYFFGLVGIIWFILWICLVSDTPETHKTITPYEKEYILSSLKNQL 274

Query:   271 VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330
                K   VPW+ +L S P WAI +  F   W  Y  +   P YMK +L F+IQ NG L+ 
Sbjct:   275 SSQKS--VPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEVLRFNIQENGFLSA 332

Query:   331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALV 390
              P+L  +L  +L    AD L  R   S   +R+VF+ I  + PA+ ++  G++GC+ +L 
Sbjct:   333 VPYLGCWLCMILSGQAADNLRARWNFSTLWVRRVFSLIGMIGPAIFLVAAGFIGCDYSLA 392

Query:   391 LITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDE 450
             +    ++ TL     +G   N +DI P++AG +L    T       + P++A       E
Sbjct:   393 VAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMIGPIIARSLTP--E 450

Query:   451 TSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
              ++  W+ VF IA A+      F+ +    EVQ W
Sbjct:   451 NTIGEWQTVFCIAAAINVFGAIFFTLFAKGEVQNW 485

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0015739 "sialic acid transport" evidence=IEA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A6QLI1 SLC17A6 "Vesicular glutamate transporter 2" [Bos taurus (taxid:9913)]

 Score = 657 (236.3 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
 Identities = 139/415 (33%), Positives = 224/415 (53%)

Query:    76 VSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTV 135
             + +++ N T+      + E+ +F+WD  T G I  SF+W YI++Q+ GG +  R     V
Sbjct:    95 IVDMVNNSTIHRGGKVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRV 154

Query:   136 FGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRF 195
             FG + L+T+  ++LIP AA +HYG +I +R +QG+  G+T+PA + +   W P  ERSR 
Sbjct:   155 FGAAILLTSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRL 214

Query:   196 MS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRI 254
              + SF G   G  +  PL G L+ + GW SVFY  GS G IW + W  +++++P KHP I
Sbjct:   215 ATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMIWYMFWLLVSYESPAKHPTI 274

Query:   255 TRKELDYIQENI--EPTIVGS-KGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGP 311
             T +E  YI+E+I     ++G+ +  K PW    TS P +AI +  F R W  Y+ +I  P
Sbjct:   275 TDEERRYIEESIGESANLLGAMEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQP 334

Query:   312 RYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV 371
              Y + + GF I   G+L+  P L   +   +   +AD L  + I+S T +RK+       
Sbjct:   335 AYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFG 394

Query:   372 IPALLVMLIGYLGCNVALVLITWFV-AVTLITASYAGAMANVVDIGPNFAGPILAFAQTI 430
             + A L++++GY   +   V I++ V AV     + +G   N +DI P +A  ++  +  +
Sbjct:   395 MEATLLLVVGY--SHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGV 452

Query:   431 HMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW 485
                +  + P++ G   ++   S E W+ VFLIA  V      FY +  + E QPW
Sbjct:   453 GTLSGMVCPIIVGAMTKNK--SREEWQYVFLIAALVHYGGVIFYAIFASGEKQPW 505

GO:0043005 "neuron projection" evidence=IEA

GO:0030672 "synaptic vesicle membrane" evidence=IEA

GO:0005313 "L-glutamate transmembrane transporter activity" evidence=IEA

GO:0001504 "neurotransmitter uptake" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015293 "symporter activity" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9NRA2	S17A5_HUMAN	No assigned EC number	0.3291	0.8352	0.9010	yes	N/A
A6QLI1	VGLU2_BOVIN	No assigned EC number	0.3207	0.8464	0.7766	yes	N/A
Q05B21	VGLU1_XENTR	No assigned EC number	0.3104	0.8389	0.7777	yes	N/A
Q8GX78	ANTR2_ARATH	No assigned EC number	0.3136	0.6966	0.6876	yes	N/A
Q652N5	PHT44_ORYSJ	No assigned EC number	0.3196	0.6928	0.6260	yes	N/A
Q03567	YLD2_CAEEL	No assigned EC number	0.3106	0.8520	0.9229	yes	N/A
Q8BLE7	VGLU2_MOUSE	No assigned EC number	0.3106	0.8970	0.8230	yes	N/A
Q9JI12	VGLU2_RAT	No assigned EC number	0.3106	0.8970	0.8230	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	534
TIGR00894	465	TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph	4e-75
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	6e-32
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	3e-28
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	1e-27
TIGR00881	379	TIGR00881, 2A0104, phosphoglycerate transporter fa	8e-27
COG2271	448	COG2271, UhpC, Sugar phosphate permease [Carbohydr	2e-19
TIGR00895	398	TIGR00895, 2A0115, benzoate transport	9e-10
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	2e-09
TIGR00898	505	TIGR00898, 2A0119, cation transport protein	6e-08
TIGR00711	485	TIGR00711, efflux_EmrB, drug resistance transporte	3e-07
TIGR00880	141	TIGR00880, 2_A_01_02, Multidrug resistance protein	4e-07
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	1e-06
pfam00083	449	pfam00083, Sugar_tr, Sugar (and other) transporter	6e-05
COG0477	338	COG0477, ProP, Permeases of the major facilitator	7e-05
PRK12382	392	PRK12382, PRK12382, putative transporter; Provisio	1e-04
COG2807	395	COG2807, CynX, Cyanate permease [Inorganic ion tra	1e-04
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	5e-04
COG2223	417	COG2223, NarK, Nitrate/nitrite transporter [Inorga	5e-04
PRK11551	406	PRK11551, PRK11551, putative 3-hydroxyphenylpropio	7e-04
PRK10473	392	PRK10473, PRK10473, multidrug efflux system protei	0.001
TIGR00710	385	TIGR00710, efflux_Bcr_CflA, drug resistance transp	0.003

>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter

 Score =  245 bits (626), Expect = 4e-75
 Identities = 132/480 (27%), Positives = 207/480 (43%), Gaps = 24/480 (5%)

Query: 10  DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPG 69
           + V A   L         +SF++     I +   +   S    +  N             
Sbjct: 2   ENVFASTKLPYFCSFRLFLSFLLHICNVIIIAQRICL-SLTMVAMVNKENSTDLACL--- 57

Query: 70  TSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR 129
             +  N  + + N               F W    QG ILSS ++  I+ Q+  G L  +
Sbjct: 58  --SAENELDNIKN-------------PNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK 102

Query: 130 FGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPS 189
           +  K   G    ++++ S++IP AA      ++  R IQG+A G   PA + ++  W P 
Sbjct: 103 YVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP 162

Query: 190 NERSRFMS-SFQGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFDA 247
            ERSR +  S  GF  G  +  P+ G+L   + GW  +FY  G +G  W + W+    D 
Sbjct: 163 KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222

Query: 248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI 307
           P  HP I++ E  YI  +++    GS    +P  +I  S P WAI    FG  W++ I  
Sbjct: 223 PSIHPCISKFEKKYINSSLQGQ-KGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILP 281

Query: 308 IPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA 367
              P ++  +L  S + NGLL+  P+L ++L S+   YLAD L     +SLT  RK+F  
Sbjct: 282 TYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNG 341

Query: 368 ISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFA 427
           I  + P +    + YL     L +I   +A  + +   AG + N +D+ P F G I    
Sbjct: 342 IGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGIT 401

Query: 428 QTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQ 487
                    ++  +AG  L  D  +   W  VFLI   V      FY + G++E Q W +
Sbjct: 402 GLPGFIGGLIASTLAGNILSQDSKN--VWLIVFLIMAFVNILCVIFYLIFGSAERQDWAK 459

[Transport and binding proteins, Anions]. Length = 465

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score =  126 bits (319), Expect = 6e-32
 Identities = 83/359 (23%), Positives = 135/359 (37%), Gaps = 23/359 (6%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL 156
           +        G + S+F W Y++ Q  GG L  RFG +       ++  + + L  QA   
Sbjct: 23  DLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGL--QAFAG 80

Query: 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGF 215
            Y +L  LR + G A    +P +  +V  W P++ER+  +S F      G  +  PL G+
Sbjct: 81  AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGW 140

Query: 216 LIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYI---QENIEPTIVG 272
           ++ H+ W+  F   G LG IW V W     D P +  +   +E  YI       E    G
Sbjct: 141 ILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPP-QKAKWLTEEEKYIVVGGLLAEQQGKG 199

Query: 273 SKGLKVPWV-SILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGA 331
               K   +  +L     W + +  F        F+   P Y+    G SI   G +   
Sbjct: 200 PSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASL 259

Query: 332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVL 391
           P +  ++  +L   L+D L  R        + +  A    I A LV+ +     N   V 
Sbjct: 260 PGIVGFIGMILGGRLSDLLLRRG-------KSLVFARKTAIIAGLVLSLLMFATN--YVN 310

Query: 392 ITW----FVAVTLITASYAGAMANVVD--IGPNFAGPILAFAQTIHMTASFLSPMVAGY 444
           I +     VA+             ++      N AG       ++      + P+V G 
Sbjct: 311 IPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGA 369

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score =  114 bits (288), Expect = 3e-28
 Identities = 77/346 (22%), Positives = 128/346 (36%), Gaps = 28/346 (8%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL 156
           +     T  G +L++F   Y L+Q + G L+ RFG + V     L+ A+  LL+      
Sbjct: 26  DLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLL--LFAS 83

Query: 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQ-GFSFGIGLTYPLCGF 215
               L+ LR +QG+  G  +PA  AL+  W P  ER R +     GF  G  L   L G 
Sbjct: 84  SLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEERGRALGLLSAGFGLGAALGPLLGGL 143

Query: 216 LIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKG 275
           L + +GWR+ F     L  +  V    L    P +  R    E              +  
Sbjct: 144 LASLFGWRAAFLILAILALLAAVLAALLLPRPPPESKRPKPAE-------------EAPA 190

Query: 276 LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLC 335
             VP   +L   P   + +      +  +  +   P Y +  LG S    GLL G   L 
Sbjct: 191 PLVPAWKLLLRDPVLWLLLALLLFGFAFFALLTYLPLYQEV-LGLSALLAGLLLGLAGLL 249

Query: 336 SYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNV--ALVLIT 393
             +  +L   L+D+L  R  +       +   +  ++ AL + L+     ++   + L+ 
Sbjct: 250 GAIGRLLLGRLSDRLGRRRRL-------LLALLLLILAALGLALLSLTESSLWLLVALLL 302

Query: 394 WFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSP 439
                 L+  +    ++++        G       T       L P
Sbjct: 303 LGFGAGLVFPALNALVSDLA--PKEERGTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score =  113 bits (284), Expect = 1e-27
 Identities = 84/371 (22%), Positives = 129/371 (34%), Gaps = 59/371 (15%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL 156
           +     +  G I+S+F   Y L  ++ G L+ RFG + V     L+ A+ SLL+  A   
Sbjct: 28  DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL--AFAS 85

Query: 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQ-GFSFGIGLTYPLCGF 215
               L+  R + G+  G  +PA  AL+  W P  ER R +  F  GF  G  L   L G 
Sbjct: 86  SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGL 145

Query: 216 LIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKG 275
           L    GWR +F     LG +  +   FL                                
Sbjct: 146 LAESLGWRWLFLILAILGLLLALLLLFLL------------------------------- 174

Query: 276 LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLC 335
                           + +  F   + +Y  +   P Y++ +LG S    GLL     L 
Sbjct: 175 -----------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLG 223

Query: 336 SYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWF 395
             L ++L   L+D             R++   I  ++ AL ++L+        L++    
Sbjct: 224 GILGALLGGLLSD---------RLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLL 274

Query: 396 VAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES 455
           +   L  A  A          P   G       T       L P++AG  L         
Sbjct: 275 LGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL-----DTGG 329

Query: 456 WRQVFLIAGAV 466
           +  VFLI  A+
Sbjct: 330 YGGVFLILAAL 340

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|233167 TIGR00881, 2A0104, phosphoglycerate transporter family protein

 Score =  111 bits (280), Expect = 8e-27
 Identities = 76/351 (21%), Positives = 126/351 (35%), Gaps = 27/351 (7%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL 156
           E     T  G +LSSF   Y +S+ V G ++ R   +       ++ AI +L        
Sbjct: 24  EIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF--FGFST 81

Query: 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQ-GFSFGIGLTYPLCGF 215
               + AL ++ GI  G+ WP     V  W   +ER  ++S +    + G GL  PL  F
Sbjct: 82  SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLF 141

Query: 216 LIA-HYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSK 274
            IA  Y W  VF   G +  I  +  + L  D+P     +   E    +E         +
Sbjct: 142 GIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQS-CGLPPAEEMPNEEPDGDAEKKEE 200

Query: 275 GLKVPWVS----ILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330
            L          +L +   W I +       V    +   P Y+    GFS +       
Sbjct: 201 ELT-KKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFT 259

Query: 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRK-----------VFTAISQVIPALLVML 379
              L   + ++L  +L+D+LF      L                +  A + ++  + +  
Sbjct: 260 LYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFA 319

Query: 380 IGYLGCNVALVLITWFVAVTLITASYAGAMANVVD----IGPNFAGPILAF 426
           +G+L       ++   +A  L     AG  A  V     +G   AG  L +
Sbjct: 320 LGFLV--YGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGY 368

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 379

>gnl|CDD|225180 COG2271, UhpC, Sugar phosphate permease [Carbohydrate transport and metabolism]

 Score = 90.4 bits (225), Expect = 2e-19
 Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 14/272 (5%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL 156
           +     T  G + S+F   Y +S+ V GVL+ R   +    F  +++AI ++L   +  L
Sbjct: 58  DGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSL 117

Query: 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQG-FSFGIGLTYPLC-- 213
                  L  + G   G+ WP     + HW    ER  + S +    + G  L   +   
Sbjct: 118 --FLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL 175

Query: 214 GFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP--LKHPRITRKELDYIQENIEPTIV 271
            F   H GWR+ FY  G +  I  +   FL  D P     P I     D +   I     
Sbjct: 176 AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPL--EIYEEEK 233

Query: 272 GSKGL---KVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLL 328
            ++GL   ++    +L +   W + +       V Y     GP Y+  + GFS+      
Sbjct: 234 ENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWA 293

Query: 329 TGAPFLCSYLSSVLFCYLADQLFV--RNIMSL 358
                +     ++L  +L+D+LF   R  M+L
Sbjct: 294 ISLFEVAGLPGTLLAGWLSDKLFKGRRGPMAL 325

Length = 448

>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport

 Score = 60.1 bits (146), Expect = 9e-10
 Identities = 81/368 (22%), Positives = 141/368 (38%), Gaps = 33/368 (8%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL 156
           E+  D    G + S+         +  G L  R G + V  +S L+ ++ +LL   A   
Sbjct: 46  EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLC--ALAT 103

Query: 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGF 215
           +   L+ LR + G+  G   P + ALV  + P   R   +   F G+  G  +   L G+
Sbjct: 104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGW 163

Query: 216 LIAHYGWRSVFYTTGSLGAI--WCVAWW------FLAFDAPLKHPRITRKELDYIQENIE 267
           LI  +GWRS+FY  G    +    +  +      FL    P    RI       +Q   +
Sbjct: 164 LIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQ 223

Query: 268 PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPG--------PRYMKTILG 319
             +   K  +    S+  +         T   +W+ Y  ++ G        P+ M   LG
Sbjct: 224 SALPEQKATQGTKRSVFKALFQGKTARITVL-LWLLYFMLLVGVYFLTNWLPKLMVE-LG 281

Query: 320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVML 379
           FS+               + S++F +LAD+L  R    L            ++ A+  +L
Sbjct: 282 FSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-----------LLGAVFAVL 330

Query: 380 IGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFA-GPILAFAQTIHMTASFLS 438
           +G    +  L+L+   +A   +    +G  A +    P       + +A  I    + + 
Sbjct: 331 VGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIG 390

Query: 439 PMVAGYFL 446
           P++AGY L
Sbjct: 391 PILAGYLL 398

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 59.5 bits (145), Expect = 2e-09
 Identities = 62/327 (18%), Positives = 119/327 (36%), Gaps = 37/327 (11%)

Query: 98  FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLH 157
                   G +++++     L   +  +LT R   + +      +  + +LL   A    
Sbjct: 43  LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--S 100

Query: 158 YGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFL 216
           +  L+  R++ G+A G+ W    AL    +P  +R R ++  F G +    L  PL  FL
Sbjct: 101 FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL 160

Query: 217 IAHYGWRSVFYTTGSLGAI-WCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKG 275
              +GWR+ F     L  +   + W  L             + L                
Sbjct: 161 GQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTL---------------- 204

Query: 276 LKVPWVSILTSPPAWAIGITTF---GRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332
                + +L  P      + TF      +  Y +I P   +++++ GFS+    L+  A 
Sbjct: 205 -----LRLLRRPGVLLGLLATFLFMTGHFALYTYIRP---FLESVAGFSVSAVSLVLLAF 256

Query: 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKV------FTAISQVIPALLVMLIGYLGCN 386
            +  ++ ++L   LAD+   R +++   +  +      FT  S  +   L+ L G+    
Sbjct: 257 GIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSP 316

Query: 387 VALVLITWFVAVTLITASYAGAMANVV 413
               L T    +    A  AG++    
Sbjct: 317 ALQGLQTRLARLAPDAADLAGSLNVAA 343

Length = 394

>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein

 Score = 55.0 bits (133), Expect = 6e-08
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 6/135 (4%)

Query: 110 SSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQG 169
           S F+   +L   V G L+ RFG K V   S LVTA+  +L   A   +Y   +  R + G
Sbjct: 134 SCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVL--TAFSPNYTVFLVFRLLVG 191

Query: 170 IASGLTWPAMYALVGHWIPSNERSRF-MSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYT 228
           +  G  W     L   ++P  +R+         FS G+ +  PL  + I    WR +   
Sbjct: 192 MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGL-VLLPLVAYFIPD--WRWLQLA 248

Query: 229 TGSLGAIWCVAWWFL 243
                 ++ +  WF+
Sbjct: 249 VSLPTFLFFLLSWFV 263

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 505

>gnl|CDD|129794 TIGR00711, efflux_EmrB, drug resistance transporter, EmrB/QacA subfamily

 Score = 52.8 bits (127), Expect = 3e-07
 Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 4/133 (3%)

Query: 124 GVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV 183
           G L +RFGT+ +F  S     + SLL   A  L    +I  R IQG   G   P  ++ +
Sbjct: 58  GWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLE--LMIIFRVIQGFGGGPLIPLSFSTL 115

Query: 184 GHWIPSNERSRFMSSFQ-GFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCV-AWW 241
            +  P  +R R M+ +         L   L G++I +Y WR +F     +G I  V A++
Sbjct: 116 LNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFF 175

Query: 242 FLAFDAPLKHPRI 254
            L  D P      
Sbjct: 176 ILPRDKPAASENF 188

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]. Length = 485

>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 13/136 (9%)

Query: 116 YILSQVVG----GVLTQRFGTKTVFGFSQLVTAICSLL-IPQAAVLHYGALIALRSIQGI 170
           Y L Q++     G+LT RFG K V         I  L     A   +   LI  R +QG 
Sbjct: 7   YALGQLIYSPLSGLLTDRFGRKPVLLVG---LFIFVLSTAMFALSSNITVLIIARFLQGF 63

Query: 171 ASGLTWPAMYALVGHWIPSNERSR---FMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFY 227
            +     A  AL+    P  ER      MS+       +G   PL G L    GWR+ F 
Sbjct: 64  GAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGP--PLGGVLAQFLGWRAPFL 121

Query: 228 TTGSLGAIWCVAWWFL 243
               L     +   FL
Sbjct: 122 FLAILALAAFILLAFL 137

Length = 141

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 50.4 bits (121), Expect = 1e-06
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 4/149 (2%)

Query: 98  FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKT-VFGFSQLVTAICSLLIPQAAVL 156
                   G +LS F    IL  ++GG+L+ R G +  +     L+ A+  LL+  A   
Sbjct: 206 LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL--ALAP 263

Query: 157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGF-SFGIGLTYPLCGF 215
               L+    + G   G  +PA+  L     P   R      F  F S G  L   L G 
Sbjct: 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGL 323

Query: 216 LIAHYGWRSVFYTTGSLGAIWCVAWWFLA 244
           L+   G+  VF    +L  +  +    L 
Sbjct: 324 LLDTGGYGGVFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter

 Score = 45.4 bits (108), Expect = 6e-05
 Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGA 160
            T   G I+S F    ++  +  G L  RFG K       ++  I +LL   A    +  
Sbjct: 44  STVLSGLIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKSFYM 103

Query: 161 LIALRSIQGIASGLTWPAMYALVGHWI----PSNERSRFMSSFQ-GFSFGIGLTYPLCGF 215
           LI  R I G+  G        LV  +I    P   R    S +Q G +FGI +   + G 
Sbjct: 104 LIVGRVIVGLGVGGI----SVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAA-IIGL 158

Query: 216 LIAHY----GWRSVFYTTGSLGAIWCVAWWFL 243
            +  Y    GWR           +  +   FL
Sbjct: 159 GLNKYSNSDGWRIPLGLQFVPAILLLIGLLFL 190

Length = 449

>gnl|CDD|223553 COG0477, ProP, Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 56/302 (18%), Positives = 105/302 (34%), Gaps = 14/302 (4%)

Query: 98  FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLH 157
                   G +LS+F+  Y +  ++ G L  R+G + V     L+  + +LL+  A  + 
Sbjct: 34  LSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93

Query: 158 YGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQ---GFSFGIGLTYPLCG 214
              L+ LR +QG+  G   P   AL+  W P                 + G+ L   L G
Sbjct: 94  LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153

Query: 215 FLIAH--YGWRSVFYTTGSLGAIWCVAWW---------FLAFDAPLKHPRITRKELDYIQ 263
            L+    +GWR+ F     LG +  +             L     L    + +  L  + 
Sbjct: 154 LLLGALLWGWRAAFLLAALLGLLLLILVLLLDLLLAAPRLPLAVGLALIELGKLLLLLLI 213

Query: 264 ENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQ 323
             +   ++   GL +             +G+          I ++  P  +    G S  
Sbjct: 214 LLLGGLVLLLLGLYLSAAGFGLRALLLGLGLALLALFVGALILLVLLPILLGAAGGLSAL 273

Query: 324 TNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL 383
                     +   L+ +L   +   L V  +     +R +  A + ++  LL++L+  L
Sbjct: 274 VGAAGGLLALILLGLAGLLGTLVGGSLLVDRLGRSLGLRAILLAGALLLAILLLVLLLAL 333

Query: 384 GC 385
             
Sbjct: 334 VL 335

Length = 338

>gnl|CDD|183487 PRK12382, PRK12382, putative transporter; Provisional

 Score = 44.3 bits (105), Expect = 1e-04
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 11/130 (8%)

Query: 106 GAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIAL- 164
           G  L++F   ++L +V+ G +  RFG   V   S LV  +  LL+  A      A +AL 
Sbjct: 252 GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP----TAWVALA 307

Query: 165 -RSIQGIASGLTWPAMYALVGHWIPSNERSRFM---SSFQGFSFGIGLTYPLCGFLIAHY 220
             ++ G    L +PA+   V   +PS  R   +   ++FQ  ++G+  + PL G L   +
Sbjct: 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV--SGPLAGMLATSF 365

Query: 221 GWRSVFYTTG 230
           G+ SVF    
Sbjct: 366 GYPSVFLAGA 375

Length = 392

>gnl|CDD|225365 COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism]

 Score = 44.2 bits (105), Expect = 1e-04
 Identities = 68/375 (18%), Positives = 117/375 (31%), Gaps = 61/375 (16%)

Query: 115 CYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLL--IPQAAVLHYGALIALRSIQGIAS 172
            + L       L +RFG +     + L+ A   L+  +    +L  G L+A   I  + +
Sbjct: 59  AFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGAGI-AVIN 117

Query: 173 GLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIG------LTYPLCGFLIAHYGWRSVF 226
            L    + +L+    P  +R   M+     S G G      L  PL        GWR   
Sbjct: 118 VL----LPSLIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS---GGWRGAL 168

Query: 227 YTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTS 286
                L  +  + W           P+  R                     V    +  S
Sbjct: 169 GFWALLALLALLIWL----------PQALR-----------EQAASIATKLVSVRKVWRS 207

Query: 287 PPAWAIGITTFGRI-WVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCY 345
           P AW + +   G    ++YI I   P  +    G S    G L         L+ +    
Sbjct: 208 PLAWQVTL-FMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSL----MQLAQLPTAL 261

Query: 346 LADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVA-LVLITWFVAV--TLIT 402
           L   L  R      N R +      V+ ALL+ML+G +G  +A   L   +  +      
Sbjct: 262 LIPLLARR----SKNQRPL------VVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQG 311

Query: 403 ASYAGAMANVVD--IGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVF 460
            ++  A+  ++        A  +   AQ +    +   P + G+      +       + 
Sbjct: 312 GAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLA 371

Query: 461 LIAGAVGSCTYFFYQ 475
           L    +        +
Sbjct: 372 LATLLMLIFGLRAGR 386

Length = 395

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 17/177 (9%)

Query: 292 IGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLF 351
           + +  F       +     P Y+   LG S    GLL  A  L   L+  L   L+D+  
Sbjct: 1   LFLAAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFG 60

Query: 352 VRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAN 411
            R ++ +            ++   L +L+     ++ L+L+   +      A +  A A 
Sbjct: 61  RRRVLLIG-----------LLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAAL 109

Query: 412 VVDI-GPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVG 467
           + D   P   G  L          + L P++ G        SL  WR  FLI   + 
Sbjct: 110 IADWFPPEERGRALGLLSAGFGLGAALGPLLGGLLA-----SLFGWRAAFLILAILA 161

Length = 346

>gnl|CDD|225133 COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

 Score = 42.3 bits (100), Expect = 5e-04
 Identities = 60/313 (19%), Positives = 97/313 (30%), Gaps = 69/313 (22%)

Query: 117 ILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLH-YGALIALRSIQGIASGLT 175
            L ++  G LT RFG +     S L+  I  L +  A        L+ +  + G+A    
Sbjct: 63  ALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASF 122

Query: 176 WPAMYALVGHWIPSNERSRFMSSFQGFSFGI-----------GLTYPLCGFLIAHYGWRS 224
              M      + P  +        QG + GI            L  PL         WR+
Sbjct: 123 AVGM-PNASFFFPKEK--------QGLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRN 173

Query: 225 VFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSIL 284
           V        AI  V  W    D P                  E        L     ++ 
Sbjct: 174 VAGIYVVALAIAAVLAWLGMNDVP------------------EHRASVKPQLPAQLKAVF 215

Query: 285 TSPPAWAIGIT---TFGRIWVHYIFIIPG-PRYMKTILGFSIQTNGLLTGAPFLCSYLSS 340
           ++   W + +    TFG     ++      P Y+ T  G S  T GL+    FL   + +
Sbjct: 216 SNKDTWLLSLLYFATFGG----FVGFSAYLPMYLVTQFGLSPVTAGLIA---FLFPLIGA 268

Query: 341 VLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTL 400
           +                    R +   +S  I    V L  ++G  +A  L++ F+    
Sbjct: 269 L-------------------ARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG 309

Query: 401 ITASYAGAMANVV 413
              S+   +A  +
Sbjct: 310 HGGSFVVFVAVFL 322

Length = 417

>gnl|CDD|236927 PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

 Score = 41.9 bits (99), Expect = 7e-04
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 3/110 (2%)

Query: 122 VGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYA 181
           +GG L  R G K +   S  +  + SL   QA    + +L+  R + G+  G   P + A
Sbjct: 69  LGGRLADRIGRKRILIVSVALFGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIA 126

Query: 182 LVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTG 230
           L    +    R   +S  + G  FG  L   +         WR +FY  G
Sbjct: 127 LTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGG 176

Length = 406

>gnl|CDD|182486 PRK10473, PRK10473, multidrug efflux system protein MdtL; Provisional

 Score = 41.2 bits (97), Expect = 0.001
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 3/117 (2%)

Query: 123 GGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYAL 182
            G +  R G K V      +  I SLL   A       L   R +QGI +G  +   +A+
Sbjct: 58  AGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSL-FLAG-RFLQGIGAGCCYVVAFAI 115

Query: 183 VGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLI-AHYGWRSVFYTTGSLGAIWCV 238
           +   +    R++ +S   G +  I +  P+ G LI   + W+S+FYT  ++G +  +
Sbjct: 116 LRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLL 172

Length = 392

>gnl|CDD|233099 TIGR00710, efflux_Bcr_CflA, drug resistance transporter, Bcr/CflA subfamily

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 12/161 (7%)

Query: 109 LSSFYWCYILSQVVGGVLTQRFGTKTVF---GFSQLVTAICSLLIPQAAVLHYGALIALR 165
           L+ +   +   Q++ G L+ R+G + V     F   ++++   L      L     + LR
Sbjct: 46  LTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETL-----LVLR 100

Query: 166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCG-FLIAHYGWRS 224
            +Q   +        ALV    P  E SR  S             PL G +++    W +
Sbjct: 101 FVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHA 160

Query: 225 VFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQEN 265
           +F      G +     +F+    P   P   R ++    E 
Sbjct: 161 IFAFLSLAGILLSALIFFI---LPETLPYEARIQISTYFET 198

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. Length = 385

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	534
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	100.0
KOG2532|consensus	466		100.0
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	100.0
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	100.0
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	100.0
PRK11663	434	regulatory protein UhpC; Provisional	100.0
PRK03545	390	putative arabinose transporter; Provisional	100.0
TIGR00893	399	2A0114 d-galactonate transporter.	100.0
PRK10642	490	proline/glycine betaine transporter; Provisional	100.0
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	100.0
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	100.0
PLN00028	476	nitrate transmembrane transporter; Provisional	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	100.0
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	100.0
TIGR00892	455	2A0113 monocarboxylate transporter 1.	100.0
PRK10406	432	alpha-ketoglutarate transporter; Provisional	100.0
PRK14995	495	methyl viologen resistance protein SmvA; Provision	100.0
PRK03699	394	putative transporter; Provisional	100.0
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	100.0
PRK09705	393	cynX putative cyanate transporter; Provisional	100.0
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	100.0
PRK10213	394	nepI ribonucleoside transporter; Reviewed	100.0
PRK09952	438	shikimate transporter; Provisional	100.0
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	100.0
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	100.0
TIGR00891	405	2A0112 putative sialic acid transporter.	100.0
PRK10091	382	MFS transport protein AraJ; Provisional	100.0
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	100.0
PRK12307	426	putative sialic acid transporter; Provisional	100.0
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	100.0
PRK03893	496	putative sialic acid transporter; Provisional	100.0
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	100.0
PRK05122	399	major facilitator superfamily transporter; Provisi	100.0
PRK15075	434	citrate-proton symporter; Provisional	100.0
PRK10504	471	putative transporter; Provisional	100.0
PRK15403	413	multidrug efflux system protein MdtM; Provisional	100.0
PRK10077	479	xylE D-xylose transporter XylE; Provisional	100.0
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	100.0
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	100.0
KOG2533|consensus	495		100.0
PRK10489	417	enterobactin exporter EntS; Provisional	100.0
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	100.0
TIGR00897	402	2A0118 polyol permease family. This family of prot	100.0
PRK10133	438	L-fucose transporter; Provisional	100.0
TIGR00898	505	2A0119 cation transport protein.	100.0
KOG1330|consensus	493		100.0
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	100.0
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	100.0
PRK11043	401	putative transporter; Provisional	100.0
TIGR00900	365	2A0121 H+ Antiporter protein.	100.0
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	100.0
PRK12382	392	putative transporter; Provisional	100.0
TIGR00895	398	2A0115 benzoate transport.	100.0
PRK09874	408	drug efflux system protein MdtG; Provisional	100.0
PRK11652	394	emrD multidrug resistance protein D; Provisional	100.0
PRK10473	392	multidrug efflux system protein MdtL; Provisional	100.0
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	100.0
PRK03633	381	putative MFS family transporter protein; Provision	99.98
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.98
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.98
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.98
PRK15011	393	sugar efflux transporter B; Provisional	99.98
PRK10054	395	putative transporter; Provisional	99.97
PRK11010	491	ampG muropeptide transporter; Validated	99.97
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.97
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.97
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.97
PRK09528	420	lacY galactoside permease; Reviewed	99.97
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.97
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.97
KOG0569|consensus	485		99.97
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.96
KOG3764|consensus	464		99.96
KOG2504|consensus	509		99.96
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.96
PRK11902	402	ampG muropeptide transporter; Reviewed	99.96
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.96
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.96
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.96
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.96
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.95
TIGR00805	633	oat sodium-independent organic anion transporter.	99.95
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.95
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.95
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.95
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.95
TIGR00901	356	2A0125 AmpG-related permease.	99.95
KOG0252|consensus	538		99.95
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.95
KOG0254|consensus	513		99.94
KOG0253|consensus	528		99.94
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.94
KOG2615|consensus	451		99.94
KOG0255|consensus	521		99.94
PTZ00207	591	hypothetical protein; Provisional	99.94
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.93
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.93
KOG4686|consensus	459		99.92
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.89
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.89
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.89
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.88
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.88
PRK10429	473	melibiose:sodium symporter; Provisional	99.88
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.88
KOG2563|consensus	480		99.88
PRK09669	444	putative symporter YagG; Provisional	99.88
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.87
PF13347	428	MFS_2: MFS/sugar transport protein	99.85
PRK09848	448	glucuronide transporter; Provisional	99.84
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.81
PRK11462	460	putative transporter; Provisional	99.81
COG2211	467	MelB Na+/melibiose symporter and related transport	99.8
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.78
KOG3626|consensus	735		99.78
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.78
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.75
KOG2325|consensus	488		99.7
KOG2816|consensus	463		99.67
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.55
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.55
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.51
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.48
PRK11663	434	regulatory protein UhpC; Provisional	99.47
PRK10054	395	putative transporter; Provisional	99.45
PRK10642	490	proline/glycine betaine transporter; Provisional	99.43
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.42
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.42
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.41
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.41
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.38
TIGR00893	399	2A0114 d-galactonate transporter.	99.37
KOG3762|consensus	618		99.37
PRK09528	420	lacY galactoside permease; Reviewed	99.36
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.36
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.35
PRK10489	417	enterobactin exporter EntS; Provisional	99.35
PRK10504	471	putative transporter; Provisional	99.34
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.34
TIGR00900	365	2A0121 H+ Antiporter protein.	99.33
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.32
PRK03893	496	putative sialic acid transporter; Provisional	99.32
PRK03699	394	putative transporter; Provisional	99.31
PRK05122	399	major facilitator superfamily transporter; Provisi	99.31
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.31
TIGR00895	398	2A0115 benzoate transport.	99.31
TIGR00891	405	2A0112 putative sialic acid transporter.	99.31
PLN00028	476	nitrate transmembrane transporter; Provisional	99.3
PRK10091	382	MFS transport protein AraJ; Provisional	99.3
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.3
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.3
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.29
PRK03545	390	putative arabinose transporter; Provisional	99.29
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.29
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.28
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.28
PRK09874	408	drug efflux system protein MdtG; Provisional	99.28
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.28
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.27
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.27
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.27
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.27
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.27
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.26
PRK11043	401	putative transporter; Provisional	99.25
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.25
PRK12382	392	putative transporter; Provisional	99.25
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.24
PRK15011	393	sugar efflux transporter B; Provisional	99.23
PRK12307	426	putative sialic acid transporter; Provisional	99.23
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.22
PRK09705	393	cynX putative cyanate transporter; Provisional	99.22
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.21
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.21
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.21
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.2
PRK03633	381	putative MFS family transporter protein; Provision	99.2
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.2
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.2
PRK11010	491	ampG muropeptide transporter; Validated	99.19
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.19
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.18
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.18
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.17
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.17
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.15
KOG4332|consensus	454		99.15
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.14
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.13
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.13
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.07
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.06
KOG1330|consensus	493		99.06
PRK09952	438	shikimate transporter; Provisional	99.06
TIGR00805	633	oat sodium-independent organic anion transporter.	99.06
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.06
KOG3098|consensus	461		99.05
PRK10133	438	L-fucose transporter; Provisional	99.05
KOG3764|consensus	464		99.05
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.04
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.04
PRK11902	402	ampG muropeptide transporter; Reviewed	99.03
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.02
PRK15075	434	citrate-proton symporter; Provisional	99.02
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	99.02
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.02
TIGR00896	355	CynX cyanate transporter. This family of proteins	98.99
PTZ00207	591	hypothetical protein; Provisional	98.98
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	98.98
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	98.97
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	98.97
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	98.97
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.96
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	98.96
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.95
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	98.94
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.93
KOG0569|consensus	485		98.92
PRK10406	432	alpha-ketoglutarate transporter; Provisional	98.92
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	98.91
TIGR00898	505	2A0119 cation transport protein.	98.89
TIGR00901	356	2A0125 AmpG-related permease.	98.88
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	98.88
PRK09848	448	glucuronide transporter; Provisional	98.85
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	98.84
COG2270	438	Permeases of the major facilitator superfamily [Ge	98.82
KOG4686|consensus	459		98.81
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	98.78
KOG2504|consensus	509		98.76
KOG2615|consensus	451		98.74
KOG0637|consensus	498		98.69
PRK09669	444	putative symporter YagG; Provisional	98.68
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.67
KOG2532|consensus	466		98.67
PF13347	428	MFS_2: MFS/sugar transport protein	98.64
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.63
COG0477	338	ProP Permeases of the major facilitator superfamil	98.61
PRK10429	473	melibiose:sodium symporter; Provisional	98.61
COG2211	467	MelB Na+/melibiose symporter and related transport	98.58
KOG0254|consensus	513		98.54
PRK11462	460	putative transporter; Provisional	98.54
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.5
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.49
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.47
KOG3762|consensus	618		98.46
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.43
KOG3574|consensus	510		98.4
KOG0253|consensus	528		98.39
KOG0255|consensus	521		98.39
KOG3810|consensus	433		98.33
KOG2533|consensus	495		98.3
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	98.21
KOG0252|consensus	538		98.13
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	98.11
KOG2325|consensus	488		98.09
KOG1237|consensus	571		98.06
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.06
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	98.05
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	97.97
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	97.96
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	97.94
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	97.93
KOG2816|consensus	463		97.84
COG3202	509	ATP/ADP translocase [Energy production and convers	97.8
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.78
PF12832	77	MFS_1_like: MFS_1 like family	97.68
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	97.66
PF12832	77	MFS_1_like: MFS_1 like family	97.65
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	97.63
KOG3880|consensus	409		97.48
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	97.47
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	97.37
KOG2563|consensus	480		97.28
KOG1479|consensus	406		97.27
PRK03612	521	spermidine synthase; Provisional	97.21
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	97.19
PRK03612	521	spermidine synthase; Provisional	97.01
KOG3626|consensus	735		96.99
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	96.85
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	96.58
KOG0637|consensus	498		96.48
COG0477	338	ProP Permeases of the major facilitator superfamil	96.32
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	96.03
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	95.99
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	95.15
KOG1479|consensus	406		94.72
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	94.14
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	93.86
KOG3574|consensus	510		93.74
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	93.18
KOG3097|consensus	390		92.96
KOG1237|consensus	571		90.8
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	89.88
KOG4830|consensus	412		89.44
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	88.12
KOG3098|consensus	461		87.98
COG4262	508	Predicted spermidine synthase with an N-terminal m	85.63
KOG2601|consensus	503		85.51
KOG4332|consensus	454		83.07

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.9e-45  Score=345.78  Aligned_cols=407  Identities=20%  Similarity=0.285  Sum_probs=336.7

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccC
Q psy14136          9 TDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLE   88 (534)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (534)
                      ++..++|++++..++++|...|+.|.+++.++|.|                                             
T Consensus        21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l---------------------------------------------   55 (448)
T COG2271          21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPAL---------------------------------------------   55 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHH---------------------------------------------
Confidence            34567889999999999999999999999999999                                             


Q ss_pred             CCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         89 KPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQ  168 (534)
Q Consensus        89 ~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~  168 (534)
                            .+|.++|.+|+|++.+++++.|.++.++.|.++||.++|+.+.+++++.++..++.++.  ++++.+.++.++.
T Consensus        56 ------~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs--~s~~~~~~l~~ln  127 (448)
T COG2271          56 ------IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS--PSLFLFAVLWVLN  127 (448)
T ss_pred             ------HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh--hHHHHHHHHHHHH
Confidence                  44888999999999999999999999999999999999999999999999999997666  5999999999999


Q ss_pred             hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHH--HHhhhhcCCchhhhhhchhhHHHHHHhhhhcc
Q psy14136        169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLC--GFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF  245 (534)
Q Consensus       169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~--~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~  245 (534)
                      |+.+|..+|.+...++.|++++|||+..+++ .+.++|+.+.+++.  +++..+.+||..|++.++++++..++.++..+
T Consensus       128 g~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~r  207 (448)
T COG2271         128 GWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLR  207 (448)
T ss_pred             HHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999955 79999999999998  88888889999999999999999999999999


Q ss_pred             CCCCCCcccchhhhhhhhhcc-CccccC--CCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc
Q psy14136        246 DAPLKHPRITRKELDYIQENI-EPTIVG--SKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI  322 (534)
Q Consensus       246 ~~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~  322 (534)
                      |+|++....+.+|.+....+. ++++++  ....+.-++.+++||.+|.+++..++.+..-+++..|.|.|+.|..|+|.
T Consensus       208 d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~  287 (448)
T COG2271         208 DRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSL  287 (448)
T ss_pred             CCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCH
Confidence            999876544433322111111 111111  01122345668899999999999999999999999999999999999999


Q ss_pred             ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHHHHHHHHHHHHh
Q psy14136        323 QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN-VALVLITWFVAVTLI  401 (534)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  401 (534)
                      .+++...+++-+++++|.+++||++||+.+.+.       .+..++.++...+++..+...+.. .....+.++..++..
T Consensus       288 ~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR-------~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~I  360 (448)
T COG2271         288 VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR-------GPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLI  360 (448)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc-------chHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999853321       122455555555555555555422 345555555555555


Q ss_pred             hhcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        402 TASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       402 ~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      ....-..-....|..|++ .|++.|+...+.++ |.+.+....|++.|.     .||...|++..+.++++.++++...+
T Consensus       361 yGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~-----~gW~g~Fi~~~~~a~l~~lll~~~~~  435 (448)
T COG2271         361 YGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT-----WGWDGGFIVLSIAALLAILLLLPVWN  435 (448)
T ss_pred             hhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec-----CCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            444444556677999988 99999999999999 889999999999999     89999999988888887777666544


Q ss_pred             C
Q psy14136        480 S  480 (534)
Q Consensus       480 ~  480 (534)
                      .
T Consensus       436 ~  436 (448)
T COG2271         436 A  436 (448)
T ss_pred             h
Confidence            3

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=100.00  E-value=1.3e-42  Score=359.62  Aligned_cols=446  Identities=30%  Similarity=0.528  Sum_probs=342.7

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccC
Q psy14136          9 TDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLE   88 (534)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (534)
                      ....+.||.+..++++++.++|.||.+++++.++|.++.        ++....|.+...+.++                 
T Consensus        11 ~~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~--------~~~~~~~~~~~~~~~~-----------------   65 (465)
T TIGR00894        11 PYFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKE--------NSTDLACLSAENELDN-----------------   65 (465)
T ss_pred             CcccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCC--------CCCCcccccccccccc-----------------
Confidence            346678899999999999999999999999999995531        1111222221111100                 


Q ss_pred             CCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         89 KPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQ  168 (534)
Q Consensus        89 ~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~  168 (534)
                          ..+.|++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++...+++.+++.|+++
T Consensus        66 ----~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~  141 (465)
T TIGR00894        66 ----IKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQ  141 (465)
T ss_pred             ----ccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence                0145899999999999999999999999999999999999999999999999999887666545688899999999


Q ss_pred             hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      |++.+...+....++.||+|+++|++++++. .+..+|.++++++++.+.+.+ |||++|++.++++++..++++.+.+|
T Consensus       142 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~  221 (465)
T TIGR00894       142 GLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD  221 (465)
T ss_pred             HHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999954 789999999999999999884 99999999999888887777777788


Q ss_pred             CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136        247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG  326 (534)
Q Consensus       247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~  326 (534)
                      +|+.+++.+++|++..++...+++ +..+.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|.+..+.+
T Consensus       222 ~p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g  300 (465)
T TIGR00894       222 DPSIHPCISKFEKKYINSSLQGQK-GSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENG  300 (465)
T ss_pred             CcccCCCCCHHHHHHHHhhccccc-CCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhH
Confidence            776655444444444333222111 1122345689999999999999999999999999999999999998999999999


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccc
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYA  406 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (534)
                      ++.++..++.+++.++.|+++||+++|+.......++....++..+..+..+.......+....+..+.+.+++.+...+
T Consensus       301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  380 (465)
T TIGR00894       301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLA  380 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhh
Confidence            99999999999999999999999988766543333333333333333333322333222333344444444444444455


Q ss_pred             ccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccccCC
Q psy14136        407 GAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWN  486 (534)
Q Consensus       407 ~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (534)
                      .......+..|+.+|.+.|+.+..+.+++.++|.+.|.+.+.  .+..+|..+|++.+++.+++.++.....+.++++++
T Consensus       381 ~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~--~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~  458 (465)
T TIGR00894       381 GVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQ--DSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWA  458 (465)
T ss_pred             hhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCC--CCchHHHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence            555566688888899999999999999999999999999876  211468999999998888888777666655555554

>KOG2532|consensus

Probab=100.00  E-value=5.4e-43  Score=352.92  Aligned_cols=389  Identities=37%  Similarity=0.727  Sum_probs=354.5

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      +.++++|+.+.|++.+.+++|+.+++++.|+++||+|.|+++..+.++.++++++++++...+++.+++.|+++|++.|.
T Consensus        65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~  144 (466)
T KOG2532|consen   65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV  144 (466)
T ss_pred             CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence            34899999999999999999999999999999999999999999999999999999999878888999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      .+|+...+.++|.|++||++..+ ++++..+|.+++.+++|++.+. +||+.+|++.++++++..++++++..|+|++++
T Consensus       145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~  224 (466)
T KOG2532|consen  145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP  224 (466)
T ss_pred             HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            99999999999999999999999 6678889999999999999999 999999999999999999999999999999999


Q ss_pred             ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136        253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP  332 (534)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~  332 (534)
                      ..+++|++.+++...+++.+++ .+.+|+++++++.+|..++..++.+++.+.+..|+|.|+++++|++..+.|++.++.
T Consensus       225 ~is~~El~~I~~~k~~~~~~~~-~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP  303 (466)
T KOG2532|consen  225 NISEKELKYIEKGKSEAHVKKK-PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP  303 (466)
T ss_pred             CCCHHHHHHHHhcccccccCCC-CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence            9999999998887666554433 678999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchh-HHHHHHHHHHHHhhhcccccchh
Q psy14136        333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVA-LVLITWFVAVTLITASYAGAMAN  411 (534)
Q Consensus       333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  411 (534)
                      .+...+..+++|.++||+.+| .+.....||.+..++....+++++.+.+.+.... ..++.+.+.....|...+..+..
T Consensus       304 ~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~  382 (466)
T KOG2532|consen  304 FLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKN  382 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhh
Confidence            999999999999999999998 8888899999999999999999999998875333 55555566566677777777777


Q ss_pred             hhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccccCCC
Q psy14136        412 VVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQ  487 (534)
Q Consensus       412 ~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  487 (534)
                      ..+..|++.+..+|+.+.+..+.++++|.+.|.+... + ....|+.+|++.+++.+++.+.+.++.+.+++++.+
T Consensus       383 ~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~-~-t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~  456 (466)
T KOG2532|consen  383 HQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD-N-TREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTK  456 (466)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC-C-CHHHHHHHHHHHHHHHHHhchheeEeecCcccCccC
Confidence            7777999999999999999999999999999999953 2 347999999999999999998888887777777765

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=100.00  E-value=1.9e-40  Score=343.07  Aligned_cols=401  Identities=17%  Similarity=0.195  Sum_probs=299.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCC
Q psy14136         15 RVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNE   94 (534)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~   94 (534)
                      ++.++.+++++|+..|+||..++.+.|.+                                                   
T Consensus        27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i---------------------------------------------------   55 (467)
T PRK09556         27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDM---------------------------------------------------   55 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHhcChhhhhHHH---------------------------------------------------
Confidence            55667778999999999999999999988                                                   


Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA---AVLHYGALIALRSIQGIA  171 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---~~~~~~~l~~~r~l~G~g  171 (534)
                      ++|+|++..+.|++.+++.+++++++++.|+++||+|||+++..++++++++.++.++.   .+++++.+++.|+++|++
T Consensus        56 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~  135 (467)
T PRK09556         56 ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFF  135 (467)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence            55999999999999999999999999999999999999999999999988887775542   236899999999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc---CCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY---GWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~---gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      .+...|...+++++|+|+++|+++++++ .+.++|.++++++..++.+.+   +||..|.+.++++++..++.+++.++.
T Consensus       136 ~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~  215 (467)
T PRK09556        136 QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS  215 (467)
T ss_pred             HhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999955 788999999998887776653   699999988888887777777777777


Q ss_pred             CCCCcccchhhhhhhhhccC-ccccC-CCC-C-ccc-HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc
Q psy14136        248 PLKHPRITRKELDYIQENIE-PTIVG-SKG-L-KVP-WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI  322 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~-~~~~~-~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~  322 (534)
                      |++.+..++++.  ..+... +++.. .++ . ... .+..+++|.+|...+..++......++..|.|.|+++.+|++.
T Consensus       216 p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~  293 (467)
T PRK09556        216 PEELGWGKAEEI--FGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSK  293 (467)
T ss_pred             hhhcCCCChhhc--ccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCH
Confidence            765433322221  000000 00000 000 0 011 2337899999999999999888888899999999998899999


Q ss_pred             ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhh
Q psy14136        323 QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLIT  402 (534)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (534)
                      .+++...+...++.+++.++.|+++||+++|+.+.        ...........+..+.... +.....+..+..+++..
T Consensus       294 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~  364 (467)
T PRK09556        294 EDAINTFTLFEIGALVGSLLWGWLSDLANGRRALV--------ACIALALIIFTLGVYQHAT-SEYMYLASLFALGFLVF  364 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH--------HHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999886531        1111111111112222222 33333333333332222


Q ss_pred             hcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccc-cc------cChhhHHHHHHHHHHHHHHHHHH
Q psy14136        403 ASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQD-DE------TSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       403 ~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~-~~------~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      ...........|..|++ +|++.|+.+...++ |++++|.+.|++.|. ..      ....+|+..|++.+++.+++.+.
T Consensus       365 ~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~  444 (467)
T PRK09556        365 GPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICL  444 (467)
T ss_pred             hHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHH
Confidence            22222234556888876 99999999999997 779999999999991 00      00157999999998888887777


Q ss_pred             HHhh
Q psy14136        474 YQVL  477 (534)
Q Consensus       474 ~~~~  477 (534)
                      .+.+
T Consensus       445 ~~~~  448 (467)
T PRK09556        445 MAIV  448 (467)
T ss_pred             HHHH
Confidence            6655

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.9e-39  Score=313.36  Aligned_cols=350  Identities=18%  Similarity=0.276  Sum_probs=300.2

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++|+|+|..+.|++.|.|.+++++++|+...+.||+.||++++..+.++.++.++++++  +||+.++++|++.|+..|.
T Consensus        40 A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alA--p~f~~Ll~aR~~~g~a~G~  117 (394)
T COG2814          40 AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALA--PSFAVLLLARALAGLAHGV  117 (394)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence            67999999999999999999999999999999999999999999999999999998777  7999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      +++...++..+..|+++|+++++ +..+..++.++|.+++.++.+.+|||.+|++.+.++++..+..+..+|  |++.+.
T Consensus       118 f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~  195 (394)
T COG2814         118 FWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISG  195 (394)
T ss_pred             HHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCC
Confidence            99999999999999999999999 778999999999999999999999999999999999999998888888  222111


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                      ..                  +....+..+++|+|+++...+..++...+.+...+|+.+++++..|++....+++...++
T Consensus       196 ~~------------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~G  257 (394)
T COG2814         196 SL------------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFG  257 (394)
T ss_pred             CC------------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHH
Confidence            10                  111223467899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                      +++++|..+.|++.|| +.++.+          .....+..+.++.+.+...+.+......++.++..............
T Consensus       258 v~~~~Gn~~gGrl~dr-~~~~~l----------~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a  326 (394)
T COG2814         258 IAGFIGNLLGGRLADR-GPRRAL----------IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLA  326 (394)
T ss_pred             HHHHHHHHHHhhhccc-cchhHH----------HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhc
Confidence            9999999999999999 665542          44445555556666666545555555555555555554555555566


Q ss_pred             ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      +..|+++..+.++.....++|..+|..++|.+.|.     .++....++.+++.+++.++.+...+.++
T Consensus       327 ~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~-----~g~~~~~~~~a~l~~~a~~~~~~~~~~~~  390 (394)
T COG2814         327 RLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA-----LGYAATGWVGAALLLLALLLALLSARKDR  390 (394)
T ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            66778899999999999999999999999999999     89999999999999888888776655443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=100.00  E-value=3e-39  Score=328.30  Aligned_cols=386  Identities=20%  Similarity=0.245  Sum_probs=290.3

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136         14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN   93 (534)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~   93 (534)
                      .||.+..+++++|+++++||.+++.+.|.+                                                  
T Consensus         5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l--------------------------------------------------   34 (412)
T TIGR02332         5 LFRRLIIFLFILFIFSFLDRINIGFAGLTM--------------------------------------------------   34 (412)
T ss_pred             ehhHHHHHHHHHHHHHHhhhhhHHHHHHhh--------------------------------------------------
Confidence            467777788999999999999999999887                                                  


Q ss_pred             CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                       ++|+|++..+.|++.+++.+++++++++.|+++||+|||+++..+++++++++++++++  ++++.+++.|+++|++.+
T Consensus        35 -~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~  111 (412)
T TIGR02332        35 -GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA--TGPESLYLLRILVGIAEA  111 (412)
T ss_pred             -HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHh
Confidence             56999999999999999999999999999999999999999999999999999997665  689999999999999999


Q ss_pred             chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh------hcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA------HYGWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~------~~gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      ...|...+++.|++|+++|+++++++ .+.++|.++++++++++.+      ..|||+.|++.++++++..++.++++||
T Consensus       112 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~  191 (412)
T TIGR02332       112 GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD  191 (412)
T ss_pred             hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence            99999999999999999999999955 7889999999999988864      3699999999988888877777778899


Q ss_pred             CCCCCcccchhhhhhhhhccC-------ccccC-CCC---CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136        247 APLKHPRITRKELDYIQENIE-------PTIVG-SKG---LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMK  315 (534)
Q Consensus       247 ~p~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  315 (534)
                      +|++.+...+++++...+..+       ..+.. .+.   ....+++++ +|.+|...+..++.....+.+.+|+|.|++
T Consensus       192 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~  270 (412)
T TIGR02332       192 SPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQ  270 (412)
T ss_pred             CcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            887644322222221111100       00000 000   012244444 588888888888888889999999999998


Q ss_pred             hh-hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q psy14136        316 TI-LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITW  394 (534)
Q Consensus       316 ~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (534)
                      +. .|.+..+++.+.....++.+++.++.|+++||+++|+..         ......+..+.+.+..... +........
T Consensus       271 ~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  340 (412)
T TIGR02332       271 SFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH---------TALPYLFAAAGWLLASATD-HNLIQLLGI  340 (412)
T ss_pred             hcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH---------HHHHHHHHHHHHHHHHhcC-CHHHHHHHH
Confidence            72 367778889899999999999999999999999876531         1122222222222222222 222222222


Q ss_pred             HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHH
Q psy14136        395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVG  467 (534)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~  467 (534)
                      +...++.....+.......+..|++ |++++|+.+...++|++++|.+.|.+.|.  .  ++|+..+++.+++.
T Consensus       341 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~--~--g~~~~~~~~~~~~~  410 (412)
T TIGR02332       341 IMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDA--T--GSFNSGLWFVAALL  410 (412)
T ss_pred             HHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccccc--C--CCCchhHHHHHHHH
Confidence            2222222222222334445666654 99999999999999999999999999997  1  35888888766644

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK11663 regulatory protein UhpC; Provisional

Probab=100.00  E-value=2.6e-38  Score=323.99  Aligned_cols=401  Identities=17%  Similarity=0.232  Sum_probs=295.8

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      .+|+.++...+++++..++++..++..+|.+                                                 
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------   49 (434)
T PRK11663         19 YWRRHILITMYLGYALFYFTRKSFNAAMPEM-------------------------------------------------   49 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHH-------------------------------------------------
Confidence            3566777778899999999999999999888                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~  172 (534)
                        .+++|+|+.+.|++.+.+.+++++++++.|+++||+|||+++.++.++.+++.++++++  ++++.+++.|++.|++.
T Consensus        50 --~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~  125 (434)
T PRK11663         50 --LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS--SSLWAFALLWVLNAFFQ  125 (434)
T ss_pred             --HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence              45899999999999999999999999999999999999999999999999999886655  68999999999999999


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH  251 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~  251 (534)
                      |...+...+++.+++|+++|++++++ ..+.++|..+++++++++.+.+|||+.|++.+++.++..+..++.+||+|++.
T Consensus       126 g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~  205 (434)
T PRK11663        126 GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAM  205 (434)
T ss_pred             HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhc
Confidence            99999999999999999999999995 57889999999999999999999999999988877766655566667766432


Q ss_pred             cccchhhhhhhhhccCccccCCCCCccc-H-HHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136        252 PRITRKELDYIQENIEPTIVGSKGLKVP-W-VSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT  329 (534)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~  329 (534)
                      ...+.++.+...++..++..+.+..... + ...+++|.+|.+.+..++.......+..|+|.|+.+.+|++..+++...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~  285 (434)
T PRK11663        206 GLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAV  285 (434)
T ss_pred             CCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence            1111000000000000000000001111 1 2367789999888888888888888889999999877899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhh--cccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136        330 GAPFLCSYLSSVLFCYLADQLFVR--NIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG  407 (534)
Q Consensus       330 ~~~~~~~~~~~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (534)
                      +...+++++++++.|++.||+.++  +..      .....++..+....+..+. .. +........+..+++.......
T Consensus       286 ~~~~~~~~~g~~~~g~l~dr~~~~~r~~~------~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g~~~~~~~~~  357 (434)
T PRK11663        286 SMFELGGFIGALVAGWGSDKLFNGNRGPM------NLIFAAGILLSVGSLWLMP-FA-SYVMQAACFFTIGFFVFGPQML  357 (434)
T ss_pred             HHHHHHHHHHHHHHhhhHHHhccCCccHH------HHHHHHHHHHHHHHHHHcc-cc-cHHHHHHHHHHHHHHHhhHHHH
Confidence            999999999999999999999433  221      0111122222222222111 11 2222222222222211111112


Q ss_pred             cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      ......|..|++ +|++.|+.++..++|++++|.+.|++.|.     .+|+..|++.+++.+++++..+...+
T Consensus       358 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~-----~g~~~~f~~~~~~~~~~~~~~~~~~~  425 (434)
T PRK11663        358 IGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI-----WHWTGFFVVISIAAGISALLLLPFLN  425 (434)
T ss_pred             HHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh-----cccHHHHHHHHHHHHHHHHHHHHHHh
Confidence            234556777654 99999999999999999999999999998     78999999998888877766554443

>PRK03545 putative arabinose transporter; Provisional

Probab=100.00  E-value=9.6e-38  Score=315.85  Aligned_cols=346  Identities=14%  Similarity=0.128  Sum_probs=278.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.++++++++++  ++++.++++|+++|++.+.
T Consensus        36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~~~G~~~~~  113 (390)
T PRK03545         36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA--WNFTVLLISRIGIAFAHAI  113 (390)
T ss_pred             HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence            56999999999999999999999999999999999999999999999999999987665  6999999999999999998


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|++++++ ..+.++|..+++++++.+.+++|||+.|++.++++++..+..+...|+.|++++ 
T Consensus       114 ~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~-  192 (390)
T PRK03545        114 FWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHS-  192 (390)
T ss_pred             HHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc-
Confidence            999999999999999999999995 478899999999999999999999999999998887776666655555432110 


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                         +                  ...+.++++|+|.++...+..++..........+.+.++++..|.+..+++.+.....
T Consensus       193 ---~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  251 (390)
T PRK03545        193 ---G------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFG  251 (390)
T ss_pred             ---c------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence               0                  0113467888898887766666666666666778888888878999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                      ++.++++++.+++.||+++|..           ..+..+.......+.....+.+......++.+.+.....+.....+.
T Consensus       252 ~~~~~g~~~~g~l~dr~~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~  320 (390)
T PRK03545        252 GAGIIGSVLFSRLGNRHPSGFL-----------LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVL  320 (390)
T ss_pred             HHHHHHHHHHHHHhhccchhHH-----------HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            9999999999999999987643           22333333333222222224444444555555555544455566677


Q ss_pred             ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      +..|+++++++|+.+...++|..+||.+.|.+.|.     .+++..|++.+.+.+++++......++
T Consensus       321 ~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~  382 (390)
T PRK03545        321 KLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLH-----LGLSSIGYVGAALALAALVWSILIFRR  382 (390)
T ss_pred             HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhHHHHHHHHHHHHHHHHHHHHccc
Confidence            77888899999999999999999999999999999     899999999998888888777666543

>TIGR00893 2A0114 d-galactonate transporter

Probab=100.00  E-value=1.2e-36  Score=308.13  Aligned_cols=371  Identities=22%  Similarity=0.339  Sum_probs=285.5

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+++.+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++  ++++.++++|++.|++.+.
T Consensus        21 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~   98 (399)
T TIGR00893        21 QEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA--GAYVSLYILRVLLGAAEAP   98 (399)
T ss_pred             HHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHh
Confidence            55899999999999999999999999999999999999999999999999999886555  5899999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|+++++ .....++|.++++.+++.+.+..+||+.|++.+++.++..++.++..||+|++++.
T Consensus        99 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (399)
T TIGR00893        99 FFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKW  178 (399)
T ss_pred             hhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCcccc
Confidence            99999999999999999999999 45788999999999999999999999999999888888777777677776654433


Q ss_pred             cchhhhhhhhhccC---ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136        254 ITRKELDYIQENIE---PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG  330 (534)
Q Consensus       254 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~  330 (534)
                      .++++++...+...   +.+.+.+..+...++.+++|+++...+..++.......+..+.|.|+++.+|.+..+.+.+..
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (399)
T TIGR00893       179 LTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMAS  258 (399)
T ss_pred             CCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHH
Confidence            22222221111100   011112233445778899999999999999999999999999999999889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccch
Q psy14136        331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMA  410 (534)
Q Consensus       331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (534)
                      ...++.+++.++.|++.||+++|+.....  .......+..+..+........+ ..+.......+.+++.+ ..+....
T Consensus       259 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~  334 (399)
T TIGR00893       259 LPGIVGFIGMILGGRLSDLLLRRGKSLVF--ARKTAIIAGLVLSLLMFATNYVN-IPYAALALVALGFFGLG-AGAIGWA  334 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccchhH--HHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHhchh-hhhHHHH
Confidence            99999999999999999999998622100  00001111111111111111111 22333333333333333 5677778


Q ss_pred             hhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHHHHHHHHHHHHHHh
Q psy14136        411 NVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       411 ~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      +..|..|++ |+++.|+.+.+..+|..++|.+.|.+.|.     .+ |...|++.+++.+++.+..+.
T Consensus       335 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~  397 (399)
T TIGR00893       335 LISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT-----TGSFAGALMVVAALALIGALSYLL  397 (399)
T ss_pred             HHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC-----CCchhHHHHHHHHHHHHHHHHHHH
Confidence            888988866 99999999999999999999999999998     56 888998888877776665543

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=100.00  E-value=1.3e-36  Score=315.97  Aligned_cols=394  Identities=16%  Similarity=0.161  Sum_probs=268.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCC
Q psy14136         16 VVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEE   95 (534)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~   95 (534)
                      +......+++.++.++|...++...|.+.+                                                  
T Consensus        15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~--------------------------------------------------   44 (490)
T PRK10642         15 RKAITAASLGNAMEWFDFGVYGFVAYALGK--------------------------------------------------   44 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence            345566788999999999999999988733                                                  


Q ss_pred             ccccCChh----hHHH--HHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH--------HH
Q psy14136         96 GEFDWDTT----TQGA--ILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG--------AL  161 (534)
Q Consensus        96 ~~~~~s~~----~~g~--~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~--------~l  161 (534)
                       +++.+.+    .++.  +.++.++++.+++++.|+++||+|||+++.++++++++++++++++  +++.        .+
T Consensus        45 -~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~--~~~~~~g~~a~~~l  121 (490)
T PRK10642         45 -VFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLI--PSYATIGIWAPILL  121 (490)
T ss_pred             -hhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHH
Confidence             4432221    1222  2578889999999999999999999999999999999999998776  5665        38


Q ss_pred             HHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhchh
Q psy14136        162 IALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGSL  232 (534)
Q Consensus       162 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~~  232 (534)
                      +++|+++|++.|..++...+++.|++|+++|+++.++ ..+..+|..+++.+...+.        ..+|||++|++.+++
T Consensus       122 ~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~  201 (490)
T PRK10642        122 LLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPL  201 (490)
T ss_pred             HHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHH
Confidence            9999999999999999999999999999999999884 4667777777776554433        257999999997665


Q ss_pred             hHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcC-HHHHH-HHHHHHHHHHHHHHHHhch
Q psy14136        233 GAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTS-PPAWA-IGITTFGRIWVHYIFIIPG  310 (534)
Q Consensus       233 ~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  310 (534)
                      +++ .++....+||+|+.....++.+.+  .+   +.  ..+..+.++++++++ ++.+. .....++....++.+..|+
T Consensus       202 ~l~-~~~~~~~~~esp~~~~~~~~~~~~--~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (490)
T PRK10642        202 GII-GLYLRHALEETPAFQQHVDKLEQG--DR---EG--LQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYM  273 (490)
T ss_pred             HHH-HHHHHHcCCCChhHHHHHHhhhhh--cc---cc--ccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            554 333445567766532111000000  00   00  001123356666653 33332 3333345567778888999


Q ss_pred             hhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH-HHHHHHHHhh-cCCchh
Q psy14136        311 PRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI-PALLVMLIGY-LGCNVA  388 (534)
Q Consensus       311 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~  388 (534)
                      |.|+++.+|++..+.++......++.+++.++.|+++||+|||+.+          ..+.++ ....+..+.. ...+..
T Consensus       274 p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  343 (490)
T PRK10642        274 PSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV----------ILGSVALFVLAIPAFILINSNVIG  343 (490)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHHhCCCHH
Confidence            9999887899888777777777888999999999999999998753          222221 1111111111 121333


Q ss_pred             HHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHH
Q psy14136        389 LVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVG  467 (534)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~  467 (534)
                      ......++.+++.+...+.......+.+|++ |+++.|+.+....+++.++|.+.+++.+.  .  .+|...++...+..
T Consensus       344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~--~--~~~~~~~~~~~~~~  419 (490)
T PRK10642        344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES--T--QNLMMPAYYLMVVA  419 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--CCchHHHHHHHHHH
Confidence            3334444444444444455566667888877 99999987776778888999999998876  1  23555555555566


Q ss_pred             HHHHHHHHhhcCCcccc
Q psy14136        468 SCTYFFYQVLGTSEVQP  484 (534)
Q Consensus       468 ~~~~~~~~~~~~~~~~~  484 (534)
                      +++++..+++++++++.
T Consensus       420 ~i~~~~~~~~pes~~~~  436 (490)
T PRK10642        420 VIGLITGVTMKETANRP  436 (490)
T ss_pred             HHHHHHHHHhccccCCC
Confidence            66666666667665543

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=100.00  E-value=1.5e-36  Score=309.05  Aligned_cols=384  Identities=19%  Similarity=0.165  Sum_probs=296.6

Q ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCC
Q psy14136         10 DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEK   89 (534)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (534)
                      ++.+++|.+..++++..++.++|+..++...|.+                                              
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------   41 (406)
T PRK11551          8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRM----------------------------------------------   41 (406)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence            5666889999999999999999999999999888                                              


Q ss_pred             CCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14136         90 PNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQG  169 (534)
Q Consensus        90 P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G  169 (534)
                           .+++|+|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|++.|
T Consensus        42 -----~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G  114 (406)
T PRK11551         42 -----AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA--WDFPSLLVARLLTG  114 (406)
T ss_pred             -----HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence                 44899999999999999999999999999999999999999999999999988886554  68999999999999


Q ss_pred             hhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136        170 IASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP  248 (534)
Q Consensus       170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p  248 (534)
                      ++.+...+...+++.|++|+++|+++++ .+.+..+|..+++.+++.+.+..+||+.|++.+++.++..++..+++||+|
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  194 (406)
T PRK11551        115 VGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR  194 (406)
T ss_pred             hhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence            9999999999999999999999999999 557889999999999988888899999999988776766666666677765


Q ss_pred             CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhc---CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccc
Q psy14136        249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILT---SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTN  325 (534)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~  325 (534)
                      +..+..++++                ..+...+..++   .+..+...+..++.....+....|.|.|+++ .|++..+.
T Consensus       195 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~  257 (406)
T PRK11551        195 AFAQAAGAGK----------------QRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQA  257 (406)
T ss_pred             hHHhccCcch----------------hhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhh
Confidence            4321110000                00001111222   2333444444555555666777889999987 79999999


Q ss_pred             hhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcc
Q psy14136        326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASY  405 (534)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (534)
                      +.+.....++.+++.++.|++.||+++|+.+          ..+.+...+.++.+...+ +.+...+..++.+++.+...
T Consensus       258 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~  326 (406)
T PRK11551        258 GLVQIAFNIGGALGSLLIGALMDRLRPRRVV----------LLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFVVGGQ  326 (406)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhHH
Confidence            9999999999999999999999999988653          233333344444444444 44444444444555555556


Q ss_pred             cccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        406 AGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       406 ~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      +.......+..|++ |+++.|+.+....+|..++|.+.|.+.+.  .  .++...++..+.+.+++.++.+...
T Consensus       327 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~  396 (406)
T PRK11551        327 SVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL--G--RSTVGVIGASIPVILVAALAALLLV  396 (406)
T ss_pred             HHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc--C--CchHHHHHHHHHHHHHHHHHHHHHh
Confidence            66677788888866 99999999999999999999999999887  1  4566677766666666665555443

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=100.00  E-value=2.7e-36  Score=310.71  Aligned_cols=407  Identities=15%  Similarity=0.200  Sum_probs=289.5

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136         14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN   93 (534)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~   93 (534)
                      ++|.++...++.+...++++..++..+|.+                                                  
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l--------------------------------------------------   55 (452)
T PRK11273         26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYL--------------------------------------------------   55 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhHHH--------------------------------------------------
Confidence            456666667788999999999898888877                                                  


Q ss_pred             CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhh
Q psy14136         94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQGIA  171 (534)
Q Consensus        94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G~g  171 (534)
                       .++ |+|+.+.|++.+.+.+++++++++.|+++||+|||++++++.++.+++.+++++..  +.+++.+++.|++.|++
T Consensus        56 -~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~  133 (452)
T PRK11273         56 -VEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWF  133 (452)
T ss_pred             -HHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHH
Confidence             336 99999999999999999999999999999999999999999999999988866542  13678889999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHH-hhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIG-LTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~-~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      .+...+.....+.+++|+++|+++++++ .+.++|.. .+++++..+....|||+.|++.+++.++..++.++++||+|+
T Consensus       134 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~  213 (452)
T PRK11273        134 QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQ  213 (452)
T ss_pred             HhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence            9999998889999999999999999954 67777764 455544344344589999999988888877777777788766


Q ss_pred             CCcccchhhhhh-hhhccCccccCCCCCccc-HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136        250 KHPRITRKELDY-IQENIEPTIVGSKGLKVP-WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL  327 (534)
Q Consensus       250 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~  327 (534)
                      +....++++.+. ..+....++.++.+.+.. .+.++|+|.+|...+..++.+...+.+..|+|.|+++..|++..+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~  293 (452)
T PRK11273        214 SCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSW  293 (452)
T ss_pred             hcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            432221111110 000000000000011111 234678999999988888888888888999999999888999889998


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhccc
Q psy14136        328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYA  406 (534)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  406 (534)
                      +..+..++.+++.++.|+++||+++++..       ........+..+.+..+... ..+........+..+........
T Consensus       294 ~~~~~~~~~~~g~~~~G~l~dr~~~~r~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  366 (452)
T PRK11273        294 AYFLYEYAGIPGTLLCGWMSDKVFRGNRG-------ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVM  366 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCcc-------hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHH
Confidence            88888899999999999999999543221       00111122222222222121 11222222222222222211122


Q ss_pred             ccchhhhccCCCc-hhHHHHHHhHHHHhhhhH-HhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Q psy14136        407 GAMANVVDIGPNF-AGPILAFAQTIHMTASFL-SPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP  484 (534)
Q Consensus       407 ~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i-~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  484 (534)
                      .......|..|++ +|+++|+.+...++|+.+ +|.+.|++.|.     .+|+..|++.+++++++++....+.+.++|+
T Consensus       367 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~-----~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  441 (452)
T PRK11273        367 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FGWDGGFMVMIGGSILAVILLIVVMIGEKRH  441 (452)
T ss_pred             HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence            2234456777765 999999999999998765 79999999999     7899999998888888877777665554443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=100.00  E-value=3.1e-36  Score=311.42  Aligned_cols=394  Identities=14%  Similarity=0.114  Sum_probs=286.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCC
Q psy14136         15 RVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNE   94 (534)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~   94 (534)
                      ++..+...+..++..+.+...++..+|.+                                                   
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------------------------------------------   62 (476)
T PLN00028         34 HMRAFHLSWISFFTCFVSTFAAAPLLPII---------------------------------------------------   62 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence            34455556777888888877777666666                                                   


Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++  ++++.+++.|++.|++.+.
T Consensus        63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--~s~~~l~~~r~l~G~~~~~  140 (476)
T PLN00028         63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV--SSATGFIAVRFFIGFSLAT  140 (476)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHh
Confidence            55999999999999999999999999999999999999999999999999998886555  5889999999999999886


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh----h-----hcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI----A-----HYGWRSVFYTTGSLGAIWCVAWWFLA  244 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~----~-----~~gwr~~f~i~~~~~li~~i~~~~~~  244 (534)
                      . +....++++++|+++|++++++. ...++|..+++.+.+.+.    +     ..|||+.|++.++++++..++.+++.
T Consensus       141 ~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~  219 (476)
T PLN00028        141 F-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG  219 (476)
T ss_pred             h-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            5 45667899999999999999954 556667766665554432    2     25899999999998888777666665


Q ss_pred             cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc
Q psy14136        245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT  324 (534)
Q Consensus       245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~  324 (534)
                      ++.|+...    ++.+   +.   .+.++.+....+++.++++++|.+.+..++.......+..++|.|+.+.+|++..+
T Consensus       220 ~~~p~~~~----~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~  289 (476)
T PLN00028        220 QDLPDGNY----RELK---KS---GTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLET  289 (476)
T ss_pred             CcCCCCch----hhHH---hc---CccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHH
Confidence            55543321    0100   00   00000111224566788899988888777776667778889999998878999999


Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      ++.+.++..++.++++++.|+++||+++|+..+.   |+....+...+.++.++.+.... +.......+++.+++.+..
T Consensus       290 a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~---r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~l~~~~~~~~  365 (476)
T PLN00028        290 AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG---RLWALWIVQTLGGVFCIWLGRAN-SLGAAIVVMILFSIFVQAA  365 (476)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch---hHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998753211   23333344444444334443333 3333344444444544445


Q ss_pred             ccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        405 YAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       405 ~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      .+.......+..|+++|++.|+.+..+++|+.++|.+.+ ..+.     .+|+.+|++.+++.+++.++.++.+....
T Consensus       366 ~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~-----~~y~~~f~~~~~~~~i~~~~~~~~~~~~~  437 (476)
T PLN00028        366 CGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSS-----YSTETGISLMGVMIIACTLPVAFIHFPQW  437 (476)
T ss_pred             hhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCC-----ccHhhHHHHHHHHHHHHHHHHHheeccch
Confidence            555666667777888999999998877777777777654 1122     57999999999888888888777654443

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=100.00  E-value=5.2e-36  Score=317.39  Aligned_cols=401  Identities=13%  Similarity=0.135  Sum_probs=299.2

Q ss_pred             cchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136         12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN   91 (534)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~   91 (534)
                      .+++|.+++++.++++...+|...++.++|.+                                                
T Consensus       162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i------------------------------------------------  193 (742)
T TIGR01299       162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSA------------------------------------------------  193 (742)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------------------
Confidence            35677777888889999999999999888877                                                


Q ss_pred             CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14136         92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIA  171 (534)
Q Consensus        92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g  171 (534)
                         +++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++.++++++++++  ++++.++++|++.|++
T Consensus       194 ---~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa--~s~~~llv~R~l~G~g  268 (742)
T TIGR01299       194 ---EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV--QGYGFFLFCRLLSGFG  268 (742)
T ss_pred             ---HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHH
Confidence               45899999999999999999999999999999999999999999999999999887655  6899999999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh-------------cCCchhhhhhchhhHHHH
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH-------------YGWRSVFYTTGSLGAIWC  237 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~-------------~gwr~~f~i~~~~~li~~  237 (534)
                      .|+..+...+++.|++|+++|++.++ +..+..+|.++++.++..+...             .+||+.|++.++++++. 
T Consensus       269 ~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-  347 (742)
T TIGR01299       269 IGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-  347 (742)
T ss_pred             HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-
Confidence            99999999999999999999999999 5578889999998887666543             35899888877765554 


Q ss_pred             HHhhhhccCCCCCCcccc-hhhhh----hhhhc--------------------cCcc-----ccCCCCC-----------
Q psy14136        238 VAWWFLAFDAPLKHPRIT-RKELD----YIQEN--------------------IEPT-----IVGSKGL-----------  276 (534)
Q Consensus       238 i~~~~~~~~~p~~~~~~~-~~~~~----~~~~~--------------------~~~~-----~~~~~~~-----------  276 (534)
                      ++.++++||+|+...... .++..    ++...                    ....     +.+....           
T Consensus       348 ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (742)
T TIGR01299       348 IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSE  427 (742)
T ss_pred             HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhh
Confidence            455667899986421110 00000    00000                    0000     0000000           


Q ss_pred             ----cccHHHhhcC---HHHHHHHHHHHHHHHHHHHHHhchhhhhHhh----h-----------------CCccc-----
Q psy14136        277 ----KVPWVSILTS---PPAWAIGITTFGRIWVHYIFIIPGPRYMKTI----L-----------------GFSIQ-----  323 (534)
Q Consensus       277 ----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-----------------g~s~~-----  323 (534)
                          ...++++++.   ++.+.+++.+++..++++++..|+|.++.+.    +                 +++..     
T Consensus       428 ~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (742)
T TIGR01299       428 GGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHR  507 (742)
T ss_pred             hhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhcc
Confidence                0123445543   3567888888999999999999999886541    0                 00000     


Q ss_pred             --------------------------------------------------------------------------------
Q psy14136        324 --------------------------------------------------------------------------------  323 (534)
Q Consensus       324 --------------------------------------------------------------------------------  323 (534)
                                                                                                      
T Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~  587 (742)
T TIGR01299       508 GGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDF  587 (742)
T ss_pred             ccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccC
Confidence                                                                                            


Q ss_pred             --------cchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHH
Q psy14136        324 --------TNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWF  395 (534)
Q Consensus       324 --------~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (534)
                              .......+..++.+++.++.|+++||+|||+.+          .+++++.+++.+++.+.+ +....++..+
T Consensus       588 ~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l----------~~~~~lsai~~ll~~~~~-s~~~ll~~~~  656 (742)
T TIGR01299       588 DGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRML----------AGSMVLSCISCFFLSFGN-SESAMIALLC  656 (742)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHHc-cHHHHHHHHH
Confidence                    012334566688999999999999999998763          566666666666666655 4444444445


Q ss_pred             HHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        396 VAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      +.+++.+..++....++.|++|.+ |++++|+.++...+|++++|++.|.+.+.      +...+|++.+++.++++++.
T Consensus       657 l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------~~~~pf~i~a~~lll~~ll~  730 (742)
T TIGR01299       657 LFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI------TKAAPILFASAALACGGLLA  730 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHHHH
Confidence            556666667777888999999977 99999999999999999999999988766      35567888877777777777


Q ss_pred             HhhcCCccc
Q psy14136        475 QVLGTSEVQ  483 (534)
Q Consensus       475 ~~~~~~~~~  483 (534)
                      +++++++.+
T Consensus       731 ~~LPET~~~  739 (742)
T TIGR01299       731 LKLPDTRGQ  739 (742)
T ss_pred             HhCCCCccc
Confidence            777765543

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=100.00  E-value=6.2e-36  Score=297.87  Aligned_cols=349  Identities=12%  Similarity=0.075  Sum_probs=257.9

Q ss_pred             CCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         89 KPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSI  167 (534)
Q Consensus        89 ~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l  167 (534)
                      .|.+|. ++|+|+|+.+.|++.+.+.+++++++++.|+++||+|||+++..+++....+. ++ ....++++.++++|++
T Consensus        11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~R~l   88 (368)
T TIGR00903        11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GR-LLDPFNYEWLLACQLL   88 (368)
T ss_pred             HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HH-HHHhccHHHHHHHHHH
Confidence            344444 77999999999999999999999999999999999999987765555544443 22 2222589999999999


Q ss_pred             HhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        168 QGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      +|++.+. .+.....++|++|+++|+++++ ...+..+|.++++++++++.+++|||+.|++.++++++..++.++.+||
T Consensus        89 ~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~  167 (368)
T TIGR00903        89 AALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPA  167 (368)
T ss_pred             HHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999985 5666677799999999999999 5578999999999999999999999999999999888888888888898


Q ss_pred             CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136        247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG  326 (534)
Q Consensus       247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~  326 (534)
                      +|+++++..+.  +              +...++++++++|.+|.+.+..++.....+++.+|+|.|+++ .|++.. .+
T Consensus       168 ~p~~~~~~~~~--~--------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~  229 (368)
T TIGR00903       168 LPFQAAEGFGF--K--------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AG  229 (368)
T ss_pred             CCCCCCCCcch--H--------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HH
Confidence            77543211000  0              001246789999999999999999999999999999999987 678764 55


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccc
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYA  406 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (534)
                      ....+..+.+.++   .+++.||..|++.      |+........+.++.+..+.... +....+....+.+++.....+
T Consensus       230 ~~~~l~~~~g~~g---~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~  299 (368)
T TIGR00903       230 DAVALAILAGLIG---VAVIPDRVARAGL------RSIYIRAAALLIAAFFLALAFEL-NRLALFAFIGIAGLLMLPAYA  299 (368)
T ss_pred             HHHHHHHHHHHHH---HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHHhhhhhHH
Confidence            5555555544444   5788888876532      11112222233333333434333 333334444445555555556


Q ss_pred             ccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        407 GAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       407 ~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                      ..+.+..|.+|++ ||++.|+.+..+++++..+|.+.+.+..       +....|.+.++..+++.+..+
T Consensus       300 ~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-------~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       300 IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-------SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-------CHHHHHHHHHHHHHHHHHHHH
Confidence            6778888999986 9999999999999999999999887763       345566666776666666654

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=100.00  E-value=2.4e-36  Score=310.68  Aligned_cols=393  Identities=14%  Similarity=0.155  Sum_probs=292.1

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      .++|.++..++++....+.++..++..++.+                                                 
T Consensus        15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i-------------------------------------------------   45 (455)
T TIGR00892        15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKEL-------------------------------------------------   45 (455)
T ss_pred             CcchHHHHHHHHHHHHHHhhhcchhhhHHHH-------------------------------------------------
Confidence            5678888888888888888888888888877                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIA-LRSIQGIA  171 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~-~r~l~G~g  171 (534)
                        ++++|++.++.+++.+.+.++..++.++.|+++||+|||++++.++++.+++.++++++  ++++.+++ .|++.|++
T Consensus        46 --~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~l~G~~  121 (455)
T TIGR00892        46 --QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS--SNVIELYLTAGFITGLG  121 (455)
T ss_pred             --HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhc
Confidence              55999999999999999999999999999999999999999999999999999887665  57877764 57999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK  250 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~  250 (534)
                      .+...+...+++.++++ ++|+++.+ ...+..+|..+++++++.+.+.+|||++|++.+++.++..+..++..++.+.+
T Consensus       122 ~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~  200 (455)
T TIGR00892       122 LAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQ  200 (455)
T ss_pred             chhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence            99877888889999995 78999999 45788999999999999999999999999999988777665555444432211


Q ss_pred             CcccchhhhhhhhhccCcc-cc-CCCC--CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136        251 HPRITRKELDYIQENIEPT-IV-GSKG--LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG  326 (534)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~  326 (534)
                      +....+++.....+...++ .. ...+  .+....+++++|.++...+..++..........++|.|+++ .|++..+++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g  279 (455)
T TIGR00892       201 RVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAA  279 (455)
T ss_pred             ccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHH
Confidence            1000000000000000000 00 0000  01111257889999988888887777777888899999987 799999999


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHh--hhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQLF--VRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      .+.++.+++.++++++.+++.||..  +++.        .....+..+.++.++.....+ +.+..++..++.+++.+..
T Consensus       280 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~--------~~~~~~~~~~~l~~ll~~~~~-~~~~~~i~~~~~G~~~g~~  350 (455)
T TIGR00892       280 FLLSIIGFVDIFARPSCGLIAGLKWIRPHVQ--------YLFSFALLFNGLTHLLCALAG-DYTGLVIYCIFFGLSFGSV  350 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccCHHHH--------HHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhchH
Confidence            9999999999999999999999732  2211        112233333333333333333 5555555566666666676


Q ss_pred             ccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        405 YAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       405 ~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      .+.....+.+..|++ ++++.|+.+....+|.+++|.+.|.+.+.  .  .+|+..|++.+++.+++.+.
T Consensus       351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~--~--g~~~~~f~~~~~~~li~~~~  416 (455)
T TIGR00892       351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA--T--KNYKYIFYASGSIVVSAGLF  416 (455)
T ss_pred             HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh--c--CCcchHHHHhhHHHHHHHHH
Confidence            777777777877765 99999999999999999999999999987  1  35888888887776665553

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=100.00  E-value=1.4e-35  Score=303.67  Aligned_cols=383  Identities=13%  Similarity=0.084  Sum_probs=264.1

Q ss_pred             CcC-CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhcccc
Q psy14136          7 RFT-DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTM   85 (534)
Q Consensus         7 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (534)
                      |.+ ...++|+..++..+++++++++|+..++.+.|.+.+                                        
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~----------------------------------------   50 (432)
T PRK10406         11 KLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAH----------------------------------------   50 (432)
T ss_pred             ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------
Confidence            443 344455666767788999999999999999988833                                        


Q ss_pred             ccCCCCCCCCccc---cCChhhHHHHH---HHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHH-
Q psy14136         86 LLEKPNVNEEGEF---DWDTTTQGAIL---SSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHY-  158 (534)
Q Consensus        86 ~~~~P~~~~~~~~---~~s~~~~g~~~---s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~-  158 (534)
                                 ++   +.+..+.+...   +..+++..++++++|+++||+|||+++.++++++++++++++++  +++ 
T Consensus        51 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~  117 (432)
T PRK10406         51 -----------IFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACL--PGYE  117 (432)
T ss_pred             -----------HhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhc--CCch
Confidence                       44   34455444444   44555555999999999999999999999999999999997665  344 


Q ss_pred             -------HHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh--------hhcCC
Q psy14136        159 -------GALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI--------AHYGW  222 (534)
Q Consensus       159 -------~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~--------~~~gw  222 (534)
                             ..++++|+++|++.|..++...+++.|++|+++|+++.++ ..+...|.++++.+...+.        ..+||
T Consensus       118 ~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW  197 (432)
T PRK10406        118 TIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGW  197 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccch
Confidence                   4689999999999999999999999999999999999884 4667777777776654443        25799


Q ss_pred             chhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHH-HHH
Q psy14136        223 RSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFG-RIW  301 (534)
Q Consensus       223 r~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  301 (534)
                      |++|++.++++++.. .....+||+|+.       +.+.            +++..++++++++|+.+...+...+ ...
T Consensus       198 r~~F~i~~~~~ll~~-~~~~~~~e~~~~-------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  257 (432)
T PRK10406        198 RIPFALGAVLAVVAL-WLRRQLDETSQQ-------ETRA------------LKEAGSLKGLWRNRRAFIMVLGFTAAGSL  257 (432)
T ss_pred             HHHHHHHHHHHHHHH-HHHhcCCCCchH-------HHhh------------hcccccHHHHHhhHHHHHHHHHHHHHHHH
Confidence            999998777666542 223334443321       1000            0012357788899888876665554 366


Q ss_pred             HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH-HH
Q psy14136        302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVM-LI  380 (534)
Q Consensus       302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~  380 (534)
                      .++.+.+|+|.|+++.+|.+..+.+.......++..++.++.|+++||++||+.+          .+..++.++... ..
T Consensus       258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~~~~  327 (432)
T PRK10406        258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSM----------LCFGSLAALFTVPIL  327 (432)
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHH
Confidence            7788889999999887899988888888888888888999999999999988653          122221111111 11


Q ss_pred             --hhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccccccChhhH
Q psy14136        381 --GYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQDDETSLESW  456 (534)
Q Consensus       381 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~~~~~~~~  456 (534)
                        .....+.........+..+..+...+....+..|.+|++ |+++.|+.+..+++ ++...|.+.+.+ +.  .  +.|
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~--~--g~~  402 (432)
T PRK10406        328 SALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KS--I--GME  402 (432)
T ss_pred             HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HH--h--CCC
Confidence              111112222222222233333333444567788999876 99999999988765 344577777755 44  1  345


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh
Q psy14136        457 RQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       457 ~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ...+++.+++.+++++..+++
T Consensus       403 ~~~~~~~~~~~~i~~~~~~~l  423 (432)
T PRK10406        403 TAFFWYVTLMAVVAFLVSLML  423 (432)
T ss_pred             cHHHHHHHHHHHHHHHHHHHh
Confidence            566666666666666665554

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=100.00  E-value=9.5e-36  Score=309.76  Aligned_cols=372  Identities=12%  Similarity=0.048  Sum_probs=295.1

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136         14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN   93 (534)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~   93 (534)
                      ++|..+..+++++++...|++.++.++|.+                                                  
T Consensus         3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i--------------------------------------------------   32 (495)
T PRK14995          3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTL--------------------------------------------------   32 (495)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------
Confidence            467778889999999999999999999999                                                  


Q ss_pred             CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                       .+|+|.+.++.+|+.+.|.++++++.+++|+++||+|||++++++.+++++++++++++  +|++.++++|+++|+|.+
T Consensus        33 -~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a--~~~~~li~~r~l~G~g~~  109 (495)
T PRK14995         33 -SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS--PTASWLIATRALLAIGAA  109 (495)
T ss_pred             -HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH
Confidence             55999999999999999999999999999999999999999999999999999998766  699999999999999999


Q ss_pred             chhhhHHHHHhccc-CCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136        174 LTWPAMYALVGHWI-PSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH  251 (534)
Q Consensus       174 ~~~~~~~~~i~~~~-~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~  251 (534)
                      ...+.....+.+++ |+++|+++++++ ....+|..+||.+++++.+++|||+.|++...++++..++.++++|++++++
T Consensus       110 ~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~  189 (495)
T PRK14995        110 MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR  189 (495)
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99998888887776 678999999954 7889999999999999999999999999998888887777777777765432


Q ss_pred             cccchh-hhh-----------hhhhccCcc----------------------ccCCCCCcccHHHhhcCHHHHHHHHHHH
Q psy14136        252 PRITRK-ELD-----------YIQENIEPT----------------------IVGSKGLKVPWVSILTSPPAWAIGITTF  297 (534)
Q Consensus       252 ~~~~~~-~~~-----------~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (534)
                      .+..+. ...           ...+.....                      .+...+.+.-..+++|+|.++...+..+
T Consensus       190 ~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~  269 (495)
T PRK14995        190 DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAM  269 (495)
T ss_pred             CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHH
Confidence            211110 000           000000000                      0011111222356889999888888888


Q ss_pred             HHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHH
Q psy14136        298 GRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLV  377 (534)
Q Consensus       298 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~  377 (534)
                      +.....++...+.|.|+++.+|+++.+++....+..++..++.++.|++.||+++|+.+          ..+.++..++.
T Consensus       270 ~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~g~~~~~~~~  339 (495)
T PRK14995        270 TAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA----------TGGMALSALSF  339 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHH
Confidence            88888888888999999999999999999999999999999999999999999987642          34444444444


Q ss_pred             HHHhhc--CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        378 MLIGYL--GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       378 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ..+...  ..+.+......++.+++.+...+.......+..|++ ++.+.++.++...+|+.+|+.+.|.+.+.
T Consensus       340 ~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~  413 (495)
T PRK14995        340 YGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR  413 (495)
T ss_pred             HHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333222  223444455666677777777776777777766655 99999999999999999999999988765

>PRK03699 putative transporter; Provisional

Probab=100.00  E-value=2.9e-35  Score=297.90  Aligned_cols=380  Identities=14%  Similarity=0.145  Sum_probs=293.8

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      ++|+.+...+++++++...+...++..+|++                                                 
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i-------------------------------------------------   33 (394)
T PRK03699          3 SNRIKLTWISFLSYALTGALVIVTGMVMGPI-------------------------------------------------   33 (394)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhhHHH-------------------------------------------------
Confidence            4556666677889999999999999999888                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~  172 (534)
                        ++++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++++++  ++++.+++.|+++|++.
T Consensus        34 --~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~--~~~~~~~~~~~l~G~~~  109 (394)
T PRK03699         34 --AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS--HSLALFSIAMFVLGVVS  109 (394)
T ss_pred             --HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc--chHHHHHHHHHHHHHhh
Confidence              55899999999999999999999999999999999999999999999999999887655  68999999999999999


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh-hcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA-HYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK  250 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~  250 (534)
                      +...+...+++.|++|+++|+++++ ......+|..++|.+.+.+.. ..|||+.|++.+++.++..++.++  ++.|+.
T Consensus       110 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~  187 (394)
T PRK03699        110 GITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPAL  187 (394)
T ss_pred             HhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccc
Confidence            9999999999999999999999999 457788888999988887764 579999999888777665544332  222221


Q ss_pred             CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136        251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG  330 (534)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~  330 (534)
                      .++.+ ++          +   .+..    ++ ..++.++...+..++.....+.+..|+|.|+++.+|+++.+.+.+.+
T Consensus       188 ~~~~~-~~----------~---~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~  248 (394)
T PRK03699        188 GKHAP-KA----------D---KPVA----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVS  248 (394)
T ss_pred             cccCc-cc----------c---Cccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHH
Confidence            11000 00          0   0000    01 12466777777777777778888899999998889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccch
Q psy14136        331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMA  410 (534)
Q Consensus       331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (534)
                      ...++..+++++.+++.||+++|+.+          .....+..+.+.++...+ +........+..+++.+..++....
T Consensus       249 ~~~~~~~ig~~~~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~  317 (394)
T PRK03699        249 NFWMAYMVGMWIFSFIVRFFDLQRIL----------TVLAGLALVLMYLFVNTD-DPSHLLYAILGLGFFSSAIYTTIIT  317 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhchhhHH----------HHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999998753          223333333334443333 4444444455555555666666666


Q ss_pred             hhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        411 NVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       411 ~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      ...+..|+++++..|......++|..++|.+.|++.+.     .+++..++..+++.+++.+..+...+..|
T Consensus       318 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (394)
T PRK03699        318 LGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAH-----FGLQAALLTANGLYAVVFVMCILLGFVSK  384 (394)
T ss_pred             HHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----hCchhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            66677777777888999999999999999999999998     78889998888888777666655554433

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.8e-35  Score=280.72  Aligned_cols=384  Identities=18%  Similarity=0.198  Sum_probs=327.4

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      +.+...+.+.++++.+.|+-...+++..+.|                                                 
T Consensus        10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i-------------------------------------------------   40 (417)
T COG2223          10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFI-------------------------------------------------   40 (417)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------------------------------------
Confidence            4445566678899999999999999999888                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV-LHYGALIALRSIQGIA  171 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~-~~~~~l~~~r~l~G~g  171 (534)
                        ++|+|+|+.|.+++.++..+..++..++.|.+.||||.|++..+++++..+.++..+++.. ++++.+++++++.|++
T Consensus        41 --~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~  118 (417)
T COG2223          41 --KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA  118 (417)
T ss_pred             --ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc
Confidence              5699999999999999999999999999999999999999999999999999999777742 2456999999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcC---CchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYG---WRSVFYTTGSLGAIWCVAWWFLAFDAP  248 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---wr~~f~i~~~~~li~~i~~~~~~~~~p  248 (534)
                       |....+...+++.|+||+++|.++|++...|+|..+...++..+....|   ||....+..+..++..+..++...|.|
T Consensus       119 -GasFav~m~~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p  197 (417)
T COG2223         119 -GASFAVGMPNASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVP  197 (417)
T ss_pred             -cceehcccccccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence             5578999999999999999999999888999999999999999988888   999999999888888888888888877


Q ss_pred             CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhH
Q psy14136        249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLL  328 (534)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~  328 (534)
                      +.++..++.+                  +..++.++++++.|.+++.++..+.++.++..++|.|+++++|.++.+++.+
T Consensus       198 ~~r~~~~~~~------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~  259 (417)
T COG2223         198 EHRASVKPQL------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLI  259 (417)
T ss_pred             hhhccccccc------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Confidence            6432211110                  0346778899999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC------CchhHHHHHHHHHHHHhh
Q psy14136        329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG------CNVALVLITWFVAVTLIT  402 (534)
Q Consensus       329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  402 (534)
                      .....+.+.+.++++|+++||+|.+|.+          .+.+..+.++........      .+.......++..+.+.+
T Consensus       260 a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~----------~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G  329 (417)
T COG2223         260 AFLFPLIGALARPLGGWLSDRIGGRRVT----------LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAG  329 (417)
T ss_pred             HHHHHHHHHHHHhccchhhhhccchhHH----------HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhc
Confidence            9999999999999999999999998874          344444444444444442      345566666777778888


Q ss_pred             hcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        403 ASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       403 ~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      ......+..+..++|++.|.+.|+...++.+|++.-|...|...+.  +  ..+...|++...+.+++.+.......+
T Consensus       330 ~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~--t--g~~~~~f~~~~~~~~~a~v~~~~~y~r  403 (417)
T COG2223         330 LGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDL--T--GSYTGAFMLLLAFYLVALVLTWALYAR  403 (417)
T ss_pred             cCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHh--c--ccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888899999999999999999999999999999999999999998  3  358999999999888888776655443

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=100.00  E-value=6.2e-35  Score=295.07  Aligned_cols=347  Identities=15%  Similarity=0.133  Sum_probs=263.3

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..++++++++.++++++  ++++.++++|+++|++.+.
T Consensus        36 ~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a--~~~~~ll~~r~l~Gig~~~  113 (393)
T PRK09705         36 RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY--PQSALLLSSALLGGVGIGI  113 (393)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC--cchHHHHHHHHHHHhHHHH
Confidence            66999999999999999999999999999999999999999999999999999997766  6999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      ..+....++.+++| ++|+++++.+ .+..+|..+++.+++++.++. +||+.+.+.++..++..+..++..++.|++++
T Consensus       114 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (393)
T PRK09705        114 IQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH  192 (393)
T ss_pred             HhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence            99999999999996 7899999955 678899999999999988875 89999877666554433322222222221100


Q ss_pred             ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136        253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP  332 (534)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~  332 (534)
                            .              +  +...++.+++|+.|...+..++....+.....|.|.|+++ +|.+..+++.+.++.
T Consensus       193 ------~--------------~--~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~  249 (393)
T PRK09705        193 ------K--------------T--TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALM  249 (393)
T ss_pred             ------C--------------C--CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHH
Confidence                  0              0  0012345677888888777777778888899999999987 799999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      .++.++++++.+++.||+++|+..          ..+..+..+....+...+.+....  ..++.+++.+...+......
T Consensus       250 ~i~~i~g~~~~g~l~~r~~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~  317 (393)
T PRK09705        250 TLGQAAGALLMPAMARHQDRRKLL----------MLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLA  317 (393)
T ss_pred             HHHHHHHHHHHHHHHhhccchHHH----------HHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHH
Confidence            999999999999999999987653          333344334333333233222222  22333445555555554444


Q ss_pred             hccC-CCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh-cCCccc
Q psy14136        413 VDIG-PNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL-GTSEVQ  483 (534)
Q Consensus       413 ~~~~-p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~-~~~~~~  483 (534)
                      .+.. |++ +|+.+|+.+...++++.++|.+.|++.|.  .  ++|...|++.++++++..++...+ ++++.+
T Consensus       318 ~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~--~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (393)
T PRK09705        318 LDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSI--S--GNYLMDWAFHALCVVGLMIITLRFAPARFPQ  387 (393)
T ss_pred             HhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--CCchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            4544 444 99999999999999999999999999998  2  358888888877777666665444 444333

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=100.00  E-value=2.1e-35  Score=297.11  Aligned_cols=343  Identities=17%  Similarity=0.164  Sum_probs=268.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|++.|++.+.
T Consensus        30 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~  107 (377)
T TIGR00890        30 GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA--DSLAALYLTYGLASAGVGI  107 (377)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH--HHHHHHHHHHHHHhHHHHH
Confidence            55999999999999999999999999999999999999999999999999999886665  6999999999999999998


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+.....+.+++| ++|+++.++. .+.++|..+++++.+.+.+..|||+.|++.+++.++..+..+++.+++|++..+
T Consensus       108 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (377)
T TIGR00890       108 AYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIK  186 (377)
T ss_pred             HHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccc
Confidence            88889999999996 6799999954 778899888777777777788999999999988888777776666654432111


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                      .+ ++              .+.++...++.+++|.++...+..++..........+.+.|.++ +|.+..+.+.+.+...
T Consensus       187 ~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  250 (377)
T TIGR00890       187 TN-IE--------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISS  250 (377)
T ss_pred             cC-cc--------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence            00 00              01112245678888888887777776666666666677777765 7888888889999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN-VALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      ++.++++++.|++.||++||+.+          .++..+..+....+...+.. ........++.+++.+...+......
T Consensus       251 ~~~~~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~  320 (377)
T TIGR00890       251 IFNGGGRPFLGALSDKIGRQKTM----------SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLV  320 (377)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhh----------hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHH
Confidence            99999999999999999998763          34444444444444444321 22222333444555555555566677


Q ss_pred             hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHH
Q psy14136        413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTY  471 (534)
Q Consensus       413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~  471 (534)
                      .|..|++ |+++.|+.+....+|..++|.+.|.+.+.     .+|+..|++.+++.++++
T Consensus       321 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       321 SDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE-----IGFEYTFIVTGAFALTSL  375 (377)
T ss_pred             HHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-----hchhhHHHHHHHHHHHhc
Confidence            7888766 99999999999999999999999999998     789999998887776654

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=100.00  E-value=2.7e-34  Score=290.24  Aligned_cols=337  Identities=15%  Similarity=0.154  Sum_probs=261.8

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|+++++.|+..+++.++..+++++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|+++|++.+.
T Consensus        47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~  124 (394)
T PRK10213         47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA--NSFSLLLIGRACLGLALGG  124 (394)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH--ChHHHHHHHHHHHHHhhHH
Confidence            55899999999999999999999999999999999999999999999999999887664  6899999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|+++++ ...+.++|..+++++++.+.+++|||+.|++.++++++..+..+...||.|++++ 
T Consensus       125 ~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~-  203 (394)
T PRK10213        125 FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS-  203 (394)
T ss_pred             HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc-
Confidence            99999999999999999999999 5578899999999999999999999999999887776655444444454331110 


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                                           +.....++.+++|.++...+..++.....+...++.+.++.+.+|++..+.+.+....+
T Consensus       204 ---------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~  262 (394)
T PRK10213        204 ---------------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFG  262 (394)
T ss_pred             ---------------------cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHH
Confidence                                 01113456888999988777766666666666667644444457999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                      ++.+++.++.+++.||.+++..          .....+.....+++....+ +.+......++.+++.+...+.....++
T Consensus       263 ~~~iig~~~~~~l~~r~~~~~l----------~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~  331 (394)
T PRK10213        263 IASFVGTSLSSFILKRSVKLAL----------AGAPLVLAVSALVLTLWGS-DKIVATGVAIIWGLTFALVPVGWSTWIT  331 (394)
T ss_pred             HHHHHHHHHHHHHHhccchhHH----------HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            9999999999999998543321          1222222222222222333 4445555566666677777777777777


Q ss_pred             ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHH
Q psy14136        414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTY  471 (534)
Q Consensus       414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~  471 (534)
                      +..|+++++..++.....++|..+||.+.|.+.|.     .++...++..+.+.++..
T Consensus       332 ~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~  384 (394)
T PRK10213        332 RSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDN-----IGLTSPLMLSGTLMLLTA  384 (394)
T ss_pred             HHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhhHHHHHHHHHHHHH
Confidence            77787778888888888899999999999999998     788888887766554443

>PRK09952 shikimate transporter; Provisional

Probab=100.00  E-value=1.8e-34  Score=295.69  Aligned_cols=390  Identities=17%  Similarity=0.156  Sum_probs=270.2

Q ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCC
Q psy14136         10 DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEK   89 (534)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (534)
                      ...++++......+++++++++|+..++...+.+.+                                            
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------------------------------------------   50 (438)
T PRK09952         15 LSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFN--------------------------------------------   50 (438)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------
Confidence            344566667777889999999999999977664422                                            


Q ss_pred             CCCCCCccc--cCChhhHHHHH-----HHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH---
Q psy14136         90 PNVNEEGEF--DWDTTTQGAIL-----SSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG---  159 (534)
Q Consensus        90 P~~~~~~~~--~~s~~~~g~~~-----s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~---  159 (534)
                            +++  +.++. .+++.     ++.+++..+++++.|+++||+|||+++..+.+++++++++++++  +++.   
T Consensus        51 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~  121 (438)
T PRK09952         51 ------REFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLL--PSFSTIG  121 (438)
T ss_pred             ------HhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcC--CcHHHHH
Confidence                  122  34444 35443     45667788999999999999999999999999999999997766  5665   


Q ss_pred             -----HHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh--------hcCCchh
Q psy14136        160 -----ALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA--------HYGWRSV  225 (534)
Q Consensus       160 -----~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~--------~~gwr~~  225 (534)
                           .++++|+++|++.|..++....++.|++|+++|++..+ ...+..+|.+++..+...+..        .+|||++
T Consensus       122 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~  201 (438)
T PRK09952        122 WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIP  201 (438)
T ss_pred             HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHH
Confidence                 58899999999999999999999999999999999988 557888888888777666542        5799999


Q ss_pred             hhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHH-HHHHHHHHHH
Q psy14136        226 FYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGI-TTFGRIWVHY  304 (534)
Q Consensus       226 f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  304 (534)
                      |++.+++.++. +......||+|+..+   .+++.  +        +.+++....+.++++|+.+...+ ..++.....+
T Consensus       202 f~~~~~~~l~~-~~l~~~~~es~~~~~---~~~~~--~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  267 (438)
T PRK09952        202 FLFSIVLVLIA-LWVRNGMEESAEFEQ---QQHEQ--A--------AAKKRIPVIEALLRHPGAFLKIIALRLCELLTMY  267 (438)
T ss_pred             HHHHHHHHHHH-HHHHHhCCCChhHHH---HHhhc--c--------cccccCCHHHHHHHchHHHHHHHHHHHHHHHHHH
Confidence            99887665442 222223344432110   00000  0        00001112234667777666544 4455566777


Q ss_pred             HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH--hh
Q psy14136        305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI--GY  382 (534)
Q Consensus       305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~  382 (534)
                      ....|.|.|+++.+|.+......+....++..+++.++.|+++||++||+.+          ..+.++..+....+  ..
T Consensus       268 ~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~  337 (438)
T PRK09952        268 IVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY----------ITGALIGTLSAFPFFMAL  337 (438)
T ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH
Confidence            7888999999888888876655555566777888899999999999998753          22222222222111  11


Q ss_pred             -cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHH-HhhhhHHhHhhhhcccccccChhhHHHH
Q psy14136        383 -LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIH-MTASFLSPMVAGYFLQDDETSLESWRQV  459 (534)
Q Consensus       383 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~-~~g~~i~~~~~g~l~~~~~~~~~~~~~~  459 (534)
                       ............++.+++.+...+....+..|.+|.+ |+++.|+.+... .+++.++|.+.+++.+.  .+ .+|...
T Consensus       338 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~--~~-~~~~~~  414 (438)
T PRK09952        338 EAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTY--FG-GSWHSV  414 (438)
T ss_pred             HcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--cC-CCchHH
Confidence             2212333333344445555666666778888999876 999999876664 48999999999999885  11 357788


Q ss_pred             HHHHHHHHHHHHHHHHhhcC
Q psy14136        460 FLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       460 f~~~~~~~~~~~~~~~~~~~  479 (534)
                      +...+++.+++++..+..++
T Consensus       415 ~~~~~~~~~i~~v~~~~~~~  434 (438)
T PRK09952        415 AIYLLAGCLISAMTALLMKD  434 (438)
T ss_pred             HHHHHHHHHHHHHHHHHccc
Confidence            88888888877777666543

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=100.00  E-value=7.7e-34  Score=289.00  Aligned_cols=358  Identities=14%  Similarity=0.058  Sum_probs=279.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136         12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN   91 (534)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~   91 (534)
                      .++.+...+.+.++.++.++....+...+|.+                                                
T Consensus         8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------------   39 (406)
T PRK15402          8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAV------------------------------------------------   39 (406)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHH------------------------------------------------
Confidence            35556666667778888888888888777766                                                


Q ss_pred             CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14136         92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIA  171 (534)
Q Consensus        92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g  171 (534)
                         .+++|+|+.+.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|+++|++
T Consensus        40 ---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~  114 (406)
T PRK15402         40 ---VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA--QSIEQFTLLRFLQGIG  114 (406)
T ss_pred             ---HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHhH
Confidence               55899999999999999999999999999999999999999999999999998886554  6899999999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK  250 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~  250 (534)
                      .+...+...+++.|++|+++|.+..++ .....+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||++++
T Consensus       115 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (406)
T PRK15402        115 LCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGR  194 (406)
T ss_pred             hhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcc
Confidence            998889999999999999999999994 4667789999999999999989999999998888887766666666665432


Q ss_pred             CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136        251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG  330 (534)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~  330 (534)
                      .++..  +.              ++...++++++++|.++...+..++..........+.|.++++.+|+++.+.+....
T Consensus       195 ~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~  258 (406)
T PRK15402        195 VGEKL--SL--------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQV  258 (406)
T ss_pred             ccccc--cH--------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHH
Confidence            11100  00              011234567889999988887777776666667777899988888999988888877


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh----cCCchhHHHHHHHHHHHHhhhccc
Q psy14136        331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY----LGCNVALVLITWFVAVTLITASYA  406 (534)
Q Consensus       331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  406 (534)
                      ...++.+++.++.+++.||+++|+..          .++.++..++...+..    ...+.++.....++.+++.+...+
T Consensus       259 ~~~~~~~~g~~~~g~l~~r~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  328 (406)
T PRK15402        259 PVFGALIAGNLTLARLTSRRPLRSLI----------RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANA  328 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhh
Confidence            77888999999999999999988653          3333333333333222    122344445555666666666665


Q ss_pred             ccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        407 GAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       407 ~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ..........|+++|++.++.+....++..+|+.+.+.+.+.
T Consensus       329 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~  370 (406)
T PRK15402        329 GLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG  370 (406)
T ss_pred             hHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            555555444566699999999999999999999999999888

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=100.00  E-value=1.4e-34  Score=296.92  Aligned_cols=403  Identities=16%  Similarity=0.210  Sum_probs=287.1

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCC
Q psy14136         14 ARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVN   93 (534)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~   93 (534)
                      .+|..+..+.+.++..+.++..+....|.+                                                  
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--------------------------------------------------   53 (438)
T TIGR00712        24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYL--------------------------------------------------   53 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccHHhhhHHH--------------------------------------------------
Confidence            456666777888999999999888887766                                                  


Q ss_pred             CCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhh
Q psy14136         94 EEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQGIA  171 (534)
Q Consensus        94 ~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G~g  171 (534)
                       + ++|+|+++.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++..  ..+++.+.+.|++.|++
T Consensus        54 -~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~  131 (438)
T TIGR00712        54 -V-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWF  131 (438)
T ss_pred             -H-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Confidence             3 3599999999999999999999999999999999999999999999999888754431  13677888999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh-hhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI-AHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      .+..++.....+.|++|+++|++++++ ..+.++|..+++++.+.+. ...+||..|++.++++++..++.++++||+|+
T Consensus       132 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~  211 (438)
T TIGR00712       132 QGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQ  211 (438)
T ss_pred             hhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence            999999999999999999999999995 4788899998888776544 45789999999998888877777777787665


Q ss_pred             CCcccchhhhh-hhhhccCccccCCCCCccc-HHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136        250 KHPRITRKELD-YIQENIEPTIVGSKGLKVP-WVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL  327 (534)
Q Consensus       250 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~  327 (534)
                      +.+..+.++.+ +..+...++.+++.+.+.. .+.+++++.+|...+..++.....+++.+|+|.|+++..|+++.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~  291 (438)
T TIGR00712       212 SCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSW  291 (438)
T ss_pred             hcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHH
Confidence            42211111000 0000000000000001111 234788999999888888877888888899999999888999999999


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHhhhccc
Q psy14136        328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWFVAVTLITASYA  406 (534)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  406 (534)
                      ...+..+.++++.++.|++.||+++++...       ..........+....+...+ .+.+......+..+++......
T Consensus       292 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  364 (438)
T TIGR00712       292 AYFLYEYAGIPGTLLCGWMSDKVFKGNRGA-------TGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVM  364 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCcccH-------HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHH
Confidence            999999999999999999999997554320       01111111111111111111 1222222222222222111111


Q ss_pred             ccchhhhccCCCc-hhHHHHHHhHHHHhhh-hHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        407 GAMANVVDIGPNF-AGPILAFAQTIHMTAS-FLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       407 ~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~-~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      .......+..|++ ||++.|+.+...++++ .++|.+.|.+.|.     .+|+.+|++.+++.+++.+..+++.++
T Consensus       365 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~  435 (438)
T TIGR00712       365 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FGWDGGFMVMIGGSILAVILLIVVMIG  435 (438)
T ss_pred             HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence            1123456777765 9999999999988875 6899999999998     789999988888777777776665443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=100.00  E-value=1.3e-34  Score=294.62  Aligned_cols=385  Identities=16%  Similarity=0.169  Sum_probs=277.3

Q ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCC
Q psy14136         10 DAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEK   89 (534)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (534)
                      +..+++|..+..++++++..++++..++.+.|.+                                              
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------------------------------------------   38 (405)
T TIGR00891         5 HLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEV----------------------------------------------   38 (405)
T ss_pred             cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------------
Confidence            3456778888889999999999999999999888                                              


Q ss_pred             CCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14136         90 PNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQG  169 (534)
Q Consensus        90 P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G  169 (534)
                           ++++|+++.+.|++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++  ++++.+++.|++.|
T Consensus        39 -----~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G  111 (405)
T TIGR00891        39 -----AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFA--PGYITMFIARLVIG  111 (405)
T ss_pred             -----HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence                 55899999999999999999999999999999999999999999999999999886555  68999999999999


Q ss_pred             hhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcC--CchhhhhhchhhHHHHHHhhhhccC
Q psy14136        170 IASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYG--WRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g--wr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      ++.+...+...+++.|++|+++|+++.+ ...+..+|.++++.+++.+.+..+  ||+.|++.+++.++. ++.....||
T Consensus       112 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~  190 (405)
T TIGR00891       112 IGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPE  190 (405)
T ss_pred             hhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCC
Confidence            9999999999999999999999999999 457889999999999999888766  999998866554443 333444566


Q ss_pred             CCCCCcccchhh-h-hhhhhccCccccCCC---CCcccHHHhh-cC-HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC
Q psy14136        247 APLKHPRITRKE-L-DYIQENIEPTIVGSK---GLKVPWVSIL-TS-PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG  319 (534)
Q Consensus       247 ~p~~~~~~~~~~-~-~~~~~~~~~~~~~~~---~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  319 (534)
                      +++..+..++++ . +..++....+.....   ......++.. +. +.+...................+.|.|+.+.+|
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  270 (405)
T TIGR00891       191 AEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLG  270 (405)
T ss_pred             ChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhC
Confidence            443211111100 0 000000000000000   0000011111 11 112233333344445555667788999988889


Q ss_pred             CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q psy14136        320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVT  399 (534)
Q Consensus       320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (534)
                      ++..+.+.+.+...++.+++.++.+++.||+++|+.+          .++.++.............+.+...+..++.++
T Consensus       271 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (405)
T TIGR00891       271 LSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY----------VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQM  340 (405)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh----------HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998764          223222222222111122233333344344444


Q ss_pred             HhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHH
Q psy14136        400 LITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIA  463 (534)
Q Consensus       400 ~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~  463 (534)
                      +.+...+.....+.|..|++ |++++|+.+...++|+.++|.+.|.+.|.     .| |+..+...
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-----~g~~~~~~~~~  401 (405)
T TIGR00891       341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR-----LDEYGTALASL  401 (405)
T ss_pred             HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHhh
Confidence            44555566667778888866 99999999999999999999999999998     55 76666553

>PRK10091 MFS transport protein AraJ; Provisional

Probab=100.00  E-value=4.3e-34  Score=288.13  Aligned_cols=345  Identities=17%  Similarity=0.169  Sum_probs=257.4

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++|+|++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|++.|++.+.
T Consensus        30 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~--~~~~~l~~~r~l~G~~~~~  107 (382)
T PRK10091         30 AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS--SSYLMLAIGRLVSGFPHGA  107 (382)
T ss_pred             HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhhHH
Confidence            55899999999999999999999999999999999999999999999999999987665  6999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+....++.+++|+++|+++++. ..+..+|..+++++++++.+..|||++|++.+++.++..+..++.+||.+++.+.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~  187 (382)
T PRK10091        108 FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG  187 (382)
T ss_pred             HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc
Confidence            899999999999999999999994 4788999999999999999989999999999888777666666666664321110


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                         +.                  + ...+.++++..|......++..........+.+.++++.+|+++.+.+++.+...
T Consensus       188 ---~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~  245 (382)
T PRK10091        188 ---GL------------------R-EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVG  245 (382)
T ss_pred             ---CH------------------H-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence               00                  0 1123567777777666555555555555667788888778999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc-hhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM-ANV  412 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  412 (534)
                      ++.+++.++.+++.||+++++.+          ..+..+.++..+.+.....+.+...+..++.+.+.....+... ...
T Consensus       246 ~~~~ig~~~~g~l~~r~~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  315 (382)
T PRK10091        246 LGMVLGNLLSGRLSGRYSPLRIA----------AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLL  315 (382)
T ss_pred             HHHHHHhHHHheeccccCchhHH----------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            99999999999999999987653          3344444444433332221333333333333333332222222 233


Q ss_pred             hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+..|++ ++.+  ..+....+|..+||.+.|.+.|.  .  .+|+..+.+.+++.++.......+..
T Consensus       316 ~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (382)
T PRK10091        316 QNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL--G--LAYNYVALPAALLSFAAMSSLLLYGR  377 (382)
T ss_pred             HhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc--c--cCcchHHHHHHHHHHHHHHHHHHHhh
Confidence            3333333 4444  34677889999999999999986  1  57989998887777666665555443

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=100.00  E-value=7e-35  Score=293.60  Aligned_cols=371  Identities=20%  Similarity=0.266  Sum_probs=279.3

Q ss_pred             HHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCccccCChh
Q psy14136         24 TGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDWDTT  103 (534)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~s~~  103 (534)
                      ++|+..+.++..++...|.+                                                   ++++|+|+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~g~s~~   30 (379)
T TIGR00881         2 IGYAAYYLVRKNFALAMPYL---------------------------------------------------VEEIGLSKT   30 (379)
T ss_pred             chhhHHHHhHHhhhhhhHHH---------------------------------------------------HHHhCCCHh
Confidence            56889999999999999888                                                   558999999


Q ss_pred             hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHH
Q psy14136        104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV  183 (534)
Q Consensus       104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i  183 (534)
                      +.|++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|++.|++.+...+...+++
T Consensus        31 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~  108 (379)
T TIGR00881        31 DLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS--TSLWVMAALWALNGIFQGMGWPPCGRTV  108 (379)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhccccCCchHHHH
Confidence            99999999999999999999999999999999999999999999986655  6899999999999999999999999999


Q ss_pred             hcccCCCcchhhhh-hhhhhhhHHHhhh-hHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhh
Q psy14136        184 GHWIPSNERSRFMS-SFQGFSFGIGLTY-PLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDY  261 (534)
Q Consensus       184 ~~~~~~~~r~~~~~-~~~~~~~G~~~g~-~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~  261 (534)
                      .|++|+++|+++++ ...+..+|..+++ .+++.+.+..+||+.|++.+++.++..++.+++.||+|++++..+.++.+.
T Consensus       109 ~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (379)
T TIGR00881       109 TKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN  188 (379)
T ss_pred             HHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc
Confidence            99999999999999 5578899999999 467777777899999999988888777777777777665432211111100


Q ss_pred             hh-h-ccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHH
Q psy14136        262 IQ-E-NIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLS  339 (534)
Q Consensus       262 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~  339 (534)
                      .+ + ...+++++.+..+...++++++|.++...+..++.......+..+.|.|+++.+|++..+.+.+.+...++.+++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  268 (379)
T TIGR00881       189 EEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVG  268 (379)
T ss_pred             cccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchh
Confidence            00 0 000000111122234567889999999988888888888889999999999888999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhcccccchhhhccCCC
Q psy14136        340 SVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYAGAMANVVDIGPN  418 (534)
Q Consensus       340 ~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  418 (534)
                      .++.+++.||..+++...       ............+...... ..+........+..+.......+.......|..|+
T Consensus       269 ~~~~g~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  341 (379)
T TIGR00881       269 TLLAGWLSDKLFNGRRGP-------LAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPK  341 (379)
T ss_pred             HHHHHHHHHHHcCCcchH-------HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc
Confidence            999999999875443320       1111111112222222221 11222222333333333333333445567788876


Q ss_pred             c-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHH
Q psy14136        419 F-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQV  459 (534)
Q Consensus       419 ~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~  459 (534)
                      + |+++.|+.+....+|+.++|.+.|.+.|.     .||+..
T Consensus       342 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~  378 (379)
T TIGR00881       342 KAAGTAAGFVGFFAYLGGILAGLPLGYLADG-----FGWAGA  378 (379)
T ss_pred             chhHHHHHHHHHhhhhhhhhhhhhHHHHHHh-----hccccc
Confidence            6 99999999999999999999999999998     677654

>PRK12307 putative sialic acid transporter; Provisional

Probab=100.00  E-value=2.1e-34  Score=295.23  Aligned_cols=373  Identities=13%  Similarity=0.115  Sum_probs=266.9

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      +.++..++.++++++...+++...+...|.+                                                 
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-------------------------------------------------   44 (426)
T PRK12307         14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLI-------------------------------------------------   44 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-------------------------------------------------
Confidence            4556667778899999999999999888877                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~  172 (534)
                        ++++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++  ++++.++++|+++|++.
T Consensus        45 --~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~g~  120 (426)
T PRK12307         45 --KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA--SGVIMLTLSRFIVGMGM  120 (426)
T ss_pred             --HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence              55999999999999999999999999999999999999999999999999999886665  68999999999999999


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH  251 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~  251 (534)
                      +...+....++.|++|+++|+++.++ ..+..+|.++++.+.+.+.+.+|||+.|++..+..++ .+   ++....|+++
T Consensus       121 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~---~~~~~~p~~~  196 (426)
T PRK12307        121 AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VI---YIRARAPESK  196 (426)
T ss_pred             hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HH---HHHHHCCCCh
Confidence            99999999999999999999999995 4788999999999999998889999999875433222 21   1111122221


Q ss_pred             cccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHH---HHHHHHHHHHhchhhhhHhhhCCccccchhH
Q psy14136        252 PRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTF---GRIWVHYIFIIPGPRYMKTILGFSIQTNGLL  328 (534)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~  328 (534)
                      +..+ ++.+   +..++.+...+..+..+++++++|.++.......   ......+.+..++|.|+++ .|.++.+.+.+
T Consensus       197 ~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~  271 (426)
T PRK12307        197 EWEE-AKLS---GKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNL  271 (426)
T ss_pred             HHHH-hhhh---ccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence            1100 0000   0000000000111235677888887765443322   2223334467788999987 69998888988


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHH-HHHhhhcccc
Q psy14136        329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVA-VTLITASYAG  407 (534)
Q Consensus       329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  407 (534)
                      .+...++.+++.++.|++.||++||+.+          ..+.++..+.++.................+. ++......+.
T Consensus       272 ~~~~~~~~~~g~~~~g~l~dr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (426)
T PRK12307        272 MTAAAFGTVLGNIVWGLCADRIGLKKTF----------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGL  341 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHH
Confidence            8899999999999999999999988653          3333333333332222221222211111111 1111122233


Q ss_pred             cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136        408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI  462 (534)
Q Consensus       408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~  462 (534)
                      ....+.|..|++ ||+++|+.+....+++.++|.+.|++.+.     .++....++
T Consensus       342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~-----~g~~~~~~~  392 (426)
T PRK12307        342 VPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT-----MGLGAALTF  392 (426)
T ss_pred             HHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc-----ccHHHHHHH
Confidence            445667888876 99999999999999999999999999988     666554333

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=100.00  E-value=5e-34  Score=297.73  Aligned_cols=417  Identities=13%  Similarity=0.094  Sum_probs=279.1

Q ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCC
Q psy14136         11 AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKP   90 (534)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P   90 (534)
                      ..++++.+++++.++.+...+|...++.+.|.+.++..                                          
T Consensus        10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~------------------------------------------   47 (502)
T TIGR00887        10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYY------------------------------------------   47 (502)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Confidence            34456667777888999999999999988876622100                                          


Q ss_pred             CCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy14136         91 NVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV----LHYGALIALRS  166 (534)
Q Consensus        91 ~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~----~~~~~l~~~r~  166 (534)
                          ..+.+.+..+.+++.+.+.++..+++++.|+++||+|||+++.+++++..+++++++++..    .+++.++++|+
T Consensus        48 ----~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~  123 (502)
T TIGR00887        48 ----HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRF  123 (502)
T ss_pred             ----cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHH
Confidence                1134556778899999999999999999999999999999999999999999988766521    12788999999


Q ss_pred             HHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh-----------------------hcCC
Q psy14136        167 IQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA-----------------------HYGW  222 (534)
Q Consensus       167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~-----------------------~~gw  222 (534)
                      ++|++.|...+....+++|++|+++|+++++ ......+|.++++.++..+..                       .++|
T Consensus       124 l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W  203 (502)
T TIGR00887       124 WLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMW  203 (502)
T ss_pred             HHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccH
Confidence            9999999999999999999999999999999 457888999888888765532                       2479


Q ss_pred             chhhhhhchhhHHHHHHhhhhccCCCCCC---cccchhhhhhhhh----ccCccc-------cCCCCCcccHHHhhcC--
Q psy14136        223 RSVFYTTGSLGAIWCVAWWFLAFDAPLKH---PRITRKELDYIQE----NIEPTI-------VGSKGLKVPWVSILTS--  286 (534)
Q Consensus       223 r~~f~i~~~~~li~~i~~~~~~~~~p~~~---~~~~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~~~~--  286 (534)
                      |++|.+.++++++..+ ..+++||+|+..   .+.+++..+...+    ...++.       .+.+..+.++++++++  
T Consensus       204 R~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  282 (502)
T TIGR00887       204 RILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFF  282 (502)
T ss_pred             HHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHh
Confidence            9999887776665444 456779998742   2211111111110    000000       0001112356777653  


Q ss_pred             -HHH----HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh------------HhhhHHHHHHHHHHHHHHHHHH
Q psy14136        287 -PPA----WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL------------LTGAPFLCSYLSSVLFCYLADQ  349 (534)
Q Consensus       287 -~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr  349 (534)
                       ++.    +......++..+.+++...|.|.++++ .|++..+.+.            ......++.+++.++.+++.||
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr  361 (502)
T TIGR00887       283 KWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI  361 (502)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence             222    222233444555667778889999976 6887543221            1233445677788999999999


Q ss_pred             HhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC---CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHH
Q psy14136        350 LFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG---CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILA  425 (534)
Q Consensus       350 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g  425 (534)
                      +|||+.+          .++..+.++++.++....   ..........+...++.....+..+.+..|.+|.+ |+++.|
T Consensus       362 ~gRR~~l----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g  431 (502)
T TIGR00887       362 IGRKPIQ----------LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHG  431 (502)
T ss_pred             hcchhHH----------HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHH
Confidence            9998763          233333333333332211   01111111111122222234455667788999988 999999


Q ss_pred             HHhHHHHhhhhHHhHhhhhcccccccC-----hhhHHHHHHHHHHHHHHHHHHHHhhcCCccccC
Q psy14136        426 FAQTIHMTASFLSPMVAGYFLQDDETS-----LESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPW  485 (534)
Q Consensus       426 ~~~~~~~~g~~i~~~~~g~l~~~~~~~-----~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  485 (534)
                      +.+.+..++++++|.+.+++.+..+..     ..++...|++.+++.+++.+..+++++++.++.
T Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~l  496 (502)
T TIGR00887       432 ISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSL  496 (502)
T ss_pred             HHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCH
Confidence            999999999999999999998851100     034556777777777777666655676655443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK03893 putative sialic acid transporter; Provisional

Probab=100.00  E-value=4.5e-34  Score=298.60  Aligned_cols=388  Identities=14%  Similarity=0.141  Sum_probs=266.2

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      +++|..+..+++++++..+++..++...|.+                                                 
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-------------------------------------------------   46 (496)
T PRK03893         16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEV-------------------------------------------------   46 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence            4566777788999999999999999888887                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~  172 (534)
                        .+++|+|+.+.+++.+.+.+++.++.++.|+++||+|||++++.+.++.+++.++++++  ++++.+++.|++.|++.
T Consensus        47 --~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~  122 (496)
T PRK03893         47 --QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFA--PGYWTLFIARLVIGMGM  122 (496)
T ss_pred             --HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence              45899999999999999999999999999999999999999999999999999886654  68999999999999999


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH  251 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~  251 (534)
                      +...+....++.|++|+++|+++++ ...+..+|..+++.+++.+.+.++||+.|++.++..++ .++.....||.++..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~  201 (496)
T PRK03893        123 AGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAEDWK  201 (496)
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCchhhh
Confidence            9999999999999999999999999 44788999999999999999999999999875433222 222223334432211


Q ss_pred             cccchhh-hhhhhhccCccccCCCCCcccH----------HHhh-------------------------------cCHHH
Q psy14136        252 PRITRKE-LDYIQENIEPTIVGSKGLKVPW----------VSIL-------------------------------TSPPA  289 (534)
Q Consensus       252 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~-------------------------------~~~~~  289 (534)
                      +..++++ .+...+...    ..++.....          ...+                               +.+..
T Consensus       202 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (496)
T PRK03893        202 EKHAGKAPVRTMVDILY----RGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTG  277 (496)
T ss_pred             hhccccccchhHHHHHh----cchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHH
Confidence            1000000 000000000    000000000          0000                               00000


Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136        290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~  369 (534)
                      ....+..+...........++|.|+++.+|++..+.+.+.+...++.+++.++.|++.||+++|+.+          ..+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~----------~~~  347 (496)
T PRK03893        278 VMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY----------VCS  347 (496)
T ss_pred             HHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHH
Confidence            0111111111111123456789999877899999999999999999999999999999999988653          233


Q ss_pred             HHHHHHHHHHHhhcCCch-hHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136        370 QVIPALLVMLIGYLGCNV-ALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ  447 (534)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~  447 (534)
                      ..+..+..+.+....... +......++.++......+....++.+..|++ ||+++|+.+....+|+.++|.+.|.+.|
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~  427 (496)
T PRK03893        348 LLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ  427 (496)
T ss_pred             HHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence            333333322222222122 22222222222222233344556777888865 9999999999999999999999999999


Q ss_pred             ccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        448 DDETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       448 ~~~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      .     .+|...+...+.+..+..+.
T Consensus       428 ~-----~g~~~~~~~~~~~~~~~~~~  448 (496)
T PRK03893        428 R-----LDLGTALASLSFSLTFVVIL  448 (496)
T ss_pred             c-----CChHHHHHHHHHHHHHHHHH
Confidence            8     77887776655544443333

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=100.00  E-value=2e-33  Score=281.48  Aligned_cols=374  Identities=14%  Similarity=0.070  Sum_probs=282.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCC
Q psy14136         16 VVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEE   95 (534)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~   95 (534)
                      +..+.+.++++++.|.....++...+.+.                                                  +
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~--------------------------------------------------~   62 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLN--------------------------------------------------K   62 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------------------------------------------------h
Confidence            45677789999999999999998877762                                                  3


Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhh
Q psy14136         96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA---VLHYGALIALRSIQGIAS  172 (534)
Q Consensus        96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~---~~~~~~l~~~r~l~G~g~  172 (534)
                      .++|+|++|.+++.+++.+++.++.++.|++.||+|+|+++.++.+++++.+++++++.   .++++.+++.|++.|++ 
T Consensus        63 ~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-  141 (462)
T PRK15034         63 IGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-  141 (462)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-
Confidence            38999999999999999999999999999999999999999999999999999876652   25899999999999998 


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh-----h-------------hcCCchhhhhhchhh
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI-----A-------------HYGWRSVFYTTGSLG  233 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~-----~-------------~~gwr~~f~i~~~~~  233 (534)
                      +..++.....+++|+|+++||+++|+. ...++|..+++++...+.     .             ..+||.++++.+++.
T Consensus       142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~  221 (462)
T PRK15034        142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL  221 (462)
T ss_pred             HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence            778999999999999999999999966 456667665555443322     2             234777777887777


Q ss_pred             HHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136        234 AIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY  313 (534)
Q Consensus       234 li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (534)
                      ++..++.+++.++.|+.+                       ......++.+|+|+.|.+++.+++.+..+.++..++|.|
T Consensus       222 iv~~i~~~~~~~~~~~~~-----------------------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~  278 (462)
T PRK15034        222 AIATIAAWSGMNDIASSR-----------------------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAML  278 (462)
T ss_pred             HHHHHHHHHhCCCccccc-----------------------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            777777676655433211                       112245678999999999999999999999999999999


Q ss_pred             hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHH-HhhcC----Cchh
Q psy14136        314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVML-IGYLG----CNVA  388 (534)
Q Consensus       314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~  388 (534)
                      +++.+  +.........+..+...+.++++|+++||+|+++.+          .++++...+.... +...+    .+.+
T Consensus       279 ~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl----------~~~~i~~~i~~~~~~l~lp~~~~~~~~  346 (462)
T PRK15034        279 AKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT----------LINFIFMAIFSALLFLTLPGTGSGNFI  346 (462)
T ss_pred             HHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH----------HHHHHHHHHHHHHHHHHhccccccHHH
Confidence            98754  333333334455678899999999999999998764          2333222222211 11111    1234


Q ss_pred             HHHHHHHHHHHHhhhcccccchhhhccCCC----------------------chhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136        389 LVLITWFVAVTLITASYAGAMANVVDIGPN----------------------FAGPILAFAQTIHMTASFLSPMVAGYFL  446 (534)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----------------------~~g~~~g~~~~~~~~g~~i~~~~~g~l~  446 (534)
                      .....++..++..|..+...+-.+..++|+                      +.|.+.|+...++.+|+++-|.+.|...
T Consensus       347 ~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~  426 (462)
T PRK15034        347 AFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSL  426 (462)
T ss_pred             HHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHH
Confidence            444444445566666666777666666663                      5789999999999999999999999988


Q ss_pred             cccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        447 QDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      +.  +  +++...|+...+..++++++.+....
T Consensus       427 ~~--~--g~~~~~~~~~~~~~~~~~~~~w~~y~  455 (462)
T PRK15034        427 NM--T--GSPVGAMKVFLIFYIVCVLLTWLVYG  455 (462)
T ss_pred             HH--c--CCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence            77  3  56888899988888887777665543

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=100.00  E-value=9.5e-33  Score=280.40  Aligned_cols=343  Identities=16%  Similarity=0.102  Sum_probs=252.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-H-----HHHHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-V-----LHYGALIALRSIQ  168 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-~-----~~~~~l~~~r~l~  168 (534)
                      ++++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++++++.++. .     .+++.+++.|+++
T Consensus        43 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  122 (399)
T PRK05122         43 HDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLL  122 (399)
T ss_pred             HHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Confidence            448999999999999999999999999999999999999999999999888877654432 1     2567899999999


Q ss_pred             hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      |++.+...+...+++.|++|+++|+++++++ .+..+|.++|+++++.+.+.+|||..+++.+++.++..+.    .++.
T Consensus       123 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~----~~~~  198 (399)
T PRK05122        123 GIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL----ARPR  198 (399)
T ss_pred             HhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH----HhcC
Confidence            9999999999999999999999999999955 6788899999999999999999999988766554432222    1222


Q ss_pred             CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136        248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL  327 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~  327 (534)
                      |+.++.  +++                  +.++++.++  +.+.......+..........+.|.|+.+ .|.  .+.+.
T Consensus       199 ~~~~~~--~~~------------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~  253 (399)
T PRK05122        199 PAVPPV--KGE------------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAAL  253 (399)
T ss_pred             CCCCCC--Ccc------------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchH
Confidence            221110  000                  011222332  22222222333444555666778888876 465  34566


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136        328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG  407 (534)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (534)
                      ......++.+++.++.|++.||+++|+.+          ..+..+.++....+...+ +.+...+..++.+++.+...+.
T Consensus       254 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~  322 (399)
T PRK05122        254 ALTLFGVAFVGARLLFGNLINRLGGLRVA----------IVSLLVEILGLLLLWLAP-SPWMALIGAALTGFGFSLVFPA  322 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhHHHHHHH
Confidence            67778888999999999999999987643          344444444444444444 4555555556666666666666


Q ss_pred             cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      ......+..|++ ||++.|+.+....+|..++|.+.|.+.+.     .+|+..|++.+++.+++.+....++++++
T Consensus       323 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (399)
T PRK05122        323 LGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----FGYPSIFLAAALAALLGLALTWLLYRRAP  393 (399)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            556666767755 99999999999999999999999999998     78999999988888887777666655443

>PRK15075 citrate-proton symporter; Provisional

Probab=100.00  E-value=3.5e-33  Score=286.27  Aligned_cols=353  Identities=13%  Similarity=0.101  Sum_probs=243.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCC
Q psy14136         15 RVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNE   94 (534)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~   94 (534)
                      |++....++++.++.++|+..++.+.|.+                                                   
T Consensus        13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i---------------------------------------------------   41 (434)
T PRK15075         13 KARAILRVTSGNFLEMFDFFLFGFYATAI---------------------------------------------------   41 (434)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------
Confidence            34456678999999999999999999988                                                   


Q ss_pred             CccccCChhhHHHHH-HHH-----HHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH--------H
Q psy14136         95 EGEFDWDTTTQGAIL-SSF-----YWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG--------A  160 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~-s~~-----~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~--------~  160 (534)
                      ++|++.++.+.+.+. +..     .++..+++++.|+++||+|||++++.+.+++++++++++++  ++++        .
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~  119 (434)
T PRK15075         42 AKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFV--PGYATIGLAAPLL  119 (434)
T ss_pred             HHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhC--CcHHHHHHHHHHH
Confidence            448888777765443 322     23334788999999999999999999999999999997766  4655        4


Q ss_pred             HHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhch
Q psy14136        161 LIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGS  231 (534)
Q Consensus       161 l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~  231 (534)
                      ++++|+++|++.+...+....+++|++|+++|++++++. .+.++|..+++.+++.+.        +.+|||++|++..+
T Consensus       120 l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~  199 (434)
T PRK15075        120 VLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL  199 (434)
T ss_pred             HHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence            689999999999999999999999999999999999955 567777777777766653        46899999987543


Q ss_pred             hhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHH-HHHHHHHHHHHHHHHhch
Q psy14136        232 LGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAI-GITTFGRIWVHYIFIIPG  310 (534)
Q Consensus       232 ~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  310 (534)
                      .. +   ..+ +.++.+++.+.   ...+.  +        +.+.+..++...++++.+.. .+..++.....+.+..|.
T Consensus       200 ~~-~---~~~-~~~~~~~e~~~---~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (434)
T PRK15075        200 IV-P---FIF-LIRRSLEETEE---FLARK--H--------RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYT  261 (434)
T ss_pred             HH-H---HHH-HHHHhcCCCHH---HHHhh--h--------ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22 1   111 22222211110   00000  0        01111224444556555543 333444556677788999


Q ss_pred             hhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH-HHHH--HhhcCCch
Q psy14136        311 PRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL-LVML--IGYLGCNV  387 (534)
Q Consensus       311 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~  387 (534)
                      |.|+++.+|++..+.+++..+..++.+++.++.|+++||++||+.+          ..+..+..+ .+..  ......+.
T Consensus       262 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  331 (434)
T PRK15075        262 PTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVL----------IAFTVLAILTAYPALSWLVAAPSF  331 (434)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHHHcCCch
Confidence            9999988899988888888888899999999999999999998753          121111111 1111  11112122


Q ss_pred             hHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccc
Q psy14136        388 ALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQD  448 (534)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~  448 (534)
                      ........+.+++.+...+.......|..|++ |+++.|+.+..... ++.++|.+.|.+.|.
T Consensus       332 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~  394 (434)
T PRK15075        332 ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV  394 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence            22222233334445555555567778888876 99999997665554 588899999999998

>PRK10504 putative transporter; Provisional

Probab=100.00  E-value=4.3e-33  Score=289.13  Aligned_cols=365  Identities=15%  Similarity=0.149  Sum_probs=277.6

Q ss_pred             HHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCcccc
Q psy14136         20 MMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFD   99 (534)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~   99 (534)
                      ..+++++++...+...++..+|.+                                                   .+++|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~p~~---------------------------------------------------~~~~g   41 (471)
T PRK10504         13 WIVAFGFFMQSLDTTIVNTALPSM---------------------------------------------------AQSLG   41 (471)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHH---------------------------------------------------HHHhC
Confidence            335677888888988888888877                                                   44899


Q ss_pred             CChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhH
Q psy14136        100 WDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAM  179 (534)
Q Consensus       100 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~  179 (534)
                      .++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++  ++++.+++.|+++|++.+...+..
T Consensus        42 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~~~~~~~~  119 (471)
T PRK10504         42 ESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS--GTLNELLLARVLQGVGGAMMVPVG  119 (471)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHhhhHHHHHHH
Confidence            999999999999999999999999999999999999999999999988886554  689999999999999999999999


Q ss_pred             HHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhh
Q psy14136        180 YALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKE  258 (534)
Q Consensus       180 ~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~  258 (534)
                      .+++.|++|+++|+++.++ ....++|..+++.+++.+.++.|||+.|++..++..+..++.....|+.+....+.+...
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~  199 (471)
T PRK10504        120 RLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSG  199 (471)
T ss_pred             HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHH
Confidence            9999999999999999994 478889999999999999999999999999887777766666666555443322221110


Q ss_pred             hhh-----------hhhccC-----------------------ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHH
Q psy14136        259 LDY-----------IQENIE-----------------------PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHY  304 (534)
Q Consensus       259 ~~~-----------~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (534)
                      ...           ..+...                       .++...+++..+ .+++|+|.++...+..++......
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~  278 (471)
T PRK10504        200 FLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSG  278 (471)
T ss_pred             HHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccC-HHHhcccchHHHHHHHHHHHHHHH
Confidence            000           000000                       000011111222 358899999888888888877777


Q ss_pred             HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG  384 (534)
Q Consensus       305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (534)
                      ....+.|.|++...|.++.+.++......++.+++.++.+++.||+++|+.+          ..+..+.++...++....
T Consensus       279 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~  348 (471)
T PRK10504        279 MLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL----------VATTLGLALVSLLFMLVA  348 (471)
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHHHHHhcc
Confidence            7778889999887899999999999888888999999999999999988753          344444444333333322


Q ss_pred             --CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        385 --CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       385 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                        ...+......++.+.+.+...+.......+..|++ ++.++|+.++...+|..+|+.+.|.+.+.
T Consensus       349 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~  415 (471)
T PRK10504        349 LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL  415 (471)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              12222233344444556666666667777777765 99999999999999999999999998876

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=100.00  E-value=1e-32  Score=280.27  Aligned_cols=330  Identities=10%  Similarity=0.018  Sum_probs=245.8

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|.+..+.++..+++.++++++++++|+++||+|||++++.+.+++++++++++++  ++++.++++|+++|++.+.
T Consensus        43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~Gi~~~~  120 (413)
T PRK15403         43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT--TSMTQFLIARFIQGTSICF  120 (413)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH
Confidence            55999999999999999999999999999999999999999999999999999987655  6999999999999999987


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+....++.|++|+++|+++++ ...+..+|..+||.+++.+.+++|||+.|++.+++.++..+..++.+||+++++++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~  200 (413)
T PRK15403        121 IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV  200 (413)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC
Confidence            77888899999999999999999 55788999999999999999889999999999888887766656666765432111


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                      ..  +.              +....++++++|||.+|...+...+.......+..+.|.++++.+|.++.+.++......
T Consensus       201 ~~--~~--------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~  264 (413)
T PRK15403        201 PF--SA--------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVF  264 (413)
T ss_pred             CC--Ch--------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHH
Confidence            00  00              011235678899999999888888888888888888999999988999999999887777


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                      .+.+++..+.+++.+|..+++....   ......++.++..+...   ......+..+...++.+.+.+...+.......
T Consensus       265 ~~~~i~~~l~~~~~~~~~~~~~~~~---~~~~~~ig~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al  338 (413)
T PRK15403        265 GAVIVANAIVARFVKDPTEPRFIWR---AVPIQLVGLALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL  338 (413)
T ss_pred             HHHHHHHHHHHHHhccCCchhHHHH---HHHHHHHHHHHHHHHHH---HccccHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            8888877777776544333332100   00011122111111111   12213322344555556666666555553332


Q ss_pred             ccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        414 DIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       414 ~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ...+..+|++.++.+.....+..+++...+++.+.
T Consensus       339 ~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~  373 (413)
T PRK15403        339 FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN  373 (413)
T ss_pred             ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            22223389999999999999999999999988766

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=100.00  E-value=1.1e-33  Score=294.38  Aligned_cols=404  Identities=16%  Similarity=0.130  Sum_probs=265.7

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      ..+....+++.++.+...+|...++...+.+.++.                                        ..   
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~---   44 (479)
T PRK10077          8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVF----------------------------------------VA---   44 (479)
T ss_pred             hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHh----------------------------------------cc---
Confidence            34455555567788888999999988877764321                                        00   


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH----------HHHHHHHH
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA----------VLHYGALI  162 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~----------~~~~~~l~  162 (534)
                      +...++++++.+.+++.+++.++.+++++++|+++||+|||++++++.++++++.++++++.          .+.++.++
T Consensus        45 ~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  124 (479)
T PRK10077         45 PQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV  124 (479)
T ss_pred             cccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence            11457799999999999999999999999999999999999999999999999888765531          12367789


Q ss_pred             HHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhchhh
Q psy14136        163 ALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGSLG  233 (534)
Q Consensus       163 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~~~  233 (534)
                      ++|+++|++.|...+...++++|++|+++|++++++. .+..+|.++++.++..+.        +.+|||++|++.+++.
T Consensus       125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~  204 (479)
T PRK10077        125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPA  204 (479)
T ss_pred             HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHH
Confidence            9999999999999999999999999999999999955 678888888877765543        3579999999988777


Q ss_pred             HHHHHHhhhhccCCCCCCccc-chhhhhhhhhccCccccCCCCCcccHHHhhc-----CHHHH------H---HHHHHHH
Q psy14136        234 AIWCVAWWFLAFDAPLKHPRI-TRKELDYIQENIEPTIVGSKGLKVPWVSILT-----SPPAW------A---IGITTFG  298 (534)
Q Consensus       234 li~~i~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~---~~~~~~~  298 (534)
                      ++..+. .+++||+|+..... +.++.+...+........ +......++.++     .+..+      .   .....+.
T Consensus       205 ~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (479)
T PRK10077        205 LLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLA-TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQ  282 (479)
T ss_pred             HHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhH-HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHH
Confidence            776544 55678877531111 111111100000000000 000000011110     00100      0   0111111


Q ss_pred             HHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH
Q psy14136        299 RIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVM  378 (534)
Q Consensus       299 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  378 (534)
                      .....+....+.|.+.++ .|.+.....+.....++..+++.++.+++.||++||+.+          ..+.++.+++.+
T Consensus       283 ~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~----------i~~~~~~~v~~~  351 (479)
T PRK10077        283 QFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMF  351 (479)
T ss_pred             HHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH----------HHhHHHHHHHHH
Confidence            122233444566777665 788877777777778889999999999999999988753          344444444433


Q ss_pred             HHhhc---CCchhHHHHHHHHHHHHhhh-cccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc------c
Q psy14136        379 LIGYL---GCNVALVLITWFVAVTLITA-SYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL------Q  447 (534)
Q Consensus       379 ~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~------~  447 (534)
                      .+...   ...........++.+++.+. ..+....++.|.+|++ |+++.|+.+...+++..+++.+.+.+.      +
T Consensus       352 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~  431 (479)
T PRK10077        352 SLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVA  431 (479)
T ss_pred             HHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhh
Confidence            33221   11112222233333333332 3356678889998866 999999999999999999877776544      3


Q ss_pred             ccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        448 DDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .     .++...|++.+++.++++++.+++
T Consensus       432 ~-----~~~~~~~~~~~~~~~~~~~~~~~~  456 (479)
T PRK10077        432 H-----FHNGFSYWIYGCMGVLAALFMWKF  456 (479)
T ss_pred             h-----ccCccHHHHHHHHHHHHHHHHHhc
Confidence            4     566677777777666665554443

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=100.00  E-value=1.8e-32  Score=277.07  Aligned_cols=325  Identities=17%  Similarity=0.224  Sum_probs=254.5

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|.|+.+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|++.|++.+.
T Consensus        32 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~  109 (385)
T TIGR00710        32 AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS--NNIETLLVLRFVQAFGASA  109 (385)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHcchhH
Confidence            55899999999999999999999999999999999999999999999999999886554  6899999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|+++++ ......+|..+++.+++.+.++.+||+.|++.+++.++..+..++..||+++++++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (385)
T TIGR00710       110 GSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEAR  189 (385)
T ss_pred             HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            99999999999999999999999 55788999999999999999999999999998888877777666666665433221


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                      .+.                 ++....+++++++|+++...+..............+.|.++++.+|.++.+.+.+.....
T Consensus       190 ~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~  252 (385)
T TIGR00710       190 IQI-----------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNI  252 (385)
T ss_pred             CCH-----------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHH
Confidence            100                 011124567888999888877777777777788888999998889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc---C-CchhHHHHHHHHHHHHhhhcccccc
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL---G-CNVALVLITWFVAVTLITASYAGAM  409 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~  409 (534)
                      ++.+++.++.+++.||+++|+.+          ..+..+..+....+...   . ...........+.+++.+...+...
T Consensus       253 ~~~~~~~~~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  322 (385)
T TIGR00710       253 IAMIFGGFLNGRFIKKWGAKSLL----------RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAM  322 (385)
T ss_pred             HHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999988653          22222222222222211   1 1222333344455566666667777


Q ss_pred             hhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        410 ANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       410 ~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ....|..|++++++.++.+.....++.+.+.+.+.+.+.
T Consensus       323 ~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~  361 (385)
T TIGR00710       323 AYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN  361 (385)
T ss_pred             HHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            777787787799999999999887666666666644443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00899 2A0120 sugar efflux transporter

Probab=100.00  E-value=6.6e-33  Score=279.16  Aligned_cols=353  Identities=16%  Similarity=0.159  Sum_probs=268.3

Q ss_pred             cCCCCCCC--CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         87 LEKPNVNE--EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGF-SQLVTAICSLLIPQAAVLHYGALIA  163 (534)
Q Consensus        87 ~~~P~~~~--~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~i~~~l~~~a~~~~~~~l~~  163 (534)
                      ...|.++.  ++++|.|+.++|++.+++.++..+.+++.|+++||+||||.++. +.++.+++.++++++  ++++.+++
T Consensus        15 ~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~   92 (375)
T TIGR00899        15 LQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN--RNYFLLLV   92 (375)
T ss_pred             HHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc--chHHHHHH
Confidence            34555554  77999999999999999999999999999999999999987655 555556666665444  68999999


Q ss_pred             HHHHHhhhhcchhhhHHHHHhcccCCCcchhh--hh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHh
Q psy14136        164 LRSIQGIASGLTWPAMYALVGHWIPSNERSRF--MS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAW  240 (534)
Q Consensus       164 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~--~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~  240 (534)
                      .|++.|.+.+...|...+++.|+.|+++|++.  .+ ...+.++|.++++++++.+.+.+|||+.|++.+++.++..+..
T Consensus        93 ~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~  172 (375)
T TIGR00899        93 LGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLV  172 (375)
T ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            99999988888899999999999988777754  45 4467889999999999999999999999999988877777777


Q ss_pred             hhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCC
Q psy14136        241 WFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGF  320 (534)
Q Consensus       241 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~  320 (534)
                      ++++||.|++++..+                    ...+.++.+++|+++......++..........+.|.|+++.+|.
T Consensus       173 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  232 (375)
T TIGR00899       173 WLFLPSYPRGAPGAL--------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGL  232 (375)
T ss_pred             HHhCCCcccCccccc--------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCC
Confidence            766777654321100                    011233456677776665555555555555667789999888899


Q ss_pred             ccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q psy14136        321 SIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTL  400 (534)
Q Consensus       321 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (534)
                      ++.+.+.+.....+..+++.++.|++.||+++|+.+          .++.++..+.+......+ +.+......++.+++
T Consensus       233 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~  301 (375)
T TIGR00899       233 PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM----------LLAALAGVAFYTGLAADN-SLWALLMLQLLNAIF  301 (375)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence            999999888777778888999999999999988753          223333333333333333 444444444555566


Q ss_pred             hhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        401 ITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       401 ~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .+...+....+..|..|++++++.++.+...++|..++|.+.|.+.+.     .+|+..|++.+++.+++.++..++
T Consensus       302 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~  373 (375)
T TIGR00899       302 IGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAER-----WSYHAVYWFAIVMLIVALFCLLLI  373 (375)
T ss_pred             HHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhHHHHHHHHHHHHHHHHhee
Confidence            666666667778888898888999999999999999999999999998     789999999888888777766554

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>KOG2533|consensus

Probab=100.00  E-value=1.1e-32  Score=278.64  Aligned_cols=355  Identities=20%  Similarity=0.247  Sum_probs=264.9

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++|.+....+.+++.++++++++++.+++|.+.||++..+.+....+++++..++...  .+|++.+++.|++.|+.++.
T Consensus        73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~--~~s~~~~ialr~llGl~es~  150 (495)
T KOG2533|consen   73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA--VHSFPGLIALRFLLGLFESG  150 (495)
T ss_pred             ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHhcc
Confidence            5688999999999999999999999999999999999999999999988888877544  36999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhh------hhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLI------AHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~------~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      .+|....+++.|+.++||++.++ +++..++|.++|++++..+.      ...||||.|.+.++++++..+++++++|+.
T Consensus       151 ~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~  230 (495)
T KOG2533|consen  151 GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN  230 (495)
T ss_pred             cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence            99999999999999999999999 55889999999999998864      347899999999999999999999999999


Q ss_pred             CCCCcccchhhhhhhhhccCccc---cCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc
Q psy14136        248 PLKHPRITRKELDYIQENIEPTI---VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT  324 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~  324 (534)
                      |++..-.+++|++...++.++..   ..++.++..+++.+++|.+|...+..++.....+++.+|+|.|+.+..|++..+
T Consensus       231 P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~  310 (495)
T KOG2533|consen  231 PSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ  310 (495)
T ss_pred             hhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH
Confidence            99776666666433222222111   111245567889999999999999999999999999999999999966799999


Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      +..+..+..++++++.+++|+++||++.-..+     |..+.....+...++...+.... .........+.+..+....
T Consensus       311 a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~-----~~~~~~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~~~~~~~~~  384 (495)
T KOG2533|consen  311 ANLLSTPYDVGGIVGLILAGYLSDRLKTIFAR-----RLLFIVFLCLYAIIGAISLLAAA-VLPGAYGAFLIGPYGLIAT  384 (495)
T ss_pred             hccccchHHhhhHHHHHHHHHHHHHHhhhHHH-----HHHHHHHHHHHHHHHHHHHHhhc-cchHHhHHHHhcchhhHHH
Confidence            99999999999999999999999996410000     11122222223333323333332 2333333344444444454


Q ss_pred             ccccchhhhccCC-Cc-hhHHHHHHhHHHHhhhhHHhHhh-hhcccccccChhhHHHHHHH
Q psy14136        405 YAGAMANVVDIGP-NF-AGPILAFAQTIHMTASFLSPMVA-GYFLQDDETSLESWRQVFLI  462 (534)
Q Consensus       405 ~~~~~~~~~~~~p-~~-~g~~~g~~~~~~~~g~~i~~~~~-g~l~~~~~~~~~~~~~~f~~  462 (534)
                      .+......++... .. +-+..+........++.++|.+. +.....     ..|...|..
T Consensus       385 ~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~-----y~~~~~f~~  440 (495)
T KOG2533|consen  385 AIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR-----YGWGAVFYM  440 (495)
T ss_pred             HHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc-----hhhhhHHHH
Confidence            5555555655443 33 44555555555555555555543 222222     567777733

>PRK10489 enterobactin exporter EntS; Provisional

Probab=100.00  E-value=4.3e-33  Score=284.44  Aligned_cols=354  Identities=16%  Similarity=0.049  Sum_probs=265.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhhc
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ---AAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~---a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      +++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+.   ...++++.+++.|++.|++.+
T Consensus        46 ~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~  125 (417)
T PRK10489         46 MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGS  125 (417)
T ss_pred             HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence            67779999999999999999999999999999999999999998888887665432   123578889999999999999


Q ss_pred             chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      ...+...+++.|++|+++|+++.++. ...++|..+|+.+++.+.+..+|++.|++.++..++..++. +.+|+.+++++
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~  204 (417)
T PRK10489        126 LGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPALPPPPQ  204 (417)
T ss_pred             HHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCCCCCCCc
Confidence            88899999999999999999999954 78899999999999999998899999998877766655443 34455432211


Q ss_pred             ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136        253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP  332 (534)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~  332 (534)
                      .. +++.              ++.+..++.++++|.++...+..++... ......+.|.|+++.+|.++...+++.+..
T Consensus       205 ~~-~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~  268 (417)
T PRK10489        205 PR-EHPL--------------RSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAV  268 (417)
T ss_pred             cc-ccch--------------HHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHH
Confidence            00 0000              1111235567788887666555444332 356677899999988899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      .++.+++.++.+++.||.++++.          ...+.++..+.+..+...+ +.+...+..++.+++.+...+......
T Consensus       269 ~~g~~ig~~~~~~l~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~  337 (417)
T PRK10489        269 PLGAALGALTSGWLAHSARPGLL----------MLLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISSLLQYTLL  337 (417)
T ss_pred             HHHHHHHHHHHHHhhhccCcchH----------HHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998655443          2344444445555444443 444445555555665665556666788


Q ss_pred             hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHH-HHHhhcCCccc
Q psy14136        413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYF-FYQVLGTSEVQ  483 (534)
Q Consensus       413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~  483 (534)
                      .+..|++ ||+++|+.+...++|..++|.+.|.+.+.     .++...++..+++.++..+ .....++.+++
T Consensus       338 ~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (417)
T PRK10489        338 QTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM-----MTPVASASASGFGLLIIGVLLLLVLGELRRF  405 (417)
T ss_pred             HhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH-----hchhhHHHHHHHHHHHHHHHHHHhccccccc
Confidence            8888876 99999999999999999999999999998     7777777776665554444 44444544443

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=100.00  E-value=3.2e-33  Score=291.48  Aligned_cols=368  Identities=17%  Similarity=0.179  Sum_probs=288.4

Q ss_pred             HHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCcc
Q psy14136         18 LYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGE   97 (534)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~   97 (534)
                      .+..++++.++..+|...++.+.|.+                                                   .++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~p~~---------------------------------------------------~~~   31 (485)
T TIGR00711         3 LTIVLMLGTFMAVLDSTIVNVAIPTI---------------------------------------------------AGD   31 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------------HHh
Confidence            44556788999999999999999888                                                   558


Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhh
Q psy14136         98 FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWP  177 (534)
Q Consensus        98 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~  177 (534)
                      +|.++.+.+|+.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++  ++++.++++|+++|++.+...+
T Consensus        32 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~G~~~~~~~~  109 (485)
T TIGR00711        32 LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA--PNLELMIIFRVIQGFGGGPLIP  109 (485)
T ss_pred             cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc--CCHHHHHHHHHHHHhhhhhHHH
Confidence            99999999999999999999999999999999999999999999999999997655  6899999999999999999999


Q ss_pred             hHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccch
Q psy14136        178 AMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITR  256 (534)
Q Consensus       178 ~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~  256 (534)
                      ...+++.|++|+++|+++++++ .+..+|..+++.+++++.+++|||+.|++.++++++..++.++..|++++......+
T Consensus       110 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  189 (485)
T TIGR00711       110 LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFD  189 (485)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCc
Confidence            9999999999999999999955 788999999999999999999999999999888887777766666664332211110


Q ss_pred             hhhh------------hhhhccCcc-----------------------ccCCCCCcccHHHhhcCHHHHHHHHHHHHHHH
Q psy14136        257 KELD------------YIQENIEPT-----------------------IVGSKGLKVPWVSILTSPPAWAIGITTFGRIW  301 (534)
Q Consensus       257 ~~~~------------~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (534)
                      ....            ...+.....                       ++..++.+....+++++|.++...+..++..+
T Consensus       190 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (485)
T TIGR00711       190 FLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGL  269 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHH
Confidence            0000            000000000                       00011112223467888998888888888888


Q ss_pred             HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136        302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG  381 (534)
Q Consensus       302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  381 (534)
                      ..+....++|.|+++.+|+++.++++...+..++.+++.++.|++.||+++|+.+          .++..+.+++...+.
T Consensus       270 ~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~g~~~~~~~~~~~~  339 (485)
T TIGR00711       270 GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV----------TIGLILYAVGFYWRA  339 (485)
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH----------HHHHHHHHHHHHHHh
Confidence            8888889999999998999999999999999999999999999999999987652          444555555444444


Q ss_pred             h--c-CCchhHHHHHHHHHHHHhhhcccccchhhhccCCC-chhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        382 Y--L-GCNVALVLITWFVAVTLITASYAGAMANVVDIGPN-FAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       382 ~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      +  . ..+.+......++.+++.+...+.......+..|+ ++|++.|+.+....+|+.+|+.+.+.+.+.
T Consensus       340 ~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~  410 (485)
T TIGR00711       340 FTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN  410 (485)
T ss_pred             ccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1  1 12334444555666666666665555555565664 499999999999999999999999998876

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00897 2A0118 polyol permease family

Probab=100.00  E-value=7.4e-32  Score=273.69  Aligned_cols=356  Identities=16%  Similarity=0.158  Sum_probs=262.6

Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHhhhhc
Q psy14136         96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ-AA-VLHYGALIALRSIQGIASG  173 (534)
Q Consensus        96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-a~-~~~~~~l~~~r~l~G~g~g  173 (534)
                      +|+|+|+.+.|++.+.+.+++.+++++.|+++||+||||++..+.++.+++.+++.+ .. .++++.+++.|++.|++.+
T Consensus        41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~  120 (402)
T TIGR00897        41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP  120 (402)
T ss_pred             HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence            378999999999999999999999999999999999999999999999998766432 12 2478888999999999998


Q ss_pred             chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHH-HhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGI-GLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH  251 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~-~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~  251 (534)
                      ...+...+.+.+++|+++|++++|+. .+.++|. ++++.+++.+.+.+||+..+|......++..++.+++.++.++++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (402)
T TIGR00897       121 LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ  200 (402)
T ss_pred             HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Confidence            88888889999999999999999954 7788886 588999999988889776666554444443444444445432211


Q ss_pred             cccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhh
Q psy14136        252 PRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGA  331 (534)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~  331 (534)
                      +.. +++             +.++.+..+++++++|.++...+..++.....+++.++.|.|+++ +|++..+.+.+...
T Consensus       201 ~~~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~  265 (402)
T TIGR00897       201 HMQ-TRE-------------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGT  265 (402)
T ss_pred             ccc-CCc-------------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHH
Confidence            110 000             001112245678999999988888888888888889999999876 89999998888888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHHHHhhhcccccch
Q psy14136        332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY-LGCNVALVLITWFVAVTLITASYAGAMA  410 (534)
Q Consensus       332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (534)
                      ..++.+++.+..|++.||+++|+.+.      ....+...+..+.+..... ...+.+...+..++.+++.+...+ ...
T Consensus       266 ~~~~~~ig~~~~g~l~dr~~~~~~~~------~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~  338 (402)
T TIGR00897       266 FFFTNIVFNVIFGIVGDKLGWMNTVR------WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAA  338 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchhHHH------HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHH
Confidence            89999999999999999999876530      0011111111111111111 122333444444444444444333 334


Q ss_pred             hhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        411 NVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       411 ~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      ...+..|++||++.|+.+....+++.++|.+.|.+.+.     .|+...+++.+++.+++.++..+++
T Consensus       339 ~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-----~g~~~~~~~~a~~~~i~~~~~~~~~  401 (402)
T TIGR00897       339 VFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-----FGAIGVVWIFAALYVVSAFLTAFIR  401 (402)
T ss_pred             HHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cchHHHHHHHHHHHHHHHHHHHHhc
Confidence            55677788899999999999999999999999999998     7899999999888877777665543

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK10133 L-fucose transporter; Provisional

Probab=100.00  E-value=3.3e-32  Score=277.98  Aligned_cols=381  Identities=12%  Similarity=0.109  Sum_probs=282.4

Q ss_pred             CcCCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccc
Q psy14136          7 RFTDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTML   86 (534)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (534)
                      |.....+.....+..+++.+++..+++...+...|.+                                           
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i-------------------------------------------   52 (438)
T PRK10133         16 KDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQF-------------------------------------------   52 (438)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------
Confidence            3443444455666667788888899999999888887                                           


Q ss_pred             cCCCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy14136         87 LEKPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ-AAVLHYGALIALR  165 (534)
Q Consensus        87 ~~~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-a~~~~~~~l~~~r  165 (534)
                              ++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..++++++++.+++.. +.+++++.++++|
T Consensus        53 --------~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r  124 (438)
T PRK10133         53 --------QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGL  124 (438)
T ss_pred             --------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence                    6699999999999999999999999999999999999999999999999999987532 2357899999999


Q ss_pred             HHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh-----------------h--------
Q psy14136        166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA-----------------H--------  219 (534)
Q Consensus       166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~-----------------~--------  219 (534)
                      +++|+|.|...+...+++.|+.|+++|.+.++ .+....+|..+++.+++.+..                 .        
T Consensus       125 ~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~  204 (438)
T PRK10133        125 FIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSL  204 (438)
T ss_pred             HHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHH
Confidence            99999999999999999999887777777788 557888999999988765430                 0        


Q ss_pred             -cCCchhhhhhchhhH-HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHH
Q psy14136        220 -YGWRSVFYTTGSLGA-IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTF  297 (534)
Q Consensus       220 -~gwr~~f~i~~~~~l-i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (534)
                       .+||++|+....+.. +..++.+...||.+++++    ++.            +..+....+++++++|.++...+..+
T Consensus       205 ~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~----~~~------------~~~~~~~~~~~ll~~~~~~~~~l~~~  268 (438)
T PRK10133        205 VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH----SDA------------KQGSFSASLSRLARIRHWRWAVLAQF  268 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc----ccc------------cccchhhhHHHHHhCchHHHHHHHHH
Confidence             256667764333322 322222222232211100    000            00111234567889999888777777


Q ss_pred             HHHHHHHHHHhchhhhh-HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q psy14136        298 GRIWVHYIFIIPGPRYM-KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL  376 (534)
Q Consensus       298 ~~~~~~~~~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~  376 (534)
                      +..........|.+.|+ ++.+|+++.++++......++.++++++.+++.||+++|+.+          ..+..+..+.
T Consensus       269 ~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l----------~~~~~~~~~~  338 (438)
T PRK10133        269 CYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMAL  338 (438)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHH
Confidence            77778887888889885 566899999999999999999999999999999999998763          2333333333


Q ss_pred             HHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-
Q psy14136        377 VMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-  455 (534)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-  455 (534)
                      +++..+.+ +. .....+.+.+++.+..+|...+...+..|++.+.+.++..+ ..+|+.++|.+.|.+.|.     .| 
T Consensus       339 ~~~~~~~~-~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~-----~g~  410 (438)
T PRK10133        339 CLISAFAG-GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA-----AGN  410 (438)
T ss_pred             HHHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHh-----ccc
Confidence            33333333 22 33455667788889999999999999888878888888864 557889999999999888     55 


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy14136        456 WRQVFLIAGAVGSCTYF  472 (534)
Q Consensus       456 ~~~~f~~~~~~~~~~~~  472 (534)
                      .+..|++..++.+..+.
T Consensus       411 ~~~~~~v~~~~~~~~~~  427 (438)
T PRK10133        411 IPTAELIPALCFAVIFI  427 (438)
T ss_pred             hHHHHHHHHHHHHHHHH
Confidence            67777765555444333

>TIGR00898 2A0119 cation transport protein

Probab=100.00  E-value=1.2e-31  Score=280.95  Aligned_cols=369  Identities=17%  Similarity=0.193  Sum_probs=264.6

Q ss_pred             CCCCC-CccccCC---hhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         90 PNVNE-EGEFDWD---TTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALR  165 (534)
Q Consensus        90 P~~~~-~~~~~~s---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r  165 (534)
                      +..+. .+|+|++   +.+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++++++  ++++.++++|
T Consensus       110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r  187 (505)
T TIGR00898       110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS--PNYTVFLVFR  187 (505)
T ss_pred             cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc--ccHHHHHHHH
Confidence            44454 8899999   9999999999999999999999999999999999999999999999886655  6999999999


Q ss_pred             HHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136        166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA  244 (534)
Q Consensus       166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~  244 (534)
                      ++.|++.+...+...+++.|++|+++|+++.++. .+..+|.++++.++..+.+   ||+.|++.+++.++..+.. +++
T Consensus       188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~  263 (505)
T TIGR00898       188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV  263 (505)
T ss_pred             HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence            9999999999999999999999999999999954 6788999999888766543   9999999988877766655 567


Q ss_pred             cCCCCCCccc--chhhhhhhh---hc----c-------C-ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q psy14136        245 FDAPLKHPRI--TRKELDYIQ---EN----I-------E-PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI  307 (534)
Q Consensus       245 ~~~p~~~~~~--~~~~~~~~~---~~----~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (534)
                      ||+|+.....  .++..+..+   +.    .       . +++...++.+..+++++++|.++...+......+......
T Consensus       264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  343 (505)
T TIGR00898       264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY  343 (505)
T ss_pred             CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence            8887532111  011001000   00    0       0 0000011123467889999988766655544433332222


Q ss_pred             hchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-
Q psy14136        308 IPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN-  386 (534)
Q Consensus       308 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  386 (534)
                      ..++.++.+ .+.+.   .......++..+++.++.+++.||+|||+.+          .++.++.+++++.+.+.+.. 
T Consensus       344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~----------~~~~~~~~~~~l~~~~~~~~~  409 (505)
T TIGR00898       344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTM----------AASLLLAGVALLLLLFVPVDL  409 (505)
T ss_pred             HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHcCCCc
Confidence            223333332 34442   2334456778889999999999999998753          44455555555555554422 


Q ss_pred             hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHH
Q psy14136        387 VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGA  465 (534)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~  465 (534)
                      .+......++..++.+..++..+.+..|.+|++ |+++.|+.++...+|++++|.+.+ + +.     .++...+++.++
T Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~-----~~~~~~~~~~~~  482 (505)
T TIGR00898       410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GE-----KWLFLPLVLFGG  482 (505)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HH-----HHHhhHHHHHHH
Confidence            234444455555666666777788889999977 999999999999999999999998 3 33     456667777777


Q ss_pred             HHHHHHHHHHhhcCCccccC
Q psy14136        466 VGSCTYFFYQVLGTSEVQPW  485 (534)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~~~  485 (534)
                      +.+++.++.++++++++++.
T Consensus       483 ~~~~~~~~~~~lpet~~~~l  502 (505)
T TIGR00898       483 LALLAGILTLFLPETKGVPL  502 (505)
T ss_pred             HHHHHHHHHHcCcCCCCCCC
Confidence            77777777777776655443

>KOG1330|consensus

Probab=100.00  E-value=2e-33  Score=269.75  Aligned_cols=376  Identities=14%  Similarity=0.180  Sum_probs=277.7

Q ss_pred             cchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136         12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN   91 (534)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~   91 (534)
                      ..+.++.+++.++..+++++||..+..+.+++                                                
T Consensus        28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v------------------------------------------------   59 (493)
T KOG1330|consen   28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEV------------------------------------------------   59 (493)
T ss_pred             cccchHHHHHHHHHHHHHHhhhhhhhhhhHHH------------------------------------------------
Confidence            34445666677999999999999999888777                                                


Q ss_pred             CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14136         92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIA  171 (534)
Q Consensus        92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g  171 (534)
                         ++.||++++..|++.+.+.+.+++++|+.|+++|||.||+++.+|..+|+++.+.+++.  ..||+++++|.+.|+|
T Consensus        60 ---~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs--~~Fwq~~l~R~~vGiG  134 (493)
T KOG1330|consen   60 ---QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS--NHFWQVLLCRGFVGIG  134 (493)
T ss_pred             ---HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH--HHHHHHHHHHHHhccc
Confidence               77999999999999999999999999999999999999999999999999999998777  5899999999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcC-CchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      .+...|+++++++|.+|..+|+++++ ++.+..+|..+|.+.+..+.++.+ |||.|++.++++++..++.+++.+|+++
T Consensus       135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r  214 (493)
T KOG1330|consen  135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER  214 (493)
T ss_pred             hhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence            99999999999999999999999999 668999999999999999888765 9999999999999999999999888665


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh---hCCccccch
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI---LGFSIQTNG  326 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~s~~~~~  326 (534)
                      ......+.+.+.        .........+.+.+.+++.+....+......+....+..|.|.++...   .|.+..+..
T Consensus       215 ga~~~~~~~~~~--------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~  286 (493)
T KOG1330|consen  215 GARDEVDGENKM--------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATL  286 (493)
T ss_pred             ccccccccCCcC--------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccch
Confidence            422111111100        000112223445566667777777777777777777777888776543   345666667


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHhhhccc-chhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHhhhc
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIM-SLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  404 (534)
                      ++..+...++.+|.+.+|.++||+.++..- ....+.......+..+....+.+..... .+.+..+++.+++-......
T Consensus       287 ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~  366 (493)
T KOG1330|consen  287 IFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFN  366 (493)
T ss_pred             hhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            777888899999999999999997663221 1111111122222222222222222222 12333344444444444455


Q ss_pred             ccccchhhhccCC-CchhHHHHHHhHHHHh-hhhHHhHhhhhcccc
Q psy14136        405 YAGAMANVVDIGP-NFAGPILAFAQTIHMT-ASFLSPMVAGYFLQD  448 (534)
Q Consensus       405 ~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~  448 (534)
                      ++...-...++.| ++|.++.++...+..+ |.+-+|.+.|.+.|.
T Consensus       367 ~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~  412 (493)
T KOG1330|consen  367 WATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK  412 (493)
T ss_pred             cccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence            5555555566665 5599999999888765 455566699988876

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=100.00  E-value=7.4e-33  Score=287.83  Aligned_cols=362  Identities=16%  Similarity=0.185  Sum_probs=249.9

Q ss_pred             cCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcchhh
Q psy14136         99 DWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQGIASGLTWP  177 (534)
Q Consensus        99 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G~g~g~~~~  177 (534)
                      +.+..+.+++.+++.++..+++++.|+++||+|||++++++.++++++.+++.+.. ..+++.++++|+++|++.+...+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~  146 (481)
T TIGR00879        67 SYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASA  146 (481)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHh
Confidence            35689999999999999999999999999999999999999999999998875432 23466899999999999999999


Q ss_pred             hHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHH---HHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        178 AMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLC---GFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       178 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~---~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ...+++.|++|+++|++++++ ..+..+|..+++.++   ..+.+..+||+.|++.++..++. ++..+++||+|+....
T Consensus       147 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~  225 (481)
T TIGR00879       147 LVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVG  225 (481)
T ss_pred             HHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHH
Confidence            999999999999999999995 478899999999998   66667789999999966555544 4445566776532110


Q ss_pred             c--chhhhhhhhhccCccc-----------------cCCCCCcccHHHhhc------CHHHHHHHHHHHHHHHHHHHHHh
Q psy14136        254 I--TRKELDYIQENIEPTI-----------------VGSKGLKVPWVSILT------SPPAWAIGITTFGRIWVHYIFII  308 (534)
Q Consensus       254 ~--~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  308 (534)
                      .  .++..+...+......                 .+.+..+..++++++      .+.++...+..+........+..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (481)
T TIGR00879       226 KGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMY  305 (481)
T ss_pred             cCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHH
Confidence            0  0000000000000000                 000000111223332      22333333333333333444556


Q ss_pred             chhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh---hcCC
Q psy14136        309 PGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG---YLGC  385 (534)
Q Consensus       309 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  385 (534)
                      +.|.++++ .|++..+.+.......++.+++.++.+++.||+++|+.+          .++.++.+++++.+.   ....
T Consensus       306 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~  374 (481)
T TIGR00879       306 YSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL----------LIGAAGMAICLFVLGILGASFV  374 (481)
T ss_pred             HHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHhhccc
Confidence            67777665 799988888888899999999999999999999988753          333334344333333   1111


Q ss_pred             c------hhHHHHHHHHHHHHhh-hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHH
Q psy14136        386 N------VALVLITWFVAVTLIT-ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWR  457 (534)
Q Consensus       386 ~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~  457 (534)
                      .      .........+...+.+ ...+.......|..|++ |+++.|+.+...++|++++|.+.+.+.+.     .+|.
T Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~-----~~~~  449 (481)
T TIGR00879       375 TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES-----IGVG  449 (481)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCcc
Confidence            1      2222222222223333 33455566778888876 99999999999999999999999999888     6788


Q ss_pred             HHHHHHHHHHHHHHHHHHhh
Q psy14136        458 QVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       458 ~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ..|++.++++++++++.+++
T Consensus       450 ~~f~~~~~~~~~~~i~~~~~  469 (481)
T TIGR00879       450 GVFIFFGGLNVLGLIFVYFF  469 (481)
T ss_pred             ceehhHHHHHHHHHHHHhee
Confidence            88888888877777665544

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=100.00  E-value=3.2e-33  Score=278.69  Aligned_cols=325  Identities=25%  Similarity=0.386  Sum_probs=250.7

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|.|+.+++++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.++  ++++.+++.|++.|++.+.
T Consensus        24 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~  101 (352)
T PF07690_consen   24 AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--SNFWLLLIARFLLGIGSGF  101 (352)
T ss_dssp             HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHH
T ss_pred             HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--hhHHHHhhhcccccccccc
Confidence            45899999999999999999999999999999999999999999999999996665443  5777999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|+++++ ...+.++|.++++.+++.+.+.++||+.|++.+++.++..++..++.++++++++.
T Consensus       102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~  181 (352)
T PF07690_consen  102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRER  181 (352)
T ss_dssp             HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT-
T ss_pred             ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccc
Confidence            99999999999999999999999 55789999999999999999889999999999999888877554555555444332


Q ss_pred             cchhhhhhhhhccCccccCCCCCcc-cHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc-cccchhHhhh
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKV-PWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFS-IQTNGLLTGA  331 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s-~~~~~~~~~~  331 (534)
                      .++++.+.          +.++... .++.++++|.+|......++..........+.|.|+++.+|.+ ..+.+.+...
T Consensus       182 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  251 (352)
T PF07690_consen  182 ESPKESES----------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSI  251 (352)
T ss_dssp             -SSTTTT------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHH
T ss_pred             cccccccc----------ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHH
Confidence            22222100          0011111 3566777777775666666666677788999999988889999 7889999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchh
Q psy14136        332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAN  411 (534)
Q Consensus       332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (534)
                      ..+.++++.++.+++.||+++++..       ........+..+.+......+ +..+.....++.+++.+...+.....
T Consensus       252 ~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~  323 (352)
T PF07690_consen  252 FGIVGIIGSLLAGRLSDRFGRRRRL-------LIAILLLILGALGLLLLPFSS-SPVWLIIALFLIGFGFGIVFPILFSL  323 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHH-------HHHHHHHHHHHHHHCCSHHHC-HHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCcHHHH-------HHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999876542       111222222222222222222 34455556666777888888889999


Q ss_pred             hhccCCCc-hhHHHHHHhHHHHhhhhHHh
Q psy14136        412 VVDIGPNF-AGPILAFAQTIHMTASFLSP  439 (534)
Q Consensus       412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~  439 (534)
                      ..+..|++ +|++.|+.+...++++.++|
T Consensus       324 ~~~~~~~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  324 IQELVPPEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998865 99999999999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11043 putative transporter; Provisional

Probab=100.00  E-value=2.5e-31  Score=270.08  Aligned_cols=323  Identities=16%  Similarity=0.199  Sum_probs=249.2

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+++++.|++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++  ++++.+++.|+++|++.+.
T Consensus        33 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~  110 (401)
T PRK11043         33 QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV--ESAAQLLVLRFVQAVGVCS  110 (401)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHhhhHH
Confidence            55899999999999999999999999999999999999999999999999988886554  6899999999999999888


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|++++++..+ ......+|..++|.+++++.+.+|||+.|++.+++.++..+..++. ++++++++ 
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-  188 (401)
T PRK11043        111 AAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL-KPSKKARK-  188 (401)
T ss_pred             HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CCCCCccc-
Confidence            88888999999999999999888 5577889999999999999999999999999888877766555444 33322111 


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                        +                 ++.+.++++++++|+++...+...+.......+..+.|.++++ +|++..+.++......
T Consensus       189 --~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~  248 (401)
T PRK11043        189 --Q-----------------SQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQT  248 (401)
T ss_pred             --c-----------------chHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHH
Confidence              0                 0112246778888888876666666666667777888998876 7999999998888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY-LGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      ++.+++.++.+++.||+++|+.+.       ...+...+..+.+..... ...+.+.......+.+++.+...+......
T Consensus       249 ~~~~~g~~~~~~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (401)
T PRK11043        249 IAFLVGGYGCRAALQKWGGEQLLP-------WLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQA  321 (401)
T ss_pred             HHHHHHHHHHHHHHHHcCHHHHHH-------HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999998876431       111122222222222222 122333344444555666666677666666


Q ss_pred             hccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        413 VDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       413 ~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .+..|+++|++.|+.+.....++..++.+.|.+.+.
T Consensus       322 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~  357 (401)
T PRK11043        322 LRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST  357 (401)
T ss_pred             hhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            676787899999999999999999999999999876

>TIGR00900 2A0121 H+ Antiporter protein

Probab=100.00  E-value=2.1e-32  Score=274.12  Aligned_cols=332  Identities=16%  Similarity=0.103  Sum_probs=260.9

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL---HYGALIALRSIQGIA  171 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~---~~~~l~~~r~l~G~g  171 (534)
                      ..+++.++.+.|++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.+++...   +++.+++.|++.|++
T Consensus        26 ~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~  105 (365)
T TIGR00900        26 VLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIA  105 (365)
T ss_pred             HHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence            33778899999999999999999999999999999999999999999998888876554211   899999999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK  250 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~  250 (534)
                      .+...+...+++.|++|+++|++++++ ..+..+|.++++.+++.+.+..|||+.|++.++..++..+..+...++++++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (365)
T TIGR00900       106 QAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA  185 (365)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC
Confidence            999999999999999999999999995 4788999999999999999999999999988776666554444332222111


Q ss_pred             CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH-hchhhhhHhhhCCccccchhHh
Q psy14136        251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI-IPGPRYMKTILGFSIQTNGLLT  329 (534)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~s~~~~~~~~  329 (534)
                      +++.+.++ +.           .++....++.++++|.++...+..+.......... .+.|.|.++.+|.+..+.+.+.
T Consensus       186 ~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (365)
T TIGR00900       186 SEIQALSN-AV-----------LRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVL  253 (365)
T ss_pred             ccccccch-hH-----------HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHH
Confidence            11110000 00           01112245678889999888887777777776666 7889999887899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136        330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM  409 (534)
Q Consensus       330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (534)
                      ....++.+++.++.+++.||.++++.+          ..+..+.++.+....+.+.+.+...+..++.+++.+...+...
T Consensus       254 ~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  323 (365)
T TIGR00900       254 AAFGLGALLGALLLGLLGRYFKRMALM----------TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQG  323 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhchhHHH----------HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999887643          3334444444554444432245555666666777777777788


Q ss_pred             hhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        410 ANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       410 ~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ....+..|++ |+++.|+.+...+++..++|.+.|.+.|.
T Consensus       324 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~  363 (365)
T TIGR00900       324 TLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH  363 (365)
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888866 99999999999999999999999998876

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=100.00  E-value=1.3e-31  Score=269.92  Aligned_cols=330  Identities=17%  Similarity=0.235  Sum_probs=250.9

Q ss_pred             cCCCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         87 LEKPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALR  165 (534)
Q Consensus        87 ~~~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r  165 (534)
                      ++.|.+|. .+++|+|+.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.+.  ++++.+++.|
T Consensus         9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~   86 (377)
T PRK11102          9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA--QTIDQLIYMR   86 (377)
T ss_pred             HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHH
Confidence            44577777 78899999999999999999999999999999999999999999999999999886554  6899999999


Q ss_pred             HHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136        166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA  244 (534)
Q Consensus       166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~  244 (534)
                      ++.|++.+...+...+++.|++|+++|+++++ .+.+..+|..+++.+++.+.+..+||+.|++.+++.++..++..+..
T Consensus        87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (377)
T PRK11102         87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFI  166 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999 45788999999999999999999999999998888877766666666


Q ss_pred             cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc
Q psy14136        245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT  324 (534)
Q Consensus       245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~  324 (534)
                      ||+++++++.+.+               .++...++++.+++|.++...+..++.......+..+.|.++.+.+|+++.+
T Consensus       167 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~  231 (377)
T PRK11102        167 PETLPKERRQPFH---------------LRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN  231 (377)
T ss_pred             CccCcccccCCCC---------------hHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence            6654322110000               0011224567888998888777777777777777888888888888999999


Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH---HHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV---IPALLVMLIGYLGCNVALVLITWFVAVTLI  401 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (534)
                      .+.+.....++.+++.++.+++.||+++|+.+          ..+..   +.++.+......+...+...+.......+.
T Consensus       232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (377)
T PRK11102        232 FGYYFALNIVFLFVMTIINSRFVRRVGALNML----------RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCV  301 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998753          22222   122222222222223333333333333333


Q ss_pred             hhcccccchhhhccCCCchhHHHHHHhHHHH-hhhhHHhHhhh
Q psy14136        402 TASYAGAMANVVDIGPNFAGPILAFAQTIHM-TASFLSPMVAG  443 (534)
Q Consensus       402 ~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~-~g~~i~~~~~g  443 (534)
                      +...........+..|+++|++.++.+.... +|..+++.+.+
T Consensus       302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~  344 (377)
T PRK11102        302 SMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSL  344 (377)
T ss_pred             HHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4444444556677778779999999887654 55566665543

>PRK12382 putative transporter; Provisional

Probab=100.00  E-value=4.4e-31  Score=267.49  Aligned_cols=338  Identities=16%  Similarity=0.123  Sum_probs=245.2

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA------AVLHYGALIALRSIQ  168 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------~~~~~~~l~~~r~l~  168 (534)
                      ++++|+|+.++|++.+++.+++.+++++.|+++||+||||+++.+.++.+++.+.....      ..++++.++++|+++
T Consensus        43 ~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~  122 (392)
T PRK12382         43 HHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLIL  122 (392)
T ss_pred             HHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999999988877765432111      135789999999999


Q ss_pred             hhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        169 GIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      |++.+...+...+++.|++|+++|+++++++ .+...|..+++++++++.+.+|||+.+.+..++.++..    .+.++.
T Consensus       123 G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~~  198 (392)
T PRK12382        123 GFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW----AFNGTV  198 (392)
T ss_pred             HHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH----HHHHhc
Confidence            9999999999999999999999999999954 67889999999999999998999988766544433222    122222


Q ss_pred             CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136        248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL  327 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~  327 (534)
                      |+.+++.  ++               +   .+.++.++  .++...+..++..........+.|.|+++ .|++  ..+.
T Consensus       199 ~~~~~~~--~~---------------~---~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~  253 (392)
T PRK12382        199 RKVPAHA--GE---------------R---PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGF  253 (392)
T ss_pred             cCCCCCc--cc---------------C---chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHH
Confidence            2211100  00               0   01122221  12222222233334455566778888876 4654  3456


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136        328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG  407 (534)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (534)
                      ......++.+++.++.|++.||+++|+.+          ..+..+..+....+...+ +.+......++.+++.+...+.
T Consensus       254 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~  322 (392)
T PRK12382        254 TLTAFGGAFVLMRVLFGWMPDRFGGVKVA----------IVSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLIFPA  322 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCeeh----------HHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhHHHH
Confidence            66667788889999999999999998764          344444444444444444 4444455555556666666666


Q ss_pred             cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ......+..|++ ||++.|+.+....+|..++|.+.|.+.|.     .+|+..|++.+++.+++.++.+..
T Consensus       323 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~  388 (392)
T PRK12382        323 LGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-----FGYPSVFLAGAISAVLGIIVTILS  388 (392)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHhh
Confidence            666666766654 99999999999999999999999999998     789999999998888777766544

>TIGR00895 2A0115 benzoate transport

Probab=100.00  E-value=6.8e-32  Score=273.77  Aligned_cols=370  Identities=21%  Similarity=0.259  Sum_probs=276.2

Q ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCC
Q psy14136         11 AVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKP   90 (534)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P   90 (534)
                      ..+++|..+..+++.++...++....+...|.+                                               
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------   43 (398)
T TIGR00895        11 LSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAI-----------------------------------------------   43 (398)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-----------------------------------------------
Confidence            345566677777778888888888888888877                                               


Q ss_pred             CCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136         91 NVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI  170 (534)
Q Consensus        91 ~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~  170 (534)
                          .+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+++.++  ++++.+++.|++.|+
T Consensus        44 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~  117 (398)
T TIGR00895        44 ----SAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA--TNVTQLLILRFLAGL  117 (398)
T ss_pred             ----hhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc--cchHHHHHHHHHHhc
Confidence                45889999999999999999999999999999999999999999999999988886554  689999999999999


Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      +.+...+...+++.|++|+++|++++++. .+..+|..+++.+++.+.+..|||+.|++.+++.++..++.++++||+++
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (398)
T TIGR00895       118 GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID  197 (398)
T ss_pred             ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence            99999999999999999999999999954 78899999999999999999999999999877777766666777777654


Q ss_pred             CCcccchhhhh----hhhhcc--------CccccCCCCCcccHHHhhcC---HHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136        250 KHPRITRKELD----YIQENI--------EPTIVGSKGLKVPWVSILTS---PPAWAIGITTFGRIWVHYIFIIPGPRYM  314 (534)
Q Consensus       250 ~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l  314 (534)
                      ...+.++++.+    +.....        .+++.+.+..+..++.++++   +..+...+..++..........+.|.+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (398)
T TIGR00895       198 FLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM  277 (398)
T ss_pred             HHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22111111110    000000        00000001111112223332   3344555555566666777778888554


Q ss_pred             HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q psy14136        315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITW  394 (534)
Q Consensus       315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (534)
                      + .+|.+..+.+.......++.+++.++.+++.||+++|+.           .....+.++....+.....+........
T Consensus       278 ~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (398)
T TIGR00895       278 V-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-----------ALLLLLGAVFAVLVGSTLFSPTLLLLLG  345 (398)
T ss_pred             H-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-----------HHHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence            4 589999999999999999999999999999999998732           1222222222222222122455555666


Q ss_pred             HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      ++.+++.+...+.......+..|++ |+++.|+.+.+..+|..++|.+.|++
T Consensus       346 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       346 AIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            6677777777888888899998866 99999999999999999999999876

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=100.00  E-value=1.8e-31  Score=271.95  Aligned_cols=345  Identities=19%  Similarity=0.201  Sum_probs=254.7

Q ss_pred             ccccCChhh-----HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136         96 GEFDWDTTT-----QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI  170 (534)
Q Consensus        96 ~~~~~s~~~-----~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~  170 (534)
                      +++|++..+     .|++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.+.  ++++.+++.|++.|+
T Consensus        42 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~  119 (408)
T PRK09874         42 EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA--QNIWQFLILRALLGL  119 (408)
T ss_pred             HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHH
Confidence            367776544     5899999999999999999999999999999999999999988875544  689999999999999


Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      +.+ ..+....++.+++|+++|++++++ ..+..+|..+++.+++.+.+..+||+.|++.+++.++..+..+++.||+++
T Consensus       120 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (408)
T PRK09874        120 LGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ  198 (408)
T ss_pred             hhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence            865 568888899999999999999994 477889999999999999998999999999988877777766666666532


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHH-HHHHHHHHHHHHHHHhchhhhhHhhhCCccc---cc
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAI-GITTFGRIWVHYIFIIPGPRYMKTILGFSIQ---TN  325 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~---~~  325 (534)
                      +.++.++.+                  ..+..+.+++|+++.. ....+........+..+.+.|..+..+....   ..
T Consensus       199 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (408)
T PRK09874        199 PVSKKEMLH------------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFIS  260 (408)
T ss_pred             cccchhhhH------------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence            211110000                  0112334556655443 2333334444455566778888774332221   23


Q ss_pred             hhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcc
Q psy14136        326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASY  405 (534)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (534)
                      +.+....+++.+++.+..|++.||+++|+.+          ..+..+..+..+.....+ +.+...+..++.+++.+...
T Consensus       261 g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~  329 (408)
T PRK09874        261 GMIASVPGVAALLSAPRLGKLGDRIGPEKIL----------ITALIFSVLLLIPMSFVQ-TPLQLGILRFLLGAADGALL  329 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccchhH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhHhhH
Confidence            4555666788888999999999999988763          334444444444444443 45555555556666667666


Q ss_pred             cccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        406 AGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       406 ~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +.......+..|++ +|+.+++.+....+|..++|.+.|.+.+.     .+|+..|++.+++.+++.+..+..
T Consensus       330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-----~g~~~~f~~~~~~~l~~~~~~~~~  397 (408)
T PRK09874        330 PAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-----YGFRAVFLVTAGVVLFNAVYSWNS  397 (408)
T ss_pred             HHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-----cchhHHHHHHHHHHHHHHHHHHHH
Confidence            66666767766655 99999999999999999999999999988     789999999998888877766554

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=100.00  E-value=2.2e-30  Score=262.59  Aligned_cols=324  Identities=18%  Similarity=0.177  Sum_probs=252.8

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|+|+.+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++.+.  ++++.+++.|++.|++.+.
T Consensus        35 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~g~~~~~  112 (394)
T PRK11652         35 ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA--HSLTVLIAASAIQGLGTGV  112 (394)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHhhhhH
Confidence            55899999999999999999999999999999999999999999999999998886554  6899999999999999998


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+....++.|++++++|+++.+.+ .+..+|..++|.+++.+.+..|||+.|++.+++.++..+...++.||+++.+++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (394)
T PRK11652        113 GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADAR  192 (394)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccc
Confidence            8899999999999999999999954 678899999999999999889999999998877776665555566665432211


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                      .  +                 +.+..+++++++|+++...+..+........+..+.+.++++.+|.+..+.+++.....
T Consensus       193 ~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  253 (394)
T PRK11652        193 R--T-----------------RVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPI  253 (394)
T ss_pred             h--h-----------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHH
Confidence            0  0                 01234667888888887666666666666666777888998888999999898888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      ++.+++.++.+++.||.+++..         ....+..+..+.+...... ..+.+......++.+++.+...+......
T Consensus       254 ~~~~~g~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  324 (394)
T PRK11652        254 PAAFFGAWFAGRPNKRFSTLMW---------QSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGA  324 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888888999998874321         1122222222222222221 12344455555666677777788888888


Q ss_pred             hccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        413 VDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       413 ~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .+..|+++|++.++.+....+|+.+++.+.+.+.+.
T Consensus       325 ~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~  360 (394)
T PRK11652        325 MEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQT  360 (394)
T ss_pred             HhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            888888899999999999999999999999988766

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=100.00  E-value=1.8e-30  Score=263.03  Aligned_cols=317  Identities=16%  Similarity=0.134  Sum_probs=230.8

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|.|..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+++.++  ++++.+++.|+++|++.+.
T Consensus        30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~--~~~~~~~~~~~l~g~~~~~  107 (392)
T PRK10473         30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA--ETSSLFLAGRFLQGIGAGC  107 (392)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhhhH
Confidence            55899999999999999999999999999999999999999999999999998886554  6889999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|+++.+ ......+|..++|.+++.+.+..|||+.|++.+++.++..++.++..||+++++++
T Consensus       108 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  187 (392)
T PRK10473        108 CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAP  187 (392)
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccC
Confidence            99999999999999999999999 45677889999999999888888999999999888887777766666665432111


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                      .+                  .......++.+++|+++...+...+.......+..+.|.++++.+|++..+.+.+.....
T Consensus       188 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  249 (392)
T PRK10473        188 AA------------------SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTA  249 (392)
T ss_pred             Cc------------------cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHH
Confidence            00                  001123456778888776665555555555566677788888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                      ++.+++.++.+++.||+++|+.+          .++..+..+....+.... ..........+...+.+...+.  ....
T Consensus       250 ~~~i~~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~--~~~~  316 (392)
T PRK10473        250 GVSMTVSFSTPFALGIFKPRTLM----------LTSQVLFLAAGITLALSP-SHAVSLFGITLICAGFSVGFGV--AMSQ  316 (392)
T ss_pred             HHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHH--HHHH
Confidence            99999999999999999988653          344444444444333332 2222222222323333332222  2233


Q ss_pred             ccCCCc--hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        414 DIGPNF--AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       414 ~~~p~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      +..|.+  .|.+.++.    .++..+++.+.+++.+.
T Consensus       317 ~~~~~~~~~g~~~~~~----~~~~~~g~~~~~~l~~~  349 (392)
T PRK10473        317 ALGPFSLRAGVASSTL----GIAQVCGSSLWIWLAAV  349 (392)
T ss_pred             HhccCcccccHHHHHH----HHHHHHHHHHHHHHHHH
Confidence            344432  44444444    45555666666666665

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=100.00  E-value=2.7e-31  Score=266.52  Aligned_cols=345  Identities=17%  Similarity=0.210  Sum_probs=256.5

Q ss_pred             HHHHHHHHHHHhhhcccEEEee-eecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCcccc
Q psy14136         21 MSFTGFLVSFMMRTDINIAMVA-MVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFD   99 (534)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~   99 (534)
                      ..++++++.+.++..++...|. +                                                   ++++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------~~~~~   33 (366)
T TIGR00886         5 FSWFGFFLSFSVWFAFSPLAVQMI---------------------------------------------------KDDLG   33 (366)
T ss_pred             HHHHHHHHHHHHHHHhHHhhhHHH---------------------------------------------------HHHhC
Confidence            3577788888899888888885 5                                                   55999


Q ss_pred             CChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhcchhhh
Q psy14136        100 WDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL-HYGALIALRSIQGIASGLTWPA  178 (534)
Q Consensus       100 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~-~~~~l~~~r~l~G~g~g~~~~~  178 (534)
                      +|+.+.+++.+++.+++++++++.|+++||+|||++++++.++.+++.++++++  + +++.+++.|+++|++.+ ..+.
T Consensus        34 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~g~~~~-~~~~  110 (366)
T TIGR00886        34 LSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA--VQSYSVLLLLRLFIGIAGG-SFAS  110 (366)
T ss_pred             CCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhch-hhHh
Confidence            999999999999999999999999999999999999999999999999886655  6 89999999999999965 4567


Q ss_pred             HHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh----------hcCCchhh-hhhchhhHHHHHHhhhhccC
Q psy14136        179 MYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA----------HYGWRSVF-YTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       179 ~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~----------~~gwr~~f-~i~~~~~li~~i~~~~~~~~  246 (534)
                      ..+++.|++|+++|+++++++ ...++|..+++.+++.+..          +.+||+.| +..+++..+..++.+.+.+|
T Consensus       111 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~  190 (366)
T TIGR00886       111 CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGAD  190 (366)
T ss_pred             HHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhccc
Confidence            889999999999999999955 5677788777777766654          24899999 44455555555555556666


Q ss_pred             CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136        247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG  326 (534)
Q Consensus       247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~  326 (534)
                      .|+++++.++.+.+   +....   ..+......++.+++|+++...+..++.......+..+.|.|+++.+|.++.+++
T Consensus       191 ~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  264 (366)
T TIGR00886       191 TPPGKPATGKLSFK---GARWS---VGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAG  264 (366)
T ss_pred             CCcccccchhcccc---ccccc---ccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence            55432211110000   00000   0011112456788889998888887777777788889999999998999999999


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh--hcCC-chhHHHHHHHHHHHHhhh
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG--YLGC-NVALVLITWFVAVTLITA  403 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~  403 (534)
                      .+.....+.+++++++.|++.||+++|+.+          ..+......+..++.  .... +.........+...+.+.
T Consensus       265 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  334 (366)
T TIGR00886       265 AYASLGGLLGSLARPLGGAISDRLGGARKL----------LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGA  334 (366)
T ss_pred             HHHHHHHHHHHHHhhccchHHHhhccchhH----------HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhcc
Confidence            999899999999999999999999998653          222222222222222  2211 333344444555566666


Q ss_pred             cccccchhhhccCCCchhHHHHHHhHHHHhhh
Q psy14136        404 SYAGAMANVVDIGPNFAGPILAFAQTIHMTAS  435 (534)
Q Consensus       404 ~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~  435 (534)
                      ..+.......+..|+++|+++|+.+..+++|+
T Consensus       335 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~  366 (366)
T TIGR00886       335 GNGSTFALVPHIFRRATGAVSGLVGAIGNLGG  366 (366)
T ss_pred             ccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence            66777788888889889999999999888763

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.98  E-value=1.2e-30  Score=263.13  Aligned_cols=335  Identities=15%  Similarity=0.085  Sum_probs=244.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++  ++++.++++|+++|++.+.
T Consensus        33 ~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~  110 (381)
T PRK03633         33 LAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM--VGFWSWLAWRFVAGIGCAM  110 (381)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999999999999999999886654  6899999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+.+.+..++++|+++++. ..+.++|..+|+.+++.+.+...|...+ ..+........ .+ +.+.++++.+ 
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~~~-  186 (381)
T PRK03633        111 IWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW-VTGLVLAAILP-LL-FTRILNQQAE-  186 (381)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-HHHHHHHHHHH-HH-HhcccCCCCC-
Confidence            999988888999999999999994 5789999999999999987764343333 32222222111 11 2122111100 


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                                          +++..++++.+++|.++......+...........++|.|+++ .|.+....+.+.+...
T Consensus       187 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~  245 (381)
T PRK03633        187 --------------------NHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLV  245 (381)
T ss_pred             --------------------CCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence                                0011234567788877765544444444555666788999987 6999888999989999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                      ++.+++++..|++.||+++|+.+          ..+..+..++...+.  . .... .....+.+.+.....+.......
T Consensus       246 ~~~~~~~~~~g~l~dr~~~~~~l----------~~~~~~~~~~~~~~~--~-~~~~-~~~~~l~g~~~~~~~p~~~~~~~  311 (381)
T PRK03633        246 SAGILGQWPIGRLADRFGRLLVL----------RVQVFVVILGSIAML--S-QAAM-APALFILGAAGFTLYPVAMAWAC  311 (381)
T ss_pred             HHHHHHHhhhHHHHHHcCcHHHH----------HHHHHHHHHHHHHHh--h-hHHH-HHHHHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999998653          233333333322221  1 1111 12223333333445566667777


Q ss_pred             ccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        414 DIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       414 ~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                      +..|++ ++...+..+...++|..++|.+.|++.|.     .+++..|++.+.+.++..+..+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~-----~g~~~~f~~~~~~~l~~~~~~~  369 (381)
T PRK03633        312 EKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN-----YSDNLLFIMIASVSFIYLLMLL  369 (381)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCccHHHHHHHHHHHHHHHHHH
Confidence            777654 77788888888899999999999999998     7888888888777765554433

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.98  E-value=2.7e-30  Score=261.56  Aligned_cols=345  Identities=16%  Similarity=0.140  Sum_probs=254.6

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+|+.++|++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+++++.  ++++.+++.|+++|++.+.
T Consensus        38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~~~  115 (400)
T PRK11646         38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA--HEPWLLWLSCILSGLGGTL  115 (400)
T ss_pred             HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999999999999999999886554  6899999999999999998


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|++++++ ....++|..+||++++++. .+|||+.|++.++..++..++..+..||.++++. 
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~-  193 (400)
T PRK11646        116 FDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV-  193 (400)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccccc-
Confidence            899999999999999999999995 4789999999999999998 6799999999887777766555555554211100 


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                        +                 ++.+.++++++++|+++...+..+...........+.|.|+++..+ ++.+.+.+.+...
T Consensus       194 --~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~  253 (400)
T PRK11646        194 --R-----------------TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEA  253 (400)
T ss_pred             --c-----------------hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHH
Confidence              0                 0112246678888888766665555444444456788999988544 6677888877777


Q ss_pred             HHHHHHHHHHHHHHHH-HhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        334 LCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      ++...+....+++.|| .+.++.          ...+.++.++....+...+ +.+.......+.+.+.+...+......
T Consensus       254 ~~~~~~~~~~~~~~~~r~~~~~~----------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~~~p~~~~~~  322 (400)
T PRK11646        254 CLSLTLLYPIARWSEKRFRLEHR----------LMAGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSIIAEPARETLS  322 (400)
T ss_pred             HHHHHHHHHHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence            7666655555666554 443322          2344444455555554444 444444444445555566667777888


Q ss_pred             hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                      .+..|++ +|+++|+.+....+|..+||.+.|.+.|..+ +.......++..+++.+++.+...
T Consensus       323 ~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  385 (400)
T PRK11646        323 ASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK-ALNQPELPWMMLGIIGLITLLALY  385 (400)
T ss_pred             HhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh-hcCCcchHHHHHHHHHHHHHHHHH
Confidence            8888755 9999999999999999999999999998811 112244566665665555554433

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.98  E-value=2e-30  Score=261.93  Aligned_cols=345  Identities=12%  Similarity=0.039  Sum_probs=249.8

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW  176 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~  176 (534)
                      +++.++.+.+++.+.+.+++.++++++|+++||+|||++++++.++.++++++++++  .+.   ++.|+++|++.+...
T Consensus        32 ~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~--~~~---~~~r~l~G~~~a~~~  106 (393)
T PRK11195         32 ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG--IHP---LLAYGLVGIGAAAYS  106 (393)
T ss_pred             HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH--HHH---HHHHHHHHHHHHHHH
Confidence            788889999999999999999999999999999999999999999999988876554  343   788999999999999


Q ss_pred             hhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccc
Q psy14136        177 PAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRIT  255 (534)
Q Consensus       177 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~  255 (534)
                      |+..+++.|++|+++|++++++ .....+|.++||.+++++.+. .|+..+.+.+...++. ++..+.+||+|++++..+
T Consensus       107 pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~  184 (393)
T PRK11195        107 PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQS  184 (393)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccC
Confidence            9999999999999999999995 467889999999999999885 4777777766554433 334455676543322111


Q ss_pred             hhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHH
Q psy14136        256 RKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLC  335 (534)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~  335 (534)
                      .++....+           .....++.++++|.+........+............|.|+++.+|.++.+.|++.....++
T Consensus       185 ~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g  253 (393)
T PRK11195        185 WNPIALLR-----------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIG  253 (393)
T ss_pred             CCHHHHHH-----------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHH
Confidence            11100000           0011245677888776555554444555556666778888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhcc
Q psy14136        336 SYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDI  415 (534)
Q Consensus       336 ~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (534)
                      .++++++.+++.||.++++..          ..+.. .++..+.+...+ +.+......++.+++.+...+...+..++.
T Consensus       254 ~i~g~~~~~~l~~~~~~~~~~----------~~g~~-~~~~~~~~~~~~-~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~  321 (393)
T PRK11195        254 IAVGAGAAARLVTLETVLRVL----------PAGIL-MGLVVLLMALQH-SLLPAYPLLILIGALGGFFVVPMNALLQHR  321 (393)
T ss_pred             HHHHHHHHHHHhcCCcccchH----------HHHHH-HHHHHHHHHHHh-HHHHHHHHHHHHHHhhhhhhhhHHHHHHhh
Confidence            999999999999987776542          23322 223333333333 444444555556666666666677777777


Q ss_pred             CCCc--hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        416 GPNF--AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       416 ~p~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .|++  +|++.++.+...+++..++..+.+.+ +.     .+.+..+++.+...+++..+.+.+
T Consensus       322 ~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~  379 (393)
T PRK11195        322 GHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VK-----LGVPVVAVIVGFGLLVALAMALLW  379 (393)
T ss_pred             CcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HH-----cCCCHHHHHHHHHHHHHHHHHHHH
Confidence            7764  69999999999999999999999866 44     355555555554444544444444

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.98  E-value=2.3e-30  Score=257.66  Aligned_cols=322  Identities=26%  Similarity=0.407  Sum_probs=280.5

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++..++.+++.+.  ++++.+++.|++.|++.+.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~  103 (352)
T cd06174          26 AEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA--SSLWLLLVGRFLLGLGGGA  103 (352)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHccccc
Confidence            34778899999999999999999999999999999999999999999999999886555  6899999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|++.++ ......+|..+++.+++.+.+..+||+.|++.+++.++..+...+. +        
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------  174 (352)
T cd06174         104 LYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L--------  174 (352)
T ss_pred             ccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H--------
Confidence            99999999999999999999999 5578999999999999999999999999999988877766655443 2        


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                                                       |.++...+..++..........+.|.+..+.+|.+..+.+.......
T Consensus       175 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (352)
T cd06174         175 ---------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFG  221 (352)
T ss_pred             ---------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence                                             45677777888888888889999999999877999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        334 LCSYLSSVLFCYLADQLFVRN-IMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      ++..++.++.+++.||+++|+ .          ...+..+..++.......+ +.+......++.+++.+...+......
T Consensus       222 ~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~  290 (352)
T cd06174         222 LGGILGALLGGLLSDRLGRRRLL----------LLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLA  290 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHH
Confidence            999999999999999999987 4          3455666666666666555 566667777777888888888889999


Q ss_pred             hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      .+..|++ |++.+|+.+....++..++|.+.|.+.+.     .+|+..+++.+++.+++.+....
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-----~~~~~~~~~~~~~~~i~~i~~~~  350 (352)
T cd06174         291 SELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-----GGYGGVFLILAALALLAALLLLL  350 (352)
T ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcchHHHHHHHHHHHHHHHhee
Confidence            9998855 99999999999999999999999999988     78999999998888877766543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.98  E-value=1e-29  Score=257.22  Aligned_cols=344  Identities=16%  Similarity=0.143  Sum_probs=240.2

Q ss_pred             CccccCChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVF-GFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l-~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~  172 (534)
                      ++++|+|++++|++.+...+ ++.++.+++|+ +||+||||.+ ..+.++.+++..+.+++  ++++.+++.+.+.|...
T Consensus        43 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~  119 (393)
T PRK15011         43 TDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN--RNYFVLLFVGVFLSSFG  119 (393)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHH
Confidence            45899999999999876655 66666655566 9999999875 45566666766664444  67888766665555555


Q ss_pred             cchhhhHHHHHhcccCCCcch--hhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        173 GLTWPAMYALVGHWIPSNERS--RFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~--~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      +...|...+++.++.++++|.  ...+ ...+.++|.+++|++++++.+++|||..|++.+++.++..+..++.+||.++
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~  199 (393)
T PRK15011        120 STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRK  199 (393)
T ss_pred             HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence            677889999999988766553  3345 3467899999999999999999999999999988888877777777777654


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT  329 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~  329 (534)
                      +++..+ ++.              +    ..++  +.+..+...............+..+.|.|+++.+|++..+.+.+.
T Consensus       200 ~~~~~~-~~~--------------~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~  258 (393)
T PRK15011        200 ELPLAT-GTL--------------E----APRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMM  258 (393)
T ss_pred             CCcccc-ccc--------------c----cccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence            322110 000              0    0000  011222233333334445555667899999888899999999888


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136        330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM  409 (534)
Q Consensus       330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (534)
                      +...++.+++.++.|+++||+++|+.+          ..+.....+.+......+ +.+......++.++..+...+...
T Consensus       259 ~~~~~~~i~~~~~~G~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~g~~~~~~~  327 (393)
T PRK15011        259 GTAAGLEIPTMLIAGYFAKRLGKRFLM----------RVAAVAGVCFYAGMLMAH-SPAILLGLQLLNAIYIGILGGIGM  327 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            887788889999999999999998643          222222222222222233 344334444444444444444455


Q ss_pred             hhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        410 ANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       410 ~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      ....|..|+++|+++++.+...++|..++|.+.|.+.|.     .+|+..|++.+++.+++.+..+..+
T Consensus       328 ~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~  391 (393)
T PRK15011        328 LYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEI-----WNYHAVFWFALVMIIATLFCLLRIK  391 (393)
T ss_pred             HHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHhhc
Confidence            667788898899999999999999999999999999998     7899999988888887777766554

>PRK10054 putative transporter; Provisional

Probab=99.97  E-value=5.4e-30  Score=258.95  Aligned_cols=342  Identities=11%  Similarity=0.070  Sum_probs=257.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+|+.++|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.+++  ++++.++++|++.|.+.+.
T Consensus        35 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~  112 (395)
T PRK10054         35 SRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV--NNVTLVVLFFALINCAYSV  112 (395)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999999999998888876554  6888888899999988888


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...++..|.+|+++|+++++ .+...++|.+++|++++++.+ .+||.+|++.+++.++..++..+.+|++++++++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~  191 (395)
T PRK10054        113 FSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT  191 (395)
T ss_pred             HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            88899999999999999999999 557889999999999998875 7999999998887777665555555543221110


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh--hCCccccchhHhhh
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI--LGFSIQTNGLLTGA  331 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~  331 (534)
                         ++.                .....++.+|+|+++...+..++..+....+..+.+.|+...  .+.+....+.+...
T Consensus       192 ---~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  252 (395)
T PRK10054        192 ---ETG----------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPV  252 (395)
T ss_pred             ---chh----------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHh
Confidence               000                001235678889988888777777777666666777777543  34455566777777


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchh
Q psy14136        332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAN  411 (534)
Q Consensus       332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (534)
                      ..+......+..|++.||.++|+.+          ..++.+..+.+..+.....+.+...+...+.+.+.+...+.....
T Consensus       253 ~~~~~~~~~~~~g~~~~~~~~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~  322 (395)
T PRK10054        253 NAAMVVSLQYSVGRRLNAANIRPLM----------TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYML  322 (395)
T ss_pred             hhhheeeehhHHHHHHccCCchhHH----------HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            7777777788889999998877642          344444455444444333244444455556666666666677777


Q ss_pred             hhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        412 VVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      +.+..|++ ++++.+..+ ...+|..+||.+.|.+.|.     .++...|++.+.+..++.++.
T Consensus       323 ~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~  380 (395)
T PRK10054        323 IDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT-----LPPWSLFVILALAIVAAWLLM  380 (395)
T ss_pred             HHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH-----cChhhHHHHHHHHHHHHHHHH
Confidence            88888866 999988655 5668999999999999999     788888877666655544433

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.97  E-value=9.9e-30  Score=263.44  Aligned_cols=350  Identities=15%  Similarity=0.150  Sum_probs=256.5

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-----CCeeh-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-----GTKTV-FGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQG  169 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G  169 (534)
                      +.|.|..++|.+ +...+.+ ++.+++|+++||+     ||||. +..+.+..+++.+++++.. ..+++.+.+.+++.|
T Consensus        41 ~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~  118 (491)
T PRK11010         41 VENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIA  118 (491)
T ss_pred             hCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence            668899999997 4444444 5889999999999     99985 6677777777766655542 246888999999999


Q ss_pred             hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-hcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-HYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      ++.+...+...+++.|++|+++|+++.++. .+..+|.++++.++.++.+ .+|||..|++.+++.++..+..+ +.||+
T Consensus       119 ~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~-~~~e~  197 (491)
T PRK11010        119 FCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL-LAPEP  197 (491)
T ss_pred             HHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCCC
Confidence            999999999999999999999999999954 7889999999999999988 57999999999888777655444 35665


Q ss_pred             CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136        248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL  327 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~  327 (534)
                      ++..+.   ++..            +++...+++++++++..|...+..++..........+.+.|+.+..|++..+.+.
T Consensus       198 ~~~~~~---~~~~------------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~  262 (491)
T PRK11010        198 TDTIPV---PKTL------------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGL  262 (491)
T ss_pred             cccccc---ccch------------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            432110   0000            0011224667787777776666666666666666778888887778999999999


Q ss_pred             Hhh-hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH---HHHHHhhcCCchhHHHHHHHHHHHHhhh
Q psy14136        328 LTG-APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL---LVMLIGYLGCNVALVLITWFVAVTLITA  403 (534)
Q Consensus       328 ~~~-~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (534)
                      +.. ...++.+++.++.|++.||+++|+.+          .++.++.++   .+..+.....+........++..+..+.
T Consensus       263 ~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l----------~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~  332 (491)
T PRK11010        263 VNKTLGLLATIVGALYGGILMQRLSLFRAL----------MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGM  332 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence            874 55679999999999999999987643          122222121   2222223222333333334443334444


Q ss_pred             cccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        404 SYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       404 ~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      ..+...+...+..+++ +++..|+.+....+|..+++.+.|.+.|.     .||+..|.+.+++.+.+.+.....++
T Consensus       333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-----HGWPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4555667777777776 99999999999999999999999999998     78999999999988888777766644

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.97  E-value=2.1e-29  Score=253.91  Aligned_cols=337  Identities=13%  Similarity=0.083  Sum_probs=259.6

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVF----GFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI  170 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l----~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~  170 (534)
                      .+++|+|..++|++.+++.+...++++++|+++||+|||+..    ..+..+..+  .++  ..+++++.+++.|+++|.
T Consensus        31 l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~--~~~~~~~~l~~~~~l~~~  106 (382)
T TIGR00902        31 LKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFS--AGAHNAWLLFIAIGLFAL  106 (382)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHH--HhhhhHHHHHHHHHHHHH
Confidence            448899999999999999999999999999999999985433    222222222  122  234689999999999999


Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      +.+...|...+++.++  +++|++..+ .....++|.++++++++.+.+++|||..|++.++..++ .+..+. .+++++
T Consensus       107 ~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~-~~~~~~  182 (382)
T TIGR00902       107 FFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAF-MLIGFL-IKPTIP  182 (382)
T ss_pred             HHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH-HHHHHH-cCCCCC
Confidence            9998999999988765  478899999 56888999999999999999999999999887654332 223333 333221


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT  329 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~  329 (534)
                      ++++.  ++.             +.+...+.++++|+|++|...+..++.......+..+.|.|+++ .|.+..+.+.+.
T Consensus       183 ~~~~~--~~~-------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~  246 (382)
T TIGR00902       183 PKDAI--PED-------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLW  246 (382)
T ss_pred             CCccc--ccc-------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHH
Confidence            11110  000             01112346789999999999998888888888899999999987 899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136        330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM  409 (534)
Q Consensus       330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (534)
                      ....++.+++.++.+++.||+++|+.+          .++.++..+....+.+.+ +.+..+...++-++..+...+...
T Consensus       247 ~~~~~~~i~~~~~~~~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~q~l~g~~~~~~~~~~~  315 (382)
T TIGR00902       247 GIGVLAEIIIFAFSNKLFQNCSARDLL----------LISAIACVGRWAIIGAIE-AFPLIFLLQILHCGTFAVCHLAAM  315 (382)
T ss_pred             HHHHHHHHHHHHHhHHHHhhCCHHHHH----------HHHHHHHHHHHHHHHhHh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            998999999999999999999988753          567777777777666655 666677777888888888888888


Q ss_pred             hhhhccCCCc-hhHHHHHHhH-HHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        410 ANVVDIGPNF-AGPILAFAQT-IHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       410 ~~~~~~~p~~-~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      .++.+. |++ ++++.++++. ...+|..++|.+.|++.|.     .++ ..|+..+++.+++.++
T Consensus       316 ~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~-----~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       316 RYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT-----LGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-HHHHHHHHHHHHHHHH
Confidence            888887 654 9999999874 5678999999999999999     665 6677777776655443

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.97  E-value=2.1e-29  Score=255.17  Aligned_cols=343  Identities=12%  Similarity=0.090  Sum_probs=251.4

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQGIASG  173 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G~g~g  173 (534)
                      ++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..++++++++.+++..+. .++++.+++.|++.|+|.|
T Consensus        30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g  109 (410)
T TIGR00885        30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG  109 (410)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence            669999999999999999999999999999999999999999999999999988854332 3579999999999999999


Q ss_pred             chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh--------------------------hcCCchhh
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA--------------------------HYGWRSVF  226 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~--------------------------~~gwr~~f  226 (534)
                      ...+....++.++.|+++|++.++ .+...++|..+++.+++.+..                          ..+||++|
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~f  189 (410)
T TIGR00885       110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPY  189 (410)
T ss_pred             HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999 557889999999999887742                          24699999


Q ss_pred             hhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q psy14136        227 YTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF  306 (534)
Q Consensus       227 ~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (534)
                      ++.+++.++..++.. +.+ .|+.++.  ++++              .+.....++++|+|+++...+..+++.......
T Consensus       190 l~~a~~~~~~~~~~~-~~~-~p~~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~  251 (410)
T TIGR00885       190 MIIGAVVLAVALLIM-LTK-MPALNHS--DAKQ--------------ISFSASLSRLARIRHYREGVIAQFFYVGVQIMC  251 (410)
T ss_pred             HHHHHHHHHHHHHHH-Hhc-CCCCCcc--cccc--------------ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence            998887776544433 222 2221110  0000              011123457889999998888888888888788


Q ss_pred             HhchhhhhHhhh-CCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        307 IIPGPRYMKTIL-GFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC  385 (534)
Q Consensus       307 ~~~~~~~l~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (534)
                      .++++.|.++.. +.+....+...+.......+++++++++.||+++|+.+          .++.++..+..++....+ 
T Consensus       252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l----------~i~~~~~~~~~ll~~~~~-  320 (410)
T TIGR00885       252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL----------MAYAIIGMALCLGSIFAG-  320 (410)
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcC-
Confidence            899999987632 33434445556666688899999999999999988753          344444445555544544 


Q ss_pred             chhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhccccccc-ChhhHHHHHHHHH
Q psy14136        386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDET-SLESWRQVFLIAG  464 (534)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~-~~~~~~~~f~~~~  464 (534)
                      +.. ....+.+.+++.+..+|..++...+..+++..++.+...+. .+|+.+.|.+.|.+.|..+. ..++++..|++-.
T Consensus       321 ~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~  398 (410)
T TIGR00885       321 GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL  398 (410)
T ss_pred             ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence            322 34555555667777778888888888887754434433333 39999999999999995100 0014677777654


Q ss_pred             HHHH
Q psy14136        465 AVGS  468 (534)
Q Consensus       465 ~~~~  468 (534)
                      .+.+
T Consensus       399 ~~~~  402 (410)
T TIGR00885       399 LCFA  402 (410)
T ss_pred             HHHH
Confidence            4443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.97  E-value=6.8e-30  Score=258.66  Aligned_cols=336  Identities=18%  Similarity=0.170  Sum_probs=239.8

Q ss_pred             CChhhHHHHHHH-----HHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
Q psy14136        100 WDTTTQGAILSS-----FYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYG--------ALIALRS  166 (534)
Q Consensus       100 ~s~~~~g~~~s~-----~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~--------~l~~~r~  166 (534)
                      .++.+.+.+.+.     ..++..+++++.|+++||+|||+++..+.++.+++.++++++  +++.        .+++.|+
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~  104 (394)
T TIGR00883        27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL--PSYATIGIWAPILLLLARL  104 (394)
T ss_pred             CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC--CChhhhHHHHHHHHHHHHH
Confidence            455666655543     334445789999999999999999999999999999887665  4543        5889999


Q ss_pred             HHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhh--------hhcCCchhhhhhchhhHHHH
Q psy14136        167 IQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLI--------AHYGWRSVFYTTGSLGAIWC  237 (534)
Q Consensus       167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~i~~~~~li~~  237 (534)
                      ++|++.+...+...+++.|++|+++|++..++ ..+..+|.++++.++..+.        +.++||+.|++.+++.++..
T Consensus       105 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  184 (394)
T TIGR00883       105 IQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL  184 (394)
T ss_pred             HHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999994 4678889999888776653        35789999988766655433


Q ss_pred             HHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHH--HHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136        238 VAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPP--AWAIGITTFGRIWVHYIFIIPGPRYMK  315 (534)
Q Consensus       238 i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~  315 (534)
                      . .....||+++..+   +++             ++++.+.+.++.+++++  ++...+..++..........+.|.|++
T Consensus       185 ~-~~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (394)
T TIGR00883       185 Y-LRRNLEETPVFEK---AQE-------------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLT  247 (394)
T ss_pred             H-HHHhcCCChhHHH---HHh-------------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3 2233344332111   000             00112334566666655  777777777777777888889999998


Q ss_pred             hhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHH-HHHhh-cCCchhHHHHH
Q psy14136        316 TILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLV-MLIGY-LGCNVALVLIT  393 (534)
Q Consensus       316 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~  393 (534)
                      +.+|.+..+.+.......++.+++.++.|++.||++||+.+         ...+.+.....+ ..... ...+.+.....
T Consensus       248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (394)
T TIGR00883       248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVL---------IIFTVLAALLAVPLLMALLDSGSFTLFFFL  318 (394)
T ss_pred             HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH---------HHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence            87899999999999999999999999999999999998753         112221211111 11112 12244444455


Q ss_pred             HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHH-hHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHHHHHHH
Q psy14136        394 WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFA-QTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIAGAVGS  468 (534)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~~~~~~  468 (534)
                      .++.+++.+...+.......|..|++ |+++.++. +....+|..++|.+.|.+.+.     .+ |...++....+.+
T Consensus       319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~-----~g~~~~~~~~~~~~~l  391 (394)
T TIGR00883       319 VLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM-----TGDWYAIGYYLAALAL  391 (394)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH-----cCcchhHHHHHHHHHH
Confidence            55566666677777888889998876 99999985 445567888999999999998     44 6666666554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.97  E-value=3.2e-29  Score=256.11  Aligned_cols=356  Identities=14%  Similarity=0.071  Sum_probs=237.7

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-HHHHH-----HHHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-QAAVL-----HYGALIALRSIQ  168 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-~a~~~-----~~~~l~~~r~l~  168 (534)
                      ++++|+|+.++|++.+.+.++..+++++.|+++||+|||++++++..+.+++..... +..++     .+...++++++.
T Consensus        38 ~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (420)
T PRK09528         38 HDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYL  117 (420)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            447999999999999999999999999999999999999999887766665443211 11111     111122334444


Q ss_pred             hhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        169 GIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      |.+.....+....+..+.  ++++++.++ .....++|..+++++++.+.+ .+|+.+|++.+++.++..++.++..+++
T Consensus       118 ~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~  194 (420)
T PRK09528        118 GFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDA  194 (420)
T ss_pred             hhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccc
Confidence            443333333333333222  345677778 557789999999999998876 4899999998888777666665554443


Q ss_pred             CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh---CCcccc
Q psy14136        248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL---GFSIQT  324 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~  324 (534)
                      +++.+. ++++.+        +  +++......++.+|+|.++.+.+..++....+.....+.|.|+.+.+   +.+..+
T Consensus       195 ~~~~~~-~~~~~~--------~--~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (420)
T PRK09528        195 PSTAKV-ANALGA--------N--ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRV  263 (420)
T ss_pred             cchhhh-ccchhc--------c--cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHH
Confidence            322110 000000        0  01111234556788888876666555555555555566777776643   455566


Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      .+.+.+...+...++.++.|++.||+++|+.+          ..+.++.++...+..+.+ +.+..+....+.+...+..
T Consensus       264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~----------~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~  332 (420)
T PRK09528        264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNAL----------LLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFL  332 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh----------HHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence            78888888889999999999999999998763          344455555555555554 5555554455555555444


Q ss_pred             ccccchhhhccCCCc-hhHHHHH-HhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        405 YAGAMANVVDIGPNF-AGPILAF-AQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       405 ~~~~~~~~~~~~p~~-~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      .+....+..+..|++ +++..+. .++...+|..++|.+.|++.|.     .||+..|.+.+++.++..++.++..++
T Consensus       333 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~~~~~~  405 (420)
T PRK09528        333 LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-----IGFQGTYLILGGIVLLFTLISVFTLSG  405 (420)
T ss_pred             HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-----hCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence            455556667767766 7777665 5777889999999999999998     789999999888877766665555443

>TIGR00896 CynX cyanate transporter

Probab=99.97  E-value=5.3e-29  Score=248.79  Aligned_cols=325  Identities=16%  Similarity=0.097  Sum_probs=245.5

Q ss_pred             cCCCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         87 LEKPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALR  165 (534)
Q Consensus        87 ~~~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r  165 (534)
                      ...|.+|. ++++|+|+++.|++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+++ .  .++++.+++.|
T Consensus        18 ~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~--~~~~~~l~~~~   94 (355)
T TIGR00896        18 SVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S--APGTALLFAGT   94 (355)
T ss_pred             cCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H--hccHHHHHHHH
Confidence            34577777 88999999999999999999999999999999999999999999999888887765 3  36888999999


Q ss_pred             HHHhhhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhh
Q psy14136        166 SIQGIASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWF  242 (534)
Q Consensus       166 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~  242 (534)
                      ++.|++.+...+....++.|++| ++|++++++ ..+.++|..+++.+++.+.++.  +||+.|.+.+++.++...   .
T Consensus        95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~  170 (355)
T TIGR00896        95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---A  170 (355)
T ss_pred             HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---H
Confidence            99999999888888899999996 689999994 4788899999999988887764  399998877655443322   2


Q ss_pred             hccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc
Q psy14136        243 LAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI  322 (534)
Q Consensus       243 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~  322 (534)
                      .+|+.+++++.    +.              +..+...++++|+|.++...+..++....++....|+|.|+++ .|.+.
T Consensus       171 ~~~~~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~  231 (355)
T TIGR00896       171 WIPQVRRRVAA----NQ--------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASA  231 (355)
T ss_pred             HhhhhccccCC----CC--------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence            23433221110    00              0011234567889998887777777777788888999999987 79999


Q ss_pred             ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhh
Q psy14136        323 QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLIT  402 (534)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (534)
                      .+.+.+.+...++.++++++.|++.||+++|+..         ..++.++..++.+.+.+...+...  ....+.+++.+
T Consensus       232 ~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~g~~~g  300 (355)
T TIGR00896       232 ATAGSLLALMQLAQAASALLIPALARRVKDQRGI---------VAVLAVLQLVGLCGLLFAPMHGLW--AWALVLGLGQG  300 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH---------HHHHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHhhh
Confidence            9999999999999999999999999999654321         234444444444444443322221  13345566666


Q ss_pred             hcccccchhhhccC-CCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        403 ASYAGAMANVVDIG-PNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       403 ~~~~~~~~~~~~~~-p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ...+.......+.. +++ ++...++.+...+++..++|.+.|++.|.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~  348 (355)
T TIGR00896       301 GAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI  348 (355)
T ss_pred             hHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66666555554433 333 78999999999999999999999999987

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.97  E-value=3.6e-28  Score=245.04  Aligned_cols=337  Identities=13%  Similarity=0.100  Sum_probs=248.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCe----ehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTK----TVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGI  170 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr----~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~  170 (534)
                      .+|+|.|..++|++.+++.++..++++++|+++||+|||    +.+.++..+..   +.. ...+++++.+++.|++.|+
T Consensus        31 l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~l~i~~~l~g~  106 (382)
T PRK11128         31 LKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA---VAF-WFGAHSFWLLFVAIGLFNL  106 (382)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH---HHH-HHhcccHHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999994    33322222221   111 2223679999999999999


Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      +.+...|...+++.++  +++|+++.+ .....++|.++||++++++.+++|||..|++.++..++..+ ..+..||.++
T Consensus       107 ~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~  183 (382)
T PRK11128        107 FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPTIMP  183 (382)
T ss_pred             HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCCCCC
Confidence            9999999988888887  456788888 55777899999999999999999999999887765444333 2333333211


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHh
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLT  329 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~  329 (534)
                      +.   + +++            +.++...++++++|+|++|...+..++..........+.|.|+++ .|.+..+.+.+.
T Consensus       184 ~~---~-~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~  246 (382)
T PRK11128        184 QG---E-SRQ------------QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLW  246 (382)
T ss_pred             cc---c-ccc------------ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHH
Confidence            10   0 000            001123467899999999988888777777777777888999976 799998999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc
Q psy14136        330 GAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM  409 (534)
Q Consensus       330 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (534)
                      +...++.++..++.+++.||+++++.+          ..+.++.++..+.+...+ +.+..++..++.+++.+...+...
T Consensus       247 ~~~~~~~~~~~~~~g~l~~r~~~~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~  315 (382)
T PRK11128        247 SLGVVAEVLIFAFSNRLFRRWSARDLL----------LLSAICGVVRWGLMGSTT-ALPWLIVIQILHCGTFTVCHLAAM  315 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHH----------HHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence            988899999999999999999988753          445555555555555554 556666666666777777667777


Q ss_pred             hhhhccCCCchhHHHHHHhHH-HHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHH
Q psy14136        410 ANVVDIGPNFAGPILAFAQTI-HMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYF  472 (534)
Q Consensus       410 ~~~~~~~p~~~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~  472 (534)
                      .+..+..++++++..++.+.. ..+|..+||.+.|.+.|.     .++ ..++..+++.+++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~-----~g~-~~~~~~~~~~~~~~~  373 (382)
T PRK11128        316 RYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH-----LGA-GVFWVMALVALPALF  373 (382)
T ss_pred             HHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccH-HHHHHHHHHHHHHHH
Confidence            777776666688889988744 566779999999999999     565 456666655554433

>KOG0569|consensus

Probab=99.97  E-value=2.5e-28  Score=243.48  Aligned_cols=370  Identities=16%  Similarity=0.138  Sum_probs=258.9

Q ss_pred             hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136        104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIASGLTWPAMYAL  182 (534)
Q Consensus       104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~  182 (534)
                      ..+.+.+++.+|.++|+++.|+++||+|||..+.++.++..++.++..++ ..+++..++++|++.|+..|........+
T Consensus        61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy  140 (485)
T KOG0569|consen   61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY  140 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            46788899999999999999999999999999999999988888876555 33579999999999999999999999999


Q ss_pred             HhcccCCCcchhhhhhh-hhhhhHHHhhhhHH--HHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc--cchh
Q psy14136        183 VGHWIPSNERSRFMSSF-QGFSFGIGLTYPLC--GFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR--ITRK  257 (534)
Q Consensus       183 i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~--~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~--~~~~  257 (534)
                      +.|..|++.||....+. .+..+|.+++..++  ..+.+...|++.+.+..+++++..+ .+.++||+|+..-.  .+++
T Consensus       141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~  219 (485)
T KOG0569|consen  141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEE  219 (485)
T ss_pred             HhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHH
Confidence            99999999999988755 68888888886665  3333556799999988887777555 45567999974211  1111


Q ss_pred             hhh-hhh-------------h--ccCccccCCCCCcccHHHhhcCHHHHH----H-HHHHHHHHHHHHHHHhchhhhhHh
Q psy14136        258 ELD-YIQ-------------E--NIEPTIVGSKGLKVPWVSILTSPPAWA----I-GITTFGRIWVHYIFIIPGPRYMKT  316 (534)
Q Consensus       258 ~~~-~~~-------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~l~~  316 (534)
                      |.+ .++             +  +..++++..++.+.++++++++|....    . .+....+..+......|...++++
T Consensus       220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~  299 (485)
T KOG0569|consen  220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT  299 (485)
T ss_pred             HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence            110 000             0  000111112235667889998865432    2 222233333455556666666666


Q ss_pred             hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc---CCc--hh---
Q psy14136        317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL---GCN--VA---  388 (534)
Q Consensus       317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~---  388 (534)
                       .|++..++.+.....++..++.++++.++.||+|||+++          +.+..+..+..+++...   ...  .|   
T Consensus       300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl----------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y  368 (485)
T KOG0569|consen  300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL----------LISLSLMAVALLLMSIALFLSNSFGSWLSY  368 (485)
T ss_pred             -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence             799999999999999999999999999999999999875          23333333222222111   101  11   


Q ss_pred             HHHHHHHHHHHHhh-hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHH
Q psy14136        389 LVLITWFVAVTLIT-ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAV  466 (534)
Q Consensus       389 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~  466 (534)
                      ..+...+......+ +..|..+-...|++|+. |..++++..++..+..++-...+..+.+.     .|-...+.+.+.+
T Consensus       369 ~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~-----~g~~~filF~i~~  443 (485)
T KOG0569|consen  369 LCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV-----IGPYVFILFVIPL  443 (485)
T ss_pred             HHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcchhhHHHHHHH
Confidence            12233333333333 44667788889999977 99999999999999999999999888888     4543334444444


Q ss_pred             HHHHHHHHHhhcCCccccCCCCCC
Q psy14136        467 GSCTYFFYQVLGTSEVQPWNQLKP  490 (534)
Q Consensus       467 ~~~~~~~~~~~~~~~~~~~~~~~~  490 (534)
                      .+..+.++..+||++.|+..|..+
T Consensus       444 ~~~~i~~~~~lPETkgr~~~eI~~  467 (485)
T KOG0569|consen  444 AIFLIYLYRYLPETKGRTPYEIIE  467 (485)
T ss_pred             HHHHHHHHHhCcccCCCCHHHHHH
Confidence            555556667779888877655443

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.96  E-value=5e-28  Score=248.66  Aligned_cols=351  Identities=20%  Similarity=0.224  Sum_probs=277.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhc
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA---VLHYGALIALRSIQGIASG  173 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~---~~~~~~l~~~r~l~G~g~g  173 (534)
                      ++.-|+..++++..+..+...+.++++|.++||++|||+++.+.++.++..++.++..   ..+.+.+++.-++.|++.+
T Consensus        39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a  118 (524)
T PF05977_consen   39 QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSA  118 (524)
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHH
Confidence            3445789999999999999999999999999999999999999988877665543321   2367889999999999999


Q ss_pred             chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      ...|+.++++.+..|+++...++++. ...++..++||.++|.+...+|-.+.|.+.++..++...+.... +..+++++
T Consensus       119 ~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~-~~~~~~~~  197 (524)
T PF05977_consen  119 FFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW-KPPPPPSS  197 (524)
T ss_pred             HHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccc
Confidence            99999999999999999999999966 67899999999999999999999999998877666654443333 32221111


Q ss_pred             ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136        253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP  332 (534)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~  332 (534)
                      .  ++|.  ..          +..+..++.+.++|.+....+..++.++....+...+|.+.++.+|.++...|++.+..
T Consensus       198 ~--~~e~--~~----------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~  263 (524)
T PF05977_consen  198 L--PRER--FF----------SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAF  263 (524)
T ss_pred             c--chhh--hh----------hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHH
Confidence            1  1110  00          11223556677778777666666666666666677789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      +++.+++.++.+++.+|+++++.+          ..+.++.+++++.+.+.+ +.+...+.+++.+++.........+..
T Consensus       264 gvGai~Gal~~~~l~~~~~~~~lv----------~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~~~~t~~  332 (524)
T PF05977_consen  264 GVGAILGALLLPRLRRRLSSRRLV----------LLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANSSLNTLV  332 (524)
T ss_pred             HHHHHHHHHHHHHhhcccCcchhh----------HHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998888876653          455566666677777766 666667777777777777777778888


Q ss_pred             hccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        413 VDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       413 ~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      ++..|++ ||+++++++++...+..+|..+.|.+.+.     .|.+..+.+.+++.+++.++....+
T Consensus       333 Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~-----~g~~~al~~a~~~lll~~~~~~~~~  394 (524)
T PF05977_consen  333 QLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH-----FGVRTALLIAGAALLLSALIALRFP  394 (524)
T ss_pred             HHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8999988 99999999999999999999999999999     7888888888777766666655443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>KOG3764|consensus

Probab=99.96  E-value=2.8e-29  Score=235.93  Aligned_cols=349  Identities=18%  Similarity=0.130  Sum_probs=278.2

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      +.+.+-+.+++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|+.++...+++.  ++..+++.+++.|.+||+|.++
T Consensus        98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF--afg~sy~~l~vAR~LQgvgsA~  175 (464)
T KOG3764|consen   98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF--AFGNSYPMLFVARSLQGVGSAF  175 (464)
T ss_pred             ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH--HHcchhHHHHHHHHHhhhhHHH
Confidence            56777888999999999999999999999999999999999999999999999995  4447999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCc-chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        175 TWPAMYALVGHWIPSNE-RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~-r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      ...+..++++|.+|+++ |++++| +..+.++|..+||++||.+.+..|.+.+|++.++++++-..+.++.++++..+.+
T Consensus       176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~  255 (464)
T KOG3764|consen  176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD  255 (464)
T ss_pred             HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence            99999999999998764 799999 6689999999999999999999999999999999999988888777655433221


Q ss_pred             ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136        253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP  332 (534)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~  332 (534)
                                          ...+..++++++++|.++.........+......-..++.++.+....+..+.|+.+...
T Consensus       256 --------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~  315 (464)
T KOG3764|consen  256 --------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPA  315 (464)
T ss_pred             --------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccc
Confidence                                012234678899999999988888888888888888889988888886666899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccc---
Q psy14136        333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAM---  409 (534)
Q Consensus       333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  409 (534)
                      .+...++..+.|.+.||+++.+.+        ....+.++.++......+.+ ++..+++-.+..+++.+..-....   
T Consensus       316 ~~~y~ig~~lfg~la~k~~~~~wl--------~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~~dasl~P~l  386 (464)
T KOG3764|consen  316 SLSYAIGTNLFGKLADKYPHLRWL--------LSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGLADASLIPTL  386 (464)
T ss_pred             ccchhccCchHHHHHHhcCchhHH--------HHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence            999999999999999999965432        24555555555555555554 444444433434444443333322   


Q ss_pred             hhhhccCC-C---chhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        410 ANVVDIGP-N---FAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       410 ~~~~~~~p-~---~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+..|... +   -.|...++......+|.++||.++|.+.+.     .|+++...+.++..++-.-+...++.
T Consensus       387 ~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~-----iGF~wl~~iig~~n~iyapvl~ll~~  455 (464)
T KOG3764|consen  387 GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA-----IGFEWLMTIIGILNLIYAPVLLLLRI  455 (464)
T ss_pred             HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee-----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222211 1   268999999999999999999999999999     89999888888877766655555443

>KOG2504|consensus

Probab=99.96  E-value=9.2e-29  Score=252.85  Aligned_cols=397  Identities=18%  Similarity=0.233  Sum_probs=319.7

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      .|.|.+.+..+++.+..+-....+++..+.+                                                 
T Consensus        42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~-------------------------------------------------   72 (509)
T KOG2504|consen   42 GWGWVVVFASFLVNLSTDGLINSFGLLFEEL-------------------------------------------------   72 (509)
T ss_pred             CeeeeeeHhHHHHHHhhhcchheehhhHHHH-------------------------------------------------
Confidence            5788888888888888888888888666666                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGAL-IALRSIQGIA  171 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l-~~~r~l~G~g  171 (534)
                        +++++.+.++++|+.++......+.+|+.+.+.||+|.|.+.+.|.++.++|.++.+++.  +++.+ +..-++.|+|
T Consensus        73 --~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~--~i~~l~lt~gvi~G~G  148 (509)
T KOG2504|consen   73 --MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT--SLWQLYLTFGVIGGLG  148 (509)
T ss_pred             --HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHhhcc
Confidence              668999999999999999999999999999999999999999999999999999987774  66554 5578999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK  250 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~  250 (534)
                      .|+.+.....++..|| +|+|+.+.| ..++.++|.++-|++..++.+.+|||+.+++.+.+.+-..+......|..++.
T Consensus       149 ~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~  227 (509)
T KOG2504|consen  149 LGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPK  227 (509)
T ss_pred             chhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence            9999999999999988 789999999 55899999999999999999999999999999988877777766666644332


Q ss_pred             Ccccchhhhh-----------------------hhh------hccCccccCCC--CCccc----HHHhhcCHHHHHHHHH
Q psy14136        251 HPRITRKELD-----------------------YIQ------ENIEPTIVGSK--GLKVP----WVSILTSPPAWAIGIT  295 (534)
Q Consensus       251 ~~~~~~~~~~-----------------------~~~------~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~  295 (534)
                      .+. ..++.+                       ..+      ....+...+.+  ..+..    ..+++++|.++.+.+.
T Consensus       228 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~  306 (509)
T KOG2504|consen  228 KPN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALS  306 (509)
T ss_pred             Cch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHH
Confidence            211 000000                       000      00000000000  11111    2578999999999999


Q ss_pred             HHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q psy14136        296 TFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL  375 (534)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~  375 (534)
                      ..+...++.....++|.|..+ .|++..+++.+.++.++..++++++.|++.|+...++.        +...++.++.++
T Consensus       307 ~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~--------~~~~~~ll~~gl  377 (509)
T KOG2504|consen  307 NLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL--------VLFLLTLLIAGL  377 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH--------HHHHHHHHHHHH
Confidence            999999999999999999996 89999999999999999999999999999999874432        335566666666


Q ss_pred             HHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChh
Q psy14136        376 LVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLE  454 (534)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~  454 (534)
                      ..+...+.. +.+.++...++.++..+.........+.++.+ ++-..+.|+...+..++..+||.+.|++.|.  +  .
T Consensus       378 ~~~~~p~~~-~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~--t--g  452 (509)
T KOG2504|consen  378 ARLFLPFAT-TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDI--T--G  452 (509)
T ss_pred             HHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeec--c--C
Confidence            666666665 66777777777788888777777677777776 5599999999999999999999999999998  2  4


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        455 SWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       455 ~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      +|...|++.+++.+++..++++.+
T Consensus       453 ~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  453 NYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             CeeeehhhcChHHHHHHHHHHHhH
Confidence            599999999999999998887776

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.96  E-value=6.4e-28  Score=276.18  Aligned_cols=339  Identities=11%  Similarity=0.037  Sum_probs=248.7

Q ss_pred             hhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhh
Q psy14136        102 TTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQL---VTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPA  178 (534)
Q Consensus       102 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~---~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~  178 (534)
                      ....++..+++.++++++++++|+++||+|||+++.....   +..+..++ ++ ..++++.++++|+++|++.++..|+
T Consensus        51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~-~~-~~~s~~~l~~~~~l~gi~~a~~~p~  128 (1140)
T PRK06814         51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIY-GF-HLNSVPLLFAALFLMGIHSALFGPI  128 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHH-HH-HHhhHHHHHHHHHHHHHHHHhhchH
Confidence            3567889999999999999999999999999998643222   22222222 12 2268999999999999999999999


Q ss_pred             HHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchh
Q psy14136        179 MYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRK  257 (534)
Q Consensus       179 ~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~  257 (534)
                      ..+++.+++|+++|+++++ ..++.++|.++||++++++....+|++.|+..++..++. +++.+.+|+.+...+..+.+
T Consensus       129 ~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  207 (1140)
T PRK06814        129 KYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGNAAPDLKID  207 (1140)
T ss_pred             HHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCCeec
Confidence            9999999999999999999 557899999999999999999999999995544444443 33444455543322111100


Q ss_pred             hhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHH
Q psy14136        258 ELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSY  337 (534)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~  337 (534)
                      . ...           +.....++.+.++|.++...+..++.++....+..++|.|+++.+|.++...+++.+...++.+
T Consensus       208 ~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~  275 (1140)
T PRK06814        208 R-NII-----------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVA  275 (1140)
T ss_pred             c-chH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence            0 000           0011246778889999999888888888888888999999999899999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-------------------CCchhHHHHHHHHHH
Q psy14136        338 LSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-------------------GCNVALVLITWFVAV  398 (534)
Q Consensus       338 ~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~  398 (534)
                      ++.++.|++.+|..+++.+          ..+.++.+++.+.+.+.                   ..+.+..++..++.+
T Consensus       276 ig~~~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  345 (1140)
T PRK06814        276 VGSFLASKLSEGRITLLYV----------PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLA  345 (1140)
T ss_pred             HHHHHHHHHhCCceeeeee----------hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHH
Confidence            9999999999887766543          11222222222111111                   124455556666667


Q ss_pred             HHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHH
Q psy14136        399 TLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSC  469 (534)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~  469 (534)
                      ++.+...+...+.+++..|++ +|+++|+.+++..++..+++.+.|.+.+.  .  .++...+++.+++.++
T Consensus       346 ~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~--~--~~~~~~~~~~~~~~~~  413 (1140)
T PRK06814        346 AAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL--G--FSIPWIILFIALANLI  413 (1140)
T ss_pred             HHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh--c--cCHHHHHHHHHHHHHH
Confidence            777777777888888888876 99999999999999999999999998754  1  4566666555544333

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.96  E-value=2.1e-27  Score=241.18  Aligned_cols=348  Identities=13%  Similarity=0.059  Sum_probs=241.8

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-----CCee-hhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-----GTKT-VFGFSQLVTAICSLLIPQAA-VLHYGALIALRSIQG  169 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~-~l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l~G  169 (534)
                      +.|+|.+++|++..+...  .+.++++|+++||+     |||| .+.++.++.+++..++.+.. ..+++.+++..++.+
T Consensus        28 ~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~  105 (402)
T PRK11902         28 VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVA  105 (402)
T ss_pred             HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence            569999999999777765  58999999999999     8876 78888888887777755542 135777888888889


Q ss_pred             hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      +..+...++..+++.|++|+++|+++.++. .+.++|.++++.+++.+.+. +|||..|++.+++.++..+. .+..||+
T Consensus       106 ~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~  184 (402)
T PRK11902        106 FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEP  184 (402)
T ss_pred             HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCC
Confidence            999999999999999999999999999954 78899999999999998885 59999999988877665443 3455654


Q ss_pred             CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchh
Q psy14136        248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL  327 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~  327 (534)
                      ++.+++. ++..              ++.+..+++++|+|.++...+..++..........+.+.++.+.+|+++.+.++
T Consensus       185 ~~~~~~~-~~~~--------------~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~  249 (402)
T PRK11902        185 EVPARPP-RSLG--------------EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGI  249 (402)
T ss_pred             ccccccc-chhH--------------HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            3321110 0000              011235678899998887777666665544433344555666668999999998


Q ss_pred             HhhhHH-HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH---HHHHHHhhcCCchhHHHHHHHH----HHH
Q psy14136        328 LTGAPF-LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPA---LLVMLIGYLGCNVALVLITWFV----AVT  399 (534)
Q Consensus       328 ~~~~~~-~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~  399 (534)
                      +....+ ++.+++.++.+++.||+++|+.+          .++..+..   +.+......+.+.+.......+    .+.
T Consensus       250 ~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l----------~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~  319 (402)
T PRK11902        250 VNKTLGLAATIVGALAGGTLMVRLGLYRSL----------MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGM  319 (402)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHhHHHHH----------HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence            876554 46889999999999999987653          22222222   2222223333233433333332    223


Q ss_pred             HhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        400 LITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       400 ~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      ..+........++.+..|   ++..++.+....++..+++.+.|.+.|.     .||+..|.+.+++.++++++....++
T Consensus       320 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~-----~G~~~~f~~~~~~~~~~~~~~~~~~~  391 (402)
T PRK11902        320 GTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVEA-----YGWPGFYLMTVVIALPGLALLWLMRG  391 (402)
T ss_pred             HHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHHhh
Confidence            333334444445554444   4445666666677777677789999999     89999999988888777666554444


Q ss_pred             C
Q psy14136        480 S  480 (534)
Q Consensus       480 ~  480 (534)
                      +
T Consensus       392 ~  392 (402)
T PRK11902        392 T  392 (402)
T ss_pred             h
Confidence            3

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.96  E-value=2.8e-27  Score=239.89  Aligned_cols=351  Identities=13%  Similarity=0.066  Sum_probs=246.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ-AA-----VLHYGALIALRSIQ  168 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-a~-----~~~~~~l~~~r~l~  168 (534)
                      ++++|.++.+.|++.+++.++..+++++.|+++||+|||+.++.+++..+++...... ..     ...+..+++.|++.
T Consensus        30 ~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (396)
T TIGR00882        30 HDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYL  109 (396)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999999887776654433211 11     11234456778999


Q ss_pred             hhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        169 GIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      |++.+...+....++.+..  +++++..+ .....++|.++++++++.+.+ .+||.+|++.+++.++..++.+...|++
T Consensus       110 g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~  186 (396)
T TIGR00882       110 GFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA  186 (396)
T ss_pred             HHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            9998888888888877754  33455667 446778999999999988765 5999999999888887766655544443


Q ss_pred             CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh---CCcccc
Q psy14136        248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL---GFSIQT  324 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~  324 (534)
                      |+++.      .+...+   .+  ++++...+.++++|+|.++...+..++....+.....+.+.|+++.+   +.+...
T Consensus       187 ~~~~~------~~~~~~---~~--~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~  255 (396)
T TIGR00882       187 PSSAT------VANALG---AN--ASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRV  255 (396)
T ss_pred             chhhh------hhcccc---cc--cCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHH
Confidence            32111      000000   00  11122335788899999887777766666666666667888887754   445556


Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      .+.+.+...+...++.+..+++.||+++|+.+          .++.++.++........+ +.+......++.+.+....
T Consensus       256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l----------~~~~~l~~l~~~~~~~~~-~~~~~~~~~~l~g~~~~~~  324 (396)
T TIGR00882       256 FGYVTTMGELLNALIMFCAPLIINRIGAKNAL----------LIAGTIMSVRIIGSSFAT-TALEVVILKMLHAFEVPFL  324 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhH----------HHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHH
Confidence            78888888889999999999999999998763          444445555444444444 4554444444444444333


Q ss_pred             ccccchhhhccCCCc-hhHHHHH-HhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        405 YAGAMANVVDIGPNF-AGPILAF-AQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       405 ~~~~~~~~~~~~p~~-~g~~~g~-~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                      ......+..+..|++ ++++.+. .+....+|+.+++.+.|++.|.     .||+.+|++.+++.++..+...
T Consensus       325 ~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-----~G~~~~f~~~~~~~~i~~~~~~  392 (396)
T TIGR00882       325 LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-----IGFQGAYLVLGCIVLLFTLISV  392 (396)
T ss_pred             HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-----cccHHHHHHHHHHHHHHHHHHH
Confidence            333334455555555 7776665 5778899999999999999998     7899999998888777665543

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.96  E-value=3.6e-27  Score=220.20  Aligned_cols=342  Identities=15%  Similarity=0.153  Sum_probs=277.7

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++|+|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++.++|.++-...   +...++.+-.+.|.|.+.
T Consensus        39 r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~---~~~~L~~gt~l~G~gIav  115 (395)
T COG2807          39 RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG---GLPLLFLGTLLAGAGIAV  115 (395)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHhhHHH
Confidence            78999999999999999999999999999999999999999999999999999996544   678899999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      .....++++.+.+| |+-+..+++| ...++|..+++.+...+.++. |||....+.+.++++.++.++   |...+.+ 
T Consensus       116 ~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~r~~-  190 (395)
T COG2807         116 INVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQALREQ-  190 (395)
T ss_pred             HHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhccccc-
Confidence            99999999999995 5678889988 578899999999988888886 799999999988888766554   3321110 


Q ss_pred             ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136        253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP  332 (534)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~  332 (534)
                      ..  .               .+.+..+-..++|+|..|.+.+...++++.+|....|+|.++.| .|+|..++|.+.+..
T Consensus       191 ~~--~---------------~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~  252 (395)
T COG2807         191 AA--S---------------IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLM  252 (395)
T ss_pred             cc--c---------------cccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHH
Confidence            00  0               01112233458999999999999999999999999999999999 799999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      .+..++.++....+.+|.+.++.+         ......+..++++.+.+.+.+..+..  .++.+++.+..++.....+
T Consensus       253 ~l~~~~~~ll~P~la~R~~n~r~~---------~~~~~~~~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F~laL~li  321 (395)
T COG2807         253 QLAQLPTALLIPLLARRSKNQRPL---------VVLALLLMLVGLVGLLLAPGQLPILW--ALLLGLGQGGAFPLALTLI  321 (395)
T ss_pred             HHHHHHHHHHHHHHHHHhcccchH---------HHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHhCccchHHHHHHHHH
Confidence            999999999999999996665543         33444444455554445543333333  4667777888888888887


Q ss_pred             hccCC--CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        413 VDIGP--NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       413 ~~~~p--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .+..+  +..+.-+|+.+.++++-+.+||.+.|++.|.  +  ++|...++..+.+.+...+.-+..
T Consensus       322 ~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa--~--gsw~~~~~~l~~~~i~m~i~Gl~a  384 (395)
T COG2807         322 LLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDA--T--GSWSAPLVLLALATLLMLIFGLRA  384 (395)
T ss_pred             HhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHh--c--CChHHHHHHHHHHHHHHHHHHhhc
Confidence            76554  4489999999999999999999999999998  3  689888888877766666555444

>TIGR00889 2A0110 nucleoside transporter

Probab=99.96  E-value=2.8e-27  Score=240.61  Aligned_cols=351  Identities=12%  Similarity=0.087  Sum_probs=245.9

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCC-eehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGT-KTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      ++++|++.+++|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+..+.  ++++.+++.|++.|++.+
T Consensus        30 ~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~  107 (418)
T TIGR00889        30 SKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV--TTPAGMFPVLLANSLAYM  107 (418)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999965 778888888888877775544  578999999999999988


Q ss_pred             chhhhHHHHHhccc--------CCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhcc
Q psy14136        174 LTWPAMYALVGHWI--------PSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF  245 (534)
Q Consensus       174 ~~~~~~~~~i~~~~--------~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~  245 (534)
                      ...+...++..++.        ....|.+..|     .+|.++++.+++.+.....|+ +|++.+++.++..++ .+.+|
T Consensus       108 ~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G-----~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~  180 (418)
T TIGR00889       108 PTIALTNSISYANLPQAGLDVVTDFPPIRVMG-----TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLP  180 (418)
T ss_pred             cHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh-----hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCC
Confidence            88887776654332        2223333333     478888888888774333354 465666666665544 44567


Q ss_pred             CCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcc---
Q psy14136        246 DAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSI---  322 (534)
Q Consensus       246 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~---  322 (534)
                      |+|+.+++.+.+. +             +....+.++++|+|+++.+.+..++..........+.+.|+++ .|.++   
T Consensus       181 e~~~~~~~~~~~~-~-------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~  245 (418)
T TIGR00889       181 DIPVAKSTAKMSI-K-------------VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFA  245 (418)
T ss_pred             CCCCCccccccCH-H-------------HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hccccccc
Confidence            6643221110000 0             0011234568888988887777777766666666778888876 56543   


Q ss_pred             -----ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc---hhHHHHHH
Q psy14136        323 -----QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN---VALVLITW  394 (534)
Q Consensus       323 -----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  394 (534)
                           ...+...+...+..+++.+..|++.||+++|+.+          .++.++.++....+.....+   .+..++..
T Consensus       246 ~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l----------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~  315 (418)
T TIGR00889       246 DSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVM----------LLSLVAWALRFGFFAYGDPEYFGYALLFLSM  315 (418)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHH
Confidence                 5568888888999999999999999999998763          45555555554444443212   22334445


Q ss_pred             HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHh-HHHHhhhhHHhHhhhhccccccc-ChhhHHHHHHHHHHHHHHHH
Q psy14136        395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQ-TIHMTASFLSPMVAGYFLQDDET-SLESWRQVFLIAGAVGSCTY  471 (534)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~-~~~~~g~~i~~~~~g~l~~~~~~-~~~~~~~~f~~~~~~~~~~~  471 (534)
                      ++.+.+.+...+....++.+..|++ |++++|+.+ ....+|..+||.+.|.+.|..+. +..+|+..|++.+++.+++.
T Consensus       316 ~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~  395 (418)
T TIGR00889       316 IVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILA  395 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence            5555666666666677888888866 999999997 56789999999999999987211 00369999998888777766


Q ss_pred             HHHHhhcC
Q psy14136        472 FFYQVLGT  479 (534)
Q Consensus       472 ~~~~~~~~  479 (534)
                      ++..++.+
T Consensus       396 ~l~~~~~~  403 (418)
T TIGR00889       396 VLFMIFFK  403 (418)
T ss_pred             HHHHHHhC
Confidence            66655543

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.96  E-value=3.6e-27  Score=270.93  Aligned_cols=343  Identities=17%  Similarity=0.117  Sum_probs=251.9

Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhcchhhhH
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIASGLTWPAM  179 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~g~~~~~~  179 (534)
                      +....+++.+++.+++.++++++|+++||+|||++++++.++.+++.+++.++ ..++++.++++|+++|++.+...++.
T Consensus        45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~  124 (1146)
T PRK08633         45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK  124 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence            34568999999999999999999999999999999999988777666654333 23579999999999999999999999


Q ss_pred             HHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh--------c-CCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        180 YALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH--------Y-GWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       180 ~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~--------~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      .+++.|++|+++|++++++. .+.++|.++|+++++++.+.        + +|++.+.+..+...+..++..+.+|+.|+
T Consensus       125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (1146)
T PRK08633        125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA  204 (1146)
T ss_pred             HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence            99999999999999999954 78899999999999999876        2 34444444443333333344445566554


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccc-cchhH
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQ-TNGLL  328 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~-~~~~~  328 (534)
                      ......+++..          ...+.....++.++++|.++...+..++.......+..++|.|+++.+|++.. ..+++
T Consensus       205 ~~~~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~  274 (1146)
T PRK08633        205 AAPEVFDKKKY----------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYL  274 (1146)
T ss_pred             CCccccccccc----------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHH
Confidence            32211100000          00011123466788889888887777777777777888999999998999988 89999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccccc
Q psy14136        329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGA  408 (534)
Q Consensus       329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (534)
                      .+...++.+++.++.+++.||+++++.+          .++.++.+++++.+.+.. +.+..++..++.+++.+...+..
T Consensus       275 ~~~~~ig~~~g~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~  343 (1146)
T PRK08633        275 LAASAIGIGIGSLLAGRLSGRHIELGLV----------PLGALGLALSLFLLPTAP-SLASVLVLFFLFGFSAGLFIVPL  343 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceEccch----------hHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHH
Confidence            9999999999999999999999887653          344444444455544444 55555566666667777777777


Q ss_pred             chhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHH
Q psy14136        409 MANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGS  468 (534)
Q Consensus       409 ~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~  468 (534)
                      .+++.+..|++ ||+++|+.+++..+|..+++.+.+.+...  .  .++...+++.+.+.+
T Consensus       344 ~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~--~--~~~~~~~~~~~~~~~  400 (1146)
T PRK08633        344 NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGL--G--LSPAGLFYLIALVTL  400 (1146)
T ss_pred             HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHh--c--cCHHHHHHHHHHHHH
Confidence            78888888766 99999999999999998888777655432  0  344455555544433

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.95  E-value=2.9e-26  Score=236.38  Aligned_cols=370  Identities=11%  Similarity=0.048  Sum_probs=259.8

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      ++|++..+.|++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++  ++++.++++|++.|+|.|..
T Consensus        42 ~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~--~~~~~~~~~~~l~g~g~g~~  119 (475)
T TIGR00924        42 GLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS--IYPDLIFYGLGTIAVGSGLF  119 (475)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc--ccHhHHHHHHHHHHhccccc
Confidence            389999999999999999999999999999999 899999999999999999886554  57788889999999999999


Q ss_pred             hhhHHHHHhcccCCCc---chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhcc---CCC
Q psy14136        176 WPAMYALVGHWIPSNE---RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAF---DAP  248 (534)
Q Consensus       176 ~~~~~~~i~~~~~~~~---r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~---~~p  248 (534)
                      .+...++++|++|+++   |+++.+ .+.+.++|.++|+++++++.+++|||+.|++.++..++..+..++..+   +.|
T Consensus       120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~  199 (475)
T TIGR00924       120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIG  199 (475)
T ss_pred             cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCC
Confidence            9999999999998764   888889 568999999999999999999999999999987655544333332221   222


Q ss_pred             CCCcccchhhhhhhhhc----------------cCcccc------------------CCCCCcccHHHhhcCHHHHHHHH
Q psy14136        249 LKHPRITRKELDYIQEN----------------IEPTIV------------------GSKGLKVPWVSILTSPPAWAIGI  294 (534)
Q Consensus       249 ~~~~~~~~~~~~~~~~~----------------~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~  294 (534)
                      ++.+..++++.+.....                ..+...                  ...++.....+..|...+..+.+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  279 (475)
T TIGR00924       200 SVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFL  279 (475)
T ss_pred             CCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHH
Confidence            11111111111100000                000000                  00000011111122233444555


Q ss_pred             HHHHHHHHHHHHHhchhhhhHhhhCCcccc----chhHhhhHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHHHHHHHHH
Q psy14136        295 TTFGRIWVHYIFIIPGPRYMKTILGFSIQT----NGLLTGAPFLCSYLSSVLFCYLADQLFVRNI-MSLTNIRKVFTAIS  369 (534)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-l~~~~~~~~~~~~~  369 (534)
                      ...+....+....+.++.+.++..+.+...    .+++.+...+..++..++..++..|++||.. ....  .+  ..++
T Consensus       280 ~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~--~k--~~~G  355 (475)
T TIGR00924       280 EAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTP--LK--FTLG  355 (475)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcH--HH--HHHH
Confidence            555566666666677787777654443222    6678888888888888777776667766421 1100  11  2566


Q ss_pred             HHHHHHHHHHHhh--------cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136        370 QVIPALLVMLIGY--------LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM  440 (534)
Q Consensus       370 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~  440 (534)
                      +++.++++..+..        ...+.++.+...++.+.+.....|.......+..|++ ||+.+|+......+|..+++.
T Consensus       356 ~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~  435 (475)
T TIGR00924       356 MLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGY  435 (475)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666666555543        1337788888888899999999999999999999987 999999999999999999999


Q ss_pred             hhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +.....+.     .++...|...++++++..++.++.
T Consensus       436 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  467 (475)
T TIGR00924       436 LATFGAVP-----QGVTGVFGKIGLVTLLVGVVMALM  467 (475)
T ss_pred             HHHHHhcc-----cchhhHHHHHHHHHHHHHHHHHHH
Confidence            88877666     567777777776666655555444

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.95  E-value=1.1e-27  Score=253.70  Aligned_cols=282  Identities=15%  Similarity=0.250  Sum_probs=222.7

Q ss_pred             HHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCCCCCccccC
Q psy14136         21 MSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNVNEEGEFDW  100 (534)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~  100 (534)
                      ..++.++...+.+..++.+++.+                                                   +++|++
T Consensus        37 ~~~~~~~~~~~~~g~~~~~l~~i---------------------------------------------------ek~F~l   65 (633)
T TIGR00805        37 LLTCAQLQGLLYNGLVNSSLTTI---------------------------------------------------ERRFKL   65 (633)
T ss_pred             HHHHHHHHHHHHHHHHHhhchhh---------------------------------------------------hhhhCC
Confidence            34557788888899999888888                                                   669999


Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--------------------------
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--------------------------  154 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--------------------------  154 (534)
                      +..+.|++.+.+.++++++.++.|+++||+|||+++.+++++++++++++++..                          
T Consensus        66 ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c  145 (633)
T TIGR00805        66 STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLC  145 (633)
T ss_pred             CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccc
Confidence            999999999999999999999999999999999999999999999999976542                          


Q ss_pred             -----------------------HHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhh
Q psy14136        155 -----------------------VLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTY  210 (534)
Q Consensus       155 -----------------------~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~  210 (534)
                                             ...+..++++|+++|+|.+..++...+++.|++|+++|+++++ .+.+..+|.++|+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~  225 (633)
T TIGR00805       146 MENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGY  225 (633)
T ss_pred             cCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHH
Confidence                                   0025678899999999999999999999999999999999999 5578899999999


Q ss_pred             hHHHHhhhhc----------------------CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccch--hhhhhhhhcc
Q psy14136        211 PLCGFLIAHY----------------------GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITR--KELDYIQENI  266 (534)
Q Consensus       211 ~l~~~l~~~~----------------------gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~--~~~~~~~~~~  266 (534)
                      ++++++.+.+                      +||..|++.+++.++..+..+++.++.|+...+.+.  ++.+...+..
T Consensus       226 llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~  305 (633)
T TIGR00805       226 LLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSE  305 (633)
T ss_pred             HHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccc
Confidence            9999988643                      277788888888887766555444444432211111  1100000000


Q ss_pred             Ccccc----CCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHH-HHHHHHH
Q psy14136        267 EPTIV----GSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFL-CSYLSSV  341 (534)
Q Consensus       267 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~-~~~~~~~  341 (534)
                      .+...    ..++....+++++++|.++...+..++.....+++.+|+|.|+++.+|+++.+++++..+..+ +.+++.+
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~  385 (633)
T TIGR00805       306 DKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYL  385 (633)
T ss_pred             cccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHh
Confidence            00000    001112346789999999999999999999999999999999999999999999999887776 6689999


Q ss_pred             HHHHHHHHHhhh
Q psy14136        342 LFCYLADQLFVR  353 (534)
Q Consensus       342 ~~g~l~dr~~~~  353 (534)
                      ++|+++||++.+
T Consensus       386 l~G~l~~r~~~~  397 (633)
T TIGR00805       386 IGGFIMKKFKLN  397 (633)
T ss_pred             hhhheeeeeccc
Confidence            999999999854

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.8e-26  Score=218.92  Aligned_cols=342  Identities=14%  Similarity=0.094  Sum_probs=268.4

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-QAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      ++.|+++..|.+++..+++.++.+++++.|++.+|+|+|+.++.|+.++++++.+.. .+...+|..++++-|+.|.|.+
T Consensus        40 ~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~  119 (422)
T COG0738          40 KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIG  119 (422)
T ss_pred             HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhH
Confidence            669999999999999999999999999999999999999999999999999998842 2344589999999999999999


Q ss_pred             chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh-------------------cCCchhhhhhchhh
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH-------------------YGWRSVFYTTGSLG  233 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~-------------------~gwr~~f~i~~~~~  233 (534)
                      ...++...+++...++++..+.+. .....++|..++|++++.+..+                   -.||++|...+...
T Consensus       120 ~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~l  199 (422)
T COG0738         120 LLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLL  199 (422)
T ss_pred             HHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            999999999999999988888888 5678999999999999988762                   24888998887766


Q ss_pred             HHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136        234 AIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY  313 (534)
Q Consensus       234 li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (534)
                      ++..+......  .|+.++.. +++              .++......+++++|+++...+..+++-........|++.|
T Consensus       200 vll~v~~~~~k--~p~~~~~~-~~~--------------~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y  262 (422)
T COG0738         200 VLLAVLILLSK--LPDLQVAA-PSL--------------GASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSY  262 (422)
T ss_pred             HHHHHHHHhcc--CCcCCccc-ccc--------------cccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            66555443322  12111100 000              01111156789999999999999999999999999999999


Q ss_pred             hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy14136        314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLIT  393 (534)
Q Consensus       314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (534)
                      +.+..|.+..+++...+...++.++|++++.++..|++..|.+          .+..++..+.++...+.+ + ...+..
T Consensus       263 ~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L----------af~a~~~ill~~~~~l~~-g-~v~~~~  330 (422)
T COG0738         263 LEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL----------AFYALIAILLLLAVALIG-G-VVALYA  330 (422)
T ss_pred             HHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHHHHhc-C-hHHHHH
Confidence            9998899999999999999999999999999999999888764          343434444444444554 3 445556


Q ss_pred             HHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHH
Q psy14136        394 WFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTY  471 (534)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~  471 (534)
                      ....+++.+..+|...+...+..|++...+.++ ..+.-+|+++-|.+.|++.|.     .+....+.....++.+-.
T Consensus       331 l~~ig~F~simfPTIfslal~~l~~~ts~~s~~-l~maivGGAiiP~l~G~i~d~-----~g~~~~~~~~pllc~lyV  402 (422)
T COG0738         331 LFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGL-LVMAIVGGAIIPPLQGVIADM-----FGIQLTFLIVPLLCYLYV  402 (422)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhccCcccccccee-eeeheecchHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHH
Confidence            666778888999999999998888665554444 344568999999999999999     666666554444443333

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.95  E-value=2.2e-26  Score=226.01  Aligned_cols=364  Identities=12%  Similarity=0.049  Sum_probs=244.9

Q ss_pred             CccccCChhh-HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         95 EGEFDWDTTT-QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        95 ~~~~~~s~~~-~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      .+|+|+|++| .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++.+++.+++  +++..+.+.|++.|++.|
T Consensus        53 ~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa--~Sl~~L~i~R~llGvaEA  130 (511)
T TIGR00806        53 LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG--TSVWHMQLMEVFYSVTMA  130 (511)
T ss_pred             HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence            4599999999 9999999999999999999999999999999999999999999998776  589999999999999999


Q ss_pred             chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhh--chhhHHHHHHhhhhccCCCCC
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTT--GSLGAIWCVAWWFLAFDAPLK  250 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~--~~~~li~~i~~~~~~~~~p~~  250 (534)
                      ... +...++..|+|+++|+++.+ ..++..+|.+++++++++ ...+|||+.+.+.  ...+.+..+++-+++|..++.
T Consensus       131 ~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~s  208 (511)
T TIGR00806       131 ARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRS  208 (511)
T ss_pred             HHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchh
Confidence            999 99999999999999999999 558999999999999999 5568999865443  222333344445566643331


Q ss_pred             Ccccchh--h---hhhhhhccCccc--cC--CC-C-------CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136        251 HPRITRK--E---LDYIQENIEPTI--VG--SK-G-------LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY  313 (534)
Q Consensus       251 ~~~~~~~--~---~~~~~~~~~~~~--~~--~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (534)
                      .-..+++  +   ..+.+.....+.  ..  .+ .       -...++...++|.+....+=+.+...+++.+.+|.-..
T Consensus       209 l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~L  288 (511)
T TIGR00806       209 LFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTL  288 (511)
T ss_pred             hhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHH
Confidence            1000000  0   000000000000  00  00 0       01122344567776666666666666677776666655


Q ss_pred             hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy14136        314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLIT  393 (534)
Q Consensus       314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (534)
                      -.+..+-.....|..-++..+.+.+..+..|++-.++.+.        -...+.+..++.+..++++...+ +.+..++.
T Consensus       289 W~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~--------~~l~l~v~s~~~~gll~~m~~t~-~Iw~~Y~~  359 (511)
T TIGR00806       289 WGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW--------SKLLIAVVSAIQAGLVFWMSQSH-DIWVLYVT  359 (511)
T ss_pred             HHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh--------HHHHHHHHHHHHHHHhhhhhccc-chHHHHHH
Confidence            5553332223567777777888888888888885544221        12234555556666677777766 88888888


Q ss_pred             HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh----hhcccccccChhhHHHHHHHHHHHHH
Q psy14136        394 WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA----GYFLQDDETSLESWRQVFLIAGAVGS  468 (534)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~----g~l~~~~~~~~~~~~~~f~~~~~~~~  468 (534)
                      .++......+..+....-+.....++ -|..+|+.+++.-+-..+-..+.    |.-.+. .+...-|...|.+.+++.+
T Consensus       360 yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i-~~Qf~vY~~yf~~~~~i~~  438 (511)
T TIGR00806       360 YVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQV-RKQFRIYSVYFLVLSIICF  438 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCc-eeEEEehhhHHHHHHHHHH
Confidence            88888888777777666666555544 79999998888776666655443    221111 0111234445666665555


Q ss_pred             HHHH
Q psy14136        469 CTYF  472 (534)
Q Consensus       469 ~~~~  472 (534)
                      +..+
T Consensus       439 ~~~~  442 (511)
T TIGR00806       439 FGAG  442 (511)
T ss_pred             HHHH
Confidence            5444

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.95  E-value=1e-25  Score=232.29  Aligned_cols=379  Identities=11%  Similarity=0.068  Sum_probs=246.8

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVLH-YGALIALRSIQGIAS  172 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~~-~~~l~~~r~l~G~g~  172 (534)
                      ++++|++.++.+++.+.+.....+..+++|+++|| +||||+++++.+++++++++++++.  + ...++++|+++|+|.
T Consensus        42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~--~~~~ll~~~~~l~~ig~  119 (489)
T PRK10207         42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL--LKPDLIFIALGTIAVGN  119 (489)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHhcc
Confidence            44789999999999999998999999999999999 9999999999999999999987653  3 334558999999999


Q ss_pred             cchhhhHHHHHhcccCCCc--chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        173 GLTWPAMYALVGHWIPSNE--RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~--r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      |...|...+++.|++|+++  |.++++ .+.+.++|..+||.+++++.+++|||+.|++.++ +++..++.+...++..+
T Consensus       120 g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~  198 (489)
T PRK10207        120 GLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVK  198 (489)
T ss_pred             ccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhc
Confidence            9999999999999998874  577788 5689999999999999999999999999998654 34434444433332221


Q ss_pred             CC---cccchhh-hhhhh------------hccCccccCCC---------------CCcccHHHhhcCHHHHHHHHH--H
Q psy14136        250 KH---PRITRKE-LDYIQ------------ENIEPTIVGSK---------------GLKVPWVSILTSPPAWAIGIT--T  296 (534)
Q Consensus       250 ~~---~~~~~~~-~~~~~------------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~--~  296 (534)
                      +.   ++.++.+ .....            ...........               .......+.+|+|.+....+.  .
T Consensus       199 ~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~  278 (489)
T PRK10207        199 DIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEA  278 (489)
T ss_pred             ccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            11   0000000 00000            00000000000               000000145566655443322  3


Q ss_pred             HHHHHHHHHHHhchhhhhHhhhCCcc----ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q psy14136        297 FGRIWVHYIFIIPGPRYMKTILGFSI----QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI  372 (534)
Q Consensus       297 ~~~~~~~~~~~~~~~~~l~~~~g~s~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~  372 (534)
                      ......+....+.++.+.++..+.+.    .....+.+...+..++..++.+++.||+++|+.-.... .+  ..+++++
T Consensus       279 ~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~-~k--~~~G~~l  355 (489)
T PRK10207        279 VVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMP-MK--FTLGMFL  355 (489)
T ss_pred             HHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcH-HH--HHHHHHH
Confidence            33444455555677777775333221    12234445556677788888899999999886311000 11  2344444


Q ss_pred             HHHHHHHH-----hhc----CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136        373 PALLVMLI-----GYL----GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA  442 (534)
Q Consensus       373 ~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~  442 (534)
                      .+++++.+     ...    ..+.++.+...++.+.+.++..+.....+.+..|++ +|.++|+.+....+|+.++..+.
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~  435 (489)
T PRK10207        356 CSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA  435 (489)
T ss_pred             HHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44333221     111    124566777778888888899998899888888877 99999999999999999998887


Q ss_pred             hhcccccc--c---ChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        443 GYFLQDDE--T---SLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       443 g~l~~~~~--~---~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      ........  +   ....+...|...++..++..++.+...+
T Consensus       436 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~  477 (489)
T PRK10207        436 TFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP  477 (489)
T ss_pred             HHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65532100  0   0123667777777776666666555443

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.95  E-value=1.5e-25  Score=229.20  Aligned_cols=373  Identities=15%  Similarity=0.149  Sum_probs=260.5

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW  176 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~  176 (534)
                      |+|- .....|+.+.+.++.+++.++.|+++|.||||++++.+.++..+|+++++-+  +|...++++..+.|+|.|...
T Consensus        73 diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA--~~~~~~iag~~l~GvgaG~~~  149 (599)
T PF06609_consen   73 DIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA--QNMNTFIAGMVLYGVGAGVQE  149 (599)
T ss_pred             hcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC--CcHHHHHHHHHHHHHhhHHHH
Confidence            6664 3678899999999999999999999999999999999999999999997544  799999999999999977554


Q ss_pred             hhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC--cc
Q psy14136        177 PAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH--PR  253 (534)
Q Consensus       177 ~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~--~~  253 (534)
                       .....++|..|.|.|+...++. ...-+....++.++..+..+.+|||.|++.++...+.+++.+++..++++..  .+
T Consensus       150 -~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~  228 (599)
T PF06609_consen  150 -LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGR  228 (599)
T ss_pred             -HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccc
Confidence             5666799999999998777643 3333444567777777776779999999999887777666555544333211  11


Q ss_pred             -cc-hhhhhhhhh---------------------ccC-c-----------------------cccCCCCCcccHHHhhcC
Q psy14136        254 -IT-RKELDYIQE---------------------NIE-P-----------------------TIVGSKGLKVPWVSILTS  286 (534)
Q Consensus       254 -~~-~~~~~~~~~---------------------~~~-~-----------------------~~~~~~~~~~~~~~~~~~  286 (534)
                       .. .++.+++.-                     ... +                       +.....+++.-..+++|+
T Consensus       229 ~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~  308 (599)
T PF06609_consen  229 KLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKD  308 (599)
T ss_pred             cCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhcc
Confidence             11 111111100                     000 0                       000111233345678887


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccc---cchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHH
Q psy14136        287 -PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQ---TNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIR  362 (534)
Q Consensus       287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~  362 (534)
                       |.+...++..++....++....+.|+.....++-++.   ..++......++..++.++.|.+..+++|-|.       
T Consensus       309 ~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw-------  381 (599)
T PF06609_consen  309 RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW-------  381 (599)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH-------
Confidence             5566666677777777888888888888877777653   56788888889999999999999988876543       


Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136        363 KVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM  440 (534)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~  440 (534)
                        .++++.++..+++..+... +.+....+...++.+++.+..........+-..|++ -|++.|+...++.+|+.+|..
T Consensus       382 --~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~a  459 (599)
T PF06609_consen  382 --QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYA  459 (599)
T ss_pred             --HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHH
Confidence              3444544444433333322 224444455666667777766666666666666655 999999999999999999998


Q ss_pred             hhhhccccc--------------------------------c--------c-----------------ChhhHHHHHHHH
Q psy14136        441 VAGYFLQDD--------------------------------E--------T-----------------SLESWRQVFLIA  463 (534)
Q Consensus       441 ~~g~l~~~~--------------------------------~--------~-----------------~~~~~~~~f~~~  463 (534)
                      +...++..-                                +        +                 -..+|+.+|+..
T Consensus       460 Iy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~s  539 (599)
T PF06609_consen  460 IYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSS  539 (599)
T ss_pred             HHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            886665320                                0        0                 013578888888


Q ss_pred             HHHHHHHHHHHHhhcCCcc
Q psy14136        464 GAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~  482 (534)
                      ..+.++++++.++++..++
T Consensus       540 iaFG~vaiiaa~fl~d~~~  558 (599)
T PF06609_consen  540 IAFGVVAIIAALFLGDIDK  558 (599)
T ss_pred             HHHHHHHHHHHHHcCChHH
Confidence            8888888888888766543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR00901 2A0125 AmpG-related permease

Probab=99.95  E-value=1.7e-26  Score=230.73  Aligned_cols=310  Identities=13%  Similarity=0.068  Sum_probs=229.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhccc-----CCeeh-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-----GTKTV-FGFSQLVTAICSLLIPQAA-VLHYGALIALRSI  167 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grr~~-l~~~~~~~~i~~~l~~~a~-~~~~~~l~~~r~l  167 (534)
                      .+|+|+|.+++|++.+. .+...+ .+++|+++||+     ||||. ++.+.++.++..+.+++.. ..+++.+....++
T Consensus        15 ~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~   92 (356)
T TIGR00901        15 LRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFL   92 (356)
T ss_pred             HHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHH
Confidence            67899999999999766 555555 89999999998     89997 4667777777665654431 1356677788888


Q ss_pred             HhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcC--------CchhhhhhchhhHHHHH
Q psy14136        168 QGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYG--------WRSVFYTTGSLGAIWCV  238 (534)
Q Consensus       168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~i~~~~~li~~i  238 (534)
                      .+++.+...++..+++.|++|+|+|+++.++. .+..+|.++++.+++.+.+..|        ||.+|++.+++.++..+
T Consensus        93 ~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~  172 (356)
T TIGR00901        93 IAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLL  172 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999954 7889999999999999988888        99999999887777655


Q ss_pred             HhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHH---HHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136        239 AWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPP---AWAIGITTFGRIWVHYIFIIPGPRYMK  315 (534)
Q Consensus       239 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~  315 (534)
                      ..++..||+++..+. ++++.+              +.+..+++++++|.   ++...+..++.....+....+.|.|++
T Consensus       173 ~~~~~~~e~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  237 (356)
T TIGR00901       173 VTLFLAKEPQEDASV-PKPLTQ--------------AVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLL  237 (356)
T ss_pred             HHHHhccCCCccccc-chhHHH--------------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555455663322111 111100              01124566666664   777777777777888888899999999


Q ss_pred             hhhCCccccchhHhhhHH-HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc--C--------
Q psy14136        316 TILGFSIQTNGLLTGAPF-LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL--G--------  384 (534)
Q Consensus       316 ~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------  384 (534)
                      + +|++..+.+.+....+ +..+++.+++|++.||+++|+.+          ..+.++.++....+.+.  .        
T Consensus       238 ~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (356)
T TIGR00901       238 D-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL----------LLFGIVQALTNAGFVWLASNGHHDGITF  306 (356)
T ss_pred             H-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH----------HHHHHHHHHHHHHHHHHHhcCccccccc
Confidence            8 8999999888877665 57889999999999999988753          23333333333322221  1        


Q ss_pred             CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHH
Q psy14136        385 CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHM  432 (534)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~  432 (534)
                      .+.+......++.+++.+...+...++..+..|++ ||+.+|+.+...+
T Consensus       307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            13344555555667777888888899999998876 9999999887764

>KOG0252|consensus

Probab=99.95  E-value=1.3e-27  Score=228.65  Aligned_cols=421  Identities=13%  Similarity=0.087  Sum_probs=288.0

Q ss_pred             chHH-HHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136         13 PARV-VLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN   91 (534)
Q Consensus        13 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~   91 (534)
                      +|+. ....+.-.+++.+.+|...++.+.|-+..                =|-...                        
T Consensus        36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~----------------lY~~~~------------------------   75 (538)
T KOG0252|consen   36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGY----------------LYYHGD------------------------   75 (538)
T ss_pred             hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHH----------------HhcCCC------------------------
Confidence            4444 44444788999999999999987766522                111000                        


Q ss_pred             CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
Q psy14136         92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL-----HYGALIALRS  166 (534)
Q Consensus        92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~-----~~~~l~~~r~  166 (534)
                         .+.=+.++...+.+..+..+|.++||++.|+++||+|||+++...++++.++++++++....     -+.++.+.|+
T Consensus        76 ---~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~  152 (538)
T KOG0252|consen   76 ---ESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRF  152 (538)
T ss_pred             ---CCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHH
Confidence               11123556678899999999999999999999999999999999999999999987665322     2678999999


Q ss_pred             HHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh---------------cCCchhhhhhc
Q psy14136        167 IQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH---------------YGWRSVFYTTG  230 (534)
Q Consensus       167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~---------------~gwr~~f~i~~  230 (534)
                      +.|+|.|+-+|...++.+|...+++||...+ +++..++|.+.|.+++-.+..-               .=||..|.+.+
T Consensus       153 ~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~  232 (538)
T KOG0252|consen  153 LLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGA  232 (538)
T ss_pred             HhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 7777777777776665444321               12999998877


Q ss_pred             hhhHHHHHHhhhhccCCCCCCcccc-------hhhhhhhhhccCcccc---CCCCCccc---HHHhhcC---HHHHHHHH
Q psy14136        231 SLGAIWCVAWWFLAFDAPLKHPRIT-------RKELDYIQENIEPTIV---GSKGLKVP---WVSILTS---PPAWAIGI  294 (534)
Q Consensus       231 ~~~li~~i~~~~~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~---~~~~~~~~  294 (534)
                      +++++.. ...+.+||+++.....+       ++.++.+...+.++..   ..+.++..   +.+.+..   +++...+.
T Consensus       233 vpa~~~l-y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~  311 (538)
T KOG0252|consen  233 VPALLVL-YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAG  311 (538)
T ss_pred             HHHHHHH-HhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence            6666543 34455677654331100       0000111111111000   00111111   2222222   45667778


Q ss_pred             HHHHHHHHHHHHHhchhhhhHhhhCCccccchh--------HhhhH-HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136        295 TTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGL--------LTGAP-FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF  365 (534)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~--------~~~~~-~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~  365 (534)
                      .+++.-.+++....+...+++. .|+.+.+...        ...+. ....+++-.+...++|++||++.          
T Consensus       312 ~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i----------  380 (538)
T KOG0252|consen  312 TWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI----------  380 (538)
T ss_pred             HHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH----------
Confidence            8888888899988888888886 5776655444        11111 12233355566678999999876          


Q ss_pred             HHHHHHHHHHHHHHHhhcCC---chhHH-HHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136        366 TAISQVIPALLVMLIGYLGC---NVALV-LITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM  440 (534)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~  440 (534)
                      .+.++.+..+..+.+.....   +.... +...+...++..........+..|.+|.. |+++.|+..+.+..|++++..
T Consensus       381 q~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~  460 (538)
T KOG0252|consen  381 QLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF  460 (538)
T ss_pred             HHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence            36677777776666655432   11122 22223333444455556677888999987 999999999999999999999


Q ss_pred             hhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccccCCCC
Q psy14136        441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQL  488 (534)
Q Consensus       441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  488 (534)
                      ...++.++......+.+.+|++.+.+++++.+..++++++++++.++.
T Consensus       461 ~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei  508 (538)
T KOG0252|consen  461 GFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEI  508 (538)
T ss_pred             HhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHh
Confidence            999998832222278899999999999999999999998887776655

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.95  E-value=1e-26  Score=239.07  Aligned_cols=328  Identities=13%  Similarity=0.106  Sum_probs=239.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCee-hhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTKT-VFGFSQLVTAICSLLIPQAAV----LHYGALIALR  165 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~~l~~~a~~----~~~~~l~~~r  165 (534)
                      .+++|+++.++|++.++..+..++..|+.|+++||    +|||| .++.+....+++.+++.+...    ..+..+++.+
T Consensus        27 ~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  106 (437)
T TIGR00792        27 TDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITY  106 (437)
T ss_pred             HHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence            66899999999999999999999999999999998    67754 677788888887777533210    1256677788


Q ss_pred             HHHhhhhcchhhhHHHHHhccc-CCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-------hcCCchhhhhhchhhHHH
Q psy14136        166 SIQGIASGLTWPAMYALVGHWI-PSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-------HYGWRSVFYTTGSLGAIW  236 (534)
Q Consensus       166 ~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~i~~~~~li~  236 (534)
                      ++.+++.+...+...++..|.. ++++|++..++. .+..+|..+++.+.+.+..       ..+||+.+.+.++++++.
T Consensus       107 ~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~  186 (437)
T TIGR00792       107 ILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVS  186 (437)
T ss_pred             HHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHH
Confidence            9999998888888889999987 468899998854 5677777766665544442       458999999999888887


Q ss_pred             HHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHh
Q psy14136        237 CVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKT  316 (534)
Q Consensus       237 ~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  316 (534)
                      .+..++..||++++.+..   ++            ++.+....+++++++|.++...+..++..........+.+.|.+.
T Consensus       187 ~~~~~~~~~e~~~~~~~~---~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (437)
T TIGR00792       187 LIICFFGTKERYSEIPKN---IE------------KKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTY  251 (437)
T ss_pred             HHHHHcCCEecCCCCCcc---cc------------cCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEee
Confidence            777766777654221100   00            001122356778899999988888888777777766666777766


Q ss_pred             hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q psy14136        317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFV  396 (534)
Q Consensus       317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (534)
                      .++ +....+.+.....++.+++.++.+++.||+++|+.+          .++.++..+....+.+.+.+.+...+..++
T Consensus       252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (437)
T TIGR00792       252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF----------AGGILLMVLGYLIFFFAGSNLPLILVLIIL  320 (437)
T ss_pred             ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence            555 455666777777899999999999999999988653          344444444444443333244444555566


Q ss_pred             HHHHhhhcccccchhhhccCC--------CchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        397 AVTLITASYAGAMANVVDIGP--------NFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .+++.+...+...+...|..+        +.+|.++|+.+....+|..+++.+.|.+.+.
T Consensus       321 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~  380 (437)
T TIGR00792       321 AGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI  380 (437)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666677667777777766532        3389999999999999999999999998875

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG0254|consensus

Probab=99.94  E-value=5.2e-26  Score=237.54  Aligned_cols=368  Identities=14%  Similarity=0.138  Sum_probs=248.7

Q ss_pred             hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136        103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYAL  182 (534)
Q Consensus       103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~  182 (534)
                      ++.+|+.+.+.++.++++++.|+++|++|||+.++++.+++.+|.++++++  +|++.++++|+++|+|.|......+.+
T Consensus        89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a--~~~~~l~~GR~l~G~g~G~~~~~~piy  166 (513)
T KOG0254|consen   89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA--PSWYQLIVGRILTGLGVGGASVLAPVY  166 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHhccchhhhhhcchhh
Confidence            577999999999999999999999999999999999999999999997666  699999999999999999999999999


Q ss_pred             HhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccc-hhhh
Q psy14136        183 VGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRIT-RKEL  259 (534)
Q Consensus       183 i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~-~~~~  259 (534)
                      ++|..|++.||...+.. ....+|..++..++....+. ++||..+.+..+.+++..+. .+++||+|+..-+.. .++.
T Consensus       167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a  245 (513)
T KOG0254|consen  167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA  245 (513)
T ss_pred             HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence            99999999999999944 67778888885554444332 48999999998888887777 778899987432211 1111


Q ss_pred             hhhhhccCc------------------cccCCCCCcccHHHhhc----CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh
Q psy14136        260 DYIQENIEP------------------TIVGSKGLKVPWVSILT----SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI  317 (534)
Q Consensus       260 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  317 (534)
                      +.....+..                  .+......+..++++++    ++.++...+..+.+..+......|.+.+++. 
T Consensus       246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-  324 (513)
T KOG0254|consen  246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-  324 (513)
T ss_pred             HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence            111000000                  00000111112334333    2334455556666666667778888888776 


Q ss_pred             hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc----C-------Cc
Q psy14136        318 LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL----G-------CN  386 (534)
Q Consensus       318 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~  386 (534)
                      .|.+... .......++..+++.+++.++.||+|||+.+          +.+.....++.++++..    .       ..
T Consensus       325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll----------l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~  393 (513)
T KOG0254|consen  325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL----------LFGAAGMSICLVILAVVGVFALYYPNSSKGA  393 (513)
T ss_pred             cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHhHHHHHHHHHHHHHHHHHhccCCCcccch
Confidence            5665433 5556677888889999999999999999875          33333333333322211    1       01


Q ss_pred             hhHHHHH-HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHH
Q psy14136        387 VALVLIT-WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAG  464 (534)
Q Consensus       387 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~  464 (534)
                      .+..+.. ++....+.....+..+....|.+|.+ |+.+.++......+...+-......+.+.     .+....|...+
T Consensus       394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~-----~~~~~~f~~f~  468 (513)
T KOG0254|consen  394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA-----LGIGGTFGYFG  468 (513)
T ss_pred             hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccchHHHHH
Confidence            1222222 23333333455556677889999977 99999999999988887766665555554     22223333333


Q ss_pred             HHHHHHH--HHHHhhcCCccccCCCCCC
Q psy14136        465 AVGSCTY--FFYQVLGTSEVQPWNQLKP  490 (534)
Q Consensus       465 ~~~~~~~--~~~~~~~~~~~~~~~~~~~  490 (534)
                      .++.+..  .++++++|++.+..++.++
T Consensus       469 ~~~~~~~~~fv~~~~pETkg~sleei~~  496 (513)
T KOG0254|consen  469 GICLLSLIIFVFFFVPETKGLTLEEINE  496 (513)
T ss_pred             HHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence            3333333  3556668887776665443

>KOG0253|consensus

Probab=99.94  E-value=1.7e-25  Score=207.59  Aligned_cols=394  Identities=13%  Similarity=0.182  Sum_probs=281.4

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      +.+|.+......+.+-..+.....+.+.|..                                                 
T Consensus        74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l-------------------------------------------------  104 (528)
T KOG0253|consen   74 RFQWYLFFVAGMGWMADAMEMMLLSLILPAL-------------------------------------------------  104 (528)
T ss_pred             cchhhHHHHhhhHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence            4566677766777777777766666666666                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~  172 (534)
                        +..++.+..|..++......|..+++..+|.++|++|||+.+.+..+...+...+.+..  +|+..+++.|.+.|+|.
T Consensus       105 --~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~s--pnf~~L~~f~~l~~~g~  180 (528)
T KOG0253|consen  105 --DEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGAS--PNFASLCVFRALWGFGV  180 (528)
T ss_pred             --HhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCC--CCeehhhHHHHHHhccC
Confidence              55778899999999999999999999999999999999999999999999988886544  79999999999999999


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      |. .|...++-.|..|..+|...+-....+.+|.++...+.-.+..++||||.....+.+..+. ....+++||+|+..-
T Consensus       181 gg-~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~-a~f~~w~~ESpRf~~  258 (528)
T KOG0253|consen  181 GG-LPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFA-ARFLVWVYESPRFYL  258 (528)
T ss_pred             CC-ccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHH-HHHHhhcccCcchhh
Confidence            98 8999999999999999998888558899999999999988889999999888887555444 445567799987421


Q ss_pred             ccchhh-----hhhh------------------------hhccCccccC-CCCCcccHHHhhc---CHHHHHHHHHHHHH
Q psy14136        253 RITRKE-----LDYI------------------------QENIEPTIVG-SKGLKVPWVSILT---SPPAWAIGITTFGR  299 (534)
Q Consensus       253 ~~~~~~-----~~~~------------------------~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~  299 (534)
                      ...+++     .+++                        +..+++.+.+ .+....+..+++.   ++..+.++..++..
T Consensus       259 ~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgn  338 (528)
T KOG0253|consen  259 AKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGN  338 (528)
T ss_pred             hcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhh
Confidence            111110     0000                        0001111100 1112223344443   23455666666666


Q ss_pred             HHHHHHHHhchhhhhHhhh--C-----------------CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q psy14136        300 IWVHYIFIIPGPRYMKTIL--G-----------------FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTN  360 (534)
Q Consensus       300 ~~~~~~~~~~~~~~l~~~~--g-----------------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~  360 (534)
                      .+.+++.........+...  +                 .+...--.=..+..+..+.|.++.+++.||+|||+.+    
T Consensus       339 afsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTM----  414 (528)
T KOG0253|consen  339 AFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM----  414 (528)
T ss_pred             HHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH----
Confidence            6777766554444443211  0                 0111111123456788999999999999999999974    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHh
Q psy14136        361 IRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSP  439 (534)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~  439 (534)
                            +.++++.+++.+++.... ......+..+.+-++....+...+.+..|++|.. |+++.|....+..+|+++.|
T Consensus       415 ------al~l~~f~iflfll~~c~-~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p  487 (528)
T KOG0253|consen  415 ------ALSLILFGIFLFLLTTCK-TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSP  487 (528)
T ss_pred             ------HHHHHHHHHHHHHHHHhc-CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhh
Confidence                  677777777776665554 4444555566667777888889999999999988 99999999999999999999


Q ss_pred             HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+. ...+.      .-..+..+.+.+++++.++..+++-
T Consensus       488 ~iA-~~~e~------s~sl~i~vy~~~~ilagIavcffPi  520 (528)
T KOG0253|consen  488 VIA-MRAEL------STSLPIFVYGALFILAGIAVCFFPI  520 (528)
T ss_pred             HHH-HHhcc------ceeehHHHHHHHHHHHHHHheeeee
Confidence            998 33333      2334455556666666666666654

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.94  E-value=3.1e-24  Score=217.20  Aligned_cols=343  Identities=11%  Similarity=0.058  Sum_probs=238.6

Q ss_pred             ccccCChhhHHHH--HHHHHHHHHHhhccc-chhhcccCCeehhHHHHHHH-HHHHHHHH-HHHH-HHHHHHHHHHHHHh
Q psy14136         96 GEFDWDTTTQGAI--LSSFYWCYILSQVVG-GVLTQRFGTKTVFGFSQLVT-AICSLLIP-QAAV-LHYGALIALRSIQG  169 (534)
Q Consensus        96 ~~~~~s~~~~g~~--~s~~~l~~~~~~~~~-G~l~Dr~Grr~~l~~~~~~~-~i~~~l~~-~a~~-~~~~~l~~~r~l~G  169 (534)
                      +|.|.|.+++|++  .+++.+...+.+|+. ++..||+||||..++.+.+. ++.....+ +... ....+++..-++.+
T Consensus        29 ~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (390)
T TIGR02718        29 REDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACAS  108 (390)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHH
Confidence            3679999999997  467788888888888 55799999999875555332 21122211 1111 12334455556666


Q ss_pred             hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136        170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP  248 (534)
Q Consensus       170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p  248 (534)
                      +..+...+...++..|..++++++...+.. .+..+|.++|+.+.+++.+++|||.+|++.+++.++..+..++..|+++
T Consensus       109 ~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~  188 (390)
T TIGR02718       109 LASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAV  188 (390)
T ss_pred             HHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence            777778888888999999888888887755 5678999999999999999999999999999888776666555444332


Q ss_pred             CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhH
Q psy14136        249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLL  328 (534)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~  328 (534)
                      ++++.    +               ++...++++++|+|.++...+..++..........+.+.|++| .|+++++.+.+
T Consensus       189 ~~~~~----~---------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~  248 (390)
T TIGR02718       189 ASPEA----P---------------LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRL  248 (390)
T ss_pred             Ccccc----c---------------hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHH
Confidence            11100    0               0011246778899988888877788877777888889999988 79999999998


Q ss_pred             hhhHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH-HHHHHhhc----CCchhHHHHHHHHHHHHhh
Q psy14136        329 TGAPFL-CSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL-LVMLIGYL----GCNVALVLITWFVAVTLIT  402 (534)
Q Consensus       329 ~~~~~~-~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~  402 (534)
                      .....+ ..+++.++.|++.||+++|+.+          ..+..+.+. .+......    ............+..+..+
T Consensus       249 ~~~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  318 (390)
T TIGR02718       249 GMAGGAVTVLLGCGGGAWLVRRAGLWRTF----------ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG  318 (390)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhhHHHHH----------HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence            887764 6677889999999999998764          222222211 11111111    1122222333333344455


Q ss_pred             hcccccchhhhccC-C-CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        403 ASYAGAMANVVDIG-P-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       403 ~~~~~~~~~~~~~~-p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      ...+.......+.. | +++++.+++.+...++|..++|.+.|.+.|.     .||+..|++.+++.+++.+.
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-----~G~~~~f~~~~~~~l~a~~~  386 (390)
T TIGR02718       319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-----FGYAGGFLSGTVLAVLAILL  386 (390)
T ss_pred             HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHHHH
Confidence            55555555555544 4 4599999999999999999999999999998     78989998887776665543

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>KOG2615|consensus

Probab=99.94  E-value=2.5e-25  Score=208.22  Aligned_cols=337  Identities=17%  Similarity=0.138  Sum_probs=228.4

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW  176 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~  176 (534)
                      +.+.+..-.|.+.+.|++++.+.++.+|.++||+|||+++++|++..++..++  ++.+.||..+++.|++.|+..| ..
T Consensus        62 ~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll--~~~S~~F~afv~aR~l~Gi~kg-nl  138 (451)
T KOG2615|consen   62 PDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLL--WALSRNFAAFVLARFLGGIFKG-NL  138 (451)
T ss_pred             cccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhccC-ch
Confidence            33456678899999999999999999999999999999999999999998888  5666799788888999999987 67


Q ss_pred             hhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh---hcCCchhhhhh----chhhHHHHHHhhhhccCCC
Q psy14136        177 PAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA---HYGWRSVFYTT----GSLGAIWCVAWWFLAFDAP  248 (534)
Q Consensus       177 ~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~---~~gwr~~f~i~----~~~~li~~i~~~~~~~~~p  248 (534)
                      .+..++++|.+++|+|+++++ +....++|.++||.+|+++.+   ..| +.+|...    .++...-.....+++||+-
T Consensus       139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL  217 (451)
T KOG2615|consen  139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETL  217 (451)
T ss_pred             HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            899999999999999999999 668999999999999999988   222 2222221    1222221223344567764


Q ss_pred             CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHH-------HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc
Q psy14136        249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPA-------WAIGITTFGRIWVHYIFIIPGPRYMKTILGFS  321 (534)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s  321 (534)
                      +.+++.  ++.....+..+..+...+.....-...+|++..       -.+.+..+.+...+..+..+.+.+..+.+|++
T Consensus       218 ~~rk~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~s  295 (451)
T KOG2615|consen  218 PLRKRN--DEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYS  295 (451)
T ss_pred             cchhhc--ccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCC
Confidence            443332  111111111111100000000001112333221       23334445555555555555565656779999


Q ss_pred             cccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q psy14136        322 IQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLI  401 (534)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (534)
                      +.+.|.+.+..++.+.+......+..+|.+....        ......+.+..-.++++.... ....+.....+..+..
T Consensus       296 s~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~--------a~l~~~l~~~vP~~llls~~~-~~~~l~~~s~l~sf~~  366 (451)
T KOG2615|consen  296 SMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIK--------AVLLFSLLLIVPAFLLLSLAR-TPVVLYLGSTLKSFST  366 (451)
T ss_pred             hhhheeeeehhhHHHHHHHHhccccccccccchh--------hHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHH
Confidence            9999999998888888888777777777652210        112233333333334444444 4455556666666666


Q ss_pred             hhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        402 TASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       402 ~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ....+....++....|++ ||+++|+....+.++-++||.+.|.+...
T Consensus       367 A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W  414 (451)
T KOG2615|consen  367 ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW  414 (451)
T ss_pred             HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence            666677777788888866 99999999999999999999999998876

>KOG0255|consensus

Probab=99.94  E-value=1.9e-24  Score=226.92  Aligned_cols=368  Identities=16%  Similarity=0.149  Sum_probs=255.6

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+.++.+.....+..+++++|.++|++++|+++||+|||++++.++++..++.++++++  +|++.+++.|+++|++.+.
T Consensus       110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a--~~~~~~~~~Rfl~G~~~~~  187 (521)
T KOG0255|consen  110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA--PNYWMFLIFRFLSGFFGSG  187 (521)
T ss_pred             hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhccc
Confidence            35777888999999999999999999999999999999999999999999999886665  7999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCccc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRI  254 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~  254 (534)
                      .......++.|++++++|+.+..+......++.+++++++++..  +||+.+++..+++++..+. +++.||+|+.....
T Consensus       188 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~  264 (521)
T KOG0255|consen  188 PLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK  264 (521)
T ss_pred             hhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence            99999999999999999999999855667788888888888887  6999999999888886665 55666888643211


Q ss_pred             ch-hhhhhhhhc--------cCc------------cccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136        255 TR-KELDYIQEN--------IEP------------TIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY  313 (534)
Q Consensus       255 ~~-~~~~~~~~~--------~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (534)
                      .+ ++..+..+.        ...            .+....+++..+.++++.|++....+......+.......-++..
T Consensus       265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~  344 (521)
T KOG0255|consen  265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN  344 (521)
T ss_pred             CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence            11 111111000        000            000011123457778888754444333333332222222222222


Q ss_pred             hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchh--HHH
Q psy14136        314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVA--LVL  391 (534)
Q Consensus       314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  391 (534)
                      ... +|.+.   .......+.....+....+...|+.|||..          ...+..+..++++...+......  ...
T Consensus       345 ~~~-lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (521)
T KOG0255|consen  345 VSG-LGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPP----------LFLSLFLAGIGLLLFGWLPDDLGGWLHW  410 (521)
T ss_pred             hhh-cCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence            222 34333   333444455777788888899999988765          45666677777777666653333  456


Q ss_pred             HHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHH-H
Q psy14136        392 ITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGS-C  469 (534)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~-~  469 (534)
                      +...+..++.+..+...+.+..|+.|+. |+.+.+.......++++++|.+.-..... .   ....  +...+.+.. .
T Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~-~---~~~~--~~~~~~~~~l~  484 (521)
T KOG0255|consen  411 ILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM-F---PLLG--LILFGWLALLL  484 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c---ccch--HHHHHHHHHHH
Confidence            6666667777777777789999999988 99999999999999999999887433322 0   1221  122333333 3


Q ss_pred             HHHHHHhhcCCccccCCC
Q psy14136        470 TYFFYQVLGTSEVQPWNQ  487 (534)
Q Consensus       470 ~~~~~~~~~~~~~~~~~~  487 (534)
                      +.+..+++++++.+...+
T Consensus       485 ~~~~~~~lpet~~~~l~~  502 (521)
T KOG0255|consen  485 GLLSLLLLPETKGKPLPG  502 (521)
T ss_pred             HHHHHhcCcccCCCCCch
Confidence            334447778877766543

>PTZ00207 hypothetical protein; Provisional

Probab=99.94  E-value=5.6e-25  Score=226.68  Aligned_cols=378  Identities=11%  Similarity=0.033  Sum_probs=271.5

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV----LHYGALIALRSIQGI  170 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~----~~~~~l~~~r~l~G~  170 (534)
                      ++++|+|..+++++.++. ....+++++.|++.||+|||++++++.+++++++++++++..    .+++.+++.|++.|+
T Consensus        54 ~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~  132 (591)
T PTZ00207         54 QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTL  132 (591)
T ss_pred             HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHH
Confidence            569999999999999874 445677888999999999999999999999999999877632    479999999999999


Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      |.+...+.....+.+|+| ++||++.|+ ..+.++|.++.+.+...+.. .+|+..|++.++++++..++.+.++++.|.
T Consensus       133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~  210 (591)
T PTZ00207        133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMRLPPF  210 (591)
T ss_pred             HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhheeCCcc
Confidence            999999999999999996 789999995 47889998764444444333 368999999999999888888877776653


Q ss_pred             CCc-----ccchhhhhhhh--------h--------------------------------------------cc------
Q psy14136        250 KHP-----RITRKELDYIQ--------E--------------------------------------------NI------  266 (534)
Q Consensus       250 ~~~-----~~~~~~~~~~~--------~--------------------------------------------~~------  266 (534)
                      ...     +.+++|+...+        +                                            .+      
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~  290 (591)
T PTZ00207        211 HLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIF  290 (591)
T ss_pred             hhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            221     11122211000        0                                            00      


Q ss_pred             ---------------C-c-----------------ccc-------C-C-CCCcccHHHhhcCHHHHHHHHHHHHHHHHHH
Q psy14136        267 ---------------E-P-----------------TIV-------G-S-KGLKVPWVSILTSPPAWAIGITTFGRIWVHY  304 (534)
Q Consensus       267 ---------------~-~-----------------~~~-------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (534)
                                     . +                 .+.       + . ++...++++.+++..+|++++..++......
T Consensus       291 p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl  370 (591)
T PTZ00207        291 PFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHF  370 (591)
T ss_pred             HHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchh
Confidence                           0 0                 000       0 0 0111266778888999999999999999888


Q ss_pred             HHHhchhhhhHhhhCCcccc--chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        305 IFIIPGPRYMKTILGFSIQT--NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY  382 (534)
Q Consensus       305 ~~~~~~~~~l~~~~g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (534)
                      .+...+.++.+..-|.+...  ...+.++.++++.+|++..|.+.....+|+..+ ..-|...+.+..+ ..+..+++..
T Consensus       371 ~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~-r~prt~~l~~~~~-~~~~~lll~~  448 (591)
T PTZ00207        371 VIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAED-RVPITIALFIPSV-CIITMLTLFL  448 (591)
T ss_pred             eeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhcccc-ccchhHHHHHHHH-HHHHHHHHHH
Confidence            88888888888743763333  333788999999999999999884444443110 0113333444444 3333333333


Q ss_pred             cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHH-hHhhhhccccccc--------Ch
Q psy14136        383 LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLS-PMVAGYFLQDDET--------SL  453 (534)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~-~~~~g~l~~~~~~--------~~  453 (534)
                      .- ....+.+..++.+++.|..++.....+.|++.++-|+-.-+.....-+|..+- -.+.|.++|....        +.
T Consensus       449 ~~-p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~  527 (591)
T PTZ00207        449 TL-PKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTER  527 (591)
T ss_pred             HC-CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCc
Confidence            32 22567788888899999999999999999999779998888888888887765 6688999987221        11


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        454 ESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       454 ~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      .=++..|++++++++++.++...+.
T Consensus       528 ~C~~~~~~v~~~~~~~g~~~s~~l~  552 (591)
T PTZ00207        528 VCVVMPLAFLLGLSFLAFITSTYVH  552 (591)
T ss_pred             eeeHhHHHHHHHHHHHHHHHHhhee
Confidence            2368889999999988888766653

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.93  E-value=1.9e-23  Score=216.72  Aligned_cols=374  Identities=14%  Similarity=0.086  Sum_probs=235.9

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      ++++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.++++++. ++.+.++++|+++|++.|
T Consensus        49 ~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~-~~~~~l~~~~~l~gig~g  127 (500)
T PRK09584         49 VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG-HDAGIVYMGMATIAVGNG  127 (500)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHhhh
Confidence            44899999999999988887777777899999999 5999999999999999988876542 346677789999999999


Q ss_pred             chhhhHHHHHhcccCCCc--chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHH---hhhhccCC
Q psy14136        174 LTWPAMYALVGHWIPSNE--RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVA---WWFLAFDA  247 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~--r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~---~~~~~~~~  247 (534)
                      ...+...+++.|++|+++  |..+++ .+.+.++|..+||.+++++.+++|||+.|++.++..++..+.   ....+++.
T Consensus       128 ~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~  207 (500)
T PRK09584        128 LFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQY  207 (500)
T ss_pred             cccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccC
Confidence            999999999999998654  445677 568899999999999999999999999999887544443322   22233332


Q ss_pred             CCCCcccchhhhhhhh------------hc-cCccccCC--------------CCCcccHHHhhcCHHHHHHHHHHHHHH
Q psy14136        248 PLKHPRITRKELDYIQ------------EN-IEPTIVGS--------------KGLKVPWVSILTSPPAWAIGITTFGRI  300 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~------------~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (534)
                      +++.+..+.+......            .. ....+...              ........+.-+ ++.+.. +..+...
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~  285 (500)
T PRK09584        208 GSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR-RKMIVA-FILMLEA  285 (500)
T ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHH-HHHHHHH
Confidence            1111100000000000            00 00000000              000000011111 222222 2222333


Q ss_pred             HHHHHHHhchhhhhHh--hhCCcc------ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q psy14136        301 WVHYIFIIPGPRYMKT--ILGFSI------QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI  372 (534)
Q Consensus       301 ~~~~~~~~~~~~~l~~--~~g~s~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~  372 (534)
                      ..++......|.++..  ....+.      ...+++.+...+..++..++.+++-+|.++|...      .....+++++
T Consensus       286 i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~------~~~~~~G~~l  359 (500)
T PRK09584        286 IIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM------PHKFAIGMVL  359 (500)
T ss_pred             HHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc------HHHHHHHHHH
Confidence            4444555555555442  111221      2256667777777778878877777777766321      1124566667


Q ss_pred             HHHHHHHHhhcCC--------chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136        373 PALLVMLIGYLGC--------NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAG  443 (534)
Q Consensus       373 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g  443 (534)
                      .+++++.+.....        +.++.+...++.+.+.....|....++.+..|++ ||+++|+......+|..++..+.+
T Consensus       360 ~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~  439 (500)
T PRK09584        360 CSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN  439 (500)
T ss_pred             HHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666665544321        2456777788888888899999999999999987 999999887777777766666654


Q ss_pred             hcccc----c-ccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        444 YFLQD----D-ETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       444 ~l~~~----~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .....    + .....++...|...+++.++..++.+.+
T Consensus       440 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~  478 (500)
T PRK09584        440 LMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT  478 (500)
T ss_pred             HhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            22210    0 0001247788888887766555544444

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.93  E-value=1.5e-29  Score=261.25  Aligned_cols=368  Identities=18%  Similarity=0.234  Sum_probs=246.2

Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhcchhh
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL---HYGALIALRSIQGIASGLTWP  177 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~---~~~~l~~~r~l~G~g~g~~~~  177 (534)
                      +..+.+++.+...+|..+|++++|.++||+|||+.++++.++..+++++.+++  +   +++.+.++|+++|++.|...+
T Consensus        44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~R~~~G~~~g~~~~  121 (451)
T PF00083_consen   44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFA--PSYNNFWMLLIGRFLIGFGIGGAYV  121 (451)
T ss_pred             hHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc
Confidence            56789999999999999999999999999999999999999999999997665  6   899999999999999999999


Q ss_pred             hHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh---cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        178 AMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH---YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       178 ~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~---~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ....++.|..|+++|++..++. .+..+|.+++..++..+...   .+||..+++.++++++..+ ..+++||+|+..-.
T Consensus       122 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~  200 (451)
T PF00083_consen  122 VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLS  200 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceecc
Confidence            9999999999999999999944 67788888888776555333   3599999999888877555 44678999875322


Q ss_pred             cchhh-hhh-hhh---------ccCcc---ccCCCCCcccHHHhhcCHH----HHHHHHHHHHHH-HHHHHHHhchhhhh
Q psy14136        254 ITRKE-LDY-IQE---------NIEPT---IVGSKGLKVPWVSILTSPP----AWAIGITTFGRI-WVHYIFIIPGPRYM  314 (534)
Q Consensus       254 ~~~~~-~~~-~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~l  314 (534)
                      +.+.+ .++ .++         +.++.   .++.++.+..++++++++.    +...+....... .+......+.+.++
T Consensus       201 ~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~  280 (451)
T PF00083_consen  201 KGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIF  280 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccc
Confidence            21111 100 000         00000   0011111234666777643    222222233332 23334445556665


Q ss_pred             HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh----hcCCc----
Q psy14136        315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG----YLGCN----  386 (534)
Q Consensus       315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----  386 (534)
                      ++ .+.+..  -.......+..+++.+++.++.||+|||+.+          ..+..+.+++...+.    .....    
T Consensus       281 ~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~----------i~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (451)
T PF00083_consen  281 EN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL----------IIGLLLMAICSLILGIIFFLGVSSSSWW  347 (451)
T ss_pred             cc-cccccc--ccccccccccccccccccccccccccccccc----------cccccccccccccccccccccccccccc
Confidence            54 566655  2333445567777888888999999999775          344444443333332    11111    


Q ss_pred             hhHHHHHHHHHHHHhh-hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHH
Q psy14136        387 VALVLITWFVAVTLIT-ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAG  464 (534)
Q Consensus       387 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~  464 (534)
                      ....+....+.....+ ...+..+.+..|.+|.+ |+++.|+....+.+++++++.+...+.+.     .+....+.+.+
T Consensus       348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-----~~~~~~~~i~~  422 (451)
T PF00083_consen  348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-----LGGWGVFLIFA  422 (451)
T ss_pred             ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccchhhH
Confidence            1122222222222222 44456668889999977 99999999999999999999999888877     44233444444


Q ss_pred             HH-HHHHHHHHHhhcCCccccCCCCC
Q psy14136        465 AV-GSCTYFFYQVLGTSEVQPWNQLK  489 (534)
Q Consensus       465 ~~-~~~~~~~~~~~~~~~~~~~~~~~  489 (534)
                      ++ .+...+.+++++|++.++.+|.+
T Consensus       423 ~~~~i~~i~~~~~lpET~g~~l~ei~  448 (451)
T PF00083_consen  423 GVCLIAIIFVYFFLPETKGKTLEEIQ  448 (451)
T ss_pred             HHHHHHHhheeEEEeeCCCCCHHHHH
Confidence            44 44444555667888887766543

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG4686|consensus

Probab=99.92  E-value=8e-25  Score=196.08  Aligned_cols=366  Identities=16%  Similarity=0.133  Sum_probs=248.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~  172 (534)
                      +.|.+++.++..++.+.|++..++..+++|++.|| +|.|+.-++-+....+|.++.+.. .++.+|.++++||+.|+|.
T Consensus        71 k~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGg  150 (459)
T KOG4686|consen   71 KLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGG  150 (459)
T ss_pred             hcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCc
Confidence            66888899999999999999999999999999997 688887777777777887774321 3468999999999999998


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCch---------hhhhhchhhHHHHHHhhh
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRS---------VFYTTGSLGAIWCVAWWF  242 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~---------~f~i~~~~~li~~i~~~~  242 (534)
                      -....+-.+++.-|+..||.+.++|++ +...+|..+--.+.+++.+..+=-.         ..+..+.......+.+..
T Consensus       151 ESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical  230 (459)
T KOG4686|consen  151 ESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL  230 (459)
T ss_pred             hhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888899999999999999999999966 6777888776666666665532100         001111111111111111


Q ss_pred             hccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhh-cCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc
Q psy14136        243 LAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSIL-TSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFS  321 (534)
Q Consensus       243 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s  321 (534)
                      .+--      ..+..|+...+++-...+   . +  ...+.. -.|.+|.+.+..+++..+...+....|.++++.+|+|
T Consensus       231 ~lg~------~D~rAerilh~e~g~~Ge---~-p--kLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS  298 (459)
T KOG4686|consen  231 SLGL------SDDRAERILHLEEGFLGE---E-P--KLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLS  298 (459)
T ss_pred             Hhhh------hhhHHHHHHhhhcCcccC---C-c--ccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCC
Confidence            1000      000111111111100000   0 0  111111 1378999999999999999999999999999999999


Q ss_pred             cccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHh
Q psy14136        322 IQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLI  401 (534)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (534)
                      +..++.+.+.......+.+++.|.++||+|++...         ..-+.+...+.-..+.++..++   +..+.+.+...
T Consensus       299 ~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsP---y~~m~~lGLsy  366 (459)
T KOG4686|consen  299 AVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSP---YTSMTFLGLSY  366 (459)
T ss_pred             hhhccchhhhhhhhhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccH---HHHHHHHhhhH
Confidence            99999999999999999999999999999997653         2222233333333333332233   33444444444


Q ss_pred             hhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        402 TASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       402 ~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      .......+..+..+.|++ .|++.|..+.+.++|-++.|.+.|.+.|.++ +....+..|+..+.+.+.+..+.+.+.++
T Consensus       367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g-~y~~le~ffl~~~~~aL~svgil~~~N~k  445 (459)
T KOG4686|consen  367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG-SYDNLEAFFLIIGLMALTSVGILFYLNKK  445 (459)
T ss_pred             HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC-chhhHHHHHHHHHHHHHHHHHHHhheecc
Confidence            444445666777778877 9999999999999999999999999999822 12233444555555555555555555555


Q ss_pred             ccccC
Q psy14136        481 EVQPW  485 (534)
Q Consensus       481 ~~~~~  485 (534)
                      ++...
T Consensus       446 q~gnL  450 (459)
T KOG4686|consen  446 QSGNL  450 (459)
T ss_pred             ccCCC
Confidence            54433

>TIGR00788 fbt folate/biopterin transporter

Probab=99.89  E-value=2.1e-22  Score=207.22  Aligned_cols=358  Identities=13%  Similarity=0.017  Sum_probs=232.7

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-----CeehhHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-----TKTVFGFSQLVTA-ICSLLIPQAAVLH-YGALIALRSI  167 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-i~~~l~~~a~~~~-~~~l~~~r~l  167 (534)
                      ++++|+|+++++...++..+...+-.+ +|+++||++     ||+.++++.++.+ ++...  ++..++ .....+..++
T Consensus        53 ~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~--l~~~~~~~~~~~~~~~l  129 (468)
T TIGR00788        53 TDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGL--LPGKVSSAKVAAAFIFL  129 (468)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh--cccccchHHHHHHHHHH
Confidence            458999999999999999999999666 999999998     7777888877763 33222  332234 3444458999


Q ss_pred             HhhhhcchhhhHHHHHhcccCCCcchhhhhhh----hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhh
Q psy14136        168 QGIASGLTWPAMYALVGHWIPSNERSRFMSSF----QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL  243 (534)
Q Consensus       168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~----~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~  243 (534)
                      .+++.+...++..+++.|..+ +++....+..    ...++|.++++.++|.+.+.++||..|++.+++.++.. +..++
T Consensus       130 ~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~-~~~~~  207 (468)
T TIGR00788       130 AALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL-FVSNL  207 (468)
T ss_pred             HHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-HHHHh
Confidence            999999999999999999998 5554433333    33458999999999999999999999999988877763 34455


Q ss_pred             ccCCCC-CCcccchhhh---hhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHH-HHHHHHHHHhchhhhhHhhh
Q psy14136        244 AFDAPL-KHPRITRKEL---DYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFG-RIWVHYIFIIPGPRYMKTIL  318 (534)
Q Consensus       244 ~~~~p~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~  318 (534)
                      .+|++. ..++..+++.   .........   ..++.....++.+++|.++...+..++ .......... .-.+.++..
T Consensus       208 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~-~f~~~~~~l  283 (468)
T TIGR00788       208 SKERRAFVRPRIGTYLEMNMALLTLGVLA---NVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGS-VFCATTQCL  283 (468)
T ss_pred             cccccccccccccccchhhhhhhhhhHHH---HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCce-eEEEEcccC
Confidence            666531 1111100000   000000000   000111234556788888876655555 2221111111 111333458


Q ss_pred             CCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc---------CCchhH
Q psy14136        319 GFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL---------GCNVAL  389 (534)
Q Consensus       319 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  389 (534)
                      |+++...|.+....+++.+++..+.+++.+|++.|+.+          .++.++.+++.+.....         ..+.+.
T Consensus       284 G~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l----------~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~  353 (468)
T TIGR00788       284 PGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLF----------GVTTLLYTLSSLFDLILVKRWNLAFGISDEVF  353 (468)
T ss_pred             CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHH----------HHHHHHHHHHHhCceeeeeccccccCCCCeee
Confidence            99999999999999999999999999988888877653          34444444333221100         012233


Q ss_pred             HHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHH
Q psy14136        390 VLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGS  468 (534)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~  468 (534)
                      .....++..++.+........++.+..|++ +|+..++.+.+.++|..+++.++|.+.+..+.....++..+....+..+
T Consensus       354 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~  433 (468)
T TIGR00788       354 VLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSL  433 (468)
T ss_pred             eeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence            344445556666666777788888888876 9999999999999999999999998887722111235555555444444


Q ss_pred             HHH
Q psy14136        469 CTY  471 (534)
Q Consensus       469 ~~~  471 (534)
                      ..+
T Consensus       434 ~~l  436 (468)
T TIGR00788       434 APL  436 (468)
T ss_pred             HHH
Confidence            333

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.89  E-value=1.1e-20  Score=192.53  Aligned_cols=357  Identities=13%  Similarity=0.051  Sum_probs=265.8

Q ss_pred             hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHH
Q psy14136        103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGF-SQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYA  181 (534)
Q Consensus       103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~-~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~  181 (534)
                      +..++..++..+..++..|+.|.++|+-|+||.++. ..++.++.+++..+....+++...+.-++.-++.+.......+
T Consensus        70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna  149 (477)
T PF11700_consen   70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA  149 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999999999997765554 4555555666654443345666666666666777888999999


Q ss_pred             HHhcccCCCcc--------------------------hhhhh-hhhhhhhHHHhhhhHHHHhhhh--------cCCchhh
Q psy14136        182 LVGHWIPSNER--------------------------SRFMS-SFQGFSFGIGLTYPLCGFLIAH--------YGWRSVF  226 (534)
Q Consensus       182 ~i~~~~~~~~r--------------------------~~~~~-~~~~~~~G~~~g~~l~~~l~~~--------~gwr~~f  226 (534)
                      ++.|..+++++                          ++..+ -++...+|+++.-.+.-.+...        .+-|..+
T Consensus       150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~  229 (477)
T PF11700_consen  150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF  229 (477)
T ss_pred             HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence            99999999888                          88888 4566778877766655444322        2358888


Q ss_pred             hhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHH
Q psy14136        227 YTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF  306 (534)
Q Consensus       227 ~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (534)
                      .+.++.-++..+..++++|+.|..++.....+.  .....       ++....++++.|.|.+...++..++..-+...+
T Consensus       230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~--~~~g~-------~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti  300 (477)
T PF11700_consen  230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY--LRFGF-------KRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTI  300 (477)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH--HHHHH-------HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence            888888888888888888888763221111110  00000       111234566778899999999999999999999


Q ss_pred             HhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhh--cccchhHHHHHHHHHHHHHH-HHHHHHHh--
Q psy14136        307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVR--NIMSLTNIRKVFTAISQVIP-ALLVMLIG--  381 (534)
Q Consensus       307 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--  381 (534)
                      ......|.++.+|++..+...+.....+.+++|+++.|++.||+|.|  +.+          .++.++. .+.+..+.  
T Consensus       301 ~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l----------~~~l~~~~~i~~~g~~G~  370 (477)
T PF11700_consen  301 ISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL----------LISLILWIIIPLYGLFGF  370 (477)
T ss_pred             HHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH----------HHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999998  432          1111111 11111111  


Q ss_pred             ----hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhH
Q psy14136        382 ----YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESW  456 (534)
Q Consensus       382 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~  456 (534)
                          ....+.+..++..++.+.+.|..++..-++..++.|+. .+..+|++...+...+++||.+.|.+.+.  +  ++.
T Consensus       371 ~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~--t--g~~  446 (477)
T PF11700_consen  371 WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDA--T--GSQ  446 (477)
T ss_pred             hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--CCc
Confidence                01225566777777888888998999999999998876 99999999999999999999999999998  2  457


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        457 RQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       457 ~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      +..+....++.++++++...+..++.
T Consensus       447 r~g~~~l~~lf~~gl~ll~~v~~~~g  472 (477)
T PF11700_consen  447 RYGFLFLLVLFLIGLILLFFVDVEKG  472 (477)
T ss_pred             hhHHHHHHHHHHHHHHHHhhccchhh
Confidence            88899888888888888766655443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.89  E-value=1.1e-20  Score=188.98  Aligned_cols=353  Identities=15%  Similarity=0.169  Sum_probs=250.4

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-CeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-TKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      +.|.|..|+|++.++..+...++++++|.++||++ +||++.+..++.++.....  ...++++.+++.-++..+.....
T Consensus        31 ~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~--~~~~~f~~~~~~~~l~~~~~~p~  108 (400)
T PF03825_consen   31 SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL--AFSSSFWWLFVIMLLFSFFFSPT  108 (400)
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHHHHccH
Confidence            56899999999999999999999999999999986 5777777777766655443  33468888888888889888889


Q ss_pred             hhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhH-HHHhhhhcCC---chhhhhhchhhHHHHHHhhhhccCCCCC
Q psy14136        176 WPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPL-CGFLIAHYGW---RSVFYTTGSLGAIWCVAWWFLAFDAPLK  250 (534)
Q Consensus       176 ~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l-~~~l~~~~gw---r~~f~i~~~~~li~~i~~~~~~~~~p~~  250 (534)
                      .|...++..+...  +++.-.| +-...++|.+++... ++.+....++   ...+++.+...++..... +.+|+.|.+
T Consensus       109 ~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~  185 (400)
T PF03825_consen  109 MPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKTPPK  185 (400)
T ss_pred             HHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCCccc
Confidence            9999999999885  3444555 556667777666543 2333333332   345566555544433333 345665522


Q ss_pred             CcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhh
Q psy14136        251 HPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG  330 (534)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~  330 (534)
                      ++..  ++.             ++....+..+++|+|+++...+..++..........+.+.|+++..|.+....+.+.+
T Consensus       186 ~~~~--~~~-------------~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~  250 (400)
T PF03825_consen  186 RSAK--ESV-------------KKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWA  250 (400)
T ss_pred             cccC--CCc-------------ccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHH
Confidence            1110  000             0111223457999999999999989888888899999999999854477778888888


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH----HHHHHHhhhccc
Q psy14136        331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITW----FVAVTLITASYA  406 (534)
Q Consensus       331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  406 (534)
                      +..+..++.-...+++..|+|.++.          +.++.+..++=..++.....+.+......    .+-+...+....
T Consensus       251 l~~~aEi~~f~~~~~~~~r~g~~~l----------l~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~  320 (400)
T PF03825_consen  251 LGVVAEIPFFFFSGRFLKRFGIKWL----------LLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHA  320 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHH
Confidence            8889999999999999999998876          36777777777777777632433333322    345666777778


Q ss_pred             ccchhhhccCCCc-hhHHHHHHhHH-HHhhhhHHhHhhhhcccccccC-hhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        407 GAMANVVDIGPNF-AGPILAFAQTI-HMTASFLSPMVAGYFLQDDETS-LESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       407 ~~~~~~~~~~p~~-~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      ....++.+..|++ |+++.++++.. ..+|..+|..++|+++|..+.. ...|...+.+.+++.++..+++.++.|
T Consensus       321 a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk  396 (400)
T PF03825_consen  321 ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK  396 (400)
T ss_pred             HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            8888999999977 99999999886 4689999999999999982211 123445566666666555555555433

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.88  E-value=4.7e-21  Score=187.93  Aligned_cols=355  Identities=15%  Similarity=0.126  Sum_probs=243.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHH--HHHHH-HHH--HHHHH-HHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAI--CSLLI-PQA--AVLHY-GALIALRSIQ  168 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i--~~~l~-~~a--~~~~~-~~l~~~r~l~  168 (534)
                      ++..|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++..+.+..+  +.... .+.  ...|+ ...+++-+..
T Consensus        35 ~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l  114 (412)
T PF01306_consen   35 TQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYL  114 (412)
T ss_dssp             HHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTT
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999999999977766554433222  22221 111  01122 2233334444


Q ss_pred             hhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        169 GIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       169 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      |+......|+.-+++.++.  ++.+.-.| .-...++|.+++..++|.+.+. +-+..||+....+++..++.++..|+.
T Consensus       115 ~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~  191 (412)
T PF01306_consen  115 GLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDV  191 (412)
T ss_dssp             TTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---S
T ss_pred             HHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcC
Confidence            5555556677777666665  34455566 5578899999999999999874 456788877766666655555555544


Q ss_pred             CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh---CCcccc
Q psy14136        248 PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL---GFSIQT  324 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~  324 (534)
                      +++.+..+.++.+           +++.......+++|+|++|.+.+........+..+-...|.|....+   +.+...
T Consensus       192 ~~~~~~~~~~~~~-----------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~  260 (412)
T PF01306_consen  192 PPQAEVADALGAK-----------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQM  260 (412)
T ss_dssp             SSSS-SSTTSSS-----------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHH
T ss_pred             chhhhhhcccccC-----------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhH
Confidence            4332211111000           00111234568899999999998888877777777766777776532   344566


Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      .|++.+...+..++...+..++.+|+|.|+.+          .++..+..+=....++.+ +.+.+...-.+-++-....
T Consensus       261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L----------llag~i~~iRi~~~~~~~-~~~~i~~~klLH~~e~~l~  329 (412)
T PF01306_consen  261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLL----------LLAGVIMAIRIIGSGFAT-NPWVISLIKLLHALEFPLL  329 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH----------HHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH----------HHHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHHHH
Confidence            88899999999999999999999999999874          566666777777777777 7777777777777777777


Q ss_pred             ccccchhhhccCCCc-hhHHHHHH-hHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        405 YAGAMANVVDIGPNF-AGPILAFA-QTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       405 ~~~~~~~~~~~~p~~-~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .....-++.+.+|++ .++...+. +....+|..+.+.+.|.++|.     .|++..|++++.+.++..++..+.-+
T Consensus       330 lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~-----~G~~~tylimg~iv~~~~li~~f~l~  401 (412)
T PF01306_consen  330 LVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR-----IGFQHTYLIMGLIVLPFTLISAFTLK  401 (412)
T ss_dssp             HHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh-----cCcHHHHHHHHHHHHHHHHHheeeec
Confidence            778888899999887 78888885 677889999999999999999     89999999988887776666655543

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.88  E-value=2.2e-20  Score=189.10  Aligned_cols=362  Identities=15%  Similarity=0.108  Sum_probs=247.4

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhc----ccCCeehhHHH-HHHHHHHHHHHHHHHHHHH-------------
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ----RFGTKTVFGFS-QLVTAICSLLIPQAAVLHY-------------  158 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~l~~~-~~~~~i~~~l~~~a~~~~~-------------  158 (534)
                      ++|.+..+.+++..+..+...+.+|+.|+++|    |+||||.++++ .+..+++.++.+++  ++.             
T Consensus        33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~--~~~~~~~~~~~~~~~~  110 (477)
T TIGR01301        33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA--ADIGHLFGDNLDKKTK  110 (477)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC--chhhhhccccccccch
Confidence            78999999999999999999999999999999    59999998875 55555555554443  232             


Q ss_pred             ----HHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcc--hhhhhhh-hhhhhHHHhhhhHHHHh--hhhc---------
Q psy14136        159 ----GALIALRSIQGIASGLTWPAMYALVGHWIPSNER--SRFMSSF-QGFSFGIGLTYPLCGFL--IAHY---------  220 (534)
Q Consensus       159 ----~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r--~~~~~~~-~~~~~G~~~g~~l~~~l--~~~~---------  220 (534)
                          ..++++-.+..++.....+...++++|.+|+++|  +.+.++. ...++|.++|+.++++.  .+.+         
T Consensus       111 ~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~  190 (477)
T TIGR01301       111 PRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACG  190 (477)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccc
Confidence                2233333345557788889999999999998865  4677744 67899999999998875  2221         


Q ss_pred             ----CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhc-----CHHHHH
Q psy14136        221 ----GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILT-----SPPAWA  291 (534)
Q Consensus       221 ----gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  291 (534)
                          +.|..|++.+++.++..++..+..+|.|...++..+++  +.    ++.  ++......++++++     .|.++.
T Consensus       191 ~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~--~~----~~~--~~~~~~~~~~~i~~~~~~mP~~m~~  262 (477)
T TIGR01301       191 VSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS--EA----APP--SKHGEEAFFGELFGAFKYLPRPVWI  262 (477)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh--hc----ccc--cccchhhhHHHHHHHHHHCCHHHHH
Confidence                56889999988888888888888888764322111100  00    000  00111122344443     267899


Q ss_pred             HHHHHHHHHHHHHHHHhchhhhhHh-hhCCcccc----------chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q psy14136        292 IGITTFGRIWVHYIFIIPGPRYMKT-ILGFSIQT----------NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTN  360 (534)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~----------~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~  360 (534)
                      +++..++..++.+.+..|.+.|+.+ .++.++..          ..+......+...+.+++..++.+|+|+|+..    
T Consensus       263 l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~----  338 (477)
T TIGR01301       263 LLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL----  338 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH----
Confidence            9999999999999999999998874 55544321          12233444555567777788888888754332    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC---c-----------------hhHHHHHHHHHHHHhhhcccccchhhhccCCC--
Q psy14136        361 IRKVFTAISQVIPALLVMLIGYLGC---N-----------------VALVLITWFVAVTLITASYAGAMANVVDIGPN--  418 (534)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--  418 (534)
                           -.++.++.++++....+...   +                 .+..++.+...++..+......++++.+..|+  
T Consensus       339 -----~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~  413 (477)
T TIGR01301       339 -----WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG  413 (477)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence                 13444444444444432210   0                 25566667777888888888899998887773  


Q ss_pred             -chhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh-cCC
Q psy14136        419 -FAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL-GTS  480 (534)
Q Consensus       419 -~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~-~~~  480 (534)
                       +.|..+|+.|.+..+.+.+.....|.+.+..+   .+-..++.+.++.+++++++.++. ++.
T Consensus       414 ~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g---~~~~~~~~~~gv~~~~aa~~~~~~~~~~  474 (477)
T TIGR01301       414 AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG---GGNLPAFVVGAVAAFVSGLLALILLPRP  474 (477)
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC---CCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence             37999999999999999999988888555511   244567778888777777766554 443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.88  E-value=8.1e-22  Score=204.13  Aligned_cols=329  Identities=12%  Similarity=0.037  Sum_probs=221.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhc----ccCC-eehhHHHHHHHHHHHHHHHHHH---HH--HHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ----RFGT-KTVFGFSQLVTAICSLLIPQAA---VL--HYGALIAL  164 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Gr-r~~l~~~~~~~~i~~~l~~~a~---~~--~~~~l~~~  164 (534)
                      .+.+|+++.++|.+..+..+.-++..|+.|+++|    |+|| |+.++++.+..+++.+++ +..   .+  .+..+++.
T Consensus        34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll-f~~p~~~~~~~~~~~~~~  112 (473)
T PRK10429         34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL-FSAHLFEGTAQYVFVCVT  112 (473)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH-HcCCCCCccHHHHHHHHH
Confidence            5678999999999999999999999999999999    6698 556677877777776554 321   01  23455666


Q ss_pred             HHHHhhhhcchhhhHHHHHhccc-CCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhh-------cCCchhhhhhchhhHH
Q psy14136        165 RSIQGIASGLTWPAMYALVGHWI-PSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAH-------YGWRSVFYTTGSLGAI  235 (534)
Q Consensus       165 r~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~i~~~~~li  235 (534)
                      -++.+++.....+...+++.|.. ++++|.+..+. ..+.++|..+.+.+...+.+.       .+|+....+.+++.++
T Consensus       113 ~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~  192 (473)
T PRK10429        113 YILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIV  192 (473)
T ss_pred             HHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence            67778888888888999999998 58899998885 566667655555444333221       3567777777666666


Q ss_pred             HHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhH
Q psy14136        236 WCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMK  315 (534)
Q Consensus       236 ~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  315 (534)
                      ..+..++..||.++......+ +            +++.+.+..++.+++||.++.+++..++..........+.+.|.+
T Consensus       193 ~~~~~~~~~~e~~~~~~~~~~-~------------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~  259 (473)
T PRK10429        193 STIITLRNVHEVYSSDNQVSA-E------------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFT  259 (473)
T ss_pred             HHHHHHcCceecCCccccccc-c------------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEE
Confidence            665666556664322110000 0            001122334566778999988888888887777777666666666


Q ss_pred             hhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh---hc-CCchhHHH
Q psy14136        316 TILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG---YL-GCNVALVL  391 (534)
Q Consensus       316 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~  391 (534)
                      ...+ +....+.+.....++.+++.++.+++.||+|+|+.+          .++.++..++.+.+.   +. +.+.+..+
T Consensus       260 y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (473)
T PRK10429        260 YVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW----------AGASIFPVLSCGVLLLMGLAAPHNALLIV  328 (473)
T ss_pred             EECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----------HHHHHHHHHHHHHHHHHhccCchhHHHHH
Confidence            5433 445556666667788999999999999999998764          222222222222111   11 22344444


Q ss_pred             HHHHHHHHHhhhcccccchhhhccCC-------Cc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        392 ITWFVAVTLITASYAGAMANVVDIGP-------NF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      +..++.+.+.+.......++..|..+       ++ .|..+|...++..++..+++.+.|.+.+.
T Consensus       329 i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~  393 (473)
T PRK10429        329 IAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL  393 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45555566666666666777777643       22 56699999999999999999999998765

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.88  E-value=1.3e-19  Score=184.25  Aligned_cols=368  Identities=13%  Similarity=0.095  Sum_probs=225.9

Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      +++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++++... .+...+.++..+.++|.|.
T Consensus        38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~-~~~~~~~l~l~li~iG~G~  116 (493)
T PRK15462         38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE-IHPSFLYLSLAIIVCGYGL  116 (493)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHhccc
Confidence            36899999999999999999999999999999999 999999999999999987754321 1223344444455566677


Q ss_pred             hhhhHHHHHhcccCCC--cchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCC-
Q psy14136        175 TWPAMYALVGHWIPSN--ERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLK-  250 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~--~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~-  250 (534)
                      ..+...++++|.+|++  +|..+++ .+++.++|..++|.+.+++.+.+|||+.|.+.++..++..+..++..+..++. 
T Consensus       117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~  196 (493)
T PRK15462        117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR  196 (493)
T ss_pred             ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Confidence            7788889999999876  6888899 66888999999999999999999999999987654444333332222111110 


Q ss_pred             --Ccccchhhhhh----------------hh-hccCccccC----------------CCCCcccHHHhhcCHH--HHHHH
Q psy14136        251 --HPRITRKELDY----------------IQ-ENIEPTIVG----------------SKGLKVPWVSILTSPP--AWAIG  293 (534)
Q Consensus       251 --~~~~~~~~~~~----------------~~-~~~~~~~~~----------------~~~~~~~~~~~~~~~~--~~~~~  293 (534)
                        +++..++++..                .. ....+....                ....+.+  +.-|+|-  +..+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~er~r~~~~~~l~  274 (493)
T PRK15462        197 GVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAEN--QKQRKELGLIVTLT  274 (493)
T ss_pred             CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--HHHHhhHHHHHHHH
Confidence              01110001000                00 000000000                0000000  0001111  22222


Q ss_pred             HHHHHHHHHHHHHHhchhhhhHhh-----hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        294 ITTFGRIWVHYIFIIPGPRYMKTI-----LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      +...+....+....+-+..|.++.     +|++ ...+++.++..+..++.+++.+++-.|..+|+. ..+...|  ..+
T Consensus       275 ~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~-~~s~~~K--fa~  350 (493)
T PRK15462        275 FFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR-TVRIWGK--FAL  350 (493)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC-CCCcHHH--HHH
Confidence            333333333333444455555442     2222 235677888888888888888888777744221 1111122  345


Q ss_pred             HHHHHHHHHHHHhhc----C----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHH-HhhhhHH
Q psy14136        369 SQVIPALLVMLIGYL----G----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIH-MTASFLS  438 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~-~~g~~i~  438 (534)
                      ++++.+++++.+...    .    .+.++++...++...+.-+..|...+.+.++.|++ +|+.+|+..... .+|..++
T Consensus       351 g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~  430 (493)
T PRK15462        351 GLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA  430 (493)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555655555444221    1    24566777777777888899999999999999988 999999996643 5666666


Q ss_pred             hHhhhhccccccc-------ChhhHHHHHHHHHHHHHHH
Q psy14136        439 PMVAGYFLQDDET-------SLESWRQVFLIAGAVGSCT  470 (534)
Q Consensus       439 ~~~~g~l~~~~~~-------~~~~~~~~f~~~~~~~~~~  470 (534)
                      ..+.+.......+       ....|...|...+...++.
T Consensus       431 g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  469 (493)
T PRK15462        431 GVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC  469 (493)
T ss_pred             HHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence            6666554321000       1135777777777666554

>KOG2563|consensus

Probab=99.88  E-value=2.2e-21  Score=186.54  Aligned_cols=396  Identities=11%  Similarity=0.061  Sum_probs=280.4

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccC
Q psy14136          9 TDAVPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLE   88 (534)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (534)
                      .|.-++||++++...+-.+.+.+.+..++......                                             
T Consensus        37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~---------------------------------------------   71 (480)
T KOG2563|consen   37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYV---------------------------------------------   71 (480)
T ss_pred             cccchhHhHHHHHHHHHHhcCcchheeehhHHHHH---------------------------------------------
Confidence            35668899999877776676666666665333222                                             


Q ss_pred             CCCCCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH----HHH--HHH
Q psy14136         89 KPNVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL----HYG--ALI  162 (534)
Q Consensus        89 ~P~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~----~~~--~l~  162 (534)
                            ++-|+ +....-|+.-+|++.+....+++-|+.|++|-|..++++..+.++|..+-..+..+    .++  ..+
T Consensus        72 ------~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~  144 (480)
T KOG2563|consen   72 ------NSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTH  144 (480)
T ss_pred             ------HHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhH
Confidence                  33556 77788899999999999999999999999999999999999999999987555333    344  777


Q ss_pred             HHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh------cCCch--hhhhhchhh
Q psy14136        163 ALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH------YGWRS--VFYTTGSLG  233 (534)
Q Consensus       163 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~------~gwr~--~f~i~~~~~  233 (534)
                      .+..+.+.++-+.......+..-|+++++|..+..+- .+..+|.++|.++...+..+      ..|..  .|+..++++
T Consensus       145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~  224 (480)
T KOG2563|consen  145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLA  224 (480)
T ss_pred             HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHH
Confidence            8999999999888888889999999999999999954 67778888888777777654      34655  466555665


Q ss_pred             HHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh
Q psy14136        234 AIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY  313 (534)
Q Consensus       234 li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (534)
                      .+.+++..+..++.|+.++....+...            ..+...+.++.++++++.+..+.+......+++..+.+-.-
T Consensus       225 ~l~l~l~~~~~~~~P~tPps~s~~~~~------------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~  292 (480)
T KOG2563|consen  225 ALLLALVLFVFTKKPPTPPSASQAALQ------------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLA  292 (480)
T ss_pred             HHHHHHHHHhcCCCCCCCCchhHhhhh------------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhc
Confidence            555555666666655554433222211            12245577889999999999999888888888887776655


Q ss_pred             hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH---HHHHhhcCCchhHH
Q psy14136        314 MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL---VMLIGYLGCNVALV  390 (534)
Q Consensus       314 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  390 (534)
                      +.. .|++...+|+......+++++++++.|.+.||.+..+..         +.+.+....++   +..........+.+
T Consensus       293 l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~---------~~v~~~~~~v~~~~l~~~t~~~~~~viv  362 (480)
T KOG2563|consen  293 LCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT---------TLVLYLFALVGTLMLLTCTLFLGDSVIV  362 (480)
T ss_pred             ccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH---------HHHHHHHHHHHHHHHHHhhccCCceEeh
Confidence            554 588888999999999999999999999999998776542         22222222222   22222223244455


Q ss_pred             HHHHHHHHHHhhhcccccchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-HHHHHHHHHHHHH
Q psy14136        391 LITWFVAVTLITASYAGAMANVVD-IGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFLIAGAVGS  468 (534)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~~~~~~~~  468 (534)
                      .......+++.....|...-...| .+|..-++..|+.+..+++.+++-.++.+...+..+.  .+ +...-+.+...++
T Consensus       363 ~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~  440 (480)
T KOG2563|consen  363 FTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGP--PGNTFPANIFLTVSAL  440 (480)
T ss_pred             hhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCC--CCCCccchhHhHHHHH
Confidence            555556666666667766666655 5788888899999999999999999998888776211  12 3333444444444


Q ss_pred             HHHHHHHhhcCC
Q psy14136        469 CTYFFYQVLGTS  480 (534)
Q Consensus       469 ~~~~~~~~~~~~  480 (534)
                      +++++..++++.
T Consensus       441 l~~~lva~~r~~  452 (480)
T KOG2563|consen  441 LGAILVAFFRPD  452 (480)
T ss_pred             HHHHHHhhhhhh
Confidence            445444444443

>PRK09669 putative symporter YagG; Provisional

Probab=99.88  E-value=6.1e-21  Score=196.33  Aligned_cols=325  Identities=11%  Similarity=0.015  Sum_probs=217.3

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCe-ehhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTK-TVFGFSQLVTAICSLLIPQAA----VLHYGALIALR  165 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~~~~i~~~l~~~a~----~~~~~~l~~~r  165 (534)
                      .+++|+++.++|.+.++..+..++..|+.|+++||    +||| +.++.+.+..+++.+++-...    ...+..+++..
T Consensus        37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~  116 (444)
T PRK09669         37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY  116 (444)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence            66899999999999999999999999999999999    7875 456667777777665432221    11245666666


Q ss_pred             HHHhhhhcchhhhHHHHHhccc-CCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-------hcCCchhhhhhchhhHHH
Q psy14136        166 SIQGIASGLTWPAMYALVGHWI-PSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-------HYGWRSVFYTTGSLGAIW  236 (534)
Q Consensus       166 ~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~i~~~~~li~  236 (534)
                      ++.+++.........++.+|+. ++++|.+..+.. .+..+|..+++.+...+..       ..+|+..+.+.++++++.
T Consensus       117 ~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~  196 (444)
T PRK09669        117 ILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL  196 (444)
T ss_pred             HHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence            7777777777777889999998 557899877744 5566666666554433332       347888888888877776


Q ss_pred             HHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHh
Q psy14136        237 CVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKT  316 (534)
Q Consensus       237 ~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  316 (534)
                      .+..++..+|.+++.+    +              ++.+....++.++|||.++.+++..++............+.|.+.
T Consensus       197 ~~~~~~~~~e~~~~~~----~--------------~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~  258 (444)
T PRK09669        197 FFCCFFMTKERYTPEV----D--------------NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNY  258 (444)
T ss_pred             HHHHhCCeEEecCCCC----c--------------CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeee
Confidence            6666666565422210    0              001123456788999999888777766655554444444444443


Q ss_pred             hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH-HHHHHhhcCCchhHHHHHHH
Q psy14136        317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL-LVMLIGYLGCNVALVLITWF  395 (534)
Q Consensus       317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  395 (534)
                      ..+ +....+.+.....+..+++.++.+++.||+|+|+.+          ..+.++..+ .+......+.+.+...+..+
T Consensus       259 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (444)
T PRK09669        259 VLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF----------KWTIVAFVILSALIFFIPPSNVWLIFALNI  327 (444)
T ss_pred             ecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence            333 223334445555677788889999999999988753          222222222 22122222324555566666


Q ss_pred             HHHHHhhhcccccchhhhccCC-------Cc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        396 VAVTLITASYAGAMANVVDIGP-------NF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~p-------~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      +.+++.+...+...+...|..+       ++ .|..+|..+....+|..+++.+.|.+.+.
T Consensus       328 i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~  388 (444)
T PRK09669        328 LFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW  388 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6777777777778888877653       22 57788999999999999999999998875

>TIGR01272 gluP glucose/galactose transporter

Probab=99.87  E-value=2.5e-20  Score=181.26  Aligned_cols=277  Identities=9%  Similarity=0.013  Sum_probs=206.4

Q ss_pred             HHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh---------------
Q psy14136        156 LHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH---------------  219 (534)
Q Consensus       156 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~---------------  219 (534)
                      .+|+.++++-++.|.|.+...+....++++..+++++++.++ .+...++|..++|.+++.+...               
T Consensus         8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~   87 (310)
T TIGR01272         8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAE   87 (310)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHH
Confidence            589999999999999999999999999999999999999999 6689999999999999987731               


Q ss_pred             -cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHH
Q psy14136        220 -YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFG  298 (534)
Q Consensus       220 -~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (534)
                       ..|+++|++.+.+.++..+++.+. + .|+.+++. +++..             .++....++.+++|.++...+..++
T Consensus        88 ~~~~~~~yl~ia~~~~~~~i~~~~~-~-~p~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~f~  151 (310)
T TIGR01272        88 AAKVHTPYLLLAGALAVLAIIFAFL-P-LPELQEAD-VARVS-------------SGDTTQKTSAFQFTHLVLGALGIFV  151 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHc-c-CCCCCccc-ccccc-------------cccccchhhHHhhHHHHHHHHHHHH
Confidence             469999997766655554433322 2 12211110 00000             0000112346778899988888888


Q ss_pred             HHHHHHHHHhchhhhhHhh--hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q psy14136        299 RIWVHYIFIIPGPRYMKTI--LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL  376 (534)
Q Consensus       299 ~~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~  376 (534)
                      +.....++..|.+.|+.+.  +|+++.+.+...+....+.++++++.+++.||+++++.+          .++.++..+.
T Consensus       152 yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l----------~~~~~l~~~~  221 (310)
T TIGR01272       152 YVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL----------AFNAFLAVLL  221 (310)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHH
Confidence            8889999999999999864  689999999999999999999999999999999987753          2333333333


Q ss_pred             HHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhH
Q psy14136        377 VMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESW  456 (534)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~  456 (534)
                      .++....+ .. .......+.+++.+..+|...+...+..|++.+++.++. ....+|+.+.|.+.|.+.|.     .+.
T Consensus       222 ~~l~~~~~-~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~-----~g~  293 (310)
T TIGR01272       222 SIGAALTH-GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC-----LGI  293 (310)
T ss_pred             HHHHHHcC-CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh-----ccc
Confidence            33333333 22 223345566788888888888888888887777777875 56779999999999999998     677


Q ss_pred             HHHHHHHHHH
Q psy14136        457 RQVFLIAGAV  466 (534)
Q Consensus       457 ~~~f~~~~~~  466 (534)
                      +.+|++...+
T Consensus       294 ~~a~~v~~~~  303 (310)
T TIGR01272       294 QLAFALPVPC  303 (310)
T ss_pred             hHHHHHHHHH
Confidence            7777754433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.85  E-value=8.8e-20  Score=186.79  Aligned_cols=327  Identities=18%  Similarity=0.184  Sum_probs=250.9

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhc----ccCCee-hhHHHHHHHHHHHHHHHHH-H-H----HHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ----RFGTKT-VFGFSQLVTAICSLLIPQA-A-V----LHYGALIA  163 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~-~l~~~~~~~~i~~~l~~~a-~-~----~~~~~l~~  163 (534)
                      .+.+|+++..+|.+..+..+-.++..|+.|.++|    |+|||| .++++.+..+++.+++... . .    .....+.+
T Consensus        29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~  108 (428)
T PF13347_consen   29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFV  108 (428)
T ss_pred             HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHH
Confidence            5678999999999999999999999999999999    899655 5667888888877775322 1 0    12344577


Q ss_pred             HHHHHhhhhcchhhhHHHHHhcccC-CCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhc-------CCchhhhhhchhhH
Q psy14136        164 LRSIQGIASGLTWPAMYALVGHWIP-SNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHY-------GWRSVFYTTGSLGA  234 (534)
Q Consensus       164 ~r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~-------gwr~~f~i~~~~~l  234 (534)
                      .-++..++.........++..|..+ +++|.+..+.. .+..+|.++...+.+.+.+..       +|++..++.+++.+
T Consensus       109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~  188 (428)
T PF13347_consen  109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL  188 (428)
T ss_pred             HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence            7777799999999999999999997 46899988854 566677765555555554332       69999999999988


Q ss_pred             HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136        235 IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYM  314 (534)
Q Consensus       235 i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  314 (534)
                      +..++.++..||.+++.+.   +             .++.+.+..++.+++||.++.+.+..++............+.|.
T Consensus       189 v~~~i~~~~~ke~~~~~~~---~-------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~  252 (428)
T PF13347_consen  189 VFFLITFFFVKERSVEVTE---Q-------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYF  252 (428)
T ss_pred             HHhhhhhheeeeccccccc---c-------------ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence            8888888887772111110   0             01133344678899999999999999998888888888888888


Q ss_pred             HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHH
Q psy14136        315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLIT  393 (534)
Q Consensus       315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  393 (534)
                      ++..|.+ ...+.+.....++.+++.++.++++||+|+|+.+          ..+.++.+++.+.+.+.+ .+.+...+.
T Consensus       253 ~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~  321 (428)
T PF13347_consen  253 TYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY----------IIGLLLAALGFLLLFFLGPGSPWLVLIL  321 (428)
T ss_pred             HHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh----------hhhHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            8877777 5567777788899999999999999999999875          455555555555544443 477788888


Q ss_pred             HHHHHHHhhhcccccchhhhccCC--------CchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        394 WFVAVTLITASYAGAMANVVDIGP--------NFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~p--------~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .++.+.+.+..+....+...|+.+        ++.|...|+.++...++..+++.+.+.+.+.
T Consensus       322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~  384 (428)
T PF13347_consen  322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL  384 (428)
T ss_pred             HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence            888888888888888888887654        2269999999999999999999999888765

>PRK09848 glucuronide transporter; Provisional

Probab=99.84  E-value=8.4e-20  Score=188.17  Aligned_cols=324  Identities=10%  Similarity=0.047  Sum_probs=210.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhccc----CCeehh-HHHHHHHHHHHHHHHHHHH------HHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF----GTKTVF-GFSQLVTAICSLLIPQAAV------LHYGALIA  163 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grr~~l-~~~~~~~~i~~~l~~~a~~------~~~~~l~~  163 (534)
                      ++.+|+++.++|.+.+...+..++..++.|+++||.    ||||.. +++.+...+..++. +...      ..+..++.
T Consensus        36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  114 (448)
T PRK09848         36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLV-FWVPTDWSHSSKVVYAYL  114 (448)
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHH-HhCcCCCCcchHHHHHHH
Confidence            668899999999999999999999999999999996    767644 55655555444442 2110      12233444


Q ss_pred             HHHHHhhhhcchhhhHHHHHhcccCC-Ccchhhhhhh-hh-----hhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhH
Q psy14136        164 LRSIQGIASGLTWPAMYALVGHWIPS-NERSRFMSSF-QG-----FSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGA  234 (534)
Q Consensus       164 ~r~l~G~g~g~~~~~~~~~i~~~~~~-~~r~~~~~~~-~~-----~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~l  234 (534)
                      .-++.+++.+...+...++..+..++ ++|.+..+.. .+     ..++..++|.+++......  +|.....+.+++++
T Consensus       115 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~  194 (448)
T PRK09848        115 TYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGM  194 (448)
T ss_pred             HHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence            55677888888888888887777644 6788776543 22     2345555665554332111  12111122233333


Q ss_pred             HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136        235 IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYM  314 (534)
Q Consensus       235 i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  314 (534)
                      +..++.+...||+++.+.                   ++...+..++.+++||.++...+..++............|.|+
T Consensus       195 ~~~~~~~~~~~e~~~~~~-------------------~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~  255 (448)
T PRK09848        195 VLYFICFKSTRENVVRIV-------------------AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYV  255 (448)
T ss_pred             HHHHHHHcCcEeccCCCc-------------------cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeE
Confidence            333333333344322110                   0011223467899999999998888888888888888888898


Q ss_pred             HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHH
Q psy14136        315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLIT  393 (534)
Q Consensus       315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  393 (534)
                      ++.+|.+....++......++.+++.++.+++.||+++|+.+          .++.++..++.+.+.+.+ .+.+.....
T Consensus       256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~----------~~g~~~~~i~~~~~~~~~~~~~~~~~~~  325 (448)
T PRK09848        256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF----------LIGALLGTCGYLLFFWVSVWSLPVALVA  325 (448)
T ss_pred             eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence            888887766555555444667888999999999999988753          344444444444443332 234444444


Q ss_pred             HHHHHHHhhhcccccchhhhccCCC--------chhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        394 WFVAVTLITASYAGAMANVVDIGPN--------FAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~p~--------~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .++.+.+.+...+...+...|..|.        ++|..+|+.++...+|..+++.+.|.+.+.
T Consensus       326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~  388 (448)
T PRK09848        326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL  388 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5556666777777777777666542        259999999999999999999999887654

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.81  E-value=9.4e-18  Score=161.00  Aligned_cols=354  Identities=14%  Similarity=0.054  Sum_probs=259.4

Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcchhhh
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFS-QLVTAICSLLIPQAAV-LHYGALIALRSIQGIASGLTWPA  178 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~-~~~~~i~~~l~~~a~~-~~~~~l~~~r~l~G~g~g~~~~~  178 (534)
                      +.+..|...++..+..++.+|+.|.++|+.|+||..+.. .++..+..++..++.. ..++..++.-.+..++.......
T Consensus        56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf  135 (438)
T COG2270          56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF  135 (438)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence            345678889999999999999999999999977655544 4444444444434432 14566677778888999999999


Q ss_pred             HHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHH--HHh-h---------------hhcCCchhhhhhchhhHHHHHH
Q psy14136        179 MYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLC--GFL-I---------------AHYGWRSVFYTTGSLGAIWCVA  239 (534)
Q Consensus       179 ~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~--~~l-~---------------~~~gwr~~f~i~~~~~li~~i~  239 (534)
                      -.+++.+..++++-++..+ -+....+|+.+.-.+.  ..+ .               +...=|..+.+.++-.++..+.
T Consensus       136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP  215 (438)
T COG2270         136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP  215 (438)
T ss_pred             hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence            9999999999999898888 5566677766544432  111 1               1123577788888888888777


Q ss_pred             hhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC
Q psy14136        240 WWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG  319 (534)
Q Consensus       240 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  319 (534)
                      .++..++.++...+....-....           ++.+..++++.+++.+....+..+...=+...+......|....+|
T Consensus       216 m~~~v~~~~~~~~~~~~~l~~g~-----------k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~g  284 (438)
T COG2270         216 MILNVHDAEKISSPPPTALRNGF-----------KELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLG  284 (438)
T ss_pred             HHhcccccccccccchHHHHHHH-----------HHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC
Confidence            77777776543211100000000           1123356778888888999999999988899999999999998899


Q ss_pred             CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q psy14136        320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVT  399 (534)
Q Consensus       320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (534)
                      ++..+..++.....+..++++++.|++.||++.|+.+          .++.++..+..+...+.. .....++..++.+.
T Consensus       285 ls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl----------~~~lvi~~~~~~~~~~~~-~~~~f~i~gll~g~  353 (438)
T COG2270         285 LSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL----------MIGLVILSIAALYLIFLE-GELDFWILGLLVGT  353 (438)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee----------hHHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999775          334444333333333333 34444455566677


Q ss_pred             HhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        400 LITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       400 ~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      +.|..++..-++..+..|+. .++.+|+++..+.....+||++.+.+.+.  +  +.-+..+....++..++.+..+..+
T Consensus       354 s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i--T--g~~r~g~~~i~vll~iGl~~L~~v~  429 (438)
T COG2270         354 SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI--T--GSSRAGVLSIIVLLLIGLLLLLRVK  429 (438)
T ss_pred             hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH--h--cchhhHHHHHHHHHHhhHhhEEeec
Confidence            77888888888888888865 99999999999999999999999999988  3  4567778887777777777766655


Q ss_pred             CC
Q psy14136        479 TS  480 (534)
Q Consensus       479 ~~  480 (534)
                      .+
T Consensus       430 ~~  431 (438)
T COG2270         430 VP  431 (438)
T ss_pred             CC
Confidence            44

>PRK11462 putative transporter; Provisional

Probab=99.81  E-value=2.4e-18  Score=177.08  Aligned_cols=322  Identities=14%  Similarity=0.045  Sum_probs=205.4

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCee-hhHHHHHHHHHHHHHHHHHHHHH------HHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTKT-VFGFSQLVTAICSLLIPQAAVLH------YGALIA  163 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~~l~~~a~~~~------~~~l~~  163 (534)
                      .+.+|+++..+|.+..+.-+--++.-|+.|.++||    +|||| .++++.+..+++.+++ +.. ++      +..+.+
T Consensus        37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll-f~~-p~~s~~~~~~y~~~  114 (460)
T PRK11462         37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA-YST-PDLSMNGKMIYAAI  114 (460)
T ss_pred             HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH-HhC-CCCCcchHHHHHHH
Confidence            56889999999999999999999999999999996    68765 4556767777776653 221 21      445566


Q ss_pred             HHHHHhhhhcchhhhHHHHHhcccC-CCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-------cCCchhhhhhchhhH
Q psy14136        164 LRSIQGIASGLTWPAMYALVGHWIP-SNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-------YGWRSVFYTTGSLGA  234 (534)
Q Consensus       164 ~r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~i~~~~~l  234 (534)
                      .-++..++..+....-.++..|..+ ++||.+..++. .+..+|..+++.+...+.+.       .+|+....+.+++.+
T Consensus       115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~  194 (460)
T PRK11462        115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF  194 (460)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence            6667788888888888999999986 68899999955 56777777776665444433       257777777777766


Q ss_pred             HHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhh
Q psy14136        235 IWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYM  314 (534)
Q Consensus       235 i~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  314 (534)
                      ++..+++...+|.++.++     +              +.+.+...+..++||.++.+....++..............|.
T Consensus       195 i~~~i~~~~~kE~~~~~~-----~--------------~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~  255 (460)
T PRK11462        195 MMLAFCFFTTKERVEAPP-----T--------------TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYV  255 (460)
T ss_pred             HHHHHHHhcceeccCCCc-----c--------------CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhh
Confidence            666555555455332110     0              011223456788888887776666555555444444444444


Q ss_pred             HhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC-chhHHHHH
Q psy14136        315 KTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC-NVALVLIT  393 (534)
Q Consensus       315 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  393 (534)
                      +...|.+ ...+.+.....++.+++.++++++.||+++|+.+          ..+..+..+..+++.+.+. +.....+.
T Consensus       256 ~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (460)
T PRK11462        256 TWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF----------WWTNALLAVISLAMFFVPMQASITMFVF  324 (460)
T ss_pred             hhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----------HHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence            4444433 3344556677788889999999999999987643          1111111111111222221 22223333


Q ss_pred             HHHHHHHhhhcccccchhhhccCC-------Cc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        394 WFVAVTLITASYAGAMANVVDIGP-------NF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~p-------~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .++.+++.+...+..+....|...       ++ .|..++.......+|..+++.+.|.+.+.
T Consensus       325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~  387 (460)
T PRK11462        325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY  387 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444444444444555555432       22 46667777788999999999988887754

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.80  E-value=6.5e-18  Score=167.40  Aligned_cols=330  Identities=16%  Similarity=0.102  Sum_probs=247.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCe-ehhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTK-TVFGFSQLVTAICSLLIPQAA----VLHYGALIALR  165 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr-~~l~~~~~~~~i~~~l~~~a~----~~~~~~l~~~r  165 (534)
                      .+.+|+++..+|.+..+.-+--++.-|+.|.+.||    +||| +.++++.+-.++.+.++-.+.    ..++...++.-
T Consensus        40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY  119 (467)
T COG2211          40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY  119 (467)
T ss_pred             hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence            66899999999999999999999999999999996    6765 466777788888777752221    01355666777


Q ss_pred             HHHhhhhcchhhhHHHHHhcccC-CCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-------hcCCchhhhhhchhhHHH
Q psy14136        166 SIQGIASGLTWPAMYALVGHWIP-SNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-------HYGWRSVFYTTGSLGAIW  236 (534)
Q Consensus       166 ~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~i~~~~~li~  236 (534)
                      ++.+++.......-.++.++..+ ++||.+..+.. .+.++|..+...+...+..       ..||+..-.+.++++.+.
T Consensus       120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~  199 (467)
T COG2211         120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL  199 (467)
T ss_pred             HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence            88889999888889999999884 57899988855 5566665554444433332       357888888888888888


Q ss_pred             HHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHh
Q psy14136        237 CVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKT  316 (534)
Q Consensus       237 ~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  316 (534)
                      .+.+++..+|.+.+....++.              .+.+.+..+..+++||++...++..++...+..........|.+.
T Consensus       200 ~l~~~~~v~ER~~~~~~~~~~--------------~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y  265 (467)
T COG2211         200 LLFCFFNVKERVVETQPTKTG--------------VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY  265 (467)
T ss_pred             HHHHHHHhhcccCccccCccc--------------ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEE
Confidence            888888888766532211110              012222345568899999999888888888888778888888888


Q ss_pred             hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHH
Q psy14136        317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWF  395 (534)
Q Consensus       317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  395 (534)
                      ..|.+.............+.+++.++..++.+|+|+|+.+          .++.++..+..+.+.+.+ .+....++..+
T Consensus       266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~----------~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~  335 (467)
T COG2211         266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF----------LIGLLLLAVGYLLLYFTPAGSVVLIVVALI  335 (467)
T ss_pred             EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH----------HHHHHHHHHHHHHHHhhcCcchHHHHHHHH
Confidence            8888888887888787888888899999999999999874          444555555555444444 34566666668


Q ss_pred             HHHHHhhhcccccchhhhccC-------CCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        396 VAVTLITASYAGAMANVVDIG-------PNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~-------p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      +.+.+.+...+..++.+.|..       .++ .|...|...++..+|.+++..+.|++.+.
T Consensus       336 i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~  396 (467)
T COG2211         336 IAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA  396 (467)
T ss_pred             HHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888999999998888652       223 78899999999999999999888888765

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.78  E-value=1.6e-16  Score=153.15  Aligned_cols=357  Identities=15%  Similarity=0.102  Sum_probs=255.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-----Ceeh-hHHHHHHHHHHHHHHHHHH----H-------HH--
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-----TKTV-FGFSQLVTAICSLLIPQAA----V-------LH--  157 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~-l~~~~~~~~i~~~l~~~a~----~-------~~--  157 (534)
                      |+++...-.+.+.++..+... ..+.+|+.+|+.+     ||.. +..|.++.+.+..+.+++.    .       +.  
T Consensus         9 EL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~   87 (403)
T PF03209_consen    9 ELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL   87 (403)
T ss_pred             HhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence            889999999999999888764 6889999999998     7754 5556677666666655441    1       11  


Q ss_pred             -HHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhh---hhhchh
Q psy14136        158 -YGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVF---YTTGSL  232 (534)
Q Consensus       158 -~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f---~i~~~~  232 (534)
                       .......-.+.|+|.+.......++++|..|+++|+++.+ +|...-+|.+++..+.+.+.+.+.-.-..   ...+++
T Consensus        88 g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i  167 (403)
T PF03209_consen   88 GLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALI  167 (403)
T ss_pred             HHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence             1234445678899999999999999999999999999999 78888899999999999888776532222   222222


Q ss_pred             hHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhh
Q psy14136        233 GAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPR  312 (534)
Q Consensus       233 ~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (534)
                      .++..++.. +-.|++..+. .+.            .+++.......+++++.+|+...+....++...++..--..+-+
T Consensus       168 ~~~l~~ia~-wg~E~r~~~~-~~~------------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP  233 (403)
T PF03209_consen  168 ALLLNLIAL-WGQEPRRSRR-AAA------------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP  233 (403)
T ss_pred             HHHHHHHHH-HhcccCCccc-ccC------------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence            222222222 2223222111 100            00011333446778888888888888888888888888888889


Q ss_pred             hhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHHHHHHHHHHHHHHHHHH---HhhcCCchh
Q psy14136        313 YMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVFTAISQVIPALLVML---IGYLGCNVA  388 (534)
Q Consensus       313 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  388 (534)
                      |--+++|++..+...+......+.+++..+.|++..| .++++.          ..+++....+++..   .+... +.+
T Consensus       234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~----------a~~G~~~~~~~f~lii~a~~~~-~~~  302 (403)
T PF03209_consen  234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRT----------AALGCLLGALAFALIILAGPLG-SPW  302 (403)
T ss_pred             chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH----------HHHHHHHHHHHHHHHHHHHhcc-cch
Confidence            9999999999999999999999999999999988774 333322          23344443333333   23333 677


Q ss_pred             HHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhcccc----cc-cChhhHHHHHHH
Q psy14136        389 LVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQD----DE-TSLESWRQVFLI  462 (534)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~----~~-~~~~~~~~~f~~  462 (534)
                      .+....++.+++.|.........+.+..+ ++.|..+|.....+.+...++..++|.+.|.    .+ +...+|..+|.+
T Consensus       303 ~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~l  382 (403)
T PF03209_consen  303 LFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFAL  382 (403)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHH
Confidence            77888888888888888888888888775 5599999999999999999999999988874    11 233688888988


Q ss_pred             HHHHHHHHHHHHHhhcC
Q psy14136        463 AGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       463 ~~~~~~~~~~~~~~~~~  479 (534)
                      -+++.++++.+...+.+
T Consensus       383 Ea~ll~~a~~ll~~l~~  399 (403)
T PF03209_consen  383 EAVLLLAALVLLGRLDR  399 (403)
T ss_pred             HHHHHHHHHHHHHHhhh
Confidence            88888877776655433

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG3626|consensus

Probab=99.78  E-value=1.3e-17  Score=171.92  Aligned_cols=259  Identities=15%  Similarity=0.216  Sum_probs=206.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH------------H--------
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA------------A--------  154 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------------~--------  154 (534)
                      ++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|+++++++++++++-            .        
T Consensus       124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~  203 (735)
T KOG3626|consen  124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP  203 (735)
T ss_pred             hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence            77999999999999999999999999999999999999999999999999999997541            0        


Q ss_pred             ---------------------------H-H--HHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhh
Q psy14136        155 ---------------------------V-L--HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFS  203 (534)
Q Consensus       155 ---------------------------~-~--~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~  203 (534)
                                                 . +  -+..++.+.++.|+|....++...+++-|...+++-+..+| +++...
T Consensus       204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~  283 (735)
T KOG3626|consen  204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAI  283 (735)
T ss_pred             ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHH
Confidence                                       0 0  12367789999999999999999999999999999999999 667888


Q ss_pred             hHHHhhhhHHHHhhhhc-------------------CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhh
Q psy14136        204 FGIGLTYPLCGFLIAHY-------------------GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQE  264 (534)
Q Consensus       204 ~G~~~g~~l~~~l~~~~-------------------gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~  264 (534)
                      +|.++|-++++++.+.+                   -|..-|++.+.+.++..+..+++.++.|+..++.+.++.+..++
T Consensus       284 lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~  363 (735)
T KOG3626|consen  284 LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKT  363 (735)
T ss_pred             hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhccccc
Confidence            99999999998887531                   27777888888888888888877666665443322222221111


Q ss_pred             ccC---cccc---CCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHH-HHH
Q psy14136        265 NIE---PTIV---GSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFL-CSY  337 (534)
Q Consensus       265 ~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~-~~~  337 (534)
                      +-.   ....   +.++.+...+++++||.+....+...+....+.++.+++|-|++..+|.+...+..+.....+ +..
T Consensus       364 ~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~  443 (735)
T KOG3626|consen  364 ESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAA  443 (735)
T ss_pred             ccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhh
Confidence            111   0000   012233456788999999999999999999999999999999999999999999998866665 666


Q ss_pred             HHHHHHHHHHHHHhhh
Q psy14136        338 LSSVLFCYLADQLFVR  353 (534)
Q Consensus       338 ~~~~~~g~l~dr~~~~  353 (534)
                      +|.+++|++..|++.+
T Consensus       444 ~Gi~lGG~iikkfkl~  459 (735)
T KOG3626|consen  444 VGIFLGGLIIKKFKLS  459 (735)
T ss_pred             hhhhccceeeeeeccc
Confidence            7888888999987654

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.78  E-value=1.3e-16  Score=156.62  Aligned_cols=376  Identities=16%  Similarity=0.137  Sum_probs=237.9

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      .+|.|+++..-+.+.|..-.-+...++||++||+ |+|+++..|.++.++|.++.+.....+...++++-.+.++|.|..
T Consensus        55 gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~  134 (498)
T COG3104          55 GLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLF  134 (498)
T ss_pred             cCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccc
Confidence            4789999998889988888889999999999996 999999999999999999954431125778889999999999999


Q ss_pred             hhhHHHHHhcccCCCc--chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC---CC-
Q psy14136        176 WPAMYALVGHWIPSNE--RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD---AP-  248 (534)
Q Consensus       176 ~~~~~~~i~~~~~~~~--r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~---~p-  248 (534)
                      -+...+++.|.+|+++  |-..++ .|.+.++|+.++|.+.+++.+++||+..|.+.++-..+.++..++..+.   .+ 
T Consensus       135 K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~  214 (498)
T COG3104         135 KPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGG  214 (498)
T ss_pred             cccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCC
Confidence            9999999999998754  555666 6689999999999999999999999999998877666655544433221   11 


Q ss_pred             --CCCcccchhhhhh-h--------hh----ccCccccC-----------C--CCCcccHHHhhcC-HHHH---HHHHHH
Q psy14136        249 --LKHPRITRKELDY-I--------QE----NIEPTIVG-----------S--KGLKVPWVSILTS-PPAW---AIGITT  296 (534)
Q Consensus       249 --~~~~~~~~~~~~~-~--------~~----~~~~~~~~-----------~--~~~~~~~~~~~~~-~~~~---~~~~~~  296 (534)
                        ++.+. +..+... .        ..    .+..+...           .  -.....+.+...+ ++.+   .+.+..
T Consensus       215 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~  293 (498)
T COG3104         215 VPDPNPL-SFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFA  293 (498)
T ss_pred             CCCccch-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence              11111 1000000 0        00    00000000           0  0000000000011 1222   222222


Q ss_pred             HHHHHHHHHHHhchhhhhHhh-----hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q psy14136        297 FGRIWVHYIFIIPGPRYMKTI-----LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV  371 (534)
Q Consensus       297 ~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~  371 (534)
                      ......+....+-+..|..+.     +|++ ...++..+...+.-++..++..++..|.++++. ......|  ..+++.
T Consensus       294 ~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~-~ps~~~K--FalGl~  369 (498)
T COG3104         294 VIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNK-QPSTPIK--FALGLI  369 (498)
T ss_pred             HHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCC-CCCcchH--HHHHHH
Confidence            222222222233334444332     2222 345778888899999999999999888666532 1111122  344555


Q ss_pred             HHHHHHHHHhhc---------CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136        372 IPALLVMLIGYL---------GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       372 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                      +++.+++++...         ..+.++.+...++..++.-+..|...+.+....|+. .+.+++........|..++..+
T Consensus       370 l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~v  449 (498)
T COG3104         370 LAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQV  449 (498)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhcee
Confidence            555544443332         125677888888888888899999999999999988 8888888887777777777766


Q ss_pred             hhhccccc-ccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        442 AGYFLQDD-ETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       442 ~g~l~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .+.-.+.. ..........|+..+.+.++.....+..
T Consensus       450 a~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~  486 (498)
T COG3104         450 AGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLL  486 (498)
T ss_pred             cccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            65311110 0111455667777777666655554444

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.75  E-value=1e-19  Score=187.99  Aligned_cols=259  Identities=17%  Similarity=0.217  Sum_probs=3.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH------------H--------
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA------------A--------  154 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------------~--------  154 (534)
                      ++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+.+|.++.++|++++++=            .        
T Consensus        30 ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~  109 (539)
T PF03137_consen   30 ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSI  109 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccc
Confidence            77999999999999999999999999999999999999999999999999999986430            0        


Q ss_pred             ----H------------------------HHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhH
Q psy14136        155 ----V------------------------LHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFG  205 (534)
Q Consensus       155 ----~------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G  205 (534)
                          .                        .-+..++++.++.|+|....++...+++=|..++++-+..+| +++...+|
T Consensus       110 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lG  189 (539)
T PF03137_consen  110 SSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILG  189 (539)
T ss_dssp             ------------------------------------------SSS-----------------------------------
T ss_pred             ccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhcc
Confidence                0                        014678889999999999999999999999999999999999 66888899


Q ss_pred             HHhhhhHHHHhhhh---------------------c-CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhh
Q psy14136        206 IGLTYPLCGFLIAH---------------------Y-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQ  263 (534)
Q Consensus       206 ~~~g~~l~~~l~~~---------------------~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~  263 (534)
                      .++|..+++.+.+.                     . .|..-|++.+++.++..+..+++.++-|+..+..+.++.++.+
T Consensus       190 Pa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~  269 (539)
T PF03137_consen  190 PALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERK  269 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcc
Confidence            99998888877643                     1 2777788888888887777777755555542111111110000


Q ss_pred             ------hccCccc------cCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhh
Q psy14136        264 ------ENIEPTI------VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGA  331 (534)
Q Consensus       264 ------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~  331 (534)
                            +...+++      ...+......+++++||.+....+..........++.++.|.|++..++.++.+++++...
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~  349 (539)
T PF03137_consen  270 EEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGI  349 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhh
Confidence                  0000000      1113334456888999999999999999999999999999999999999999999988866


Q ss_pred             HHH-HHHHHHHHHHHHHHHHhhh
Q psy14136        332 PFL-CSYLSSVLFCYLADQLFVR  353 (534)
Q Consensus       332 ~~~-~~~~~~~~~g~l~dr~~~~  353 (534)
                      ..+ +..+|.+++|++.+|++-+
T Consensus       350 v~ip~~~~G~llGG~ivkk~kl~  372 (539)
T PF03137_consen  350 VSIPGAALGILLGGYIVKKFKLS  372 (539)
T ss_dssp             -----------------------
T ss_pred             hhcchhheehheEEEEEEEecCc
Confidence            665 7778999999999998654

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>KOG2325|consensus

Probab=99.70  E-value=2.3e-15  Score=149.71  Aligned_cols=355  Identities=14%  Similarity=0.163  Sum_probs=220.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCC-eehhHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHhhhh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGT-KTVFGFSQLVTAICSLLI-PQAAVL--HYGALIALRSIQGIAS  172 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~i~~~l~-~~a~~~--~~~~l~~~r~l~G~g~  172 (534)
                      |.+.+.+..||+.++..++.+++++..|+...|.+. |+.++.+.++..+|.++. .+...+  .-+.++++|++.|+|.
T Consensus        65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~  144 (488)
T KOG2325|consen   65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV  144 (488)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence            678888999999999999999999999999999997 889999999999999986 333222  4688999999999997


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--cC-----------CchhhhhhchhhHHHHH
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--YG-----------WRSVFYTTGSLGAIWCV  238 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--~g-----------wr~~f~i~~~~~li~~i  238 (534)
                      | ......+++++-...++|.++++ ...+..+|.++||.+...+...  -|           +..+-|+.+++.++..+
T Consensus       145 ~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v  223 (488)
T KOG2325|consen  145 G-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV  223 (488)
T ss_pred             c-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence            6 57889999999998999999999 5567778888888777665432  11           23456777888888888


Q ss_pred             HhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhh
Q psy14136        239 AWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTIL  318 (534)
Q Consensus       239 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  318 (534)
                      ..+++.+|.+++....+.++.++.    +.++++.+..+.++      +..+.+.+..+...+......+..+.+....+
T Consensus       224 ~i~~~f~E~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y  293 (488)
T KOG2325|consen  224 IILFFFKEVYRGIIDKKKRSVEEE----KSDIEKVKKPKLDW------VAVLVCIFLRFVVNFIATTIETLSSALTMVMY  293 (488)
T ss_pred             HHHhheeecccCccccccccchhh----ccchhhhccCChhH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHh
Confidence            888888887655432211111000    00000011111111      23445555556666666666677777777778


Q ss_pred             CCccccchhHh----hhHHHHHHHHHHHHHHHH-HHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH----hhcCC----
Q psy14136        319 GFSIQTNGLLT----GAPFLCSYLSSVLFCYLA-DQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI----GYLGC----  385 (534)
Q Consensus       319 g~s~~~~~~~~----~~~~~~~~~~~~~~g~l~-dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----  385 (534)
                      +++.+++....    ++.++..+...+...... .++.+|+.+          ..+.+....+..+.    .+...    
T Consensus       294 ~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~----------~~g~l~~f~~~~i~~yp~~~~s~pv~~  363 (488)
T KOG2325|consen  294 GWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRII----------LLGFLIFFLSYYIFTYPWGFYSGPVQP  363 (488)
T ss_pred             ccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceee----------eehHHHHHHhhheeeeecccccccccc
Confidence            88776654433    333333333333322222 122223322          12212222222111    11100    


Q ss_pred             -----------ch--------hHHHHHHHHHHHHhhhcccc----cchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhHh
Q psy14136        386 -----------NV--------ALVLITWFVAVTLITASYAG----AMANVVD-IGPNFAGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       386 -----------~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                                 ..        .......+......|...|.    ..+.-++ +-|+++++..|++......+..++|.+
T Consensus       364 ~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~  443 (488)
T KOG2325|consen  364 YNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIF  443 (488)
T ss_pred             ccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHH
Confidence                       00        00111112222233333332    2233344 457779999999999999999999999


Q ss_pred             hhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        442 AGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       442 ~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ...+...     .|++..+.+.....++...++...
T Consensus       444 ~t~~~~~-----~g~~~v~~~~~~~~l~~~~l~~~~  474 (488)
T KOG2325|consen  444 STAIFTL-----SGPRPVWIILLCLLLVVAALWIVF  474 (488)
T ss_pred             HhhhHHh-----cCccHHHHHHHHHHHHHHHHHHHH
Confidence            9888888     778887777666666555554443

>KOG2816|consensus

Probab=99.67  E-value=1e-14  Score=147.18  Aligned_cols=317  Identities=15%  Similarity=0.149  Sum_probs=224.3

Q ss_pred             HHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cchhhhHHHHHhcccC
Q psy14136        111 SFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIAS--GLTWPAMYALVGHWIP  188 (534)
Q Consensus       111 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~--g~~~~~~~~~i~~~~~  188 (534)
                      ...+...+.++..|.++||+|||..+.+..+...+..+...+.   .+|.++    +.|+..  ++......++++|...
T Consensus        70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~---~~~~~~----~~~l~g~~~~~~s~~~a~vadis~  142 (463)
T KOG2816|consen   70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ---GYWFFL----LLGLSGGFSAIFSVGFAYVADISS  142 (463)
T ss_pred             hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH---HHHHhh----hcccccchhhhhhhhhhheeeccc
Confidence            4467778889999999999999999999999999888775443   444444    444433  3457788899999999


Q ss_pred             CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccC
Q psy14136        189 SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIE  267 (534)
Q Consensus       189 ~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  267 (534)
                      .++|....| +.....++..++|.+++.+.+..|.-..|++..+..++..+..++++||+-.++.+.. .+..... ...
T Consensus       143 ~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~~~~-~~~  220 (463)
T KOG2816|consen  143 EEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLRELT-PGS  220 (463)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-ccccccC-CCc
Confidence            999999999 5567999999999999999999999999999999999999988889988755443321 0000000 000


Q ss_pred             ccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHH-HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHH-H
Q psy14136        268 PTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYI-FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFC-Y  345 (534)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~  345 (534)
                      ....+..+.....++.-.+|..+.+++..+.......+ ..-..+.|+...++++..+.+.+.+..+....++.++.. .
T Consensus       221 ~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~  300 (463)
T KOG2816|consen  221 LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPL  300 (463)
T ss_pred             ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00000011111112222345556555555555444433 232557888889999999999999999999999888888 6


Q ss_pred             HHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccC-CCchhHHH
Q psy14136        346 LADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIG-PNFAGPIL  424 (534)
Q Consensus       346 l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~  424 (534)
                      +...++.++.          ...+...-.+....+.+.. +.|..+....+. .......+...+...... ++++|++.
T Consensus       301 l~~~l~~~~~----------i~lGl~~~~~~~~~~af~~-~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~e~g~v~  368 (463)
T KOG2816|consen  301 LSSILGEKRL----------ISLGLLSEFLQLLLFAFAT-ETWMMFAAGVVV-ALAGIVFPAIRAFASILVSPEEQGKVF  368 (463)
T ss_pred             HHHHHhhhhH----------hhHHHHHHHHHHHHHHHhc-cchhhhHHHHHH-HhhcchhHHHHhHHHhhcccccccchh
Confidence            6667777653          4677777777777777776 555444444443 334555666666666655 45699999


Q ss_pred             HHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        425 AFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       425 g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ++...+..+.+.++|.+.+.++..
T Consensus       369 ~~is~i~~l~~~~~~~~~~~i~~~  392 (463)
T KOG2816|consen  369 GIISGIEGLSGVVSPALYGNIFAL  392 (463)
T ss_pred             hHHHHHHHHhhhhhHHHHHHHHHH
Confidence            999999999999999999888654

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.55  E-value=9.7e-14  Score=141.15  Aligned_cols=375  Identities=14%  Similarity=0.132  Sum_probs=216.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccC-----CeehhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFG-----TKTVFGFSQLVTAICSLLIPQAAV--LHYGALIALRSI  167 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~i~~~l~~~a~~--~~~~~l~~~r~l  167 (534)
                      ++++|+++++...+.+...+...+ .++.|.++|.+-     ||+-++++.++.+++.+..+....  .+.....+.-++
T Consensus        17 ~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~l   95 (433)
T PF03092_consen   17 KDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFL   95 (433)
T ss_pred             HHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHH
Confidence            779999999999999999998765 567899999873     555667777777655554433211  256666777788


Q ss_pred             HhhhhcchhhhHHHHHhcccCC--Ccchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhc
Q psy14136        168 QGIASGLTWPAMYALVGHWIPS--NERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLA  244 (534)
Q Consensus       168 ~G~g~g~~~~~~~~~i~~~~~~--~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~  244 (534)
                      ..+|.+....++-+++.|...+  ++|+...+ .+....+|.+++..++|.+.+..++|..|.+.+++.++..+..+++.
T Consensus        96 a~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~  175 (433)
T PF03092_consen   96 ASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLL  175 (433)
T ss_pred             HHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhh
Confidence            8999999999999999999843  33566666 55678899999999999999999999999999888888777777666


Q ss_pred             cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHH-HHHHHHHHHHHHHhchhhhhHhhhC---C
Q psy14136        245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGI-TTFGRIWVHYIFIIPGPRYMKTILG---F  320 (534)
Q Consensus       245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g---~  320 (534)
                      +|.++. +..+....++  +.........++.....++.++.|.+|...+ ..++............-.+..+..+   +
T Consensus       176 ~e~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~f  252 (433)
T PF03092_consen  176 EERKVR-PADEVFSFGK--EEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHF  252 (433)
T ss_pred             hhcccc-ccchhhcccc--cccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccccccc
Confidence            652211 1110000000  0000000001122334566777788776665 2222222111110100011222344   5


Q ss_pred             ccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-C-------chhHHHH
Q psy14136        321 SIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-C-------NVALVLI  392 (534)
Q Consensus       321 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~  392 (534)
                      ++...+.+..+..++.+++..+.    +|+.+++..     |+.+.....+.....+.-+.... .       +.+..+.
T Consensus       253 s~~f~~~~~~vg~~~~l~g~~~y----~~~~~~~~~-----R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lg  323 (433)
T PF03092_consen  253 SPSFYGTLSIVGSIASLLGILLY----RKYFSNWSW-----RRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALG  323 (433)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHH----HHHHhCCCH-----HHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEE
Confidence            66555555544444444444444    444443332     22222222222111111111110 0       1122222


Q ss_pred             HHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc---cChhhHHHHHHHHHHHHH
Q psy14136        393 TWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE---TSLESWRQVFLIAGAVGS  468 (534)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~---~~~~~~~~~f~~~~~~~~  468 (534)
                      -.++........+-.......++.|+. -|+..++...+.++|..++..++..+.+..+   +...+.....++..++.+
T Consensus       324 d~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~l  403 (433)
T PF03092_consen  324 DTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQL  403 (433)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHH
Confidence            333334444444445566777888877 9999999999999999988888877765421   112233444445555554


Q ss_pred             HHHHHHHhhcCCcc
Q psy14136        469 CTYFFYQVLGTSEV  482 (534)
Q Consensus       469 ~~~~~~~~~~~~~~  482 (534)
                      +.+.+..+++++++
T Consensus       404 l~l~ll~lLp~~~~  417 (433)
T PF03092_consen  404 LPLPLLFLLPPQKR  417 (433)
T ss_pred             HHHHHHHHcCCCch
Confidence            44444445555433

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.55  E-value=1.1e-14  Score=124.15  Aligned_cols=137  Identities=25%  Similarity=0.381  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhccc
Q psy14136        108 ILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWI  187 (534)
Q Consensus       108 ~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~  187 (534)
                      +.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.  ++++.+.+.+++.|++.+...+....++.|.+
T Consensus         3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   80 (141)
T TIGR00880         3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--SNITVLIIARFLQGFGAAFALVAGAALIADIY   80 (141)
T ss_pred             EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence            3456778889999999999999999999999999999888775444  68889999999999999999999999999999


Q ss_pred             CCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        188 PSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       188 ~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      |+++|++..+ ......+|..+++.+.+.+.+..+|++.|++.+++.++..+..+++.||
T Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (141)
T TIGR00880        81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE  140 (141)
T ss_pred             ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            9999999999 4578899999999999999998999999999888877776666665544

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.51  E-value=9.3e-13  Score=125.38  Aligned_cols=233  Identities=17%  Similarity=0.173  Sum_probs=166.0

Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      +++|.+..|++.+....+...++.+++.|.++||+|||+..+..+++.+++++..   .+++++.++++|++.|++.+..
T Consensus        62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k---~~~~~~~L~~GRvlgGiaTSLL  138 (354)
T PF05631_consen   62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK---HSSNYPVLLLGRVLGGIATSLL  138 (354)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999999999999998763   3468999999999999999988


Q ss_pred             hhhHHHHHhcccCC-Ccchhhhh-hhh-----hhhhHHHhhhhHHHHhhhhcCC--chhhhhhchhhHHHHHHhhhhccC
Q psy14136        176 WPAMYALVGHWIPS-NERSRFMS-SFQ-----GFSFGIGLTYPLCGFLIAHYGW--RSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       176 ~~~~~~~i~~~~~~-~~r~~~~~-~~~-----~~~~G~~~g~~l~~~l~~~~gw--r~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      ..+--+++..-..+ +.+....+ .+.     ..++-.+++..++.++.+..+.  ..+|....++.++..+++....+|
T Consensus       139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E  218 (354)
T PF05631_consen  139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE  218 (354)
T ss_pred             HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence            88877765433322 21223333 221     1233345555666666666554  788988877777776666655566


Q ss_pred             CCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH-hchhhhhHhhhCCccccc
Q psy14136        247 APLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI-IPGPRYMKTILGFSIQTN  325 (534)
Q Consensus       247 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g~s~~~~  325 (534)
                      ...+..... +..              ++.+..++.+++||+++.+.++..+.-...+.+. .|.|..-.+   -...-.
T Consensus       219 Nyg~~~~~~-~~~--------------~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~---~~~~P~  280 (354)
T PF05631_consen  219 NYGDTSSSS-SLS--------------GSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD---DEELPL  280 (354)
T ss_pred             cCCCccccc-chH--------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC---CCCCCc
Confidence            543321110 000              1112245678889999999999888888877764 567766422   123347


Q ss_pred             hhHhhhHHHHHHHHHHHHHHHHHH
Q psy14136        326 GLLTGAPFLCSYLSSVLFCYLADQ  349 (534)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~l~dr  349 (534)
                      |++++.+.++.++|+-+..++..|
T Consensus       281 GlIFssFM~a~MlGS~lf~~l~s~  304 (354)
T PF05631_consen  281 GLIFSSFMVAMMLGSSLFSRLLSK  304 (354)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhC
Confidence            899999999999999888765554

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.48  E-value=3.8e-13  Score=129.41  Aligned_cols=180  Identities=19%  Similarity=0.244  Sum_probs=153.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136        288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA  367 (534)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~  367 (534)
                      .++...+.+...++.--.+..-.|...++ .++|..+.|.+.+...+..-++.++.|.++||.+.|+.+          .
T Consensus        30 if~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm----------~   98 (448)
T COG2271          30 IFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM----------A   98 (448)
T ss_pred             HHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee----------h
Confidence            34455555666666666666667766665 789999999999999999999999999999999998764          7


Q ss_pred             HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh--hh
Q psy14136        368 ISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA--GY  444 (534)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~--g~  444 (534)
                      +++++.++..+++++.+ +.....+++.+-+.+.+..+|.....+...+|++ ||+..++.++..++|+.+.|.+.  +.
T Consensus        99 ~gLilsai~nil~Gfs~-s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~  177 (448)
T COG2271          99 FGLILSAIVNILFGFSP-SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF  177 (448)
T ss_pred             HHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence            88889999999999988 8888888999999999999999999999988876 99999999999999999999999  88


Q ss_pred             cccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Q psy14136        445 FLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQP  484 (534)
Q Consensus       445 l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  484 (534)
                      +.++     .+|+..|++-+++.++..++.++..+.++++
T Consensus       178 ~~~~-----~~w~~~f~~pgiiaiival~~~~~~rd~Pqs  212 (448)
T COG2271         178 FAFH-----GGWRAAFYFPGIIAIIVALILLFLLRDRPQS  212 (448)
T ss_pred             HHhc-----cchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence            8888     7999999999998888777777766555443

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.47  E-value=2.7e-12  Score=131.75  Aligned_cols=170  Identities=18%  Similarity=0.225  Sum_probs=133.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136        288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA  367 (534)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~  367 (534)
                      .++...+..++.++....+..++|.+.++ +|++..+.+++.+...++..++.++.|++.||+|+|+.+          .
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~----------~   92 (434)
T PRK11663         24 ILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM----------G   92 (434)
T ss_pred             HHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH----------H
Confidence            34445555555555556677788888877 899999999999999999999999999999999998763          5


Q ss_pred             HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136        368 ISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL  446 (534)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~  446 (534)
                      ++.++.+++.++....+ +.+...+..++.+++.+...+.....+.+.+|++ |++++|+.+....+|..++|.+.+.+.
T Consensus        93 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~  171 (434)
T PRK11663         93 IGLIATGIINILFGFSS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA  171 (434)
T ss_pred             HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66666666666666554 5555555555666777777777788888888865 999999999999999999999999998


Q ss_pred             cccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        447 QDDETSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      +.     .+|+..|++.+++.++..+..
T Consensus       172 ~~-----~gw~~~f~~~~i~~~~~~~~~  194 (434)
T PRK11663        172 LH-----YGWRYGMMIAGIIAIVVGLFL  194 (434)
T ss_pred             Hc-----ccHHHHHHHHHHHHHHHHHHH
Confidence            88     799999998887665544433

>PRK10054 putative transporter; Provisional

Probab=99.45  E-value=1.1e-12  Score=132.68  Aligned_cols=173  Identities=15%  Similarity=0.084  Sum_probs=133.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      |.++.+.+..++...+......++|.|+++.+|++..+.++..+...++.++..+..|+++||+|+|+.+          
T Consensus         7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~----------   76 (395)
T PRK10054          7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM----------   76 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH----------
Confidence            4577777888888888888899999999988999999999999999999999999999999999998763          


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      .++.++..+....+.+.+ +.+..++...+.+...+...+....+..|..|++ |+++.|+.+...++|..++|.+.+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l  155 (395)
T PRK10054         77 LLAITAFASGFIAIPLVN-NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL  155 (395)
T ss_pred             HHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455555555555554 4444444444444444455555667777877655 99999999999999999999999988


Q ss_pred             ccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      .+      .+|+..|++.+++.+++.++..+
T Consensus       156 ~~------~g~~~~f~~~~~~~~i~~i~~~~  180 (395)
T PRK10054        156 VM------QSINLPFWLAAICSAFPLVFIQI  180 (395)
T ss_pred             HH------hccCcHHHHHHHHHHHHHHHHHH
Confidence            64      36888998888777766554433

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.43  E-value=9.1e-13  Score=137.34  Aligned_cols=154  Identities=14%  Similarity=0.113  Sum_probs=119.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI-PQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~-~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      ++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+.+ ....+++...+++++++.|++.+..
T Consensus       280 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  359 (490)
T PRK10642        280 NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCF  359 (490)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence            678888888888889999999999999999999999999888876555443332 1222345777888999999888777


Q ss_pred             hhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136        176 WPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH  251 (534)
Q Consensus       176 ~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~  251 (534)
                      ......++.|.+|++.|+++++ .+....+++.++|.+.+++.+.. +|+.++++..+++++..+..+ ++||+|+..
T Consensus       360 ~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~~  436 (490)
T PRK10642        360 TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANRP  436 (490)
T ss_pred             HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCCC
Confidence            7888889999999999999999 56666667788898888888764 478777776666666555444 568887653

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.42  E-value=5e-12  Score=129.04  Aligned_cols=175  Identities=13%  Similarity=0.111  Sum_probs=134.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-hhhcccchhHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-FVRNIMSLTNIRKVF  365 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~  365 (534)
                      +.++.++.......+.++++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |||+.+         
T Consensus         9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i---------   79 (493)
T PRK15462          9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV---------   79 (493)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH---------
Confidence            5677777788888889999999999999988999999999999999999999999999999999 998763         


Q ss_pred             HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCC---chhHHHHHHhHHHHhhhhHHhHhh
Q psy14136        366 TAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPN---FAGPILAFAQTIHMTASFLSPMVA  442 (534)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~g~~~g~~~~~~~~g~~i~~~~~  442 (534)
                       .++.++..++.+++...........+...+...+.+...+...+++.|.+|+   +|.++.++.....++|+.++|.+.
T Consensus        80 -liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~  158 (493)
T PRK15462         80 -MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC  158 (493)
T ss_pred             -HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence             4555555555444433221222233333334455555556667788898874   399999999999999999999999


Q ss_pred             hhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      |++.+.     .+|+..|.+.++.++++++.++.
T Consensus       159 g~L~~~-----~Gw~~~F~iaaigm~l~li~~~~  187 (493)
T PRK15462        159 GYAQEE-----YSWAMGFGLAAVGMIAGLVIFLC  187 (493)
T ss_pred             HHHHhh-----hChHHHHHHHHHHHHHHHHHHHH
Confidence            999888     79999999887766666555544

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.42  E-value=5.4e-12  Score=131.29  Aligned_cols=182  Identities=13%  Similarity=0.074  Sum_probs=137.0

Q ss_pred             HHhhcCH-HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-Hhhhcccch
Q psy14136        281 VSILTSP-PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSL  358 (534)
Q Consensus       281 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~  358 (534)
                      .+.+++| .++..++..++..++++.+..+++.|+++.+|++..+++.+............+++|+++|| +|||+.+  
T Consensus        14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~--   91 (500)
T PRK09584         14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI--   91 (500)
T ss_pred             hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH--
Confidence            3455666 48888888899999999999999999998899999888887777666666666789999999 5998763  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc---hhHHHHHHhHHHHhhh
Q psy14136        359 TNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF---AGPILAFAQTIHMTAS  435 (534)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~g~~~~~~~~g~  435 (534)
                              .++.++..++..++.+.........+...+.+.+.+...+.......+.+|++   +..+.++.++..++|.
T Consensus        92 --------~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~  163 (500)
T PRK09584         92 --------MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGS  163 (500)
T ss_pred             --------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHH
Confidence                    45555555555555554323344444455566667777777778888887643   4567888899999999


Q ss_pred             hHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        436 FLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       436 ~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .++|.+.|++.+.     .+|+..|++.++..+++.+.++..
T Consensus       164 ~~gp~i~g~l~~~-----~g~~~~F~i~~i~~~i~~i~~~~~  200 (500)
T PRK09584        164 FFSMLATPWLAAK-----YGWSVAFALSVVGMLITVVNFAFC  200 (500)
T ss_pred             HHHHHHHHHHHHh-----hCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999988     799999999887666665554443

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.41  E-value=4.7e-12  Score=130.98  Aligned_cols=177  Identities=14%  Similarity=0.081  Sum_probs=141.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhh--hCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTI--LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRK  363 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~  363 (534)
                      +.++.+.+..++..+++++...++|.|+++.  +|++..+++.+.+...++..++.+++|+++|| +|||+.+       
T Consensus        10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l-------   82 (475)
T TIGR00924        10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM-------   82 (475)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH-------
Confidence            4566777777888899999999999999887  89999999999999999999999999999999 7998763       


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCC----chhHHHHHHhHHHHhhhhHHh
Q psy14136        364 VFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPN----FAGPILAFAQTIHMTASFLSP  439 (534)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~g~~~g~~~~~~~~g~~i~~  439 (534)
                         .++.++.+++..++...+ +.+...+...+.+.+.+...+.......+..|+    +|+++.++.+...++|..+||
T Consensus        83 ---~~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~  158 (475)
T TIGR00924        83 ---VLGGIVLMLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISP  158 (475)
T ss_pred             ---HHHHHHHHHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHH
Confidence               566666666666666554 444455555566666777777777888777753    288899999999999999999


Q ss_pred             HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+.+++.+.     .+|+..|++.++.++++.+.++..++
T Consensus       159 ~l~g~l~~~-----~g~~~~f~~~~~~~~~~~l~~~~~~~  193 (475)
T TIGR00924       159 LLAGVIAEN-----YGYHVGFNLAAVGMVIGLLTFFAGRH  193 (475)
T ss_pred             HHHHHHHHh-----cChHHHHHHHHHHHHHHHHHHHHccc
Confidence            999999988     78999999988766666555444443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00889 2A0110 nucleoside transporter

Probab=99.41  E-value=1.2e-12  Score=133.45  Aligned_cols=147  Identities=18%  Similarity=0.193  Sum_probs=126.1

Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcchhhh
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV--LHYGALIALRSIQGIASGLTWPA  178 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~--~~~~~l~~~r~l~G~g~g~~~~~  178 (534)
                      +..+.+.+.++..++..++.++.|+++||+|||+++..+.++.+++..+......  .+++.+++.+++.|++.+...+.
T Consensus       249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~  328 (418)
T TIGR00889       249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS  328 (418)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            3467799999999999999999999999999999999999998888766544211  13466778899999999988999


Q ss_pred             HHHHHhcccCCCcchhhhhhh--hhhhhHHHhhhhHHHHhhhh------cCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        179 MYALVGHWIPSNERSRFMSSF--QGFSFGIGLTYPLCGFLIAH------YGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       179 ~~~~i~~~~~~~~r~~~~~~~--~~~~~G~~~g~~l~~~l~~~------~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      ...++.|++|+++|+++.++.  ...++|.++||+++|++.++      +||+.+|++.+++.++..++.+++.+|+
T Consensus       329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~  405 (418)
T TIGR00889       329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS  405 (418)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999999999955  35789999999999999987      4699999999988888888888888765

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.38  E-value=8.5e-12  Score=124.15  Aligned_cols=165  Identities=25%  Similarity=0.311  Sum_probs=132.2

Q ss_pred             HHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q psy14136        294 ITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIP  373 (534)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~  373 (534)
                      +..++...........+|.++.+.+|.+..+.+++.+...++..++.++.|+++||+|||+.+          .++.++.
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l----------~~~~~~~   72 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL----------IIGLLLF   72 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH----------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE----------eehhhhh
Confidence            445555666666667777566666899999999999999999999999999999999998753          4555555


Q ss_pred             HHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCC-chhHHHHHHhHHHHhhhhHHhHhhhhcccccccC
Q psy14136        374 ALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPN-FAGPILAFAQTIHMTASFLSPMVAGYFLQDDETS  452 (534)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~  452 (534)
                      +++.+...+.+ +.+..++..++.+.+.+...+....++.+..|+ +|++++++.+....+|..++|.+.+.+.+.    
T Consensus        73 ~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----  147 (352)
T PF07690_consen   73 ALGSLLLAFAS-NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY----  147 (352)
T ss_dssp             HHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----
T ss_pred             hhHHHHhhhhh-hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc----
Confidence            55533333334 555777777888888888889999999999987 599999999999999999999999999987    


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHH
Q psy14136        453 LESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       453 ~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                       .+|+..|++.+++.++..++.
T Consensus       148 -~~~~~~~~~~~~~~~~~~il~  168 (352)
T PF07690_consen  148 -FGWRWAFLISAILSLIAAILF  168 (352)
T ss_dssp             -CHHCCHHHHHHHHHHHHHHHH
T ss_pred             -cccccccccccchhhhhhhhH
Confidence             789999999998888877643

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.37  E-value=4.9e-12  Score=127.80  Aligned_cols=156  Identities=17%  Similarity=0.207  Sum_probs=125.7

Q ss_pred             HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG  384 (534)
Q Consensus       305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (534)
                      .+....|. +++.+|.+..+.+++.+...++..++.++.|++.||+|||+.+          ..+.++..+......+.+
T Consensus        12 ~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~~~~~~~~~~~~~~~   80 (399)
T TIGR00893        12 NLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL----------AVFIVIWGVFTGLQAFAG   80 (399)
T ss_pred             hhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee----------HHHHHHHHHHHHHHHHHc
Confidence            33444455 5555899999999999999999999999999999999999875          445555555555555555


Q ss_pred             CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136        385 CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA  463 (534)
Q Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~  463 (534)
                       +.+...+..++.+++.+...+....++.|..|++ |++++++.+....+|..++|.+.+.+.+.     .+|+..|++.
T Consensus        81 -~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~~~  154 (399)
T TIGR00893        81 -AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-----FSWQWAFIIE  154 (399)
T ss_pred             -CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-----CCchHHHHHH
Confidence             6777777777888888888888888999999865 99999999999999999999999998888     7899999988


Q ss_pred             HHHHHHHHHHHHhh
Q psy14136        464 GAVGSCTYFFYQVL  477 (534)
Q Consensus       464 ~~~~~~~~~~~~~~  477 (534)
                      +++.++..+..++.
T Consensus       155 ~~~~~~~~~~~~~~  168 (399)
T TIGR00893       155 GVLGIIWGVLWLKF  168 (399)
T ss_pred             HHHHHHHHHHhhhe
Confidence            87776665555444

>KOG3762|consensus

Probab=99.37  E-value=2.1e-11  Score=120.26  Aligned_cols=182  Identities=14%  Similarity=0.055  Sum_probs=145.6

Q ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHH
Q psy14136        282 SILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNI  361 (534)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~  361 (534)
                      +++.++...++.+......++...+.+++=-++++ .+..+...|......-.+.++.-++.+++.+|+|+-+++     
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~-----  439 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM-----  439 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence            45667776666666666666666666666556776 676667778777777888999999999999999998875     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHH-HhhhhHHh
Q psy14136        362 RKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIH-MTASFLSP  439 (534)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~-~~g~~i~~  439 (534)
                           .+++.+..+-++.+.+.. ++|..+..-++-+...+..+....+++....|++ +.++.|+..... .+|-.+|.
T Consensus       440 -----~lgLa~~~~Rf~~~S~L~-n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs  513 (618)
T KOG3762|consen  440 -----YLGLACNVGRFLYYSYLQ-NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS  513 (618)
T ss_pred             -----eehhhHHHHHHHHHHHhc-CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence                 566667777777777777 8888888889999999999999999999999988 999999998775 57889999


Q ss_pred             HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      +++|.+.+.     .+-+..|...++.+++.++....+.+.
T Consensus       514 lIGG~~v~~-----fg~~ttf~~~giAcl~~l~~~~~iq~~  549 (618)
T KOG3762|consen  514 LIGGFVVER-----FGARTTFRIFGIACLVTLALFISIQLL  549 (618)
T ss_pred             hhhhhhhee-----ehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999999998     788888888888777776666655443

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.36  E-value=2.5e-12  Score=131.58  Aligned_cols=148  Identities=12%  Similarity=0.100  Sum_probs=127.1

Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhh
Q psy14136         98 FDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWP  177 (534)
Q Consensus        98 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~  177 (534)
                      .+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.+++  ++.+.+++.+++.|++.+...+
T Consensus       257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~--~~~~~~~~~~~l~g~~~~~~~~  334 (420)
T PRK09528        257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA--TGPLEVSILKLLHAFEVPFLLV  334 (420)
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHH
Confidence            35667789999999999999999999999999999999999999988887775554  5788888999999999888888


Q ss_pred             hHHHHHhcccCCCcchhhhhh-h-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        178 AMYALVGHWIPSNERSRFMSS-F-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       178 ~~~~~i~~~~~~~~r~~~~~~-~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      ....++.+.+|++.|+...+. + ....+|.++++++.|++.+.+|||..|++.+++.++..++.++..+++
T Consensus       335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~  406 (420)
T PRK09528        335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD  406 (420)
T ss_pred             HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            888999999999999887663 3 567899999999999999999999999998888877766666665543

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.36  E-value=2.1e-11  Score=123.66  Aligned_cols=168  Identities=10%  Similarity=0.068  Sum_probs=134.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136        290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~  369 (534)
                      +.+....++...+.+.+..++|.|+++.+|++..+.|+..+...+...+..++.|+++||+++|+.+          ..+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l----------~~~   82 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI----------VTG   82 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH----------HHH
Confidence            4555677777788888888999999888999999999999999999999999999999999998763          455


Q ss_pred             HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ..+.++..+.....+ +.+...+..++.+++.+...+...+.+.+..|++ |+++.|+.+....+|..+||.+.|.+. .
T Consensus        83 ~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~  160 (400)
T PRK11646         83 MLMRAAGFATMAIAH-EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q  160 (400)
T ss_pred             HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence            666666666665554 6666666666666666666677777788887755 999999999999999999999999998 5


Q ss_pred             cccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        449 DETSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       449 ~~~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                           .+|+..|++.+.+.++..++.
T Consensus       161 -----~g~~~~f~~~~~~~~~~~i~~  181 (400)
T PRK11646        161 -----YDFRLVCATGAVLFVLAAAFN  181 (400)
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHH
Confidence                 689999998877766655443

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.35  E-value=5.3e-12  Score=126.90  Aligned_cols=164  Identities=17%  Similarity=0.215  Sum_probs=126.4

Q ss_pred             HHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q psy14136        297 FGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALL  376 (534)
Q Consensus       297 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~  376 (534)
                      ++.......+....|.+ ++.+|.+..+.+++.+...++..++.++.|+++||+|||+.+          .++.++.+++
T Consensus         5 ~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~   73 (379)
T TIGR00881         5 AAYYLVRKNFALAMPYL-VEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL----------PIGLILCAIV   73 (379)
T ss_pred             hHHHHhHHhhhhhhHHH-HHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh----------HHHHHHHHHH
Confidence            34444555555666654 455899999999999999999999999999999999999874          4555566666


Q ss_pred             HHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHh-HhhhhcccccccChh
Q psy14136        377 VMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSP-MVAGYFLQDDETSLE  454 (534)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~-~~~g~l~~~~~~~~~  454 (534)
                      .++..+.+ +.+..++..++.+++.+...+....++.+..|++ |+++.++.+....+|..++| .+.+.+.+.     .
T Consensus        74 ~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~  147 (379)
T TIGR00881        74 NLFFGFST-SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-----Y  147 (379)
T ss_pred             HHHHHHhh-hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----C
Confidence            66666655 6666677777777777888888888999988865 99999999999999999999 455556566     6


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        455 SWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       455 ~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +|+..|++.+++.++..+..+..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~  170 (379)
T TIGR00881       148 SWHWVFIVPGIIAIIVSLICFLL  170 (379)
T ss_pred             CchhHHHHHHHHHHHHHHHHhee
Confidence            89999888887766655544443

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.35  E-value=9.1e-12  Score=127.27  Aligned_cols=184  Identities=13%  Similarity=0.025  Sum_probs=136.3

Q ss_pred             cHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccch
Q psy14136        279 PWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSL  358 (534)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~  358 (534)
                      +++.+.++|.++...+..++..+........+|.+.++ .+.++.+.+++.+...++..++.++.|+++||++||+.+. 
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~-   86 (417)
T PRK10489          9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLIL-   86 (417)
T ss_pred             HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEE-
Confidence            44556677888887777777777777778888888877 6779999999999999999999999999999999998762 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH---hh-cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHh
Q psy14136        359 TNIRKVFTAISQVIPALLVMLI---GY-LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMT  433 (534)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~  433 (534)
                               .+..+.++.....   .+ ...+.+...+..++.+++.+...+.....+.+..|++ |+++.++.+....+
T Consensus        87 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (417)
T PRK10489         87 ---------LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRL  157 (417)
T ss_pred             ---------ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhH
Confidence                     2222222222211   11 1224445555555556666666666677777877765 99999999999999


Q ss_pred             hhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        434 ASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       434 g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      |..+||.+.|.+.+.     .+|++.+++.++..+++.++.+.++
T Consensus       158 g~~~g~~l~g~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~  197 (417)
T PRK10489        158 GSVISPALGGLLIAA-----GGVAWNYGLAAAGTFITLLPLLRLP  197 (417)
T ss_pred             HHHhHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999988     7888888887777666655554443

>PRK10504 putative transporter; Provisional

Probab=99.34  E-value=3.1e-11  Score=125.48  Aligned_cols=174  Identities=20%  Similarity=0.184  Sum_probs=139.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +.+|.+.+..++.......+..++|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+          
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------   78 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF----------   78 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH----------
Confidence            467778888888888888888899999887 899999999999888899999999999999999998763          


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      ..+..+.+++.+...+.+ +.+..++..++.+++.+...+.....+.+..|++ |+++.|+.+....+|..++|.+.|.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l  157 (471)
T PRK10504         79 FTAIVLFTLGSLFCALSG-TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL  157 (471)
T ss_pred             HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            344444444444444444 6666667777777777777777788888888866 99999999999999999999999999


Q ss_pred             ccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .+.     .+|+..|++...+..++.+.....
T Consensus       158 ~~~-----~gw~~~f~~~~~~~~l~~~~~~~~  184 (471)
T PRK10504        158 VEY-----ASWHWIFLINIPVGIIGAIATLML  184 (471)
T ss_pred             Hhh-----ccHHHHHHHHHHHHHHHHHHHHHh
Confidence            998     789999998877766665555443

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.34  E-value=3.1e-11  Score=124.96  Aligned_cols=177  Identities=14%  Similarity=0.051  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVF  365 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~  365 (534)
                      |.++.+++..+...+++++...+++.|+++.+|++..+++++.........+..+++|+++|| +|||+.+         
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~---------   84 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI---------   84 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH---------
Confidence            567777788888899999999999999999899999999888888888888888999999999 9999874         


Q ss_pred             HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc---hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136        366 TAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF---AGPILAFAQTIHMTASFLSPMVA  442 (534)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~g~~~~~~~~g~~i~~~~~  442 (534)
                       .++.++..++.+...+........++...+.+.+.+...+...+.+.|.+|++   |+.++++.....++|..++|.+.
T Consensus        85 -~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~  163 (489)
T PRK10207         85 -VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA  163 (489)
T ss_pred             -HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence             55666666655555554322333334555666777777788888888988644   47789999999999999999999


Q ss_pred             hhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      |++.+.     .||+..|++.++..+++.+.+...+
T Consensus       164 g~l~~~-----~gw~~~F~i~~i~~~~~~~~~~~~~  194 (489)
T PRK10207        164 PVIADK-----FGYSVTYNLCGAGLIIALLVYFACR  194 (489)
T ss_pred             HHHHHh-----hChHHHHHHHHHHHHHHHHHHHHcc
Confidence            999998     7899999987665555554444443

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.33  E-value=2e-11  Score=122.09  Aligned_cols=170  Identities=14%  Similarity=0.063  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q psy14136        292 IGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQV  371 (534)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~  371 (534)
                      +.+..++...........+|.|..+ .+.+..+.+++.+...++..++.++.|+++||+|||+.+          ..+.+
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~----------~~~~~   72 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM----------IGADL   72 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH----------HHHHH
Confidence            4455566666666677778888887 789999999999999999999999999999999998764          33333


Q ss_pred             HHHHHHHHHhhcC----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136        372 IPALLVMLIGYLG----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL  446 (534)
Q Consensus       372 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~  446 (534)
                      +..+.........    .+.+...+..++.+++.+...+....++.|..|++ |+++.|+.+....+|..++|.+.+.+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~  152 (365)
T TIGR00900        73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY  152 (365)
T ss_pred             HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            3333333222221    14556666677777777888888888999998866 999999999999999999999999998


Q ss_pred             cccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        447 QDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +.     .+|+..|++.++..+++.+..+..
T Consensus       153 ~~-----~g~~~~~~~~~~~~~~~~~~~~~~  178 (365)
T TIGR00900       153 AT-----LGIKWAIWVDAVGFAISALLIVSV  178 (365)
T ss_pred             HH-----hhHHHHHHHHHHHHHHHHHHHHhc
Confidence            88     789999988877666655544443

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.32  E-value=2.8e-11  Score=122.11  Aligned_cols=170  Identities=18%  Similarity=0.174  Sum_probs=130.3

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ  370 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~  370 (534)
                      ......+.............|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+          ..+.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~----------~~~~   77 (385)
T TIGR00710         9 LLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL----------LLGL   77 (385)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHHH
Confidence            33333444444555555666766555 899999999999999999999999999999999998763          4555


Q ss_pred             HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc
Q psy14136        371 VIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD  449 (534)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~  449 (534)
                      ++..+........+ +.+...+..++.+++.+...+....++.|..|++ |+++.|+.+....+|..++|.+.+.+.+. 
T Consensus        78 ~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-  155 (385)
T TIGR00710        78 FIFALSSLGLALSN-NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVW-  155 (385)
T ss_pred             HHHHHHHHHHHHHc-cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            55555555555554 6666666667777777777777888888988866 99999999999999999999999999888 


Q ss_pred             ccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        450 ETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                          .+|+..+++.+++.++..+.....
T Consensus       156 ----~~~~~~~~~~~~~~~~~~~~~~~~  179 (385)
T TIGR00710       156 ----LSWHAIFAFLSLAGILLSALIFFI  179 (385)
T ss_pred             ----cCHHHHHHHHHHHHHHHHHHHHHh
Confidence                789999988887766665554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.32  E-value=4.2e-12  Score=132.90  Aligned_cols=141  Identities=14%  Similarity=0.137  Sum_probs=110.6

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.++.......+.+.+.+..++.++....
T Consensus       303 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (496)
T PRK03893        303 KTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQG  382 (496)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcc
Confidence            34789999999999999999999999999999999999999988877766665443222223444454555555544444


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHH
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAI  235 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li  235 (534)
                      ..+...+++.|.+|+++|++.++ .+....+|..+||.+++.+.+.+||+..+++.+....+
T Consensus       383 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~  444 (496)
T PRK03893        383 ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF  444 (496)
T ss_pred             cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence            56677789999999999999999 45778899999999999999999999888666544433

>PRK03699 putative transporter; Provisional

Probab=99.31  E-value=1.5e-10  Score=117.41  Aligned_cols=172  Identities=13%  Similarity=0.127  Sum_probs=129.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +.++...+..++.......+...+|.+.++ +|+|..+.+++.+...++..++.++.|++.||+|||+.+          
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~----------   75 (394)
T PRK03699          7 KLTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL----------   75 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH----------
Confidence            345555556666655566666777887665 899999999999999999999999999999999999763          


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      ..+.++..+......+.+ +.+...+..++.+.+.+...+.....+.+..|++ |+.+.+..+....+++.++|.+.+.+
T Consensus        76 ~~~~~~~~i~~~l~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  154 (394)
T PRK03699         76 IFGFALMILAVAGLMFSH-SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL  154 (394)
T ss_pred             HHHHHHHHHHHHHHHHcc-hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444455555555555554 5666666666777777777777777888888865 99999999888889999999998887


Q ss_pred             ccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        446 LQDDETSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      .+.  .  .+|+..|.+.+++.++..++.
T Consensus       155 ~~~--~--~gw~~~f~~~~~~~~~~~~~~  179 (394)
T PRK03699        155 LAR--S--IEWYWVYACIGLVYVAIFILT  179 (394)
T ss_pred             Hhc--c--ccHHHHHHHHHHHHHHHHHHH
Confidence            654  1  689999998887766554443

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.31  E-value=1.1e-11  Score=125.98  Aligned_cols=142  Identities=20%  Similarity=0.297  Sum_probs=120.3

Q ss_pred             hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHH
Q psy14136        104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV  183 (534)
Q Consensus       104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i  183 (534)
                      +.++..+.+.++..++.++.|++.||+|||+.+..+.++.+++.++..+  .++.+.+++.+++.|++.+...+.....+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~G~~~~~~~~~~~~~~  327 (399)
T PRK05122        250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL--APSPWMALIGAALTGFGFSLVFPALGVEA  327 (399)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            4567778889999999999999999999999999988888887766444  35777788899999999998888888888


Q ss_pred             hcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        184 GHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       184 ~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      .|.+|+++|+++.+++ ....+|..+++++.+.+.++.||+..|++.+++.++..++.+++.+++
T Consensus       328 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (399)
T PRK05122        328 VKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRA  392 (399)
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999999999999955 678899999999999999999999999998888887766666554433

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.31  E-value=7.7e-12  Score=129.65  Aligned_cols=148  Identities=9%  Similarity=-0.051  Sum_probs=112.6

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|+|..+.++..+.+.++..++.+++|+++||+|||+.+.....+..++..+..+...++...+.+.+++.|++...
T Consensus       286 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~  365 (467)
T PRK09556        286 FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFG  365 (467)
T ss_pred             HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Confidence            34789999999999999999999999999999999999998776655444433232233223566667788888865444


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh-hhhhh-HHHhhhhHHHHhhh------------hcCCchhhhhhchhhHHHHHHh
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSF-GIGLTYPLCGFLIA------------HYGWRSVFYTTGSLGAIWCVAW  240 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~-G~~~g~~l~~~l~~------------~~gwr~~f~i~~~~~li~~i~~  240 (534)
                      ........+.|.+|+++|+++.|+. ...++ |..++|.+.|++.+            ..||+..|++.++..++..+..
T Consensus       366 ~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  445 (467)
T PRK09556        366 PQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM  445 (467)
T ss_pred             HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence            4444456777999999999999954 66665 77999999999998            5789999998877777665554


Q ss_pred             hh
Q psy14136        241 WF  242 (534)
Q Consensus       241 ~~  242 (534)
                      ++
T Consensus       446 ~~  447 (467)
T PRK09556        446 AI  447 (467)
T ss_pred             HH
Confidence            43

>TIGR00895 2A0115 benzoate transport

Probab=99.31  E-value=5.7e-12  Score=127.65  Aligned_cols=168  Identities=17%  Similarity=0.218  Sum_probs=126.0

Q ss_pred             HHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q psy14136        295 TTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPA  374 (534)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~  374 (534)
                      ..+.............|.+.++ +|.+..+.+++.+...++.+++.++.|++.||++||+.+          ..+.++..
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~   93 (398)
T TIGR00895        25 IMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL----------LWSILLFS   93 (398)
T ss_pred             HHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH----------HHHHHHHH
Confidence            3333334444555566666555 899999999999999999999999999999999998763          34445555


Q ss_pred             HHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccCh
Q psy14136        375 LLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSL  453 (534)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~  453 (534)
                      ++.......+ +.+...+..++.+++.+...+....++.|..|++ |++++++.+....+|..+++.+.+.+.+.     
T Consensus        94 ~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----  167 (398)
T TIGR00895        94 VFTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-----  167 (398)
T ss_pred             HHHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-----
Confidence            5555555554 6666666667777777777888888899998865 99999999999999999999999999888     


Q ss_pred             hhHHHHHHHHHHHHHHHHHHH-HhhcC
Q psy14136        454 ESWRQVFLIAGAVGSCTYFFY-QVLGT  479 (534)
Q Consensus       454 ~~~~~~f~~~~~~~~~~~~~~-~~~~~  479 (534)
                      .+|+..+++.+++.++..++. ..+++
T Consensus       168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~  194 (398)
T TIGR00895       168 FGWRSLFYVGGIAPLLLLLLLMRFLPE  194 (398)
T ss_pred             ccceeehhhhhhHHHHHHHHHHHhCCC
Confidence            789888888765554444443 33344

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.31  E-value=3.2e-11  Score=122.53  Aligned_cols=176  Identities=13%  Similarity=0.144  Sum_probs=131.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      +....+..+...+.........|.+.+ .+|.+..+.+++.+...++..++.++.|++.||+|||+.+          .+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~----------~~   82 (405)
T TIGR00891        14 FSAAWLGWLLDAFDFFLVALVLAEVAG-EFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM----------VT   82 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HH
Confidence            445555555666666666666676554 5899999999999999999999999999999999998764          44


Q ss_pred             HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136        369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ  447 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~  447 (534)
                      +.++.++..+...+.+ +.+......++.+.+.+...+....++.|..|++ |+++.++.+....+|..+++.+.+.+.+
T Consensus        83 ~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~  161 (405)
T TIGR00891        83 SIVLFSAGTLACGFAP-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP  161 (405)
T ss_pred             HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555555555555555 6666667777777777777787888888888755 9999999999999999999999998887


Q ss_pred             ccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        448 DDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .  .+ .+|+..|++.++..++..+.....++
T Consensus       162 ~--~~-~~w~~~f~~~~~~~~~~~~~~~~~~~  190 (405)
T TIGR00891       162 V--WG-DGWRALFFISILPIIFALWLRKNIPE  190 (405)
T ss_pred             h--cC-ccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            6  11 24999888766555554443333333

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.30  E-value=8.9e-11  Score=121.81  Aligned_cols=171  Identities=13%  Similarity=0.060  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q psy14136        296 TFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL  375 (534)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~  375 (534)
                      .++.....+....+.|.+. +.+|++..+.+++.+...++..++.++.|+++||+|+|+.+          ..+.++.++
T Consensus        45 ~~~~~~~~~~~~~~~~~l~-~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~----------~~~~~~~~~  113 (476)
T PLN00028         45 FFTCFVSTFAAAPLLPIIR-DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS----------AFLLMLTAP  113 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHH
Confidence            3333333444444555554 45899999999998888899999999999999999998753          344455555


Q ss_pred             HHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc----ccc
Q psy14136        376 LVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ----DDE  450 (534)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~----~~~  450 (534)
                      ..++..+.. +....++..++.+++.+... ....++.+.+|++ ||+++|+.+...++|..+++.+.+.+..    ...
T Consensus       114 ~~~~~~~~~-s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~  191 (476)
T PLN00028        114 AVFCMSLVS-SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA  191 (476)
T ss_pred             HHHHHHHhc-CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            555555554 55555444455555544332 3344567888755 9999999998888888887776655432    100


Q ss_pred             cChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        451 TSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       451 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+..+|+..|++.+++.++..++.+++++
T Consensus       192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~  220 (476)
T PLN00028        192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQ  220 (476)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence            11248999999988887766666555543

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.30  E-value=6.2e-11  Score=119.61  Aligned_cols=171  Identities=13%  Similarity=0.113  Sum_probs=137.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +.++.+.+..++...........+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+          
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------   71 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL----------   71 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH----------
Confidence            456677777777777777888888887665 899999999999999999999999999999999998764          


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      ..+..+.++..+...+.+ +.+..++..++.+++.+...+.......+..|++ |++++++......++..++|.+.+.+
T Consensus        72 ~~~~~~~~~~~~l~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l  150 (382)
T PRK10091         72 LFLVALCVIGNAMFTLSS-SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL  150 (382)
T ss_pred             HHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence            456666666666666665 6777777777777777766666667777888765 99999999999999999999999998


Q ss_pred             ccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        446 LQDDETSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      .+.     .+|+..|++.+++.++..+..
T Consensus       151 ~~~-----~gwr~~f~~~~~~~~~~~~~~  174 (382)
T PRK10091        151 SQE-----FSWRYTFLLIAVFNIAVLASI  174 (382)
T ss_pred             hhh-----ccHHHHHHHHHHHHHHHHHHH
Confidence            887     789999999887766555443

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.30  E-value=8.5e-11  Score=120.86  Aligned_cols=175  Identities=14%  Similarity=0.201  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +.++...+.....+.....+....| ++++ .|.++.+.++..+...++..++.++.|++.||++||+.+          
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~----------   94 (438)
T TIGR00712        27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL----------   94 (438)
T ss_pred             HHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh----------
Confidence            3444444444444444444455555 4555 599999999999999999999999999999999998764          


Q ss_pred             HHHHHHHHHHHHHHhhcC---CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136        367 AISQVIPALLVMLIGYLG---CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA  442 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~  442 (534)
                      ..+.++.++..+.....+   .+.....+..++.+++.+...+.....+.+.+|++ |++++|+.+....+|+.+++.+.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~  174 (438)
T TIGR00712        95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV  174 (438)
T ss_pred             HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence            344444444444443321   13333444455556666666666667777888755 99999999999999999998887


Q ss_pred             hhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +...+.  .  .+|+..|++.+++.++..+..+++
T Consensus       175 ~~~~~~--~--~~w~~~f~~~~~~~~i~~~~~~~~  205 (438)
T TIGR00712       175 LLGMAW--F--NDWHAALYFPAICAIIVALFAFAM  205 (438)
T ss_pred             HHHHHH--h--hhhHHHHHHHHHHHHHHHHHHHHh
Confidence            765543  1  589999999888777655544443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.30  E-value=7.7e-11  Score=119.26  Aligned_cols=154  Identities=16%  Similarity=0.191  Sum_probs=124.1

Q ss_pred             HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136        302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG  381 (534)
Q Consensus       302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  381 (534)
                      ..+.....+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+          ..+.++.++..+...
T Consensus        35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~  103 (394)
T PRK10213         35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV----------ILFAVLLTLSCLLVS  103 (394)
T ss_pred             HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH----------HHHHHHHHHHHHHHH
Confidence            333444456776665 899999999999999999999999999999999999764          455555555555555


Q ss_pred             hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHH
Q psy14136        382 YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVF  460 (534)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f  460 (534)
                      ..+ +.+..++.-++.+++.+...+.....+.|..|++ |+++.++.....++|..++|.+.+.+.+.     .+|+..|
T Consensus       104 ~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-----~gw~~~f  177 (394)
T PRK10213        104 FAN-SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-----IGWRNVF  177 (394)
T ss_pred             HHC-hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHHH
Confidence            554 6777777777778888887888888888988865 99999999999999999999999999988     7999999


Q ss_pred             HHHHHHHHHHHH
Q psy14136        461 LIAGAVGSCTYF  472 (534)
Q Consensus       461 ~~~~~~~~~~~~  472 (534)
                      ++.+++.++..+
T Consensus       178 ~~~~~l~~~~~l  189 (394)
T PRK10213        178 NAAAVMGVLCIF  189 (394)
T ss_pred             HHHHHHHHHHHH
Confidence            988766655443

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.29  E-value=1.3e-11  Score=122.60  Aligned_cols=143  Identities=24%  Similarity=0.372  Sum_probs=129.8

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCee-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKT-VFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~-~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      .+|.++.+.+++.+...++..++.++.|++.||+|||+ .+..+.++..++.++..+.  ++.+.+++..++.|++.+..
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~  282 (352)
T cd06174         205 VLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA--PSLALLLVALLLLGFGLGFA  282 (352)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHhcc
Confidence            45889999999999999999999999999999999999 9999999999988886544  56888999999999999999


Q ss_pred             hhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhh
Q psy14136        176 WPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWW  241 (534)
Q Consensus       176 ~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~  241 (534)
                      .+...+++.|..|+++|++.+++. ....+|..+++.+.+.+.+..+|+..|++.+++.++..+..+
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~  349 (352)
T cd06174         283 FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL  349 (352)
T ss_pred             chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence            999999999999999999999954 788999999999999999989999999999888887666544

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK03545 putative arabinose transporter; Provisional

Probab=99.29  E-value=6.5e-11  Score=119.84  Aligned_cols=171  Identities=14%  Similarity=0.081  Sum_probs=128.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      ++.+.+..+......+.....+|.+.++ +|.+..+.++..+...++..++.+..|++.||+|||+.+          ..
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~   79 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSDIAQS-FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL----------IG   79 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHHHHhH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH----------HH
Confidence            4444444444333333344456766554 999999999999999999999999999999999999764          45


Q ss_pred             HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136        369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ  447 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~  447 (534)
                      +..+..++.....+.+ +.+.+.+..++.+.+.+...+....++.+..|++ |++++|+......+|..++|.+.+.+.+
T Consensus        80 ~~~~~~~~~~~~~~~~-~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~  158 (390)
T PRK03545         80 LFVLFIASHVLSALAW-NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ  158 (390)
T ss_pred             HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            5556666666666655 6666666666666666666677777888887755 9999999999999999999999999888


Q ss_pred             ccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        448 DDETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      .     .+|+..|++.+++.++..+....
T Consensus       159 ~-----~gw~~~f~~~~~~~~l~~~~~~~  182 (390)
T PRK03545        159 Y-----LGWRTTFLAIGGGALITLLLLIK  182 (390)
T ss_pred             H-----hcHHHHHHHHHHHHHHHHHHHHH
Confidence            7     79999999988877666544433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.29  E-value=3.1e-11  Score=121.25  Aligned_cols=159  Identities=14%  Similarity=0.122  Sum_probs=121.6

Q ss_pred             HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY  382 (534)
Q Consensus       303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (534)
                      .+......|.+.+ .+|.+..+.++..+...++..++.++.|++.||+|||+.+          .++..+.++......+
T Consensus        19 ~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~----------~~~~~~~~~~~~~~~~   87 (377)
T TIGR00890        19 VYTWTLLAPPLGR-YFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA----------MLGGILYGLGFTFYAI   87 (377)
T ss_pred             HhhhhhHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh----------HHhHHHHHHHHHHHHH
Confidence            4444555665554 5899999999999999999999999999999999999875          4555555555555555


Q ss_pred             cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136        383 LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI  462 (534)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~  462 (534)
                      .+ +.+...+...+.+++.+...+.......+.+|++|+++.++......+|..+++.+.+.+.+.     .+|+..|++
T Consensus        88 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~f~~  161 (377)
T TIGR00890        88 AD-SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINL-----EGVPAAFIY  161 (377)
T ss_pred             HH-HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhc-----ccHHHHHHH
Confidence            55 566666666666666666666666667777888899999999999999988877777777777     789999999


Q ss_pred             HHHHHHHHHHHHHhhc
Q psy14136        463 AGAVGSCTYFFYQVLG  478 (534)
Q Consensus       463 ~~~~~~~~~~~~~~~~  478 (534)
                      .+++.++..+..+++.
T Consensus       162 ~~~~~~~~~~~~~~~~  177 (377)
T TIGR00890       162 MGIIFLLVIVLGAFLI  177 (377)
T ss_pred             HHHHHHHHHHHHHHhe
Confidence            8887777665554443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.28  E-value=8.8e-11  Score=119.59  Aligned_cols=175  Identities=14%  Similarity=0.075  Sum_probs=131.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136        290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~  369 (534)
                      +...+.+++...-...+....| .+++.+|++..+.+++.+...++..++.+..|++.||+|||+.+          ..+
T Consensus        11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~----------~~~   79 (412)
T TIGR02332        11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI----------AGI   79 (412)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH----------HHH
Confidence            3444444444444444555555 56667999999999999999999999999999999999998763          455


Q ss_pred             HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .++.++......+.+ +...+++.-++.+++.+...+....++.|.+|++ |++++|+.+....+|..+++.+.+++.+.
T Consensus        80 ~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~  158 (412)
T TIGR02332        80 MVLWGIASTATMFAT-GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL  158 (412)
T ss_pred             HHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            666666666666655 6666777777778888877777778889988865 99999999999999999999999887642


Q ss_pred             cc-cChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        449 DE-TSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       449 ~~-~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      .. .+..+|+..|++.++..++..++..+
T Consensus       159 ~~~~~~~gwr~~f~~~~~~~l~~~~~~~~  187 (412)
T TIGR02332       159 DGLMALKGWQWLFLLEGFPSVILGVMTWF  187 (412)
T ss_pred             CCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence            00 01158999999987776655444433

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.28  E-value=6.1e-11  Score=123.71  Aligned_cols=171  Identities=20%  Similarity=0.245  Sum_probs=136.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136        290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~  369 (534)
                      ..+++..+.............|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+          .++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~   73 (485)
T TIGR00711         5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF----------LIS   73 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH----------HHH
Confidence            344555555556566666777877766 899999999999999999999999999999999998763          455


Q ss_pred             HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .++..++.+.....+ +....++..++.+++.+...+....++.|..|++ |+++.++......+|..++|.+.+++.+.
T Consensus        74 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  152 (485)
T TIGR00711        74 TFAFTLGSLLCGVAP-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN  152 (485)
T ss_pred             HHHHHHHHHHHhCcC-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence            556666666666655 6777777777778888887888888899988855 99999999999999999999999999988


Q ss_pred             cccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        449 DETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       449 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                           .+|+..|++.+.+.++..++..+.
T Consensus       153 -----~~w~~~f~~~~~~~~~~~~~~~~~  176 (485)
T TIGR00711       153 -----YHWRWIFLINVPIGIIVVVVAFFI  176 (485)
T ss_pred             -----cCceehhhhhhHHHHHHHHHHHHH
Confidence                 789999998877766665554444

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.28  E-value=2.8e-11  Score=123.27  Aligned_cols=141  Identities=21%  Similarity=0.155  Sum_probs=120.6

Q ss_pred             hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHH
Q psy14136        104 TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALV  183 (534)
Q Consensus       104 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i  183 (534)
                      ..+.+.+++.++..++.++.|++.||+|||+.+..+.++..++.+...+.  ++.+.+++.+++.|++.+...+...+++
T Consensus       259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~  336 (408)
T PRK09874        259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV--QTPLQLGILRFLLGAADGALLPAVQTLL  336 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHhhhHhhHHHHHHHH
Confidence            45677778888889999999999999999999999988877776664333  5778888899999999999999999999


Q ss_pred             hcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        184 GHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       184 ~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      .+..|+++|++.++++ ....+|..+||.+++.+.+.+||+..|++.+++.++..+..++..++
T Consensus       337 ~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~  400 (408)
T PRK09874        337 VYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR  400 (408)
T ss_pred             HHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999955 67889999999999999999999999999998888877766554433

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.28  E-value=7.5e-11  Score=118.23  Aligned_cols=171  Identities=16%  Similarity=0.170  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136        288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA  367 (534)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~  367 (534)
                      .+|..++..+........+..+.|.++++.+|++..+.+++.+...++..++.++.|++.||+|||+.+          .
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~   71 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT----------T   71 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH----------H
Confidence            356667777777777788888899878778999999999999999999999999999999999998763          4


Q ss_pred             HHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136        368 ISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFL  446 (534)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~  446 (534)
                      ++.++..+..+...+.+.+.+...+..++.+.+.+ .......++.+..|++ |+++.++.....++|..+++.+.+.+.
T Consensus        72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~  150 (366)
T TIGR00886        72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII  150 (366)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            55555555555555543134444444454454433 3344566777877755 999999999888888888777776655


Q ss_pred             ccc-----ccChhhHHHHH-HHHHHHHHH
Q psy14136        447 QDD-----ETSLESWRQVF-LIAGAVGSC  469 (534)
Q Consensus       447 ~~~-----~~~~~~~~~~f-~~~~~~~~~  469 (534)
                      ...     .....+|+..| +..+++..+
T Consensus       151 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  179 (366)
T TIGR00886       151 GSLIFGAGLPAHLAWGWAFVIVPAGILLL  179 (366)
T ss_pred             HHHHhcccccccccccchhHHHHHHHHHH
Confidence            420     00114788888 333444333

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.27  E-value=1.5e-11  Score=127.66  Aligned_cols=152  Identities=15%  Similarity=0.091  Sum_probs=118.4

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHH
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA---AVL------HYGALIALRSI  167 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---~~~------~~~~l~~~r~l  167 (534)
                      ++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++.++.   ..+      +...+....++
T Consensus       313 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (481)
T TIGR00879       313 NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLF  392 (481)
T ss_pred             HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHH
Confidence            668888888999999999999999999999999999999999988888877665421   111      22223333333


Q ss_pred             HhhhhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        168 QGIASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       168 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      .+.......+....++.|.+|+++|+++++ ......+|.++++.+.+.+.++.+|++.|++.++++++..++.+++.||
T Consensus       393 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~  472 (481)
T TIGR00879       393 IAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPE  472 (481)
T ss_pred             HHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheeccc
Confidence            333323345677788899999999999999 5578899999999999999998999999999998888887777766666


Q ss_pred             CC
Q psy14136        247 AP  248 (534)
Q Consensus       247 ~p  248 (534)
                      ++
T Consensus       473 ~~  474 (481)
T TIGR00879       473 TK  474 (481)
T ss_pred             CC
Confidence            43

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.27  E-value=3.4e-09  Score=104.12  Aligned_cols=331  Identities=13%  Similarity=0.080  Sum_probs=212.2

Q ss_pred             cccCChhhHH-HHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         97 EFDWDTTTQG-AILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        97 ~~~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      +.|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+..++.-+.  ++...+-+..++.|++.+ .
T Consensus        34 ~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~--~sv~~mq~~q~~yg~~~a-~  110 (412)
T PF01770_consen   34 DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG--TSVLAMQLMQFFYGLATA-A  110 (412)
T ss_pred             ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--CcHHHHHHHHHHHHHHHH-H
Confidence            4688887764 45556666777788899999999999999999999988887774344  799999999999999977 4


Q ss_pred             hhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--cCCchhhhhhchhhHHHHHHhhhhccCCCCCC-
Q psy14136        176 WPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH-  251 (534)
Q Consensus       176 ~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~-  251 (534)
                      ..+-++++-...|+++-.++.+ .-++.-+|..++..+|-.+...  .+.+...++......+.. ++.+++|..++.. 
T Consensus       111 evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fLP~~~~S~~  189 (412)
T PF01770_consen  111 EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFLPMPKRSLF  189 (412)
T ss_pred             HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHcCCCCcccc
Confidence            7888999999999999888888 4477778888888888777653  334445555443333333 3334556544321 


Q ss_pred             --cccch------hhhhhhhhccCc---cccCC----CCC-------cccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhc
Q psy14136        252 --PRITR------KELDYIQENIEP---TIVGS----KGL-------KVPWVSILTSPPAWAIGITTFGRIWVHYIFIIP  309 (534)
Q Consensus       252 --~~~~~------~~~~~~~~~~~~---~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (534)
                        +....      .+.+...+..+.   .++.+    ...       ...+++..++|.++...+-+.+...+++.+.+|
T Consensus       190 f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nY  269 (412)
T PF01770_consen  190 FHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINY  269 (412)
T ss_pred             eeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHH
Confidence              10000      000100000000   00000    011       112344556788877777777777777777777


Q ss_pred             hhhhhHhh--hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q psy14136        310 GPRYMKTI--LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNV  387 (534)
Q Consensus       310 ~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (534)
                      ......+.  .+-...-.|.+-....+.+.++.+..|++..++.+..        ...+....++.+.+++++.+.+ +.
T Consensus       270 vQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~--------~l~l~~~S~l~a~~L~lm~~t~-~I  340 (412)
T PF01770_consen  270 VQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG--------ELALGVFSLLQAGLLFLMSFTG-NI  340 (412)
T ss_pred             HHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH--------HHHHHHHHHHHHHHHHHHHHhh-HH
Confidence            66666653  1233344677777888888888888888854444432        2233455556666677777766 77


Q ss_pred             hHHHHHHHHHHHHhhhcccccchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhH
Q psy14136        388 ALVLITWFVAVTLITASYAGAMANVVD-IGPNFAGPILAFAQTIHMTASFLSPM  440 (534)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~  440 (534)
                      +......++.........+....-++. +..+.-|..+|+.+++..+-..+-..
T Consensus       341 wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~  394 (412)
T PF01770_consen  341 WVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTL  394 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEE
Confidence            777777777766666555555444444 33344888888877776555554443

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.27  E-value=1.6e-10  Score=112.82  Aligned_cols=174  Identities=20%  Similarity=0.148  Sum_probs=153.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      ..++.+.+..|+.....+...-.+|+..++ +|.+...+|++.+.+..+..++.++...+.||+.||+.+          
T Consensus        13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL----------   81 (394)
T COG2814          13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL----------   81 (394)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH----------
Confidence            456778888888888999999999999988 899999999999999999999999999999999999874          


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      ...+.+..++-++..+.+ +...+.+.=++.++..|..++.......++.|++ |++++++..+...++..+|..++.++
T Consensus        82 l~~l~lFi~~n~l~alAp-~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i  160 (394)
T COG2814          82 LGLLALFIVSNLLSALAP-SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL  160 (394)
T ss_pred             HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH
Confidence            455566666666666666 8888999999999999999999999999988765 99999999999999999999999999


Q ss_pred             ccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      -|.     .||+..|+..+.+.++..+..+..
T Consensus       161 g~~-----~GWR~~F~~ia~l~ll~~~~~~~~  187 (394)
T COG2814         161 GQL-----FGWRATFLAIAVLALLALLLLWKL  187 (394)
T ss_pred             HHH-----hhHHHHHHHHHHHHHHHHHHHHHh
Confidence            999     999999999999888877765544

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.27  E-value=7.5e-11  Score=118.62  Aligned_cols=169  Identities=12%  Similarity=0.042  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q psy14136        293 GITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI  372 (534)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~  372 (534)
                      .+..++...+.......+|.|+++.+|.+..+.+++.+...+...+..++.|+++||+|||+.+         ...+..+
T Consensus         3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~---------~~~~~~~   73 (375)
T TIGR00899         3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL---------ILFCCLL   73 (375)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH---------HHHHHHH
Confidence            3455666677777788889999887999999999999999999999999999999999988753         2233333


Q ss_pred             HHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHH--HHHHhHHHHhhhhHHhHhhhhccccc
Q psy14136        373 PALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPI--LAFAQTIHMTASFLSPMVAGYFLQDD  449 (534)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~--~g~~~~~~~~g~~i~~~~~g~l~~~~  449 (534)
                      ..+........+ +.+..++...+.+.+.+...+.......+..|++ |+.+  .+.......+|..++|.+.+.+.+. 
T Consensus        74 ~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-  151 (375)
T TIGR00899        74 AALACLLFAWNR-NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-  151 (375)
T ss_pred             HHHHHHHHHhcc-hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-
Confidence            334444444444 4444444333344444445555556666666644 5543  6777888889999999999999888 


Q ss_pred             ccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        450 ETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                          .+|+..|++.+.+.++..+..++
T Consensus       152 ----~~~~~~f~~~~~~~~~~~~~~~~  174 (375)
T TIGR00899       152 ----FGFTVMFLTAALAFVLCGVLVWL  174 (375)
T ss_pred             ----cccHHHHHHHHHHHHHHHHHHHH
Confidence                78999999988877666655544

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.27  E-value=1.5e-10  Score=117.94  Aligned_cols=169  Identities=13%  Similarity=0.106  Sum_probs=127.4

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ  370 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~  370 (534)
                      ...+..++............|.+.++ +|.++.+.+++.+...++..++.++.|++.||+|||+.+          ..+.
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~   87 (406)
T PRK11551         19 LCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL----------IVSV   87 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH----------HHHH
Confidence            33344444444455555666766665 899999999999999999999999999999999999874          3444


Q ss_pred             HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc
Q psy14136        371 VIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD  449 (534)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~  449 (534)
                      .+..+..+...+.+ +.+...+..++.+.+.+...+.....+.|..|++ |++++++.+....+|..+++.+.+.+.+. 
T Consensus        88 ~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-  165 (406)
T PRK11551         88 ALFGLFSLATAQAW-DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD-  165 (406)
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-
Confidence            44444444444544 6666667777777777777777888888988755 99999999999999999999998888777 


Q ss_pred             ccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        450 ETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                          .+|+..|++.+++.++..++...
T Consensus       166 ----~~~~~~~~~~~~~~~~~~~~~~~  188 (406)
T PRK11551        166 ----AAWRHIFYVGGVGPLLLVPLLMR  188 (406)
T ss_pred             ----cCHHHHHHHHHHHHHHHHHHHHH
Confidence                78999998877665555444333

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.26  E-value=1.7e-10  Score=116.82  Aligned_cols=171  Identities=13%  Similarity=0.100  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136        290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~  369 (534)
                      ....+..+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+          ..+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l----------~~~   74 (392)
T PRK10473          6 LCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA----------IPG   74 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH----------HHH
Confidence            334444445555555666778877766 899999999999999999999999999999999998763          455


Q ss_pred             HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .++..+........+ +.+...+..++.+.+.+...+.....+.+..|++ |+++.++.+....++..++|.+.+.+.+.
T Consensus        75 ~~~~~i~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~  153 (392)
T PRK10473         75 AALFIIASLLCSLAE-TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK  153 (392)
T ss_pred             HHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            555555555555544 5555555555666666666667777888888755 99999999999999999999999888777


Q ss_pred             cccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        449 DETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       449 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                           .+|+..|++.+++.++..++.+..
T Consensus       154 -----~g~~~~~~~~~~~~~i~~~~~~~~  177 (392)
T PRK10473        154 -----FPWQSLFYTMAAMGILVLLLSLFI  177 (392)
T ss_pred             -----cChHHHHHHHHHHHHHHHHHHHHH
Confidence                 789999988887766665554333

>PRK11043 putative transporter; Provisional

Probab=99.25  E-value=1.6e-10  Score=117.40  Aligned_cols=161  Identities=16%  Similarity=0.124  Sum_probs=118.3

Q ss_pred             HHHHHHhchhhh--hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHH
Q psy14136        302 VHYIFIIPGPRY--MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVML  379 (534)
Q Consensus       302 ~~~~~~~~~~~~--l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  379 (534)
                      .+.....+.|.+  +++.+|.+..+.+++.+...++..++.++.|+++||++||+.+          ..+..+..+..+.
T Consensus        18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~~~~   87 (401)
T PRK11043         18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL----------LAGLSLFALGSLG   87 (401)
T ss_pred             HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH----------HHHHHHHHHHHHH
Confidence            333444444443  4455899999999999999999999999999999999998763          4444455555555


Q ss_pred             HhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHH
Q psy14136        380 IGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQ  458 (534)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~  458 (534)
                      ..+.+ +.+...+..++.+.+.+...+.......+..|++ +++..+..+....++..++|.+.+.+.+.     .+|+.
T Consensus        88 ~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~g~~~  161 (401)
T PRK11043         88 MLWVE-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-----FGWQA  161 (401)
T ss_pred             HHHhc-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CChHH
Confidence            55554 5555555555555555555555556677877766 88888988888899999999999999988     78999


Q ss_pred             HHHHHHHHHHHHHHHHHhhc
Q psy14136        459 VFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       459 ~f~~~~~~~~~~~~~~~~~~  478 (534)
                      .|++.+++.++..+..+.++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~  181 (401)
T PRK11043        162 IFATLFAITLLLILPTLRLK  181 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHcC
Confidence            99988877776665554443

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.25  E-value=2.6e-10  Score=119.04  Aligned_cols=172  Identities=13%  Similarity=0.092  Sum_probs=133.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      +..+++..+....-...+..-+|.+..+ +|.+..+.+++.+.+.++.....+..|+++||+|||+.+          .+
T Consensus         8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l----------~~   76 (495)
T PRK14995          8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL----------ML   76 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HH
Confidence            3445555566666666677778888776 899999999999999999999999999999999999864          55


Q ss_pred             HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhcc-CC-CchhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136        369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDI-GP-NFAGPILAFAQTIHMTASFLSPMVAGYFL  446 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~  446 (534)
                      +..+..++.+.....+ +.+..++.-.+.+.+.+...+.....+.+. .| ++|++++|+......+|..+||.+.|.+.
T Consensus        77 ~~~~~~~~~~~~~~a~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~  155 (495)
T PRK14995         77 GGTLFGLASLAAAFSP-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL  155 (495)
T ss_pred             HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            6666666666666665 677777776777777777666665555454 35 44999999999999999999999999999


Q ss_pred             cccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        447 QDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       447 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +.     .+|++.|++...+.++.+++..+.
T Consensus       156 ~~-----~gwr~~f~i~~~~~~~~~~l~~~~  181 (495)
T PRK14995        156 EH-----FYWGSVFLINVPIVLVVMGLTARY  181 (495)
T ss_pred             cc-----CChHHHHHHHHHHHHHHHHHHHHh
Confidence            98     899999999877766665554444

>PRK12382 putative transporter; Provisional

Probab=99.25  E-value=1.4e-10  Score=117.53  Aligned_cols=166  Identities=15%  Similarity=0.117  Sum_probs=119.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136        286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF  365 (534)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~  365 (534)
                      ++.++.+.+..+............+|.++++.+|.|..+.+++.+...+...+++++.|+++||+|||+.+         
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l---------   84 (392)
T PRK12382         14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA---------   84 (392)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH---------
Confidence            34556666666666666667777888888877999999999999999999999999999999999999864         


Q ss_pred             HHHHHHHHHHHH---HHHhhcC----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhH
Q psy14136        366 TAISQVIPALLV---MLIGYLG----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFL  437 (534)
Q Consensus       366 ~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i  437 (534)
                       ..+.+...+..   .......    .+.+.+++.-++.+.+.+...+....+..+..|++ |++++|+......+|..+
T Consensus        85 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~  163 (392)
T PRK12382         85 -LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA  163 (392)
T ss_pred             -HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH
Confidence             33333222221   1111111    13344555555666666666666666777777655 999999999988999999


Q ss_pred             HhHhhhhcccccccChhhHHHHHHHHHHH
Q psy14136        438 SPMVAGYFLQDDETSLESWRQVFLIAGAV  466 (534)
Q Consensus       438 ~~~~~g~l~~~~~~~~~~~~~~f~~~~~~  466 (534)
                      +|.+.+.+.+.     .+|+..+.+..++
T Consensus       164 g~~~~~~l~~~-----~g~~~~~~~~~~~  187 (392)
T PRK12382        164 GAPLGLLLHSH-----FGFAALALTTMVL  187 (392)
T ss_pred             HHHHHHHHHhc-----cChHHHHHHHHHH
Confidence            99999998887     7888766654443

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.24  E-value=2.2e-10  Score=122.77  Aligned_cols=165  Identities=13%  Similarity=0.121  Sum_probs=123.7

Q ss_pred             HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC  385 (534)
Q Consensus       306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (534)
                      +...+|.+.. .+|.+..+.+++.+...++.+++.++.|+++||+|||+.+          ++++++.+++.++..+.+ 
T Consensus       186 is~ilp~i~~-~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l----------ii~lil~~i~~ll~afa~-  253 (742)
T TIGR01299       186 VGFVLPSAEK-DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL----------LICLSVNGFFAFFSSFVQ-  253 (742)
T ss_pred             HHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHHh-
Confidence            3344554444 4899999999999999999999999999999999999764          344445555555555554 


Q ss_pred             chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc--------cChhhH
Q psy14136        386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE--------TSLESW  456 (534)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~--------~~~~~~  456 (534)
                      +.+.+++.-++.+++.+...+....++.|..|++ ||...++.++...+|.++++.+...+....+        ....+|
T Consensus       254 s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gW  333 (742)
T TIGR01299       254 GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSW  333 (742)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccH
Confidence            6667777778888888888889999999999866 9999999999999999998877655443200        011478


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        457 RQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       457 ~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      +..+++.++..++.+++.+++++..+
T Consensus       334 R~l~~i~~lp~ll~ll~~~~lPESPr  359 (742)
T TIGR01299       334 RVFVIVCAFPCVFAIGALTFMPESPR  359 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence            99888887777766666666666543

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.23  E-value=3.6e-10  Score=114.48  Aligned_cols=175  Identities=11%  Similarity=0.003  Sum_probs=116.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHH
Q psy14136        286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFL-CSYLSSVLFCYLADQLFVRNIMSLTNIRKV  364 (534)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~  364 (534)
                      |.+.+...+..++.......+...+|.|+++.+|.+..+.|++.+...+ ..+.+.+..++ .||+|+|+.+        
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~--------   84 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSL--------   84 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHH--------
Confidence            5566777777888888888888899999988899999999998766655 44455555555 9999998753        


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-h--hHHHHHHhHHHHhhhhHHhHh
Q psy14136        365 FTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-A--GPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~--g~~~g~~~~~~~~g~~i~~~~  441 (534)
                       +..+.++.++......+.+ +.+.+.+...+.+.......+....+..+..+++ |  +...++.+....+|..++|.+
T Consensus        85 -~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i  162 (393)
T PRK15011         85 -IVFCCLLGVLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL  162 (393)
T ss_pred             -HHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence             2233333333333444443 4443333322233333344444455555544432 3  344578888889999999999


Q ss_pred             hhhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        442 AGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       442 ~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      .+.+.+.     .||+..|++.++..++..+....
T Consensus       163 ~~~l~~~-----~gw~~~f~~~~~~~~~~~~~~~~  192 (393)
T PRK15011        163 AYALAMG-----FSFTVMYLSAAVAFIVCGVMVWL  192 (393)
T ss_pred             HHHHHHh-----cChHHHHHHHHHHHHHHHHHHHh
Confidence            9999988     79999999988776666555443

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.23  E-value=2e-10  Score=117.77  Aligned_cols=161  Identities=18%  Similarity=0.191  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      +....+..+.............|.+ ++.+|.++.+.++..+...++..++.++.|++.||+|||+.+          .+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l----------~~   88 (426)
T PRK12307         20 LFSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM----------MW   88 (426)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HH
Confidence            4444444444444444444455544 445899999999999999999999999999999999998764          45


Q ss_pred             HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136        369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ  447 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~  447 (534)
                      +.++.+++.....+.+ +.+...+.-++.+++.+...+....++.|..|++ |+++.++......+|..+++.+.+.+.+
T Consensus        89 ~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~  167 (426)
T PRK12307         89 SIVAYSVGTGLSGLAS-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE  167 (426)
T ss_pred             HHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence            5555556555555555 6666677777777777777777888888988866 9999999999999999999999998888


Q ss_pred             ccccChhhHHHHHHHHHHH
Q psy14136        448 DDETSLESWRQVFLIAGAV  466 (534)
Q Consensus       448 ~~~~~~~~~~~~f~~~~~~  466 (534)
                      .     .+|+..|++....
T Consensus       168 ~-----~~w~~~f~i~~~~  181 (426)
T PRK12307        168 A-----YGWRAAFFVGLLP  181 (426)
T ss_pred             c-----CCHHHHHHHHHHH
Confidence            7     7899999875443

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.22  E-value=1.9e-10  Score=116.63  Aligned_cols=175  Identities=14%  Similarity=0.138  Sum_probs=120.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136        286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF  365 (534)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~  365 (534)
                      +|.+|.+....++.+.+...+..++|.|+++.+|+++.+.+.+.+...++..++.++.|+++||+|||+.+         
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~---------   71 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHL---------   71 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---------
Confidence            57889999999999999999999999999988999999999999999999999999999999999998764         


Q ss_pred             HHHHHHHHHHH---HHHHhhcCC---chh-HHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHH
Q psy14136        366 TAISQVIPALL---VMLIGYLGC---NVA-LVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLS  438 (534)
Q Consensus       366 ~~~~~~~~~~~---~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~  438 (534)
                       ..+....++.   ...+...+.   ... ...+..++.+.+.+...+....+..+..+ +++...|.......+|..++
T Consensus        72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g  149 (396)
T TIGR00882        72 -LWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALC  149 (396)
T ss_pred             -HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh-hcccccchhhhhcccHHHHH
Confidence             1111111111   111111110   011 11222233334444444444444444322 24556778888889999999


Q ss_pred             hHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        439 PMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       439 ~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      |.+.|.+.+.      +|+..|++.+++.++..++.+..
T Consensus       150 ~~~~g~l~~~------~~~~~f~~~~~~~~~~~~~~~~~  182 (396)
T TIGR00882       150 ASIAGILFSI------DPQIVFWLGSGFALILMLLLMFA  182 (396)
T ss_pred             HHHHhhhhcc------CchHHHHHHHHHHHHHHHHHHHh
Confidence            9999877654      78889988887777666554443

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.22  E-value=3.4e-10  Score=114.62  Aligned_cols=152  Identities=16%  Similarity=0.102  Sum_probs=123.3

Q ss_pred             HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL  383 (534)
Q Consensus       304 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (534)
                      ..+...+|.+.++ +|+|..+.++..+...++..++.+..|++.||+|||+.+          ..+..+.+++.+...+.
T Consensus        26 ~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l----------~~~~~l~~~~~~~~~~a   94 (393)
T PRK09705         26 TSVGPLLPQLRQA-SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV----------AISLLLIAVGALMRELY   94 (393)
T ss_pred             hccchhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHC
Confidence            3445566766655 899999999999999999999999999999999999874          67778888888888877


Q ss_pred             CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136        384 GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA  463 (534)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~  463 (534)
                      + +.+..++.-++.+++.+...+.....+.+.+|++|+.++|+......+|..+++.+.+.+.+.  .  .+|+..+.+.
T Consensus        95 ~-~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~--~--~~w~~~~~~~  169 (393)
T PRK09705         95 P-QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQH--S--ETWYQTLAWW  169 (393)
T ss_pred             c-chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh--c--CCHHHHHHHH
Confidence            7 666777777788888887777777778888887799999999999999999999999988876  1  3788887665


Q ss_pred             HHHHHHHH
Q psy14136        464 GAVGSCTY  471 (534)
Q Consensus       464 ~~~~~~~~  471 (534)
                      ++..++..
T Consensus       170 ~~~~~~~~  177 (393)
T PRK09705        170 ALPAVVAL  177 (393)
T ss_pred             HHHHHHHH
Confidence            55544433

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.21  E-value=5.4e-10  Score=115.37  Aligned_cols=154  Identities=13%  Similarity=0.199  Sum_probs=107.5

Q ss_pred             HhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC--
Q psy14136        307 IIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG--  384 (534)
Q Consensus       307 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  384 (534)
                      ....| ++.+. |++..+.++..+...++..++.++.|+++||+|+|+.+          .++.++.++..+...+..  
T Consensus        49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l----------~~~~~~~~i~~~~~~~~~~~  116 (452)
T PRK11273         49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL----------PAGLILAAAVMLFMGFVPWA  116 (452)
T ss_pred             HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH----------HHHHHHHHHHHHHHHhhhcc
Confidence            34455 45665 99999999999999999999999999999999999864          455555555554444432  


Q ss_pred             -CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhH-HhHhhhhcccccccChhhHHHHHH
Q psy14136        385 -CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFL-SPMVAGYFLQDDETSLESWRQVFL  461 (534)
Q Consensus       385 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i-~~~~~g~l~~~~~~~~~~~~~~f~  461 (534)
                       .+.+..++..++.+++.+...+.......+.+|++ |++++|+.+....+|+.+ +|.+...+...     .+|+..|+
T Consensus       117 ~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~gw~~~f~  191 (452)
T PRK11273        117 TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-----NDWHAALY  191 (452)
T ss_pred             cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-----ccHHHHHH
Confidence             23444555555666666666666666677777755 999999999998888754 55443333333     58999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q psy14136        462 IAGAVGSCTYFFYQVL  477 (534)
Q Consensus       462 ~~~~~~~~~~~~~~~~  477 (534)
                      +.+++.++..++.+++
T Consensus       192 i~~~~~~~~~~l~~~~  207 (452)
T PRK11273        192 MPAFAAILVALFAFAM  207 (452)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8877766654444333

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.21  E-value=2.5e-10  Score=115.49  Aligned_cols=171  Identities=13%  Similarity=0.084  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      |.++.+++..++...+........+.+.++ ++.+..+.+++.+...+...+..++.|++.||++||+.+          
T Consensus         3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl----------   71 (393)
T PRK11195          3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM----------   71 (393)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh----------
Confidence            456667777777766655555555656554 788888899999999999999999999999999999875          


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      .++..+.++..+...... +.   ++..++.+.+.+...|...+++.|..|++ |++++|+.+....++..+||.++|.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~-~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l  147 (393)
T PRK11195         72 FIANGIKLLGCLLMLFGI-HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL  147 (393)
T ss_pred             HHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333333333333322222 22   33445667778888888899999999866 99999999999999999999999999


Q ss_pred             ccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      .+.     . |...+.+.+.+.+++.+....++
T Consensus       148 ~~~-----~-~~~~~~i~~~~~~~~~~~~~~l~  174 (393)
T PRK11195        148 ADP-----H-AEAALAVCALIYLLAALFNLFIP  174 (393)
T ss_pred             HHH-----H-HHHHHHHHHHHHHHHHHHHhcCC
Confidence            887     3 66666666655544444443333

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.21  E-value=2.4e-10  Score=117.86  Aligned_cols=156  Identities=11%  Similarity=0.101  Sum_probs=115.6

Q ss_pred             HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC  385 (534)
Q Consensus       306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (534)
                      +..+.|.+.++ +|.+..+.++..+...+...++.++.|+++||++||+.+          ..+.++..+..+...+.+ 
T Consensus        38 ~~~~~~~i~~~-~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~~~~-  105 (455)
T TIGR00892        38 VTVFFKELQQI-FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV----------IAGGLLASLGMILASFSS-  105 (455)
T ss_pred             hhhhHHHHHHH-hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH----------HhhHHHHHHHHHHHHHhh-
Confidence            44556666555 899999999999998888899999999999999998763          344445555555555544 


Q ss_pred             chhHHHHHH-HHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHH
Q psy14136        386 NVALVLITW-FVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAG  464 (534)
Q Consensus       386 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~  464 (534)
                      +.+..+... ++.+++.+...+.....+.+.+|++|+++.|+.+....+|..++|.+.+.+.+.     .+|+..|++.+
T Consensus       106 ~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-----~gwr~~f~~~~  180 (455)
T TIGR00892       106 NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFES-----FGWRGSFLILG  180 (455)
T ss_pred             hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-----hChHHHHHHHH
Confidence            444433322 344555554445555666677787799999999999999999999999999988     79999999998


Q ss_pred             HHHHHHHHHHHhhc
Q psy14136        465 AVGSCTYFFYQVLG  478 (534)
Q Consensus       465 ~~~~~~~~~~~~~~  478 (534)
                      ++.+++.+..+++.
T Consensus       181 ~~~~~~~v~~~~~~  194 (455)
T TIGR00892       181 GLLLHCCVCGALMR  194 (455)
T ss_pred             HHHHHHHHHHHHhC
Confidence            88776655544443

>TIGR00897 2A0118 polyol permease family

Probab=99.20  E-value=4.9e-10  Score=113.89  Aligned_cols=164  Identities=12%  Similarity=-0.071  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +.+....+..++..........+++.++++ +|.+..+.++..+...++..++.++.|++.||+|||+.+          
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l----------   81 (402)
T TIGR00897        13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM----------   81 (402)
T ss_pred             chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH----------
Confidence            456666677777777777777788888876 899999999999999999999999999999999999864          


Q ss_pred             HHHHHHHHHHHHHH---hhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhh-hHHhHh
Q psy14136        367 AISQVIPALLVMLI---GYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTAS-FLSPMV  441 (534)
Q Consensus       367 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~-~i~~~~  441 (534)
                      ..+..+.+++....   .....+.+...+..++.+.+.+...+.......+..| ++|++++|+.+....+|. .++|.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~  161 (402)
T TIGR00897        82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY  161 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444433333222   2222244444444555555555444445555566655 559999999999999986 578999


Q ss_pred             hhhcccccccChhhHHHHHHHHHHH
Q psy14136        442 AGYFLQDDETSLESWRQVFLIAGAV  466 (534)
Q Consensus       442 ~g~l~~~~~~~~~~~~~~f~~~~~~  466 (534)
                      .+.+.+.     .+++..++.....
T Consensus       162 ~~~l~~~-----~g~~~~~~~~~~~  181 (402)
T TIGR00897       162 SSYAIPA-----FGEMNTLWSALAF  181 (402)
T ss_pred             HHhcccc-----cchHHHHHHHHHH
Confidence            8888887     5655555444433

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.20  E-value=5.4e-10  Score=112.69  Aligned_cols=150  Identities=12%  Similarity=0.076  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +.++.+.+..++...........+|.+.++ +|.+..+.|++.+...++..++.++.|++.||+|||+.+          
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~----------   74 (381)
T PRK03633          6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY----------   74 (381)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH----------
Confidence            557777888888888888888999999987 799999999999999999999999999999999998764          


Q ss_pred             HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        367 AISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      ..+.++.++......+.+ +.+...+..++.+.+.+...+.......+..| ++|++++++.+....+|..++|.+.+.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l  153 (381)
T PRK03633         75 YLASLIFAAGCAGLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV  153 (381)
T ss_pred             HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            455555555555555555 66666666677777777666655555555555 4599999999999999999999999988


Q ss_pred             ccc
Q psy14136        446 LQD  448 (534)
Q Consensus       446 ~~~  448 (534)
                      .+.
T Consensus       154 ~~~  156 (381)
T PRK03633        154 STE  156 (381)
T ss_pred             ccc
Confidence            765

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.20  E-value=2.2e-10  Score=115.42  Aligned_cols=157  Identities=15%  Similarity=0.195  Sum_probs=124.5

Q ss_pred             HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY  382 (534)
Q Consensus       303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (534)
                      .......+|.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+.+          ..+.++.++.......
T Consensus         7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~i~~~~~~~   75 (377)
T PRK11102          7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI----------LGGTLVFALAAVACAL   75 (377)
T ss_pred             HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH----------HHHHHHHHHHHHHHHH
Confidence            34455667778776 899999999999999999999999999999999998753          4555555555555555


Q ss_pred             cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHH
Q psy14136        383 LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFL  461 (534)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~  461 (534)
                      .+ +.+...+..++.+++.+...+....++.+..|++ |+++.++.+....+|..++|.+.+.+.+.     .+|+..|+
T Consensus        76 ~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~  149 (377)
T PRK11102         76 AQ-TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-----FSWHAIFW  149 (377)
T ss_pred             Hc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cChHHHHH
Confidence            54 5666666666667777777777778888888866 99999999999999999999999999887     78999998


Q ss_pred             HHHHHHHHHHHHHHh
Q psy14136        462 IAGAVGSCTYFFYQV  476 (534)
Q Consensus       462 ~~~~~~~~~~~~~~~  476 (534)
                      +.+++.++..+....
T Consensus       150 ~~~~~~~~~~~~~~~  164 (377)
T PRK11102        150 VLALAAILAAALVFF  164 (377)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            888777666555443

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.20  E-value=3.1e-11  Score=122.02  Aligned_cols=138  Identities=15%  Similarity=0.207  Sum_probs=110.7

Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSL--LIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~--l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      +++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..+..+  +..+....+.+.+++..++.|++.+
T Consensus       248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  327 (394)
T TIGR00883       248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGG  327 (394)
T ss_pred             HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence            36788899999999999999999999999999999999988766555444332  2112222356777778899999998


Q ss_pred             chhhhHHHHHhcccCCCcchhhhhh-hh-hhhhHHHhhhhHHHHhhhhcC-Cchhhhhhchhh
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMSS-FQ-GFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLG  233 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~~-~~-~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~  233 (534)
                      ...+...+++.|.+|+++|+++.++ +. +..+|..++|.+++.+.++.| |+..++...+..
T Consensus       328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~  390 (394)
T TIGR00883       328 MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA  390 (394)
T ss_pred             HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence            8999999999999999999999994 54 456888899999999999988 888877665443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.19  E-value=1.3e-09  Score=113.29  Aligned_cols=147  Identities=12%  Similarity=0.119  Sum_probs=114.8

Q ss_pred             cccCChhhHHHHHH-HHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHhhhhc
Q psy14136         97 EFDWDTTTQGAILS-SFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-QAAV-LHYGALIALRSIQGIASG  173 (534)
Q Consensus        97 ~~~~s~~~~g~~~s-~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-~a~~-~~~~~l~~~r~l~G~g~g  173 (534)
                      ++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++.. ++.. ++...+.+.-++..+..|
T Consensus       252 ~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g  331 (491)
T PRK11010        252 GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGG  331 (491)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence            67999999999984 66789999999999999999999988776665555443321 1211 344455556666666666


Q ss_pred             chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhh
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL  243 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~  243 (534)
                      ...+...++..+..+++.+++..+ ..+..++|..+++++.|++.+.+||+..|.+.++++++..+...+.
T Consensus       332 ~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~  402 (491)
T PRK11010        332 MGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC  402 (491)
T ss_pred             HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            667778899999999999999999 5567789999888899999999999999999888888876665544

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.19  E-value=5.3e-10  Score=113.84  Aligned_cols=157  Identities=15%  Similarity=0.113  Sum_probs=118.1

Q ss_pred             HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136        302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG  381 (534)
Q Consensus       302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  381 (534)
                      ....+...+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+          .++..+.+++.....
T Consensus        28 ~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l----------~~~~~~~~~~~~~~~   96 (406)
T PRK15402         28 ANDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM----------LAGVAFFILTCLAIL   96 (406)
T ss_pred             hhhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------HHHHHHHHHHHHHHH
Confidence            344445556665554 899999999999999999999999999999999998763          344455555555555


Q ss_pred             hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHH
Q psy14136        382 YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVF  460 (534)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f  460 (534)
                      ..+ +.+..+...++.+.+.+...+.....+.|..|++ |+++.++......++..++|.+.+.+.+.     .+|+..|
T Consensus        97 ~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~~w~~~~  170 (406)
T PRK15402         97 LAQ-SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV-----LPWRGMF  170 (406)
T ss_pred             HHc-cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCccHHH
Confidence            554 5555555556656666665666677778888766 88889998888888999999999998887     7899999


Q ss_pred             HHHHHHHHHHHHHHH
Q psy14136        461 LIAGAVGSCTYFFYQ  475 (534)
Q Consensus       461 ~~~~~~~~~~~~~~~  475 (534)
                      ++.+++.++..+...
T Consensus       171 ~~~~~~~~~~~~~~~  185 (406)
T PRK15402        171 VLFAALAALSFFGLW  185 (406)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            888877776655443

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.18  E-value=4.1e-10  Score=112.54  Aligned_cols=158  Identities=11%  Similarity=-0.052  Sum_probs=113.6

Q ss_pred             HHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136        301 WVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI  380 (534)
Q Consensus       301 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  380 (534)
                      .....+...+|.+.++ +|.+..+.+++.+...++..++.+..|++.||+|||+.+          ............ .
T Consensus         5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~----------~~~~~~~~~~~~-~   72 (368)
T TIGR00903         5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL----------FGSLATFAAAAG-R   72 (368)
T ss_pred             HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH----------HHHHHHHHHHHH-H
Confidence            3444555667777665 899999999999999999999999999999999987642          122222222221 1


Q ss_pred             hhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHH
Q psy14136        381 GYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQV  459 (534)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~  459 (534)
                      .....+...+++.-++.+.+.+.. ........+..|++ |++++++.+....+|..+++.+.+.+.+.     .+|+..
T Consensus        73 ~~~~~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-----~gWr~~  146 (368)
T TIGR00903        73 LLDPFNYEWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA-----GGLQLL  146 (368)
T ss_pred             HHHhccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHH
Confidence            122125666666667777666653 33344446666654 99999999999999999999999999887     899999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q psy14136        460 FLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       460 f~~~~~~~~~~~~~~~~  476 (534)
                      |++.+++.++..++.++
T Consensus       147 f~~~~~l~~~~~~~~~~  163 (368)
T TIGR00903       147 IIPIAAVAAAGIILVLA  163 (368)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99988776665554443

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.18  E-value=5.9e-10  Score=113.03  Aligned_cols=167  Identities=13%  Similarity=0.112  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136        290 WAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~  369 (534)
                      +.......+...........+|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+          .++
T Consensus        11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~----------~~~   79 (394)
T PRK11652         11 FMLVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI----------LVG   79 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH----------HHH
Confidence            334444444444555555566777665 899999999999999999999999999999999998764          344


Q ss_pred             HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        370 QVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ..+..+........+ +.+...+..++.+++.+...+.......+..+++ ++.+.++.+....++..++|.+.+.+.+.
T Consensus        80 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~  158 (394)
T PRK11652         80 MSIFILGTLVALFAH-SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL  158 (394)
T ss_pred             HHHHHHHHHHHHHHc-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            444455444444444 5555555556666655555555555666766644 99999999999999999999999998887


Q ss_pred             cccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        449 DETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       449 ~~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                           .+|+..|++.+++.++..+.
T Consensus       159 -----~g~~~~f~~~~~~~~~~~~~  178 (394)
T PRK11652        159 -----FGWRACYLFLLLLGAGVTFS  178 (394)
T ss_pred             -----cChHHHHHHHHHHHHHHHHH
Confidence                 78999999887766554443

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.17  E-value=1.1e-10  Score=121.67  Aligned_cols=152  Identities=13%  Similarity=0.086  Sum_probs=112.7

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcc
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHY--GALIALRSIQGIASGL  174 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~--~~l~~~r~l~G~g~g~  174 (534)
                      ++|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++.+.....+.  .....+-++.+++.+.
T Consensus       300 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (479)
T PRK10077        300 TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAM  379 (479)
T ss_pred             HcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhc
Confidence            56777777777777888889999999999999999999999999999988877544321121  1222333444444443


Q ss_pred             -hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHH------HhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        175 -TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCG------FLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       175 -~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~------~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                       ..|....++.|.+|+++|+++++ ......+|.++++.+.+      ++.+..+|++.|++.++++++.+++.+++.||
T Consensus       380 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  459 (479)
T PRK10077        380 SWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE  459 (479)
T ss_pred             cccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhcccc
Confidence             34778899999999999999999 44667777777755544      44467899999999888888877777777676


Q ss_pred             CC
Q psy14136        247 AP  248 (534)
Q Consensus       247 ~p  248 (534)
                      ++
T Consensus       460 ~~  461 (479)
T PRK10077        460 TK  461 (479)
T ss_pred             CC
Confidence            54

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.17  E-value=2.5e-10  Score=115.11  Aligned_cols=139  Identities=12%  Similarity=0.113  Sum_probs=123.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW  176 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~  176 (534)
                      |+|.++.++|++.+...++..++.++.|++.||+|+|+.+.++.++.++..++.++  .++++.+++.+++.|+..+...
T Consensus       234 ~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~q~l~g~~~~~~~  311 (382)
T TIGR00902       234 AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA--IEAFPLIFLLQILHCGTFAVCH  311 (382)
T ss_pred             HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh--HhhHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999888654  4688999999999999999999


Q ss_pred             hhHHHHHhcccCCCcchhhhhhhh--hhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHH
Q psy14136        177 PAMYALVGHWIPSNERSRFMSSFQ--GFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVA  239 (534)
Q Consensus       177 ~~~~~~i~~~~~~~~r~~~~~~~~--~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~  239 (534)
                      +....++.+. |+++|++..+++.  ..++|..+++.++|++.+++|+ ..|++.+.++++..++
T Consensus       312 ~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       312 LAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             HHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence            9999999998 9999999999653  5789999999999999999986 6677777777655433

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.15  E-value=1.2e-09  Score=111.40  Aligned_cols=155  Identities=13%  Similarity=0.111  Sum_probs=117.9

Q ss_pred             HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL  383 (534)
Q Consensus       304 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (534)
                      .....-+|... +.++.+..+.++..+...++..++.++.|+++||+|||+.+          ..+..+.+++.+.....
T Consensus        33 ~~~~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----------~~~~~~~~~~~~~~~~a  101 (413)
T PRK15403         33 DLIQPGIINVV-RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL----------ITGALIFTLACAATLFT  101 (413)
T ss_pred             HhhccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH----------HHHHHHHHHHHHHHHHc
Confidence            33344455544 45899999999999999999999999999999999999864          44555555555555555


Q ss_pred             CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136        384 GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI  462 (534)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~  462 (534)
                      + +.+.+++.-++.+.+.+...+.......|.+|++ +++++++.+....++..++|.+++.+.+.     .+|+..|++
T Consensus       102 ~-~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-----~gw~~~f~~  175 (413)
T PRK15403        102 T-SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-----VHWKVLFAI  175 (413)
T ss_pred             C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHHHHH
Confidence            5 6666666666666655554455566777888866 89999999999999999999999988877     799999999


Q ss_pred             HHHHHHHHHHHHH
Q psy14136        463 AGAVGSCTYFFYQ  475 (534)
Q Consensus       463 ~~~~~~~~~~~~~  475 (534)
                      .+++.+++.+..+
T Consensus       176 ~~~~~~i~~~~~~  188 (413)
T PRK15403        176 IAVMGLIAFVGLL  188 (413)
T ss_pred             HHHHHHHHHHHHH
Confidence            8887776665433

>KOG4332|consensus

Probab=99.15  E-value=1.3e-09  Score=98.10  Aligned_cols=345  Identities=15%  Similarity=0.081  Sum_probs=193.3

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      -+.++....++|.+.-+.+-..++.+.+.|.++|+-|||+..+.-++.+.++++-   -.++++-.++++|++-|+..+.
T Consensus        64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT---KhSpqYkVLmVGR~LGGiaTsL  140 (454)
T KOG4332|consen   64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT---KHSPQYKVLMVGRVLGGIATSL  140 (454)
T ss_pred             ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh---hcCCceEEEeehhhhhhHHHHH
Confidence            4477888889999988888888899999999999999999887777776666544   3457899999999999999998


Q ss_pred             hhhhHHHHH-hcccCCCc-----chhhhh--hhhhhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhhhc
Q psy14136        175 TWPAMYALV-GHWIPSNE-----RSRFMS--SFQGFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWFLA  244 (534)
Q Consensus       175 ~~~~~~~~i-~~~~~~~~-----r~~~~~--~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~~~  244 (534)
                      .+.+.-++. .|..+++.     ...-++  .+.+..+-.+++.+.+..+.+++  |--.+|-..+.+..+...+.+   
T Consensus       141 LFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil---  217 (454)
T KOG4332|consen  141 LFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL---  217 (454)
T ss_pred             HHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH---
Confidence            887776654 44432211     111122  12344455666777777777765  444556544333333222222   


Q ss_pred             cCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHH-HhchhhhhHhhhCCccc
Q psy14136        245 FDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIF-IIPGPRYMKTILGFSIQ  323 (534)
Q Consensus       245 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~g~s~~  323 (534)
                      ..-.++-.+.+  |.+...          ...+...+.+..++++.++..+..+.-...+.+ ..|.|..--+..+.+  
T Consensus       218 ~~W~ENygdps--~~kdll----------tqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP--  283 (454)
T KOG4332|consen  218 SSWSENYGDPS--ENKDLL----------TQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP--  283 (454)
T ss_pred             hhhhhccCChh--hhHHHH----------HHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC--
Confidence            22111111111  111110          111223345566677666655555444444443 445554432212222  


Q ss_pred             cchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc----C--CchhHHHHHHHHH
Q psy14136        324 TNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL----G--CNVALVLITWFVA  397 (534)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~  397 (534)
                       -|.+++.+.++.++|+-+..++..|-..|.    ...    +.+.+++..+.+.+....    +  .+.....+.++..
T Consensus       284 -hGfiFatFMlASmLGSSla~Rl~s~s~~~v----e~y----mqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~  354 (454)
T KOG4332|consen  284 -HGFIFATFMLASMLGSSLASRLLSRSSPKV----ESY----MQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLF  354 (454)
T ss_pred             -chhHHHHHHHHHHHhhHHHHHHHhcCCccc----chH----HHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHH
Confidence             366777777777777766665555433221    111    122222222222222111    1  1344456666777


Q ss_pred             HHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        398 VTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      -.+.|..+|..+-.-.+..|++ |++.+-....--++...++-..   +.+.  ....+-+..|-+..+...++.+.
T Consensus       355 E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLyn---lh~~--~~p~~tr~mf~icS~~~~~a~i~  426 (454)
T KOG4332|consen  355 EACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN---LHVD--AFPTTTRNMFGICSAFLFVASIL  426 (454)
T ss_pred             HHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee---cccc--cCccccchhhhhhHHHHHHHHHH
Confidence            7788888888888888888977 8887776665555444443221   1111  11134456676666666655444

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.14  E-value=2e-09  Score=109.29  Aligned_cols=175  Identities=17%  Similarity=0.128  Sum_probs=128.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      ++.+++..+...+.........|.+ ++.+|.+..+.+++.+...++..++++..|++.||+|+|+.+          .+
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~----------~~   73 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI----------LL   73 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HH
Confidence            4455555555555554555666666 556999999999999999999999999999999999998763          45


Q ss_pred             HHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        369 SQVIPALLVMLIGYL--GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      +..+.+++..++...  ..+.+......++.+.+.+...+....++.+..|++ +++..++.+....+|..++|.+.+.+
T Consensus        74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l  153 (410)
T TIGR00885        74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL  153 (410)
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555555555544322  225666667777778888888888888888877765 99999999999999999999998877


Q ss_pred             cccccc---------------------ChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        446 LQDDET---------------------SLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       446 ~~~~~~---------------------~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      ......                     ...+|+.+|++.+++.++..++.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~  203 (410)
T TIGR00885       154 ILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI  203 (410)
T ss_pred             HhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            532000                     11468999988887666554443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.13  E-value=1.4e-09  Score=109.94  Aligned_cols=180  Identities=15%  Similarity=0.089  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      |.++...+.....+...+.+....+.+-++.+|++..+.+++.++..+...+.++..|++.||+|.|+.+          
T Consensus        34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~----------  103 (462)
T PRK15034         34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT----------  103 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH----------
Confidence            5666666666666555555555556555546999999999999999999999999999999999998763          


Q ss_pred             HHHHHHHHHHHHHHhhc----CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136        367 AISQVIPALLVMLIGYL----GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                      .++.++.++..+...+.    ..+...+++..++.+++ +..++.....+.+.+|++ ||++.|+....+++|..+++.+
T Consensus       104 ~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l  182 (462)
T PRK15034        104 VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV  182 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence            44445555555555543    12566666666666665 566777778888888866 9999999987777777666555


Q ss_pred             hhhcc-----cccc--------cChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        442 AGYFL-----QDDE--------TSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       442 ~g~l~-----~~~~--------~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .+.+.     +..+        .+..+++.+.++.+.+.++..++.++.
T Consensus       183 ~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~  231 (462)
T PRK15034        183 APLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG  231 (462)
T ss_pred             HHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            54432     1100        012467888777777776666665554

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.13  E-value=2.4e-09  Score=106.48  Aligned_cols=160  Identities=13%  Similarity=0.103  Sum_probs=127.8

Q ss_pred             hchhhhhHhhhCCcccc-chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136        308 IPGPRYMKTILGFSIQT-NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN  386 (534)
Q Consensus       308 ~~~~~~l~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (534)
                      .+...++.+.+|++..+ .|.+.+.+..+..+..+..|+++||+|.|+.+          .++.+.-++...+.++.. +
T Consensus        46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL----------~l~~l~Wsl~t~L~~fa~-S  114 (511)
T TIGR00806        46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL----------VLQALSFVCVWLLLLLGT-S  114 (511)
T ss_pred             HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH-H
Confidence            33444666679999999 99999999999999999999999999999864          566666666666666665 6


Q ss_pred             hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHH
Q psy14136        387 VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGA  465 (534)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~  465 (534)
                      ...+.+.-++.+.+.+..+ ....++...+|++ |+++.|+.+....+|.++++.+.+.+...   +...|....++...
T Consensus       115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~---gWr~y~~Ln~Isl~  190 (511)
T TIGR00806       115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTL---GWISYSTLNIISLV  190 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CchhHHHHHHHHHH
Confidence            7777777788888888888 8888888888866 99999999999999999999999984432   22455666777777


Q ss_pred             HHHHHHHHHHhhcCCcc
Q psy14136        466 VGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       466 ~~~~~~~~~~~~~~~~~  482 (534)
                      ..++++++.+++++.++
T Consensus       191 s~~~a~~~a~~LP~~~~  207 (511)
T TIGR00806       191 FMTFSVFLALFLKRPKR  207 (511)
T ss_pred             HHHHHHHHHHhCCCCch
Confidence            77888888888886555

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.07  E-value=1.6e-09  Score=113.42  Aligned_cols=153  Identities=13%  Similarity=0.150  Sum_probs=110.2

Q ss_pred             CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC-----chhHHHHHH
Q psy14136        320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC-----NVALVLITW  394 (534)
Q Consensus       320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  394 (534)
                      .+..+.+++.+...++.+++.++.|++.||+|||+.+          .++.++..++..+......     +....++.-
T Consensus        53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r  122 (502)
T TIGR00887        53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY----------GMELIIMIIATVASGLSPGSSPKSVMATLCFWR  122 (502)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH----------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHH
Confidence            3455667888999999999999999999999999764          3444444444444343321     145566777


Q ss_pred             HHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc------------------cChhh
Q psy14136        395 FVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE------------------TSLES  455 (534)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~------------------~~~~~  455 (534)
                      ++.+++.+...+....+..|..|++ ||++.++.+....+|..+++.+...+.....                  ....+
T Consensus       123 ~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (502)
T TIGR00887       123 FWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYM  202 (502)
T ss_pred             HHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhccc
Confidence            7788888888888999999999976 9999999999999999888887765432100                  00137


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        456 WRQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       456 ~~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      |+..+.+.++..++..+..++++|..+
T Consensus       203 WR~~~~~~~ip~~i~~~~~~~lpESpr  229 (502)
T TIGR00887       203 WRILIGFGAVPALLALYFRLTIPETPR  229 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence            999998777766666665566676644

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.06  E-value=2.4e-09  Score=108.01  Aligned_cols=161  Identities=14%  Similarity=0.091  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q psy14136        296 TFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL  375 (534)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~  375 (534)
                      .++...+...+..++|.|+++ +|.|..+.|++.+...+...++.++.|.+.||++|+...     ++... +...+.  
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~-----~~~~~-~~~~~~--   83 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA-----LRLLA-LLTLLF--   83 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH-----HHHHH-HHHHHH--
Confidence            555566667778889999987 799999999999999999999999999999999985321     11111 111111  


Q ss_pred             HHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh
Q psy14136        376 LVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES  455 (534)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~  455 (534)
                      .+ .......+.+..++...+.+.+.+...+...+...+. .++|+++.+.......+|..++|.+.+.+.+.     .+
T Consensus        84 ~~-~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~-----~g  156 (382)
T PRK11128         84 AV-AFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW-----FG  156 (382)
T ss_pred             HH-HHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-----cC
Confidence            11 2222222555555555555555666666555555554 44578888888888999999999999999998     89


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy14136        456 WRQVFLIAGAVGSCTYF  472 (534)
Q Consensus       456 ~~~~f~~~~~~~~~~~~  472 (534)
                      |+..|++.++..++..+
T Consensus       157 ~~~~f~~~~~~~~~~~~  173 (382)
T PRK11128        157 EQAILWILTAGVASMLL  173 (382)
T ss_pred             hhHHHHHHHHHHHHHHH
Confidence            99999887765544433

>KOG1330|consensus

Probab=99.06  E-value=3.9e-10  Score=109.92  Aligned_cols=175  Identities=18%  Similarity=0.106  Sum_probs=137.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      ...+++.......=.+.+...++. .++.++.+....|++.....+...+.++++|++.||+.|++++          .+
T Consensus        35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~----------~v  103 (493)
T KOG1330|consen   35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI----------AV  103 (493)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE----------ee
Confidence            334444444444444444433333 3445899999999999999999999999999999999999885          45


Q ss_pred             HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136        369 SQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ  447 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~  447 (534)
                      +..+-.++.+..++.. ..|.+.+.-.+.+.+.+...+.....+.|.+|++ |++++++.++...+|..+|-..++.+.+
T Consensus       104 G~~iW~~Av~~~~fs~-~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~  182 (493)
T KOG1330|consen  104 GIFIWTLAVFASGFSN-HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS  182 (493)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence            5555555555555554 7788888888889999999999999999999977 9999999999999999999988888888


Q ss_pred             ccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        448 DDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       448 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .  +  ..|+++|+..+++.++..++.+++.+
T Consensus       183 ~--~--~~Wr~af~~~avl~vi~~~L~~~f~~  210 (493)
T KOG1330|consen  183 L--T--FWWRWAFRGSAVLGVIVGLLVFLFVR  210 (493)
T ss_pred             C--c--cceEEEEEeehHHHHHHHHHHHhhcc
Confidence            7  2  33999999999988887777665533

>PRK09952 shikimate transporter; Provisional

Probab=99.06  E-value=1.4e-09  Score=111.83  Aligned_cols=149  Identities=15%  Similarity=0.063  Sum_probs=110.3

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhhcc
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++|.+......+..+..+...++.++.|+++||+|||+++..+.++.+++.+......  .++...+++..++.|++.+.
T Consensus       280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  359 (438)
T PRK09952        280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDM  359 (438)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence            6677777666666666777788889999999999999999888776655543322221  12344445566777888888


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhh-hhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQ-GFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~-~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      ..+...+++.|.+|++.|+.+.+ .+. +..+|+.++|.+.+++.+..  +|+..+...++..++..+..+ ..+|
T Consensus       360 ~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~~~~  434 (438)
T PRK09952        360 VVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-LMKD  434 (438)
T ss_pred             HHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-Hccc
Confidence            88889999999999999998888 454 44588999999999998743  488888877777776665554 3344

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.06  E-value=2.5e-09  Score=114.14  Aligned_cols=168  Identities=15%  Similarity=0.194  Sum_probs=120.6

Q ss_pred             HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        304 YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL  383 (534)
Q Consensus       304 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (534)
                      .++....-.-+++.++++..+.|++.+...++..++.++.+++.||.+|++.+          .++.++.+++.+++.+.
T Consensus        49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i----------~~g~ll~~lg~ll~alp  118 (633)
T TIGR00805        49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI----------GIGCAIMGLGSFLLSLP  118 (633)
T ss_pred             HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE----------EecHHHHHHHHHHHhCh
Confidence            33333333344556999999999999999999999999999999999999876          34444444444443332


Q ss_pred             C-------------------------------------------------C-chhHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        384 G-------------------------------------------------C-NVALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       384 ~-------------------------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                      +                                                 . ....+++.-++.+++.+...+....++.
T Consensus       119 hf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~  198 (633)
T TIGR00805       119 HFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYID  198 (633)
T ss_pred             HHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhh
Confidence            1                                                 0 1233445667777777777888889999


Q ss_pred             ccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccccc----------------C-hhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        414 DIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDET----------------S-LESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       414 ~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~----------------~-~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                      |..|++ |+...|+.+....+|..+|+.+++.+.+...+                . .+.|+..|++.+++.++.++.++
T Consensus       199 d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~  278 (633)
T TIGR00805       199 DFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF  278 (633)
T ss_pred             ccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            988866 99999999999999999999999987753100                0 02477788888887777666666


Q ss_pred             hhcCCc
Q psy14136        476 VLGTSE  481 (534)
Q Consensus       476 ~~~~~~  481 (534)
                      +++++.
T Consensus       279 ~~p~~l  284 (633)
T TIGR00805       279 FFPKAL  284 (633)
T ss_pred             hCcccc
Confidence            666543

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.06  E-value=4.3e-09  Score=109.00  Aligned_cols=184  Identities=17%  Similarity=0.062  Sum_probs=140.0

Q ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHH
Q psy14136        282 SILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNI  361 (534)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~  361 (534)
                      ..+|+|.+..+++.....+++......-++-++.+ ..-|+...+++.....+..++.++++|.++||++||+.+.... 
T Consensus         5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~-   82 (524)
T PF05977_consen    5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQ-   82 (524)
T ss_pred             ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHH-
Confidence            35788888888888888888877777777766665 5678888899999999999999999999999999998752111 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhH
Q psy14136        362 RKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPM  440 (534)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~  440 (534)
                           .+..++..+..++......+.+.+++..++.+.+.....|...+.+.++.|++ ...+.++.....++...+||.
T Consensus        83 -----~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPa  157 (524)
T PF05977_consen   83 -----LLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPA  157 (524)
T ss_pred             -----HHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccch
Confidence                 11111111111111222235667777778888888888999999999999876 899999999999999999999


Q ss_pred             hhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ++|.+...     .|....|.+-++..++.+++...+
T Consensus       158 lgG~Lva~-----~G~~~~f~inalsfl~~i~~l~~~  189 (524)
T PF05977_consen  158 LGGILVAF-----FGAAAAFLINALSFLISILALLRW  189 (524)
T ss_pred             HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999988     788888988887777665554443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>KOG3098|consensus

Probab=99.05  E-value=1.9e-08  Score=100.59  Aligned_cols=314  Identities=14%  Similarity=0.015  Sum_probs=185.9

Q ss_pred             HHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccC
Q psy14136        109 LSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIP  188 (534)
Q Consensus       109 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~  188 (534)
                      .++-+..+.+..++.+.+.|+.|+|+.+.++...+..-.+.  +.. +|-+.+++...+.|+|.+..+...-.++++..+
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~g--fl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st  132 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLG--FLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST  132 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHH--HHh-cchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence            67777788889999999999999999999999999887766  333 578889999999999999999999999999999


Q ss_pred             CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--------cCCc-h----------hhhhhchhhHHHHHHhhhhccCCC
Q psy14136        189 SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--------YGWR-S----------VFYTTGSLGAIWCVAWWFLAFDAP  248 (534)
Q Consensus       189 ~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--------~gwr-~----------~f~i~~~~~li~~i~~~~~~~~~p  248 (534)
                      ++.+.+..+ .++....+.++|..+...+...        .+-+ .          ...+.+++..+..+...-... .|
T Consensus       133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~-~p  211 (461)
T KOG3098|consen  133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF-LP  211 (461)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee-cC
Confidence            999999999 5566777777766544333221        1111 1          111111111111111110100 11


Q ss_pred             CCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhh--hCCcc-ccc
Q psy14136        249 LKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTI--LGFSI-QTN  325 (534)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~-~~~  325 (534)
                      .+...   .+.+..++       ...+......+++++|+.+.+....+..+..........|..+.-.  .+.+. ...
T Consensus       212 ~~~~~---~~~~~~~~-------~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~  281 (461)
T KOG3098|consen  212 SKDVV---NCKSSSET-------SFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLI  281 (461)
T ss_pred             ccchh---hhhhhccc-------cHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHH
Confidence            11110   00000000       0000111234566778887777776666665555555566555432  22222 223


Q ss_pred             hhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CC----------------chh
Q psy14136        326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GC----------------NVA  388 (534)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------~~~  388 (534)
                      +......+++.+++....+.+.+|.++....       ..+.++..+..+..++.... +.                +..
T Consensus       282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~-------~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~  354 (461)
T KOG3098|consen  282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRK-------PTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYY  354 (461)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHhhhhhhcccC-------cchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchh
Confidence            3444455667777777777777776553321       11233333333322222211 10                122


Q ss_pred             HHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136        389 LVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAG  443 (534)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g  443 (534)
                      ...+..++.+++-.......+..+....|++|..+.++...-..++..++-...+
T Consensus       355 ~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~  409 (461)
T KOG3098|consen  355 LALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSP  409 (461)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence            4444555556666677777788888888999999999998888888777655543

>PRK10133 L-fucose transporter; Provisional

Probab=99.05  E-value=1e-08  Score=105.14  Aligned_cols=148  Identities=16%  Similarity=0.130  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136        288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA  367 (534)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~  367 (534)
                      .+..+.+..+...+.........|.+ ++.+|.+..+.++..+...++..++.+..|++.||+|+|+.+          .
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l----------~   95 (438)
T PRK10133         27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI----------I   95 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------H
Confidence            44555556666666666677778877 667999999999999999999999999999999999999864          4


Q ss_pred             HHHHHHHHHHHHHh--hcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136        368 ISQVIPALLVMLIG--YLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGY  444 (534)
Q Consensus       368 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~  444 (534)
                      .+..+..++.++..  ....+.....+..++.+.+.+...+.....+.+..|++ ++..+++.+....+|..++|.+++.
T Consensus        96 ~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~  175 (438)
T PRK10133         96 TGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS  175 (438)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555555554432  22336777777778888888888888888888877766 5567999999999999999988776


Q ss_pred             cc
Q psy14136        445 FL  446 (534)
Q Consensus       445 l~  446 (534)
                      +.
T Consensus       176 l~  177 (438)
T PRK10133        176 LI  177 (438)
T ss_pred             HH
Confidence            54

>KOG3764|consensus

Probab=99.05  E-value=8.5e-10  Score=105.31  Aligned_cols=149  Identities=14%  Similarity=0.121  Sum_probs=131.1

Q ss_pred             hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q psy14136        318 LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVA  397 (534)
Q Consensus       318 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (534)
                      .+.+..+.|+++....+.+++..++.|.+.||+|+|..          +++++.+....-.++.+.. +.+.+++.=.+-
T Consensus       101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip----------m~~Gl~vmf~sTilFafg~-sy~~l~vAR~LQ  169 (464)
T KOG3764|consen  101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP----------MVAGLFVMFLSTILFAFGN-SYPMLFVARSLQ  169 (464)
T ss_pred             ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccH----------HHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHh
Confidence            45566789999999999999999999999999999866          4788888888888888877 777788888888


Q ss_pred             HHHhhhcccccchhhhccCCCc--hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        398 VTLITASYAGAMANVVDIGPNF--AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~p~~--~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                      +.+.++......+++.+.+|++  |++++|+.-.+..+|-.+||.++|.+++.     .|++..|+++++++++...+-+
T Consensus       170 gvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~-----~Gk~aPFlVL~~v~Lld~~L~l  244 (464)
T KOG3764|consen  170 GVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF-----AGKSAPFLVLAIVLLLDGALQL  244 (464)
T ss_pred             hhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-----cCCcCcHHHHHHHHHHHHHHHH
Confidence            8888888888999999999976  89999999999999999999999999999     8999999999999998888877


Q ss_pred             hhcCCcc
Q psy14136        476 VLGTSEV  482 (534)
Q Consensus       476 ~~~~~~~  482 (534)
                      +..+..+
T Consensus       245 ~vi~p~~  251 (464)
T KOG3764|consen  245 LVIEPTE  251 (464)
T ss_pred             heeCccc
Confidence            7655433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.04  E-value=3.3e-09  Score=109.13  Aligned_cols=122  Identities=17%  Similarity=0.172  Sum_probs=102.2

Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHH
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMY  180 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~  180 (534)
                      ++.+.+++.++..++..++.+++++++||+|+|+++.++.++.+++.++..+.. ++.+.+++..++.|++.+...+...
T Consensus       255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~  333 (437)
T TIGR00792       255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-SNLPLILVLIILAGFGQNFVTGLVW  333 (437)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456778888889999999999999999999999999999988888776654432 3567777888999999999999999


Q ss_pred             HHHhcccC-------CCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCc
Q psy14136        181 ALVGHWIP-------SNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWR  223 (534)
Q Consensus       181 ~~i~~~~~-------~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr  223 (534)
                      ++++|..+       ++++|...+++ ....+|..+++.+.+.+.+..||.
T Consensus       334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~  384 (437)
T TIGR00792       334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV  384 (437)
T ss_pred             HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            99999875       45578888855 678899999999999999887774

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.04  E-value=4.5e-09  Score=107.10  Aligned_cols=183  Identities=14%  Similarity=0.083  Sum_probs=129.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHH----HHhhhcccchhHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLAD----QLFVRNIMSLTNIR  362 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~l~~~~~~  362 (534)
                      +++..+....+..++.+.....+++.|+++ +|.+....+.+.....+.+++..++.|+++|    |+|||+.+      
T Consensus         4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~------   76 (477)
T TIGR01301         4 RKLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF------   76 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH------
Confidence            345566666677777888888888989876 8999999999999999999999999999999    48988764      


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-------------h---hHHHHHHHHHHHHhhhcccccchhhhccCCCc-h--hHH
Q psy14136        363 KVFTAISQVIPALLVMLIGYLGCN-------------V---ALVLITWFVAVTLITASYAGAMANVVDIGPNF-A--GPI  423 (534)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~--g~~  423 (534)
                         +..+.....+.+.++.+....             .   +..++...+..+......+...+++.|..|++ |  +.+
T Consensus        77 ---il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a  153 (477)
T TIGR01301        77 ---IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIA  153 (477)
T ss_pred             ---HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHH
Confidence               344445555555555443310             0   22233333444566666777788899988854 3  689


Q ss_pred             HHHHhHHHHhhhhHHhHhhhhcc--ccc---c---cC--hhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        424 LAFAQTIHMTASFLSPMVAGYFL--QDD---E---TS--LESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       424 ~g~~~~~~~~g~~i~~~~~g~l~--~~~---~---~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .++.+....+|+.+++.+++...  +..   .   .+  ..+++..|++.+++.+++.++..+..+
T Consensus       154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~  219 (477)
T TIGR01301       154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK  219 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence            99999999999999999887641  110   0   00  127888999988888877777665543

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.03  E-value=7e-09  Score=105.44  Aligned_cols=169  Identities=15%  Similarity=0.018  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-----hhhcccchhHHHHHHHH
Q psy14136        293 GITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-----FVRNIMSLTNIRKVFTA  367 (534)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~l~~~~~~~~~~~  367 (534)
                      ...++.+.........-+|.|+++ .|++.++.|++......  .+..++.|+++||+     ||||..         +.
T Consensus         5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~---------l~   72 (402)
T PRK11902          5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW---------LL   72 (402)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhH---------HH
Confidence            344556666677777889999998 69999999998666554  68899999999999     666532         34


Q ss_pred             HHHHHHHHHHHHHhhcCC--chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136        368 ISQVIPALLVMLIGYLGC--NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGY  444 (534)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~  444 (534)
                      ++.++.++++..+.+.+.  +.+......++.+++.....+...+++.|..|++ |+++.++......+|..+++.+.+.
T Consensus        73 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~  152 (402)
T PRK11902         73 LTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW  152 (402)
T ss_pred             HHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence            444555444444444421  3344444444445556666677788888988866 9999999999889999999999988


Q ss_pred             cccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        445 FLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       445 l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +.+.    ..+|+..|++.+++.++..+..+..
T Consensus       153 l~~~----~~gw~~~f~i~a~~~l~~~l~~~~~  181 (402)
T PRK11902        153 LADR----VLGWGNTYLLMAGLMLAGALTTLWA  181 (402)
T ss_pred             HHhc----ccCHHHHHHHHHHHHHHHHHHHHhc
Confidence            8875    0489999999888776655544333

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.02  E-value=2.2e-09  Score=91.10  Aligned_cols=134  Identities=19%  Similarity=0.257  Sum_probs=102.2

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136        328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG  407 (534)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (534)
                      +.+...++.+++.+..+++.||++||+.+          ..+..+..+..+.....+ +.+......++.+.+.+...+.
T Consensus         3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~   71 (141)
T TIGR00880         3 LLAGYALGQLIYSPLSGLLTDRFGRKPVL----------LVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALVA   71 (141)
T ss_pred             EEEeehhHHHHHHhhHHHHHhhcchhHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHh
Confidence            34556788899999999999999998753          344444444444444444 5566666667777777777778


Q ss_pred             cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ......|..|++ |+++.++.+....+|..++|.+.+.+.+.     .+|+..+++.+.+.+++.+....+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  137 (141)
T TIGR00880        72 GAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-----LGWRAPFLFLAILALAAFILLAFL  137 (141)
T ss_pred             HHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-----cchHHHHHHHHHHHHHHHHHHhhc
Confidence            888888988866 99999999999999999999999999888     788888888877776666555544

>PRK15075 citrate-proton symporter; Provisional

Probab=99.02  E-value=1.8e-09  Score=110.94  Aligned_cols=128  Identities=15%  Similarity=0.143  Sum_probs=95.0

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHhhhhcc
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI-PQ-AAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~-~~-a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+|.+..+.+++...+.++..++.+++|+++||+|||+++..+.++..+..+.. .+ ...+++..+.+..++.|++.+.
T Consensus       268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  347 (434)
T PRK15075        268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGS  347 (434)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence            578888899999999999999999999999999999999887655443322211 11 1122344444555666777777


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhh-hhhh-hhHHHhhhhHHHHhhhhcCCch
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSS-FQGF-SFGIGLTYPLCGFLIAHYGWRS  224 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~-~~~~-~~G~~~g~~l~~~l~~~~gwr~  224 (534)
                      ..+....++.|.+|+++|+++.++ +... .++..++|.+.+++.++.|+++
T Consensus       348 ~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~  399 (434)
T PRK15075        348 YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA  399 (434)
T ss_pred             HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence            777777899999999999999994 4433 3457789999999999888653

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=99.02  E-value=1.1e-07  Score=93.62  Aligned_cols=324  Identities=15%  Similarity=0.143  Sum_probs=179.3

Q ss_pred             cCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhh
Q psy14136         99 DWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPA  178 (534)
Q Consensus        99 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~  178 (534)
                      +-+.-..+.+.-+-.+...+..+.+.++.+|+..+.=+..+.++.+++.++.+++  ++.+.=+++-++.+++.|.....
T Consensus        55 ~c~~~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~--~~v~~~l~Gv~las~ssg~GE~t  132 (402)
T PF02487_consen   55 DCKSVSTGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS--PSVWVRLLGVVLASLSSGLGEVT  132 (402)
T ss_pred             CCCcccchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec--cchhHHHHHHHHHhhhhhhhHHH
Confidence            3344445666666777777777788889999986666666677777887775454  68888889999999999988888


Q ss_pred             HHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCC--chhhhhhchhhHHHHHHhhhhccCCCCCCcccc
Q psy14136        179 MYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGW--RSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRIT  255 (534)
Q Consensus       179 ~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gw--r~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~  255 (534)
                      ...+.. .+++    ...+ +.++.+.++++|+..-..+.+ .|+  |..+++...+.++..+..++.+|.++.+.+..+
T Consensus       133 fL~lt~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~  206 (402)
T PF02487_consen  133 FLSLTH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQE  206 (402)
T ss_pred             HHHHHH-hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcc
Confidence            888754 5543    2455 557888888888877666655 555  667877777776666656666665433222111


Q ss_pred             hhhhhhhhhc-cCcccc---CCCCCcccHHHhhc-CHHHHHHHHHHHHHHHHHHHHHhc-hhhhhH-hhhCCccccchhH
Q psy14136        256 RKELDYIQEN-IEPTIV---GSKGLKVPWVSILT-SPPAWAIGITTFGRIWVHYIFIIP-GPRYMK-TILGFSIQTNGLL  328 (534)
Q Consensus       256 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~g~s~~~~~~~  328 (534)
                      .++.++.++. ...+..   .....+..+++-++ -|.+...++-.+..++..|.++.- .|...- ....-...+..++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y  286 (402)
T PF02487_consen  207 SESEDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWY  286 (402)
T ss_pred             cCCCCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHH
Confidence            1111111111 111000   01111222222222 133333444445555555554332 222211 1111122344455


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH---HHhhcCCchhHHHHHHHHHHHHhhhcc
Q psy14136        329 TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVM---LIGYLGCNVALVLITWFVAVTLITASY  405 (534)
Q Consensus       329 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (534)
                      .....++.++++--..++  |+  |++        +...+.-.+..+.++   .+.+.+ +.+..++.++.-|...|..+
T Consensus       287 ~~~YQ~GVFISRSS~~~~--ri--r~l--------wils~LQ~~nl~~~~l~s~~~fip-si~ivf~lif~eGLlGGa~Y  353 (402)
T PF02487_consen  287 QLLYQLGVFISRSSLPFF--RI--RRL--------WILSLLQVINLVFLLLQSWYRFIP-SIWIVFVLIFYEGLLGGASY  353 (402)
T ss_pred             HHHHHHHHhhhhcceeee--eh--hhH--------HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHhhhHHH
Confidence            566666666665432221  22  111        112222222222211   122233 56666666666677777666


Q ss_pred             cccchhhhc-cCCCchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136        406 AGAMANVVD-IGPNFAGPILAFAQTIHMTASFLSPMVAG  443 (534)
Q Consensus       406 ~~~~~~~~~-~~p~~~g~~~g~~~~~~~~g~~i~~~~~g  443 (534)
                      ......+.+ ..+++|-.++|.....-.+|..++..++-
T Consensus       354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l  392 (402)
T PF02487_consen  354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL  392 (402)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            666655554 44566999999999988888877776653

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.02  E-value=2.9e-09  Score=105.41  Aligned_cols=186  Identities=12%  Similarity=0.070  Sum_probs=155.1

Q ss_pred             hhcC-HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC----CccccchhHhhhHHHHHHHHHHHHHHHHHHH-hhhccc
Q psy14136        283 ILTS-PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG----FSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-FVRNIM  356 (534)
Q Consensus       283 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g----~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l  356 (534)
                      .+++ |.++.+...-+.--+++|++...+..|+....+    +|.+++.-+++.+....-+..+++||++||+ |+|+. 
T Consensus        16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t-   94 (498)
T COG3104          16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT-   94 (498)
T ss_pred             cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-
Confidence            3443 567788888888999999999999999988777    9999998888888888889999999999995 77766 


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc---hhHHHHHHhHHHH
Q psy14136        357 SLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF---AGPILAFAQTIHM  432 (534)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~g~~~g~~~~~~~  432 (534)
                               +..+.++..++.+++.... .....+.+.+.+...+.|..=+.....+.|++|++   |-.++++..+..+
T Consensus        95 ---------I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iN  165 (498)
T COG3104          95 ---------IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGIN  165 (498)
T ss_pred             ---------HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEee
Confidence                     4677778888888777763 35566667777777888888888889999987643   7788999999999


Q ss_pred             hhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q psy14136        433 TASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQ  483 (534)
Q Consensus       433 ~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  483 (534)
                      +|+.++|.+.+++.+.     .+|...|...++-+..+++.+...+++...
T Consensus       166 iGsl~~p~i~~~~~~~-----~g~~~gF~~aavGm~~gl~~f~~~~r~~~~  211 (498)
T COG3104         166 IGSLIAPIITGLLAIN-----YGWHVGFGLAAVGMIIGLVIFLLGRRHVKG  211 (498)
T ss_pred             hHHHHHHHHHHHHHHh-----hCHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence            9999999999999999     899999999999999999888877765443

>TIGR00896 CynX cyanate transporter

Probab=98.99  E-value=5.9e-09  Score=104.07  Aligned_cols=149  Identities=17%  Similarity=0.117  Sum_probs=109.6

Q ss_pred             HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC  385 (534)
Q Consensus       306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (534)
                      +...+|.+.++ +|.+..+.+++.+...++..++.+..|++.||+++|+.+          .++.++..++.... ..+ 
T Consensus        19 ~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~~~~~~~~~~~-~~~-   85 (355)
T TIGR00896        19 VGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV----------AAGLLLIAAGILIR-SAP-   85 (355)
T ss_pred             CcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH----------HHHHHHHHHHHHHH-Hhc-
Confidence            34556666655 899999999999999999999999999999999998764          33443333333333 333 


Q ss_pred             chhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHH
Q psy14136        386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGA  465 (534)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~  465 (534)
                      +.+..++..++.+++.+...+.......+..|++|+++.++.+....+|..+++.+.+.+.+.  .+ .+|+..|...++
T Consensus        86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~--~~-~~w~~~f~~~~~  162 (355)
T TIGR00896        86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQH--SG-GHWQQALAWWAL  162 (355)
T ss_pred             cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hh-hhHHHHHHHHHH
Confidence            555555556666666666566666667788887899999999999999999999999888776  11 248888877665


Q ss_pred             HHHHH
Q psy14136        466 VGSCT  470 (534)
Q Consensus       466 ~~~~~  470 (534)
                      +.++.
T Consensus       163 ~~~~~  167 (355)
T TIGR00896       163 PALLA  167 (355)
T ss_pred             HHHHH
Confidence            54433

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PTZ00207 hypothetical protein; Provisional

Probab=98.98  E-value=7.5e-09  Score=107.76  Aligned_cols=158  Identities=15%  Similarity=0.112  Sum_probs=108.8

Q ss_pred             HHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136        302 VHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIG  381 (534)
Q Consensus       302 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  381 (534)
                      ..+.+..+.|.. ++.+|++..+.+.+....... ....++.|++.||+|+|+.+          .++.++..++.++..
T Consensus        42 ~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vl----------lig~ll~~iG~ll~a  109 (591)
T PTZ00207         42 FMYAFNLISGAM-QARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIF----------VLSMTVFCLGTLLFA  109 (591)
T ss_pred             HHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHH
Confidence            344555555554 556999999988887664333 34666789999999998764          566666666665555


Q ss_pred             hc-----CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhH
Q psy14136        382 YL-----GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESW  456 (534)
Q Consensus       382 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~  456 (534)
                      +.     ..+.+.+.+..++.+.+.+...+.....+.+.+|++||++.|+......+|+++.+.+...+...      +|
T Consensus       110 la~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~------~~  183 (591)
T PTZ00207        110 LTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD------NT  183 (591)
T ss_pred             HHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hH
Confidence            54     12556666666677777666666677777888998899999999999999998655554444333      45


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh
Q psy14136        457 RQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       457 ~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +..|++.+++.++..++.+.+
T Consensus       184 ~~~fl~l~vl~~vv~ll~~~~  204 (591)
T PTZ00207        184 SAYFFFLMSFALVVGILAIVF  204 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh
Confidence            667777777666655555444

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=98.98  E-value=8.4e-09  Score=119.04  Aligned_cols=184  Identities=13%  Similarity=0.015  Sum_probs=121.1

Q ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHhchhh----hhHhhhCC-ccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14136        282 SILTSPPAWAIGITTFGRIWVHYIFIIPGPR----YMKTILGF-SIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIM  356 (534)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~g~-s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l  356 (534)
                      .+++++++..+++..++..+..+.....++.    .+.+..+. +....++..+...+..++..+++|+++||++||+++
T Consensus         6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~   85 (1140)
T PRK06814          6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA   85 (1140)
T ss_pred             hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence            4566666666666665555543332222111    12111111 113456677778888999999999999999998753


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhh
Q psy14136        357 SLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTAS  435 (534)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~  435 (534)
                      .      .......+...  +..+.+...+.+.+++..++.+.+.++..+...+++.+..|++ ++.++|+.++...+|.
T Consensus        86 ~------~~~~~~~~~~~--~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~  157 (1140)
T PRK06814         86 K------ILKFAEIGIAA--LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI  157 (1140)
T ss_pred             H------HHHHHHHHHHH--HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH
Confidence            1      01111111111  1122222236777788888888888888999999999988866 9999999999999999


Q ss_pred             hHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        436 FLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       436 ~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      .+||.++|++.+.     .+|+..|+..+++.+++.++.+.++
T Consensus       158 ~igp~l~g~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  195 (1140)
T PRK06814        158 LLGTIIGGLATIS-----GNFVILVALLMGIAVLGWLASLFIP  195 (1140)
T ss_pred             HHHHHHHHHHHhc-----cccHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999999999998     7888888555555554444444443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=98.97  E-value=2.6e-07  Score=95.94  Aligned_cols=381  Identities=17%  Similarity=0.089  Sum_probs=211.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+.++.+...-....+.....+.++..+.+.+..++..|.---..+.+..+...+..+........-...+++.++..|.
T Consensus        64 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~  143 (465)
T TIGR00894        64 DNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL  143 (465)
T ss_pred             ccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence            33444455556677778888888999999999999999988777766666555543333211222235678889999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCch-hhhhhchhhHHHHHHhhhhccCCCCCCc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRS-VFYTTGSLGAIWCVAWWFLAFDAPLKHP  252 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~-~f~i~~~~~li~~i~~~~~~~~~p~~~~  252 (534)
                      ..+........+.++..+.+-.+ .......|..+|..++..+.....+++ .+.....+..+..+++.......+++++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p  223 (465)
T TIGR00894       144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP  223 (465)
T ss_pred             hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence            99999999999998888877788 557788889999999999988877774 5554444444434434333344444333


Q ss_pred             ccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhH
Q psy14136        253 RITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP  332 (534)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~  332 (534)
                      +.++++.+..++...+.. +.++.+.+.+..+++..............+..+.....++.++...+..............
T Consensus       224 ~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~  302 (465)
T TIGR00894       224 SIHPCISKFEKKYINSSL-QGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLL  302 (465)
T ss_pred             ccCCCCCHHHHHHHHhhc-ccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHH
Confidence            322222222222111111 1111111222222222222333444445555555556667777765443333333344555


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhh
Q psy14136        333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANV  412 (534)
Q Consensus       333 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (534)
                      .....++..+++.+.+++..|...+....++....+...+..+......+.............+.....+..........
T Consensus       303 ~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  382 (465)
T TIGR00894       303 SSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGV  382 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhh
Confidence            55667778888899999887644322222221211221221111122121110101111122222222223333333334


Q ss_pred             hccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        413 VDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       413 ~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      ....++..+...|..+.+.+..+.+++.+.+.+... -....++ ..|.....+..+..++...+.
T Consensus       383 ~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~-~~~~~~~-~~~~~~f~~~~~~~~i~~i~~  446 (465)
T TIGR00894       383 LINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGN-ILSQDSK-NVWLIVFLIMAFVNILCVIFY  446 (465)
T ss_pred             hhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhhe-eeCCCCc-hHHHHHHHHHHHHHHHHHHHe
Confidence            445556688899999999999999999999988776 1211122 445554444444444444443

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=98.97  E-value=4.3e-09  Score=104.03  Aligned_cols=177  Identities=12%  Similarity=0.135  Sum_probs=110.7

Q ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q psy14136        284 LTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRK  363 (534)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~  363 (534)
                      .|++.+|.+....++.++.......+.|.++++..|++..++|.+.+...+..++.+++.|.+.||++.||.+.      
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll------   77 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLL------   77 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHH------
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHH------
Confidence            46788999999999999999999999999999888999999999999999999999999999999999887641      


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh---ccCCCchhHHHHHHhHHHHhhhhHHhH
Q psy14136        364 VFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV---DIGPNFAGPILAFAQTIHMTASFLSPM  440 (534)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~g~~~g~~~~~~~~g~~i~~~  440 (534)
                       ..+....+....++...+.+.-..-..+..++++...+..+.......-   |...++.+--.|-..+.+.+|.+++..
T Consensus        78 -~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~  156 (412)
T PF01306_consen   78 -WFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASL  156 (412)
T ss_dssp             -HHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHH
Confidence             1111111111112221111100011122223333333333333222221   222333556677788888999999999


Q ss_pred             hhhhcccccccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        441 VAGYFLQDDETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       441 ~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      +.|.+.+.      +....|++.....++..++
T Consensus       157 ~~G~L~~i------~p~~~fwi~s~~~~il~ll  183 (412)
T PF01306_consen  157 LAGILFNI------NPNIIFWIASAAAIILLLL  183 (412)
T ss_dssp             HHHHHHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred             Hhheeeee------CccHHHHHHHHHHHHHHHH
Confidence            99999887      3446666655544444333

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=98.97  E-value=1.3e-08  Score=98.61  Aligned_cols=178  Identities=19%  Similarity=0.171  Sum_probs=126.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      |.++...+.....+.....+....+ .+.+.+|+|+.|.+++..+..+.+.+.++..|.+.||+|.|+..          
T Consensus        14 ~~L~~S~~af~v~F~VW~l~s~l~~-~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~----------   82 (417)
T COG2223          14 RNLWLSTLAFDVGFMVWTLFSPLGV-FIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT----------   82 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-hhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH----------
Confidence            4445444444444444444433333 44466999999999999999999999999999999999998763          


Q ss_pred             HHHHHHHHHHHHHHhhcCCch-hHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136        367 AISQVIPALLVMLIGYLGCNV-ALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGY  444 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~  444 (534)
                      .+++++..+..+...+..... .+.++.+.+.....|..+......++..+|++ +|.++|+.. .+|+|..+...+.+.
T Consensus        83 ~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~  161 (417)
T COG2223          83 ILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL  161 (417)
T ss_pred             HHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH
Confidence            455555555555544443222 12333333334445677788888889989877 999999999 999999999999988


Q ss_pred             cccccccChhh---HHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136        445 FLQDDETSLES---WRQVFLIAGAVGSCTYFFYQVLGTSE  481 (534)
Q Consensus       445 l~~~~~~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~  481 (534)
                      +...     .+   |+.+..+.....++..+..++..+..
T Consensus       162 v~~~-----~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~  196 (417)
T COG2223         162 VAVA-----FGFLAWRNVAGIYVVALAIAAVLAWLGMNDV  196 (417)
T ss_pred             HHHH-----HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8887     56   88888888877777777766665443

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.96  E-value=7.7e-09  Score=104.68  Aligned_cols=141  Identities=15%  Similarity=0.171  Sum_probs=108.7

Q ss_pred             cccCChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHhh
Q psy14136         97 EFDWDTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA-----VLHYGALIALRSIQGI  170 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-----~~~~~~l~~~r~l~G~  170 (534)
                      |.|++++++|++.....+ ...++.++.|++.||+|+|+.+..+.++.++..+.. +..     .++...++....+.++
T Consensus       237 ~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  315 (390)
T TIGR02718       237 DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW-FAQAAFWLAPGIAVAWSCSAFGSL  315 (390)
T ss_pred             hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHcccCCcHHHHHHHHHHHHH
Confidence            579999999999988764 666778999999999999999988877664433332 211     1123334455566677


Q ss_pred             hhcchhhhHHHHHhcccCC-Ccchhhhhh-hhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHH
Q psy14136        171 ASGLTWPAMYALVGHWIPS-NERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCV  238 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~-~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i  238 (534)
                      +.+...+...+.+.+..++ +++++.+++ .+..++|..+++.++|.+.+..||+..|++.+++.++..+
T Consensus       316 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~  385 (390)
T TIGR02718       316 ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL  385 (390)
T ss_pred             HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence            7788888888888888876 788999994 4678999999999999999999999999888776666443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR01272 gluP glucose/galactose transporter

Probab=98.96  E-value=3.7e-09  Score=103.03  Aligned_cols=130  Identities=11%  Similarity=0.120  Sum_probs=106.0

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW  176 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~  176 (534)
                      .+|+++.+.++..+.+..+..++.+..+++.||+|+||++.++.++.+++.++....  ++.. ....-++.|++.+..+
T Consensus       172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~--~~~~-~~~~~~l~g~~~s~i~  248 (310)
T TIGR01272       172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT--HGYV-AMWFVLALGLFNSIMF  248 (310)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc--CCHH-HHHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999999988888888776553222  2222 2335558899999999


Q ss_pred             hhHHHHHhcccCCCcchhhhhhhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhc
Q psy14136        177 PAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTG  230 (534)
Q Consensus       177 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~  230 (534)
                      |...+...+..|++ .+.+.++.....+|..++|++.|.+.+..|.+.+|++..
T Consensus       249 P~~~s~a~~~~~~~-~~~asai~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~  301 (310)
T TIGR01272       249 PTIFSLALNALGRH-TSQGSGILCLAIVGGAIVPLLQGSLADCLGIQLAFALPV  301 (310)
T ss_pred             HHHHHHHHhhhhhh-hhhhHHHHHHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence            99999999988653 455666556677999999999999999999999987543

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.95  E-value=4.7e-09  Score=97.06  Aligned_cols=152  Identities=13%  Similarity=0.121  Sum_probs=114.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV-----LHYGALIALRSIQG  169 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~-----~~~~~l~~~r~l~G  169 (534)
                      ++.+|+|.+|...+.+.-.+|..+ +++.|.+.|++|+|.++++|.+...+|..+..++..     .++|.+.+..++.|
T Consensus        29 k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~  107 (250)
T PF06813_consen   29 KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGG  107 (250)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHc
Confidence            779999999999999999999987 588999999999999999999999999988755532     25788888888998


Q ss_pred             hhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136        170 IASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAP  248 (534)
Q Consensus       170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p  248 (534)
                      .+.+....++.....+.+| ++||++.|+. ...++++.+-..+...+.+.-.-+..+ +.+....+..++..++++..|
T Consensus       108 ~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll-~la~~~~~v~l~~~~~vr~~~  185 (250)
T PF06813_consen  108 NSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLL-FLAVLPAVVCLVAMFFVRPVP  185 (250)
T ss_pred             ccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHH-HHHHHHHHHHHHHhhheeccC
Confidence            8888777888787788896 5899999955 788888877666665555542233333 333333333333334445444


Q ss_pred             C
Q psy14136        249 L  249 (534)
Q Consensus       249 ~  249 (534)
                      +
T Consensus       186 ~  186 (250)
T PF06813_consen  186 P  186 (250)
T ss_pred             C
Confidence            3

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=98.94  E-value=5.2e-09  Score=107.25  Aligned_cols=147  Identities=19%  Similarity=0.100  Sum_probs=124.6

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCe--ehhHHHHHHHHHHHHHHHH--H----HHHHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTK--TVFGFSQLVTAICSLLIPQ--A----AVLHYGALIALRS  166 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr--~~l~~~~~~~~i~~~l~~~--a----~~~~~~~l~~~r~  166 (534)
                      ++++|++..+...+.-+..+..++|++++|++.||+|.|  ++++.+++++.+..+...+  .    ..++-+.+.+.-+
T Consensus       309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~  388 (477)
T PF11700_consen  309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV  388 (477)
T ss_pred             HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence            558999999999999999999999999999999999999  8988888887655544322  0    0246778899999


Q ss_pred             HHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcC-CchhhhhhchhhHHHHHHhh
Q psy14136        167 IQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLGAIWCVAWW  241 (534)
Q Consensus       167 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~li~~i~~~  241 (534)
                      +.|+..|..++...++.++..|+++.+..+|++ ...-....+||++.+.+.+..| -|+.+....++.++.+++.+
T Consensus       389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~  465 (477)
T PF11700_consen  389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF  465 (477)
T ss_pred             HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999987 4667888999999999998876 88988887777666655543

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.93  E-value=1.5e-07  Score=99.93  Aligned_cols=149  Identities=15%  Similarity=0.203  Sum_probs=119.1

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVL------HYGALIALRSI  167 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~------~~~~l~~~r~l  167 (534)
                      .+.+|++.++...+...+....-+..+++|+++|+ +||++.+.++.++..+|.++.++...+      .....+++-.+
T Consensus        15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaL   94 (654)
T TIGR00926        15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLAL   94 (654)
T ss_pred             HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHH
Confidence            34688899999999999999999999999999997 599999999999999999886553211      12346677788


Q ss_pred             HhhhhcchhhhHHHHHhcccCCCc---chhhhh-hhhhhhhHHHhhhhHHHHhhhhc-------CCchhhhhhchhhHHH
Q psy14136        168 QGIASGLTWPAMYALVGHWIPSNE---RSRFMS-SFQGFSFGIGLTYPLCGFLIAHY-------GWRSVFYTTGSLGAIW  236 (534)
Q Consensus       168 ~G~g~g~~~~~~~~~i~~~~~~~~---r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~-------gwr~~f~i~~~~~li~  236 (534)
                      ..+|.|..-|...+...|.+++++   |-..+. .+.+.++|+.+++++.+++.+..       +|...|.+.++..++.
T Consensus        95 ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia  174 (654)
T TIGR00926        95 IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA  174 (654)
T ss_pred             HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence            889999999999999999997654   445556 44788999999999988887443       6999999998888877


Q ss_pred             HHHhhhh
Q psy14136        237 CVAWWFL  243 (534)
Q Consensus       237 ~i~~~~~  243 (534)
                      .++....
T Consensus       175 ~lvf~~g  181 (654)
T TIGR00926       175 LIVFMAG  181 (654)
T ss_pred             HHHHHHh
Confidence            6655443

>KOG0569|consensus

Probab=98.92  E-value=1.4e-08  Score=102.50  Aligned_cols=154  Identities=16%  Similarity=0.030  Sum_probs=115.6

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHH---H--HHHHHHHHHh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHY---G--ALIALRSIQG  169 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~---~--~l~~~r~l~G  169 (534)
                      +-|++..+..++.........+..+++.++.||+|||+.++.+..++.+..+++..+.  ....   .  ..+++.++..
T Consensus       299 ~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~  378 (485)
T KOG0569|consen  299 TAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI  378 (485)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            6688999999999999999999999999999999999999999999998887754331  1111   1  1233333333


Q ss_pred             hhhcc-hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        170 IASGL-TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       170 ~g~g~-~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      ++.+. .-|...-+.+|.+|++.|+.++++. ....+...+-...-..+.+.+|= +.|.+..+++++..+..++.+||+
T Consensus       379 ~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET  457 (485)
T KOG0569|consen  379 ISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET  457 (485)
T ss_pred             HhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence            33332 3689999999999999999999954 45555555555555556666664 778888888899899999999998


Q ss_pred             CCCC
Q psy14136        248 PLKH  251 (534)
Q Consensus       248 p~~~  251 (534)
                      ..+.
T Consensus       458 kgr~  461 (485)
T KOG0569|consen  458 KGRT  461 (485)
T ss_pred             CCCC
Confidence            6544

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=98.92  E-value=3.2e-08  Score=101.61  Aligned_cols=164  Identities=17%  Similarity=0.199  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHHhchhhhhHhhhC---Ccccc---chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q psy14136        296 TFGRIWVHYIFIIPGPRYMKTILG---FSIQT---NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~~g---~s~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~  369 (534)
                      .++...-...+....| ++.+.++   .+..+   .+...+...++..++.++.|++.||+|||+.+          ..+
T Consensus        31 ~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l----------~~~   99 (432)
T PRK10406         31 NLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM----------LIS   99 (432)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH----------HHH
Confidence            3333333334333344 4455453   33332   23344555566679999999999999999864          455


Q ss_pred             HHHHHHHHHHHhhcCCc-------hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136        370 QVIPALLVMLIGYLGCN-------VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       370 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                      ..+.++..+...+.+..       ...+.+.-++.+++.+...+....++.|..|++ ||.+.++.......|..+++.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~  179 (432)
T PRK10406        100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV  179 (432)
T ss_pred             HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence            55665555555554411       123455556777778888888889999988755 9999998887777777777765


Q ss_pred             hhhccccc---ccChhhHHHHHHHHHHHHHHH
Q psy14136        442 AGYFLQDD---ETSLESWRQVFLIAGAVGSCT  470 (534)
Q Consensus       442 ~g~l~~~~---~~~~~~~~~~f~~~~~~~~~~  470 (534)
                      ...+....   .....+|+..|++.++..++.
T Consensus       180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~  211 (432)
T PRK10406        180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVA  211 (432)
T ss_pred             HHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence            44332110   000168999999877665543

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=98.91  E-value=1.4e-06  Score=88.46  Aligned_cols=253  Identities=9%  Similarity=0.019  Sum_probs=156.2

Q ss_pred             CccccC-----ChhhHHHHHHHHHHHHHHh-hcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH------------
Q psy14136         95 EGEFDW-----DTTTQGAILSSFYWCYILS-QVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL------------  156 (534)
Q Consensus        95 ~~~~~~-----s~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~------------  156 (534)
                      +|.+.+     +.+.+.++-+...+..++. .++.+++++|++|++++-+....+.+..++.++...+            
T Consensus        30 KD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~  109 (472)
T TIGR00769        30 KDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALAD  109 (472)
T ss_pred             hhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHH
Confidence            667665     3468899999888887777 8999999999999999988877777776665444211            


Q ss_pred             -----------------HHHHHHHHHHHHhhhhcchhh-hHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhh
Q psy14136        157 -----------------HYGALIALRSIQGIASGLTWP-AMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLI  217 (534)
Q Consensus       157 -----------------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~  217 (534)
                                       +.|...+.-+...+-...... ....+++|.++.+|-.|..+ +..+.++|.++++.+..++.
T Consensus       110 ~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~  189 (472)
T TIGR00769       110 KLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS  189 (472)
T ss_pred             HHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                             122333444455555555565 78899999999999999999 55899999999998888876


Q ss_pred             hh--------cCCc----hhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhc
Q psy14136        218 AH--------YGWR----SVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILT  285 (534)
Q Consensus       218 ~~--------~gwr----~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (534)
                      +.        ..|.    ..+.+.++.+++...+.+ .+.+....+++..+.+.+      +++++.+.......+.+++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~------~~k~k~k~~~~es~k~i~~  262 (472)
T TIGR00769       190 KLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYW-WVNRNVLTDPRSYNPALK------EKKVKPKMSTMESLKFLVS  262 (472)
T ss_pred             HhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCccccchhhc------cccCCCCCCHHHHHHHHHh
Confidence            32        1231    233333333343333333 332222221111111100      0111111223446778899


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCcccc----chhHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136        286 SPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQT----NGLLTGAPFLCSYLSSVLFCYLADQLFVRNI  355 (534)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~  355 (534)
                      +|.++.+++...+++.....+....-..+.+.+- ++.+    .|.+....++..++..++.+++.+|+|-+..
T Consensus       263 S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~  335 (472)
T TIGR00769       263 SPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTA  335 (472)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            9999888888888877766665544444454332 3322    2333444455555666666888888887643

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>TIGR00898 2A0119 cation transport protein

Probab=98.89  E-value=1.4e-08  Score=106.57  Aligned_cols=136  Identities=15%  Similarity=0.061  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccC
Q psy14136        109 LSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIP  188 (534)
Q Consensus       109 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~  188 (534)
                      ..+..+...++.++.+++.||+|||+++.++.++.+++.++..+......+..++.-++.+++.+...+....+..|.+|
T Consensus       361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p  440 (505)
T TIGR00898       361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP  440 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            34455667788888999999999999999999998888777544432222455556677777777788899999999999


Q ss_pred             CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        189 SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       189 ~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      ++.|++++| ......+|.+++|.+.+ + ...++..++++.++..++..++.+ ++||+
T Consensus       441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet  497 (505)
T TIGR00898       441 TVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPET  497 (505)
T ss_pred             HHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCC
Confidence            999999999 45678899999999888 4 345677788888877777666554 45664

>TIGR00901 2A0125 AmpG-related permease

Probab=98.88  E-value=2.3e-08  Score=99.88  Aligned_cols=154  Identities=16%  Similarity=0.106  Sum_probs=106.6

Q ss_pred             HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-----hhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136        306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-----FVRNIMSLTNIRKVFTAISQVIPALLVMLI  380 (534)
Q Consensus       306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  380 (534)
                      +....|.++++ .|+|..+.+++... .+...+ .++.|++.||+     ||||.+         +..+.++.++....+
T Consensus         7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~---------l~~~~~~~~~~~~~l   74 (356)
T TIGR00901         7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSW---------LVLTQVLLLSLLLIL   74 (356)
T ss_pred             HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHH---------HHHHHHHHHHHHHHH
Confidence            34456777776 79999999988644 444444 88999999998     565532         334444544444444


Q ss_pred             hhcCC--chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh--
Q psy14136        381 GYLGC--NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES--  455 (534)
Q Consensus       381 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~--  455 (534)
                      .+...  +.+.+....++.+.+.+...+...+++.|..|++ |+.+.|+......+|..+++.+.+.+.+.     .+  
T Consensus        75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~-----~g~~  149 (356)
T TIGR00901        75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASP-----EFAN  149 (356)
T ss_pred             HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-----cccc
Confidence            44421  3333333334444555556666778888988755 99999999999999999999999888877     44  


Q ss_pred             ------HHHHHHHHHHHHHHHHHHHHh
Q psy14136        456 ------WRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       456 ------~~~~f~~~~~~~~~~~~~~~~  476 (534)
                            |+..|++.+++.++..+..++
T Consensus       150 ~~~~~~wr~~f~i~ai~~l~~~~~~~~  176 (356)
T TIGR00901       150 TGLITLWGYIFFWTALLILPGLLVTLF  176 (356)
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHH
Confidence                  999999988877765554443

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=98.88  E-value=5.7e-07  Score=90.19  Aligned_cols=329  Identities=14%  Similarity=0.035  Sum_probs=177.4

Q ss_pred             HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH----HH---------HHHHHHHHHHHHHh-h
Q psy14136        105 QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA----AV---------LHYGALIALRSIQG-I  170 (534)
Q Consensus       105 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a----~~---------~~~~~l~~~r~l~G-~  170 (534)
                      .+...-.-.+..+++++..|.+.||..|.+++..+++.--++..+++..    ..         .-...+++.-.+.| +
T Consensus        40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i  119 (432)
T PF06963_consen   40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI  119 (432)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence            3444445566677888999999999999999877766533332222111    10         01111222222222 1


Q ss_pred             hhcchhhhHHHHHhcccC------CCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhh
Q psy14136        171 ASGLTWPAMYALVGHWIP------SNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFL  243 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~------~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~  243 (534)
                      ..=.......++=.||..      ++++.+.++ +--.-.+.-+++|++.|.+.+..+.+....+.++..++..++=+++
T Consensus       120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~  199 (432)
T PF06963_consen  120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL  199 (432)
T ss_pred             HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence            111222333344455642      233344444 2235567889999999999998888888888777777766654444


Q ss_pred             cc----CCCCCCcccchhhhhhhhhcc--Cccc----------cCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q psy14136        244 AF----DAPLKHPRITRKELDYIQENI--EPTI----------VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFI  307 (534)
Q Consensus       244 ~~----~~p~~~~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (534)
                      +.    ..|+-..+.++++.+..++..  .+..          ..-++....|+..+++|.+.......+++. ...++.
T Consensus       200 l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~  278 (432)
T PF06963_consen  200 LARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFG  278 (432)
T ss_pred             HHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCc
Confidence            32    222211111111100000000  0000          000112345666777776654444333333 334455


Q ss_pred             hchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCc-
Q psy14136        308 IPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCN-  386 (534)
Q Consensus       308 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  386 (534)
                      ..+..|+.. .|+++...|.+-+...+.++.+.++..++.+|+|..+.-   .   +....-..+..++...+.....+ 
T Consensus       279 ~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G---~---~~l~~q~~~L~~~v~~~~~~~~~~  351 (432)
T PF06963_consen  279 GLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG---L---WSLWWQWVCLALCVVSFWAPGSPF  351 (432)
T ss_pred             HHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH---H---HHHHHHHHHHHHHHHHHhcCCCCc
Confidence            566778887 599999999999999999999999999999999976542   1   11111111222222222221111 


Q ss_pred             ----hhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136        387 ----VALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       387 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                          ...++......-.+.=..=.....+++|..|+. ||+..|.-+...++...+.-.+
T Consensus       352 ~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  352 SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL  411 (432)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence                111222222222222233334455667777765 9999999999998887665444

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>PRK09848 glucuronide transporter; Provisional

Probab=98.85  E-value=5e-08  Score=100.67  Aligned_cols=126  Identities=17%  Similarity=0.145  Sum_probs=99.9

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW  176 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~  176 (534)
                      .+|.++...++......++..++.++.+++.||+|+|+++.++.++.+++.++..+....+++.+++..++.|+|.+...
T Consensus       258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~  337 (448)
T PRK09848        258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM  337 (448)
T ss_pred             ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence            55666555555555557778889999999999999999999999988888777544332467777778889999999999


Q ss_pred             hhHHHHHhcccCCC-------cchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCC
Q psy14136        177 PAMYALVGHWIPSN-------ERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGW  222 (534)
Q Consensus       177 ~~~~~~i~~~~~~~-------~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gw  222 (534)
                      +...++++|..|.+       ++|...+++ ....+|..+|+.+.+.+.+..|+
T Consensus       338 ~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~  391 (448)
T PRK09848        338 TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY  391 (448)
T ss_pred             HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999999998754       347777755 56779999999999888877666

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=98.84  E-value=2.3e-08  Score=115.76  Aligned_cols=140  Identities=18%  Similarity=0.201  Sum_probs=113.5

Q ss_pred             CccccCChh-hHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         95 EGEFDWDTT-TQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        95 ~~~~~~s~~-~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      ++.+|.+.. +.|++.+...++..++.++.|+++||+++|+++.++.++.+++.++..+.  .+++.++++.++.|++.+
T Consensus       260 ~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~  337 (1146)
T PRK08633        260 KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA--PSLASVLVLFFLFGFSAG  337 (1146)
T ss_pred             HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHH
Confidence            336788888 99999999999999999999999999999999998888888877765443  477888888999999999


Q ss_pred             chhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHH
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIW  236 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~  236 (534)
                      ...+...+++.+.+|+++|++++++. ....+|.++++.+++.+... +++...|++.+.+.++.
T Consensus       338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  402 (1146)
T PRK08633        338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG  402 (1146)
T ss_pred             HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999954 66778887777777665442 34555666655544443

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=98.82  E-value=2.5e-08  Score=96.76  Aligned_cols=140  Identities=17%  Similarity=0.149  Sum_probs=118.5

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      ++++|++..++.++.-...+..+++++++|++.||+|.|+++..++++..+.++..-+.  ..-..+.++-.+.|+..|.
T Consensus       280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~--~~~~~f~i~gll~g~s~G~  357 (438)
T COG2270         280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL--EGELDFWILGLLVGTSLGG  357 (438)
T ss_pred             HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--cccHHHHHHHHHHHHhcch
Confidence            66999999999999999999999999999999999999999999999998887764333  2345566778899999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhhcC-CchhhhhhchhhHHH
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLGAIW  236 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~li~  236 (534)
                      .+..+.++..+.+|+++-++.+|+| ...-.+..+||.+.+.+.+..| -|.-+....++.++.
T Consensus       358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iG  421 (438)
T COG2270         358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIG  421 (438)
T ss_pred             HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence            9999999999999999999999988 4677889999999998887654 566665554444443

>KOG4686|consensus

Probab=98.81  E-value=2.3e-08  Score=91.05  Aligned_cols=138  Identities=14%  Similarity=0.201  Sum_probs=107.4

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAI-CSLLIPQAAVLHYGALIALRSIQGIASG  173 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i-~~~l~~~a~~~~~~~l~~~r~l~G~g~g  173 (534)
                      ++.||+|+...+-+.+.-..-.++..++.|.++||+|++...+.+..+..+ +.....|    +++.=.++..+.|+..+
T Consensus       292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F----t~lsPy~~m~~lGLsys  367 (459)
T KOG4686|consen  292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF----TFLSPYTSMTFLGLSYS  367 (459)
T ss_pred             HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh----hhccHHHHHHHHhhhHH
Confidence            669999999999999999999999999999999999999877766554444 4444222    34444567778899888


Q ss_pred             chhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcC---Cchhhhh-hchhhHHH
Q psy14136        174 LTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYG---WRSVFYT-TGSLGAIW  236 (534)
Q Consensus       174 ~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g---wr~~f~i-~~~~~li~  236 (534)
                      .........++...|+++.|++.| +++..++|-.+.+.+++.+.+.-|   |--+|.+ .+.++++.
T Consensus       368 llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~s  435 (459)
T KOG4686|consen  368 LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTS  435 (459)
T ss_pred             HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHH
Confidence            777778889999999999999999 778999999999999999998744   4444443 33344443

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=98.78  E-value=2.2e-07  Score=96.39  Aligned_cols=178  Identities=17%  Similarity=0.092  Sum_probs=120.4

Q ss_pred             hcCHHHHHHHHHHHHHHHHH----HHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchh
Q psy14136        284 LTSPPAWAIGITTFGRIWVH----YIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLT  359 (534)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~  359 (534)
                      +++++++..+....+.....    ......++...++ .|-+ ....++.....++..+..++.|+++|.+|||..    
T Consensus        37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~----  110 (599)
T PF06609_consen   37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF----  110 (599)
T ss_pred             eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH----
Confidence            45566665544333333222    2222334544444 5655 566788888889999999999999999999865    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHH
Q psy14136        360 NIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLS  438 (534)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~  438 (534)
                            .+.+.++..++.++....+ +....+....+.+.+.+... .....+.|..|.+ |+.+.++.....-....++
T Consensus       111 ------~i~g~~l~vvG~Iv~atA~-~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~  182 (599)
T PF06609_consen  111 ------FIIGSLLGVVGSIVCATAQ-NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWIS  182 (599)
T ss_pred             ------HHHHHHHHHhHHHHhhcCC-cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence                  4677777777777776665 77777777777777666544 3345578888866 8887777665554555567


Q ss_pred             hHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        439 PMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       439 ~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      |.+...+...     .+||+.|++.++...++++..+++.++
T Consensus       183 ~~ia~~~~~~-----~~WRw~~~~~~i~~~i~~vl~~~fY~P  219 (599)
T PF06609_consen  183 PLIAQLFAAH-----SGWRWIFYIFIIWSGIALVLIFFFYFP  219 (599)
T ss_pred             HHHHHHhccC-----CCcchHHHHHHHHHHHHHHHHHHHhCC
Confidence            7777666555     689999999988877777665555443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>KOG2504|consensus

Probab=98.76  E-value=3.7e-08  Score=101.64  Aligned_cols=174  Identities=15%  Similarity=0.111  Sum_probs=136.5

Q ss_pred             HHHHHHHHHHHHHHHHHHh----chhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q psy14136        290 WAIGITTFGRIWVHYIFII----PGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVF  365 (534)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~  365 (534)
                      |.+++..++.....+++..    +.+. +++.++.+..+++++.++......+..++.+.+.||+|.|..          
T Consensus        45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~-~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v----------  113 (509)
T KOG2504|consen   45 WVVVFASFLVNLSTDGLINSFGLLFEE-LMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV----------  113 (509)
T ss_pred             eeeeHhHHHHHHhhhcchheehhhHHH-HHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH----------
Confidence            4445555555444444332    2333 344588888889999999999999999999999999999876          


Q ss_pred             HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        366 TAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      .+++.++..+++++..+...-+...+..-++.+.+.++.+......+...++++|+.+.|+......+|.++-|.+..++
T Consensus       114 ~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l  193 (509)
T KOG2504|consen  114 MIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYL  193 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHH
Confidence            57888888888888888873333444555666777888888888888889999999999999999999999999999999


Q ss_pred             ccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        446 LQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       446 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+.     .||+..++..+.+.+-..+....+++
T Consensus       194 ~~~-----~G~r~~~l~~~~~~l~~~~~~~~~rp  222 (509)
T KOG2504|consen  194 LSK-----YGWRGALLIFGGISLNVLVAGALLRP  222 (509)
T ss_pred             HHH-----hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            999     89999999998888766666665544

>KOG2615|consensus

Probab=98.74  E-value=2.3e-08  Score=95.16  Aligned_cols=116  Identities=20%  Similarity=0.222  Sum_probs=89.0

Q ss_pred             CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q psy14136        320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVT  399 (534)
Q Consensus       320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (534)
                      .+...+|++-+.+.+...+.++..|.++||+|||..+          .++.+..++...+++... +....+..=++.+.
T Consensus        65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvl----------l~c~~~va~s~ll~~~S~-~F~afv~aR~l~Gi  133 (451)
T KOG2615|consen   65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVL----------LACLIGVALSYLLWALSR-NFAAFVLARFLGGI  133 (451)
T ss_pred             ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHH----------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhh
Confidence            3556788999999999999999999999999999763          566666677666666654 44222222344443


Q ss_pred             HhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136        400 LITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQ  447 (534)
Q Consensus       400 ~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~  447 (534)
                      +- .......+++.|+.+++ |+.+++..+....+|.++||.++|++..
T Consensus       134 ~k-gnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  134 FK-GNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             cc-CchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence            33 33455678888988765 9999999999999999999999999987

>KOG0637|consensus

Probab=98.69  E-value=3.1e-07  Score=89.73  Aligned_cols=250  Identities=16%  Similarity=0.112  Sum_probs=145.9

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcc----cCCeehhHHH-HHHHHHHHHHHHHHHH---------------H
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR----FGTKTVFGFS-QLVTAICSLLIPQAAV---------------L  156 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~l~~~-~~~~~i~~~l~~~a~~---------------~  156 (534)
                      ++|++....+.+--+..+...+.+|+.|..+||    |||||.++.. .++.+++.++.+++.-               .
T Consensus        61 ~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~r  140 (498)
T KOG0637|consen   61 SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPR  140 (498)
T ss_pred             HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchH
Confidence            778888888888888888899999999999995    7988766554 5555666666555520               0


Q ss_pred             HHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchh-hhhhh-hhhhhHHHhhhhHHHHhhhhcCCchh--hhhhchh
Q psy14136        157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSR-FMSSF-QGFSFGIGLTYPLCGFLIAHYGWRSV--FYTTGSL  232 (534)
Q Consensus       157 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~-~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~--f~i~~~~  232 (534)
                      ....++++-.+.=++.-.....+-+++.|...++++.+ +++.+ ....+|..+|..+++++    +|+-.  |.....+
T Consensus       141 ai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~~  216 (498)
T KOG0637|consen  141 AIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTAC  216 (498)
T ss_pred             HHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHHH
Confidence            12344455555556666788899999999997777666 77766 57788999988887743    44432  2222222


Q ss_pred             hHHHHHHhhhhc-------cCC------CCCCcccchhhhhhhhhccCccccCCCCCcccHHHhh-cCHHHHHHHHHHHH
Q psy14136        233 GAIWCVAWWFLA-------FDA------PLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSIL-TSPPAWAIGITTFG  298 (534)
Q Consensus       233 ~li~~i~~~~~~-------~~~------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  298 (534)
                      -+.+..+-..+.       .++      |+++++..+.      ...+.+..+..........+. ..|..+.+++...+
T Consensus       217 ~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~------~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~ll  290 (498)
T KOG0637|consen  217 DLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKG------TTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLL  290 (498)
T ss_pred             HHHHHHHHHHHHHhhhhhheecccccccccccCCCCCc------ccccccccCcchHHHHhchHhhCChhHHHHHHHHHH
Confidence            222211111111       111      1111111000      000000000000000001111 23678888888888


Q ss_pred             HHHHHHHHHhchhhhhHh-hhCCccccc----------------hhHhhhHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14136        299 RIWVHYIFIIPGPRYMKT-ILGFSIQTN----------------GLLTGAPFLCSYLSSVLFCYLADQLFVRNIM  356 (534)
Q Consensus       299 ~~~~~~~~~~~~~~~l~~-~~g~s~~~~----------------~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l  356 (534)
                      ...+...+..+...++-+ .++-++...                .+=+.+..+...+.+....++.+|+|-|+.+
T Consensus       291 tW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y  365 (498)
T KOG0637|consen  291 TWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRY  365 (498)
T ss_pred             HHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEE
Confidence            888888887777777643 455443221                1234455667777788888999999955543

>PRK09669 putative symporter YagG; Provisional

Probab=98.68  E-value=3.9e-07  Score=93.90  Aligned_cols=121  Identities=14%  Similarity=0.178  Sum_probs=92.5

Q ss_pred             hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136        103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYAL  182 (534)
Q Consensus       103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~  182 (534)
                      ...+.+.....+...++.+++++++||+|+|+.+..+.++.+++.+...+...++.+.+++..++.|++.+...+...++
T Consensus       264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am  343 (444)
T PRK09669        264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM  343 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456666777888889999999999999999999888776654443222223467778888899999999999999999


Q ss_pred             HhcccCCC-------cchhhhhhh-hhhhhHHHhhhhHHHHhhhhcCCc
Q psy14136        183 VGHWIPSN-------ERSRFMSSF-QGFSFGIGLTYPLCGFLIAHYGWR  223 (534)
Q Consensus       183 i~~~~~~~-------~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr  223 (534)
                      ++|..+.+       +.|...+.+ ....+|..+|+.+++.+.+..|+.
T Consensus       344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~  392 (444)
T PRK09669        344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV  392 (444)
T ss_pred             HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            99998632       234445544 466899999999999998887763

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.67  E-value=1.2e-06  Score=84.72  Aligned_cols=163  Identities=15%  Similarity=0.068  Sum_probs=123.0

Q ss_pred             HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY  382 (534)
Q Consensus       303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (534)
                      ....+.-+-+.+++.++.+..+++++......+..+.++..+++.+|+|+|+.          +.++..+.+++..++..
T Consensus        28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g----------i~lgL~l~avg~~lF~p   97 (422)
T COG0738          28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG----------IVLGLLLYAVGAALFWP   97 (422)
T ss_pred             HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH----------HHHHHHHHHHHHHHHhh
Confidence            34445555667788899999999999999999999999999999999999986          36777777777776643


Q ss_pred             cC--CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc----------
Q psy14136        383 LG--CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD----------  449 (534)
Q Consensus       383 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~----------  449 (534)
                      ..  ..+...+...++.+.+.+........++..+.|++ ...-+.+.+.+..+|++++|.+++.+....          
T Consensus        98 Aa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~  177 (422)
T COG0738          98 AASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI  177 (422)
T ss_pred             hhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence            32  14556666677778888888888899999888765 888899999999999999999999988730          


Q ss_pred             ----ccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        450 ----ETSLESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       450 ----~~~~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                          ......++.++...+.+.++..+...
T Consensus       178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~  207 (422)
T COG0738         178 LAIKGADASSVQFPYLILAGLLVLLAVLIL  207 (422)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence                00012355666666665555444433

>KOG2532|consensus

Probab=98.67  E-value=6.6e-08  Score=98.54  Aligned_cols=154  Identities=19%  Similarity=0.273  Sum_probs=125.3

Q ss_pred             hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHH
Q psy14136        317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG-CNVALVLITWF  395 (534)
Q Consensus       317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  395 (534)
                      .+.++..+-+++.+....+.+++.+..|++.||+|.|+++          ..+.++.++.-++..+.. .+.+.+++.-+
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~----------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~  136 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF----------FISGLISALLTLLTPLAASIGFYLLLVLRF  136 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence            4788889999999999999999999999999999999874          444445555444444432 23445667778


Q ss_pred             HHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        396 VAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      +.|++.+..++........-.|.. |++..++......+|.+++-.+.|++.+.  .  .||+.+|++.+++.++..+++
T Consensus       137 lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~--~GW~sifY~~g~~g~i~~~~w  212 (466)
T KOG2532|consen  137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--S--LGWPSIFYVFGIVGLIWFILW  212 (466)
T ss_pred             HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--C--CCCchHHHHHHHHHHHHHHHH
Confidence            888889999999999999988855 99999999999999999999999999887  2  799999999999998888887


Q ss_pred             HhhcCCcccc
Q psy14136        475 QVLGTSEVQP  484 (534)
Q Consensus       475 ~~~~~~~~~~  484 (534)
                      +.+...++++
T Consensus       213 ~~~~~d~P~~  222 (466)
T KOG2532|consen  213 FLFYSDSPSK  222 (466)
T ss_pred             HHHhcCCccc
Confidence            7776654444

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.64  E-value=1.3e-07  Score=96.94  Aligned_cols=175  Identities=15%  Similarity=0.143  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHH----HHhhhcccchhHHHHHHHHHHHHH
Q psy14136        297 FGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLAD----QLFVRNIMSLTNIRKVFTAISQVI  372 (534)
Q Consensus       297 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~l~~~~~~~~~~~~~~~~  372 (534)
                      +...........+++.|+.+..|.++...+.+.....+...+..++.|.++|    |+||||..         +.++.+.
T Consensus        11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~---------~l~g~i~   81 (428)
T PF13347_consen   11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW---------ILIGAIL   81 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceE---------eehhhHH
Confidence            4445555566678888999989999999999999999999999999999999    78887765         4566666


Q ss_pred             HHHHHHHHhhcCC-------chhHHHHHHHHHHHHhhhcccccchhhhccCCC--chhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136        373 PALLVMLIGYLGC-------NVALVLITWFVAVTLITASYAGAMANVVDIGPN--FAGPILAFAQTIHMTASFLSPMVAG  443 (534)
Q Consensus       373 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~g~~~~~~~~g~~i~~~~~g  443 (534)
                      .++++.++...++       ...+..+..++...+.........++..|+.++  +|.+..+.......+|..+...+.+
T Consensus        82 ~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~  161 (428)
T PF13347_consen   82 LALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP  161 (428)
T ss_pred             HHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            6666666554411       112334444444556666666667788888763  4999999999999898877777777


Q ss_pred             hcccccccCh--hhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        444 YFLQDDETSL--ESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       444 ~l~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      .+.+..+.+.  .+|+...++.+++.+++.++..+..|+
T Consensus       162 ~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke  200 (428)
T PF13347_consen  162 ILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE  200 (428)
T ss_pred             hhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence            7765422111  268888888877777766665555443

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.63  E-value=4.3e-07  Score=91.35  Aligned_cols=177  Identities=14%  Similarity=0.150  Sum_probs=104.5

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ  370 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~  370 (534)
                      .+....+++++....+..+.|.|+++ .|+|..++|.+.+...+..+++.++.|.++||.++++..         ..+..
T Consensus         6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~---------l~~~~   75 (400)
T PF03825_consen    6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI---------LALLS   75 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH---------HHHHH
Confidence            34556667777777788889999998 689999999999999999999999999999998765432         23444


Q ss_pred             HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhh-hhccccc
Q psy14136        371 VIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVA-GYFLQDD  449 (534)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~-g~l~~~~  449 (534)
                      ++.++.+....... +.+......++..++.....|...+...+...+ ++.-.|-....+.+|-.++.... +.+... 
T Consensus        76 l~~~~~~~~~~~~~-~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~-~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~-  152 (400)
T PF03825_consen   76 LLSALALLLLAFSS-SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD-RGKDYGRIRLWGSIGFIVAALAFGGLLGGY-  152 (400)
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc-ccCCCCcchhhhhHHHHHHHHHHHHHHHhh-
Confidence            45555454444444 555555555555555554555555555443332 33334444555555555554332 222222 


Q ss_pred             ccChhhHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136        450 ETSLESWRQVFLIAGAVGSCTYFFYQVLGTSE  481 (534)
Q Consensus       450 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  481 (534)
                       .+..+....+++.+.+.++.....+.+++.+
T Consensus       153 -~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~  183 (400)
T PF03825_consen  153 -LGISGTSLIFYIAAILSLLLAGFALFLPKTP  183 (400)
T ss_pred             -hccccccHHHHHHHHHHHHHHHHHHhCCCCc
Confidence             1002233345555554444444444455443

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=98.61  E-value=1.9e-07  Score=90.37  Aligned_cols=133  Identities=29%  Similarity=0.548  Sum_probs=106.7

Q ss_pred             hhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHH
Q psy14136        103 TTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYAL  182 (534)
Q Consensus       103 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~  182 (534)
                      .+.++..+.+.++..++.++.|+++||+|||+.+..+.....++.+++.+....+.+.+++.|+++|++.+...+...++
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  118 (338)
T COG0477          39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL  118 (338)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            57899999999999999999999999999998888888765565555544431248999999999999999999999999


Q ss_pred             HhcccCC-Ccchhhhh-hhh-hhhhHHHhhhhHHHHhhhh--cCCchhhhhhchhhHH
Q psy14136        183 VGHWIPS-NERSRFMS-SFQ-GFSFGIGLTYPLCGFLIAH--YGWRSVFYTTGSLGAI  235 (534)
Q Consensus       183 i~~~~~~-~~r~~~~~-~~~-~~~~G~~~g~~l~~~l~~~--~gwr~~f~i~~~~~li  235 (534)
                      +.++.|+ ++|+...+ ... ...+|..+++.+++.+...  .+||..|.+.......
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (338)
T COG0477         119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL  176 (338)
T ss_pred             HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            9999987 67888888 445 4677888888777766654  5799977666555443

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.61  E-value=8.4e-07  Score=92.17  Aligned_cols=175  Identities=11%  Similarity=0.072  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH----hhhcccchhHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL----FVRNIMSLTNIRKVFT  366 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~l~~~~~~~~~~  366 (534)
                      ...+..+..+.....+..+++.|+.+..|+++..+|.++.+..+...+..++.|+++||.    ||||..         +
T Consensus        10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~---------i   80 (473)
T PRK10429         10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW---------I   80 (473)
T ss_pred             hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh---------H
Confidence            334444555666777788899999999999999999999999999999999999999954    776543         4


Q ss_pred             HHHHHHHHHHHHHHhhcCC---c--hhHHHHHHHHHHHHhhhcccccchhhhccCC--CchhHHHHHHhHHHHhhhhHHh
Q psy14136        367 AISQVIPALLVMLIGYLGC---N--VALVLITWFVAVTLITASYAGAMANVVDIGP--NFAGPILAFAQTIHMTASFLSP  439 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~g~~~~~~~~g~~i~~  439 (534)
                      .++.+..++.+.++...+.   .  ..+..+..++...+.........+...|+.+  ++|.+..+......++|+.+.+
T Consensus        81 l~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~  160 (473)
T PRK10429         81 LIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTA  160 (473)
T ss_pred             hhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555555555444433221   1  1233333344445555666666777788764  4499989887777777766665


Q ss_pred             Hhhhhcccccc--cChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        440 MVAGYFLQDDE--TSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       440 ~~~g~l~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      .+...+.+..+  ....+|.....+.+++.+++.+..
T Consensus       161 ~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~  197 (473)
T PRK10429        161 GFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIIT  197 (473)
T ss_pred             HHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence            55443322100  111356666556555555444433

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.58  E-value=1.5e-06  Score=87.02  Aligned_cols=182  Identities=11%  Similarity=0.094  Sum_probs=133.1

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ  370 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~  370 (534)
                      ...+.-+...+.......|+..|+.+..|+++..+|.++.+.-+...+.-++.|.++||..+|...     ++++++.+.
T Consensus        16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr-----fRP~lL~g~   90 (467)
T COG2211          16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR-----FRPWLLWGA   90 (467)
T ss_pred             hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc-----ccHHHHHHh
Confidence            344455556667777788999999999999999999999999999999999999999987765543     455566666


Q ss_pred             HHHHHHHHHHhhcC-----CchhHHHHHHHHHHHHhhhcccccchhhhccCC--CchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136        371 VIPALLVMLIGYLG-----CNVALVLITWFVAVTLITASYAGAMANVVDIGP--NFAGPILAFAQTIHMTASFLSPMVAG  443 (534)
Q Consensus       371 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~g~~~~~~~~g~~i~~~~~g  443 (534)
                      +..++...+....+     ....+..+...+...+......+..++..++.+  ++|.+..+.-.....+|..+...+.+
T Consensus        91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~  170 (467)
T COG2211          91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFP  170 (467)
T ss_pred             HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66665555554444     245566666777777777777777778777664  55999999999999999887777766


Q ss_pred             hcccccccC--hhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        444 YFLQDDETS--LESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       444 ~l~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .+....+.+  ..||+....+.+++.++..+..++-
T Consensus       171 plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~  206 (467)
T COG2211         171 PLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFN  206 (467)
T ss_pred             HHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            665542221  3577777777777766666555544

>KOG0254|consensus

Probab=98.54  E-value=1.3e-06  Score=91.76  Aligned_cols=143  Identities=16%  Similarity=0.152  Sum_probs=115.6

Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhc
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      .+++.+...++..++.++.|+++|++|||+.+          .++.+...++.++..... +...+.+.-++.+++.|..
T Consensus        91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l----------~~~~~~~~iG~ii~~~a~-~~~~l~~GR~l~G~g~G~~  159 (513)
T KOG0254|consen   91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTL----------LLAVVLFLIGAIIIALAP-SWYQLIVGRILTGLGVGGA  159 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhccchhhh
Confidence            37999999999999999999999999999764          566666667777777776 8888899999999999999


Q ss_pred             ccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        405 YAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       405 ~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      ......+..|+.|++ ||...+..+....+|..++ .+.+.....  .. .+|+..+.+..+..++..+..++.++..+
T Consensus       160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~--~~-~~Wr~~~~~~~i~~~~~~~~~~~~pesp~  234 (513)
T KOG0254|consen  160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSK--VY-AGWRIPLGLALIPAVILALGMLFLPESPR  234 (513)
T ss_pred             hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhcc--CC-ccHHHHHHHHHHHHHHHHHHHHhCCCChH
Confidence            989999999999986 9999999999998877777 666666555  11 48998888887777777776555565433

>PRK11462 putative transporter; Provisional

Probab=98.54  E-value=1.9e-06  Score=88.98  Aligned_cols=176  Identities=11%  Similarity=-0.014  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q psy14136        294 ITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIP  373 (534)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~  373 (534)
                      +.-+..+.....+..|+..|+.+..|+++..+|.+..+.-+...+.-++.|+++||...|.-.     |+..+.++.+..
T Consensus        16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr-----~rp~il~g~i~~   90 (460)
T PRK11462         16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK-----FRPWVLFGALPF   90 (460)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC-----cchhHhHHHHHH
Confidence            344445556666778889999999999999999999999999999999999999986443222     233355565555


Q ss_pred             HHHHHHHhhcCC-c----hhHHHHHHHHHHHHhhhcccccchhhhccCC--CchhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136        374 ALLVMLIGYLGC-N----VALVLITWFVAVTLITASYAGAMANVVDIGP--NFAGPILAFAQTIHMTASFLSPMVAGYFL  446 (534)
Q Consensus       374 ~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~  446 (534)
                      ++...++...+. +    ..+..+..++...+......+..++..|+.+  ++|.+..+.......+|..+++.+...+.
T Consensus        91 ~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv  170 (460)
T PRK11462         91 GIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV  170 (460)
T ss_pred             HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555544433321 1    2334444444555666666666777778776  34999999999999988888777655544


Q ss_pred             cccc--cChhhHHHHHHHHHHHHHHHHHHH
Q psy14136        447 QDDE--TSLESWRQVFLIAGAVGSCTYFFY  474 (534)
Q Consensus       447 ~~~~--~~~~~~~~~f~~~~~~~~~~~~~~  474 (534)
                      ...+  ....+|.....+.+++.+++..+.
T Consensus       171 ~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~  200 (460)
T PRK11462        171 NLIGGDNKPLGFQGGIAVLSVVAFMMLAFC  200 (460)
T ss_pred             HHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence            3311  111356666666665554444433

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.50  E-value=1.4e-06  Score=80.65  Aligned_cols=136  Identities=19%  Similarity=0.189  Sum_probs=92.8

Q ss_pred             HHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136        301 WVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI  380 (534)
Q Consensus       301 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  380 (534)
                      ...|.+..|.|.. ++.+|+|.++...+.....++..+ .+..|.+.||++.+..+          .++.+...++...+
T Consensus        16 Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l----------~iG~~~~~~GY~~~   83 (250)
T PF06813_consen   16 GTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVL----------LIGAVLGFVGYGLL   83 (250)
T ss_pred             CcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHH----------HHHHHHHHHHHHHH
Confidence            3455566666655 556999999999998888888876 48899999999987653          45555555555443


Q ss_pred             hhc--C----CchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        381 GYL--G----CNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       381 ~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ...  .    .+.+...+..++.+.+.............+.+|++||++.|+.-....+++.+-..+...+.+.
T Consensus        84 ~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen   84 WLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             HHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            332  1    1233333333444333333334444555578899999999999999999999888887777666

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.49  E-value=2.9e-06  Score=80.87  Aligned_cols=144  Identities=12%  Similarity=0.050  Sum_probs=112.6

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLT  175 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~  175 (534)
                      |-|+|..+.|++.+...+..+..++....+++|. .+|+..+...+++.+|...+.++..++++..   -++.|+|.|..
T Consensus       237 ~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~  313 (395)
T COG2807         237 DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGA  313 (395)
T ss_pred             HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchH
Confidence            7799999999999999999999999999999975 5778888888888887776555543333322   48999999999


Q ss_pred             hhhHHHHHhcccCCCcchhhhh-hh-hhhhhHHHhhhhHHHHhhhhc-CCchhhhhhchhhHHHHHHhhhh
Q psy14136        176 WPAMYALVGHWIPSNERSRFMS-SF-QGFSFGIGLTYPLCGFLIAHY-GWRSVFYTTGSLGAIWCVAWWFL  243 (534)
Q Consensus       176 ~~~~~~~i~~~~~~~~r~~~~~-~~-~~~~~G~~~g~~l~~~l~~~~-gwr~~f~i~~~~~li~~i~~~~~  243 (534)
                      ++.+..++.+-.+..+..-..+ +. ....+=..+||.+.|++-+.. +|+...+..+...++..+.-+..
T Consensus       314 F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a  384 (395)
T COG2807         314 FPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA  384 (395)
T ss_pred             HHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999887666555444 44 345566778999999998874 69999988877776665555443

>TIGR00788 fbt folate/biopterin transporter

Probab=98.47  E-value=2.7e-06  Score=87.98  Aligned_cols=179  Identities=14%  Similarity=0.064  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHh---hhcccchhHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLF---VRNIMSLTNIRK  363 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~---~~~~l~~~~~~~  363 (534)
                      +....+...++..... ......++.++++.+|.+..+.+.+.+...+...+-.+ .|.++||++   +|        |+
T Consensus        26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~r--------Rr   95 (468)
T TIGR00788        26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYT--------KR   95 (468)
T ss_pred             hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCcc--------ch
Confidence            3344555566777777 77777888888888999999998888888888777555 999999995   22        22


Q ss_pred             HHHHHHHHHH-HHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchh---HHHHHHhHHHHhhhhHHh
Q psy14136        364 VFTAISQVIP-ALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAG---PILAFAQTIHMTASFLSP  439 (534)
Q Consensus       364 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g---~~~g~~~~~~~~g~~i~~  439 (534)
                      +.+.++.++. .+.+..+...+..........++..++.+..-.....+..|..+++++   ...++......+|..+++
T Consensus        96 ~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~  175 (468)
T TIGR00788        96 WYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISS  175 (468)
T ss_pred             HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHH
Confidence            3344444444 233333333232223333345555666666666677777777663333   334444444568999999


Q ss_pred             HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      .+.|.+.+.     .+|+..|++.+++.++..+..++++++
T Consensus       176 ~l~G~l~~~-----~~~~~~f~~~a~l~ll~~~~~~~~~E~  211 (468)
T TIGR00788       176 LLGGPLLDK-----TLTRILFLITAALLLLQLFVSNLSKER  211 (468)
T ss_pred             HHHHHHHHh-----cCcchHHHHHHHHHHHHHHHHHhcccc
Confidence            999999988     789999999888877775555555543

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG3762|consensus

Probab=98.46  E-value=1.9e-07  Score=92.85  Aligned_cols=145  Identities=18%  Similarity=0.189  Sum_probs=125.7

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      -+|++-.+.-.|.....-..+-.+.-++.+++..|+|+-+++..++...++=.+..++.  +|.|..+-..+++|+..+.
T Consensus       398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--~n~W~vLPieilqgit~al  475 (618)
T KOG3762|consen  398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--QNPWMVLPIEILQGITHAL  475 (618)
T ss_pred             HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--cCchheeeHHHHHHHHHHH
Confidence            34666667777777777778888888899999999999999999999998887774444  7999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhhhh--hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhh
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMSSF--QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWW  241 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~~~--~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~  241 (534)
                      .|.+..+++++..||+-|..+.++.  ...++|-.+|+++||.+.+.+|=|..|.+.++.+++..+...
T Consensus       476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~  544 (618)
T KOG3762|consen  476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI  544 (618)
T ss_pred             HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999944  467899999999999999999999999999888887665544

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.43  E-value=1.6e-08  Score=104.44  Aligned_cols=146  Identities=18%  Similarity=0.249  Sum_probs=108.8

Q ss_pred             chhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHhh
Q psy14136        325 NGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG--CNVALVLITWFVAVTLIT  402 (534)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  402 (534)
                      .++..+...++.++|+++.|++.||+|||+.+          .++..+..++.++..+.+  .+.+...+.-++.+++.|
T Consensus        48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g  117 (451)
T PF00083_consen   48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPAL----------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIG  117 (451)
T ss_pred             HHHHHHHHHhhhcccccccccccccccccccc----------cccccccccccccccccccccccccccccccccccccc
Confidence            56778888999999999999999999999875          455555555555555543  245666677777888888


Q ss_pred             hcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136        403 ASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSE  481 (534)
Q Consensus       403 ~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  481 (534)
                      ...+....++.|..|++ |+...++.+....+|..++..+.-.+.+.  .+..+|+..+++.++..++..+...+++|..
T Consensus       118 ~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP  195 (451)
T PF00083_consen  118 GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY--SDNWGWRILLIFGAIPSLLVLLLRFFLPESP  195 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence            88999999999998866 99999999998888888877765444332  1114688888888877766666666666654


Q ss_pred             c
Q psy14136        482 V  482 (534)
Q Consensus       482 ~  482 (534)
                      +
T Consensus       196 ~  196 (451)
T PF00083_consen  196 R  196 (451)
T ss_pred             c
Confidence            3

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG3574|consensus

Probab=98.40  E-value=2e-05  Score=75.29  Aligned_cols=329  Identities=10%  Similarity=0.011  Sum_probs=170.7

Q ss_pred             ccCChhhHHHHHHHHHHHHHHhhcccchhhc-----ccCCeehh-HHHHHHHHHHHHHHHHH---------HHHHHHHHH
Q psy14136         98 FDWDTTTQGAILSSFYWCYILSQVVGGVLTQ-----RFGTKTVF-GFSQLVTAICSLLIPQA---------AVLHYGALI  162 (534)
Q Consensus        98 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grr~~l-~~~~~~~~i~~~l~~~a---------~~~~~~~l~  162 (534)
                      =|.|.++.+...-++ ..+ ..-+.+.++.|     |+||||.- .-+..+.+....+.+.-         ..++...+.
T Consensus        60 k~vSyt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt  137 (510)
T KOG3574|consen   60 KGVSYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALT  137 (510)
T ss_pred             CCcchhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHH
Confidence            356666666543322 222 23467888899     99998853 33444433333332110         112223333


Q ss_pred             HHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-----h--cCCc---------hh
Q psy14136        163 ALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-----H--YGWR---------SV  225 (534)
Q Consensus       163 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-----~--~gwr---------~~  225 (534)
                      ..-++.-+..+....+.-.+.-.+..+++.|-+...+ .+.+.|..++..+.-.+..     .  .+|.         ..
T Consensus       138 ~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy  217 (510)
T KOG3574|consen  138 LLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGY  217 (510)
T ss_pred             HHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHH
Confidence            3445555666666777777777778788877766644 3555665555433222221     1  2333         22


Q ss_pred             hhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHH
Q psy14136        226 FYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYI  305 (534)
Q Consensus       226 f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (534)
                      .++.+.+.++...+..+.-+|.++..   ++++...           .+..-.-++++++-|.+..++......-.++.+
T Consensus       218 ~~fwg~~~~vat~Lv~~~kke~~~~~---~~e~~~~-----------i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a  283 (510)
T KOG3574|consen  218 LWFWGALFIVATTLVALLKKENDESV---DEELELG-----------IHESYKLLRDVLKLKSVRWLAGILLTGKLGFQA  283 (510)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCchhh---hhhhhcC-----------HHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhh
Confidence            34445555555555554433332221   0111000           011112346677778887777777777777777


Q ss_pred             HHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhh-hcccchhHHHHHHHHHHHHHHHHHH-HHHhhc
Q psy14136        306 FIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFV-RNIMSLTNIRKVFTAISQVIPALLV-MLIGYL  383 (534)
Q Consensus       306 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~-~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~  383 (534)
                      -....+.-+.| .|.+..+.+++..+    .++..+..+++..|+.. ++.+.. ..|.....+........+ ......
T Consensus       284 ~da~t~LkLle-~Gv~ke~Lal~~v~----~~plqI~l~~~~gk~ta~~~pl~~-~lka~~~R~~~~~~~t~Lv~~~~~~  357 (510)
T KOG3574|consen  284 ADALTSLKLLE-HGVPKEELALIAVP----LVPLQIALPLYIGKWTAGPRPLNV-FLKAVPYRLGGGLVQTALVWWTPTL  357 (510)
T ss_pred             hhhccchHHHH-cCCChhHheeeeee----hhhHHHhhhhhheeecCCCCcchH-HHHhhhHHHHHHHHHHHHHhhhccc
Confidence            77777877877 79998887766544    44444444444444432 111111 111111122222222222 222222


Q ss_pred             CC---c--hhHHHHH---HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        384 GC---N--VALVLIT---WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       384 ~~---~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      ..   .  ....++.   ..+..+.....+...++..+.+.++. .|+.+.+.|+..++|+-.-..+..++.|.
T Consensus       358 ~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~  431 (510)
T KOG3574|consen  358 GHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADG  431 (510)
T ss_pred             ccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhccc
Confidence            11   1  1111111   22222222333334455566777766 99999999999999998877788788775

>KOG0253|consensus

Probab=98.39  E-value=2.6e-07  Score=87.52  Aligned_cols=128  Identities=15%  Similarity=0.181  Sum_probs=94.2

Q ss_pred             HHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcchhhhHHHHHhcccCCC
Q psy14136        113 YWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHY--GALIALRSIQGIASGLTWPAMYALVGHWIPSN  190 (534)
Q Consensus       113 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~--~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~  190 (534)
                      .+.-.-|.++.+++.||+|||+.+..+.+++++..++.-.....+.  .++..+|++    .++.+.+.+.+..|.+|.+
T Consensus       391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYvYtPEVyPTa  466 (528)
T KOG0253|consen  391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYVYTPEVYPTA  466 (528)
T ss_pred             HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEEecCcccchh
Confidence            3444567788999999999999999999999998887533322222  233445544    4455677888999999999


Q ss_pred             cchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccC
Q psy14136        191 ERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFD  246 (534)
Q Consensus       191 ~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~  246 (534)
                      -|+...| ..+..-+|+++.|.++  +....+-..+..+.+.+.++..+...++.-|
T Consensus       467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiE  521 (528)
T KOG0253|consen  467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIE  521 (528)
T ss_pred             hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeec
Confidence            9999999 5578889999999988  3333345566667778888877777766434

>KOG0255|consensus

Probab=98.39  E-value=2e-06  Score=90.67  Aligned_cols=146  Identities=18%  Similarity=0.236  Sum_probs=118.0

Q ss_pred             hCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q psy14136        318 LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVA  397 (534)
Q Consensus       318 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (534)
                      ...+.....+..++..++..+|.++.|.++||+|||+.+          .+++++..++-+...+.+ +.+...+.-++.
T Consensus       113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~----------~~~~~~~~i~~~~~a~a~-~~~~~~~~Rfl~  181 (521)
T KOG0255|consen  113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVL----------LVSLLLFIIFGILTAFAP-NYWMFLIFRFLS  181 (521)
T ss_pred             eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHH----------HHHHHHHHHHHHHHHHhC-cHHHHHHHHHHH
Confidence            456667778888999999999999999999999999874          566677777777777776 888888888999


Q ss_pred             HHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        398 VTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      +++.+........+..|..+++ |+.+..+ ......++.+++...+++...       |+..+++..+..++.++..++
T Consensus       182 G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~-------Wr~~~~~~~~~~~~~~~~~~l  253 (521)
T KOG0255|consen  182 GFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRD-------WRWLFWIISIPSGLFLLLWFL  253 (521)
T ss_pred             HhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHHHc
Confidence            9999988888999999987655 9999999 888888899999998887664       888998888877766666444


Q ss_pred             hcCCcc
Q psy14136        477 LGTSEV  482 (534)
Q Consensus       477 ~~~~~~  482 (534)
                      .+|..+
T Consensus       254 ~~Es~r  259 (521)
T KOG0255|consen  254 PPESPR  259 (521)
T ss_pred             cCcChH
Confidence            334433

>KOG3810|consensus

Probab=98.33  E-value=6.3e-06  Score=77.67  Aligned_cols=344  Identities=11%  Similarity=0.061  Sum_probs=198.7

Q ss_pred             HHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhh
Q psy14136        117 ILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFM  196 (534)
Q Consensus       117 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~  196 (534)
                      .+.-.+.=.+.|..-.|++++.-.+.......+  +...++.+.+=+.-+..|...+ ...+-++++-+..+|+++.++.
T Consensus        56 Lv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~--lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt  132 (433)
T KOG3810|consen   56 LVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIM--LVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVT  132 (433)
T ss_pred             HHHHHHHHHHhhhhhcceeeeeeccchhHHHHH--HHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHH
Confidence            334444456889999999887766665555555  3344688888889999999865 5788899999999999999999


Q ss_pred             h-hhhhhhhHHHhhhhHHHHhhhhc--CCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCcc--cc
Q psy14136        197 S-SFQGFSFGIGLTYPLCGFLIAHY--GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPT--IV  271 (534)
Q Consensus       197 ~-~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~  271 (534)
                      + .-+..-.|...|..++-.+...-  +++..=.+.-. ........-.++|..+++.....++++.. ..+.++.  +.
T Consensus       133 ~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~-~~~ia~~~A~fLP~v~rSl~f~~~~~~~~-v~~~e~~~~~~  210 (433)
T KOG3810|consen  133 GYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLA-EVTIAVLLALFLPRVKRSLYFHRLEDKIS-VGDLEEMNPQA  210 (433)
T ss_pred             HHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHH-HHHHHHHHHhhCCCCchhhhhhcccccce-eccchhcCccc
Confidence            9 55777777777777777776542  23332223222 22223333445555443221111111110 0000000  00


Q ss_pred             CCCC--------CcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC-CccccchhHhhhHHHHHHHHHHH
Q psy14136        272 GSKG--------LKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG-FSIQTNGLLTGAPFLCSYLSSVL  342 (534)
Q Consensus       272 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~s~~~~~~~~~~~~~~~~~~~~~  342 (534)
                      +..+        -...+.+..++|++....+-+.+...+++.+..+.-..-.+... -.....|..=....+.+.++.+.
T Consensus       211 ~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~  290 (433)
T KOG3810|consen  211 SYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALA  290 (433)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHH
Confidence            0000        01123344567777666666666666666666665544444211 11112344455566777778888


Q ss_pred             HHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhh-ccCCCchh
Q psy14136        343 FCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVV-DIGPNFAG  421 (534)
Q Consensus       343 ~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~g  421 (534)
                      .|.+--.+.|..        ...+.++.+..+..++.+.... +.|+..+..++.........+.....++ ++..+.-|
T Consensus       291 ~g~l~i~w~r~g--------~~ll~~~s~~~agllf~m~~t~-~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~g  361 (433)
T KOG3810|consen  291 AGYLNINWNRWG--------DLLLAVGSAVQAGLLFIMAQTQ-HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFG  361 (433)
T ss_pred             HHheeeccchhh--------HHHHHHHHHHhhhhhhhhhccc-ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhe
Confidence            887765555442        2345666666676777777766 7787777777776666665555544444 44445588


Q ss_pred             HHHHHHhHHHHhhhhHHhHhhhhcccccc------cChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        422 PILAFAQTIHMTASFLSPMVAGYFLQDDE------TSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       422 ~~~g~~~~~~~~g~~i~~~~~g~l~~~~~------~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ..+|+.+++.-+-..+-..+   +.|..+      +...-|..-|.+.+++.+++..+....
T Consensus       362 LvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~  420 (433)
T KOG3810|consen  362 LVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM  420 (433)
T ss_pred             eeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence            99998887766655554443   334201      111224445777777777776654443

>KOG2533|consensus

Probab=98.30  E-value=2.3e-06  Score=87.59  Aligned_cols=154  Identities=13%  Similarity=0.147  Sum_probs=115.2

Q ss_pred             hhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHH
Q psy14136        316 TILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWF  395 (534)
Q Consensus       316 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (534)
                      +..+....+.+.+.+++.++.+++.+.++.+.||++..+.+          ....++-++...+..... +.+..++.-+
T Consensus        74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l----------~~~~~~w~~~~~~~~~~~-s~~~~ialr~  142 (495)
T KOG2533|consen   74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGL----------SVSGILWGLFGFLTAAVH-SFPGLIALRF  142 (495)
T ss_pred             cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHH----------HHHHHHHHHHHHHHHHHh-hhHHHHHHHH
Confidence            44667778899999999999999999999999999954332          122222222222222233 7778888889


Q ss_pred             HHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc-ccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        396 VAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD-ETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      +.+.+.+..+|....++...+.+. ||..+|+..+...+|+++|+++...+.... ..+..||++.|++-+++.++..++
T Consensus       143 llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~  222 (495)
T KOG2533|consen  143 LLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV  222 (495)
T ss_pred             HHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence            999999999999999999988755 999999999999999999999987764321 122479999999999888776665


Q ss_pred             HHh-hcCC
Q psy14136        474 YQV-LGTS  480 (534)
Q Consensus       474 ~~~-~~~~  480 (534)
                      .++ ++..
T Consensus       223 ~f~~lp~~  230 (495)
T KOG2533|consen  223 VFFFLPDN  230 (495)
T ss_pred             EEEEecCC
Confidence            544 4443

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=98.21  E-value=1e-06  Score=65.97  Aligned_cols=73  Identities=11%  Similarity=0.184  Sum_probs=65.6

Q ss_pred             ccCCCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14136         86 LLEKPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGA  160 (534)
Q Consensus        86 ~~~~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~  160 (534)
                      +.|.|.+|. ++|.++|.++.||+.+..++||.+|++...++.++..+++.+..++++..+..+.+++.  ++++.
T Consensus         9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~--~~~~~   82 (85)
T PF06779_consen    9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT--HSFWL   82 (85)
T ss_pred             HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hchHH
Confidence            467889999 99999999999999999999999999999999999999999999999999999987776  34443

Note that many members are hypothetical proteins.

>KOG0252|consensus

Probab=98.13  E-value=8.4e-06  Score=79.97  Aligned_cols=109  Identities=12%  Similarity=0.164  Sum_probs=75.1

Q ss_pred             CccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc--CCc----hhHHHHH
Q psy14136        320 FSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL--GCN----VALVLIT  393 (534)
Q Consensus       320 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~  393 (534)
                      ++....+.+.....++.++|+++.|++.||+|||+++.          ..+++..++-++.+..  ...    ..++...
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG----------~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~  150 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYG----------KELIIMIICSALSGLSVGTTSPLGVMMTLCFF  150 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhh----------HHHHHHHHHHHHhccCCCCCCCcchhhHHHHH
Confidence            45566777888888999999999999999999998862          2222222222222222  112    2344455


Q ss_pred             HHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHH
Q psy14136        394 WFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLS  438 (534)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~  438 (534)
                      =.+.+++.|.=+|...+..+|...++ ||.-.++..+.+.+|...|
T Consensus       151 R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG  196 (538)
T KOG0252|consen  151 RFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG  196 (538)
T ss_pred             HHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence            56778888899999999999988766 9998887777666554433

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=98.11  E-value=1.3e-05  Score=80.40  Aligned_cols=109  Identities=14%  Similarity=0.228  Sum_probs=86.5

Q ss_pred             ehhHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCc---chhhhh-hhhhh
Q psy14136        134 TVFGFSQLVTAICSLLIPQAAVLH-------YGALIALRSIQGIASGLTWPAMYALVGHWIPSNE---RSRFMS-SFQGF  202 (534)
Q Consensus       134 ~~l~~~~~~~~i~~~l~~~a~~~~-------~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~---r~~~~~-~~~~~  202 (534)
                      |+++++.++..+|.++..++..+.       .+.++++-++.++|.|+.-|...++++|.+++++   |.+.+. .|.+.
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i   81 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI   81 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            567889999999998865553332       3578889999999999999999999999998763   455666 55899


Q ss_pred             hhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhh
Q psy14136        203 SFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWF  242 (534)
Q Consensus       203 ~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~  242 (534)
                      ++|..++..+.+++-+++||.+.|.+.++..++..+..+.
T Consensus        82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~  121 (372)
T PF00854_consen   82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS  121 (372)
T ss_dssp             HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998877776555443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG2325|consensus

Probab=98.09  E-value=3.7e-05  Score=77.52  Aligned_cols=185  Identities=12%  Similarity=0.055  Sum_probs=111.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchhhhhHh-hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhh-hcccchhHHHHHH
Q psy14136        288 PAWAIGITTFGRIWVHYIFIIPGPRYMKT-ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFV-RNIMSLTNIRKVF  365 (534)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~-~~~l~~~~~~~~~  365 (534)
                      .+++..+..++.......+..-.-.|+++ ..+-+....|++.+...++..++++..|+...|.+. |+.+         
T Consensus        35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl---------  105 (488)
T KOG2325|consen   35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL---------  105 (488)
T ss_pred             hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH---------
Confidence            44555555555555555444445566665 245666778999999999999999999999999885 4432         


Q ss_pred             HHHHHHHHHHHHHHH---hhcCC-chhHHHHHHHHHHHHhhhcccccchhhhcc-CCCchhHHHHHHhHHHHhhhhHHhH
Q psy14136        366 TAISQVIPALLVMLI---GYLGC-NVALVLITWFVAVTLITASYAGAMANVVDI-GPNFAGPILAFAQTIHMTASFLSPM  440 (534)
Q Consensus       366 ~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~g~~~g~~~~~~~~g~~i~~~  440 (534)
                       +.+.++..++-++.   ...+. ..++.++.-++.|++.+. ....-.++++. .+++|.++++.......+|.++||.
T Consensus       106 -i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~  183 (488)
T KOG2325|consen  106 -IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT  183 (488)
T ss_pred             -HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence             45555555444443   33343 233333333443333222 22334556653 4566888888888877778777777


Q ss_pred             hhhhccccc--------ccChhhHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q psy14136        441 VAGYFLQDD--------ETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQ  483 (534)
Q Consensus       441 ~~g~l~~~~--------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  483 (534)
                      +...+....        +....-|..+-|+++++.++.++...+..++..+
T Consensus       184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~  234 (488)
T KOG2325|consen  184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR  234 (488)
T ss_pred             HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence            654443221        0112346777788888887777776665544443

>KOG1237|consensus

Probab=98.06  E-value=0.00038  Score=72.87  Aligned_cols=147  Identities=15%  Similarity=0.195  Sum_probs=111.9

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHH-H----------------
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAV-L----------------  156 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~-~----------------  156 (534)
                      ..++|.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..+|..+..+... +                
T Consensus        65 t~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c  144 (571)
T KOG1237|consen   65 TLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVC  144 (571)
T ss_pred             HHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcc
Confidence            457888888888888888888889999999999986 8999999999999988665433210 0                


Q ss_pred             ------HHHHHHHHHHHHhhhhcchhhhHHHHHhcccC---CCcch---hhhh-hhhhhhhHHHhhhhHHHHhhhhcCCc
Q psy14136        157 ------HYGALIALRSIQGIASGLTWPAMYALVGHWIP---SNERS---RFMS-SFQGFSFGIGLTYPLCGFLIAHYGWR  223 (534)
Q Consensus       157 ------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~---~~~r~---~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr  223 (534)
                            -...+..+.-+..+|.|..-|...++=+|-++   ++++.   ..+. .+...++|..++..+..+.-+..||.
T Consensus       145 ~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~  224 (571)
T KOG1237|consen  145 ESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWK  224 (571)
T ss_pred             cCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccce
Confidence                  12356667778888999999999999999998   32222   3444 33567888888888777777789999


Q ss_pred             hhhhhhchhhHHHHHHhh
Q psy14136        224 SVFYTTGSLGAIWCVAWW  241 (534)
Q Consensus       224 ~~f~i~~~~~li~~i~~~  241 (534)
                      +.|.+..+...++.++.+
T Consensus       225 lgf~i~~~~~~lai~iF~  242 (571)
T KOG1237|consen  225 LGFGIPTVLNALAILIFL  242 (571)
T ss_pred             eeccHHHHHHHHHHHHHH
Confidence            999988777666555443

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.06  E-value=6.6e-05  Score=79.99  Aligned_cols=168  Identities=14%  Similarity=0.060  Sum_probs=117.7

Q ss_pred             HHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhHHHHHHHHHHHHHHHHHHHHHh
Q psy14136        303 HYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTNIRKVFTAISQVIPALLVMLIG  381 (534)
Q Consensus       303 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  381 (534)
                      ++++...+..|+.+.+|++...+..+........-+..+++|+++|+ +|+++.+          .++.++..++..++.
T Consensus         3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI----------l~~~ii~~lG~~lla   72 (654)
T TIGR00926         3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI----------LYLSIVYVVGHALLS   72 (654)
T ss_pred             eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHHH
Confidence            45566667778887789999888888888888888899999999997 4665542          344444444444443


Q ss_pred             hcCC-------chhHHHHHHHHHHHHhhhcccccchhhhccCCC----chhHHHHHHhHHHHhhhhHHhHhhhhcccccc
Q psy14136        382 YLGC-------NVALVLITWFVAVTLITASYAGAMANVVDIGPN----FAGPILAFAQTIHMTASFLSPMVAGYFLQDDE  450 (534)
Q Consensus       382 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~  450 (534)
                      ....       .....++++.+...+.|..-+...+...+.+++    .+-..+.+.....++|+.+++.+.+++.+...
T Consensus        73 i~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~  152 (654)
T TIGR00926        73 FGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVG  152 (654)
T ss_pred             hccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3211       112345566666777778788888888776542    26778888999999999999999998864300


Q ss_pred             --cChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        451 --TSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       451 --~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                        ....+|..+|.+.+++++++.+++...++.
T Consensus       153 ~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~  184 (654)
T TIGR00926       153 CFGCQDCYPLAFGVPAILMILALIVFMAGSKM  184 (654)
T ss_pred             ccccCcchHHHHHHHHHHHHHHHHHHHHhccc
Confidence              001369999999999988888776655443

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=98.05  E-value=2.5e-05  Score=66.85  Aligned_cols=107  Identities=15%  Similarity=0.147  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcc
Q psy14136        107 AILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHW  186 (534)
Q Consensus       107 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~  186 (534)
                      .-.++......+..++.+.+.+++|.|+.+++|.+.+.+-.+.  +. .++.+.++.+-++.|++.+..+.+...++.+.
T Consensus        41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~--~~-~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~  117 (156)
T PF05978_consen   41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS--FF-YPNSYTLYPASALLGFGAALLWTAQGTYLTSY  117 (156)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH--HH-hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence            3345566666777788889999999999999999999876554  32 25788999999999999999999999999999


Q ss_pred             cCCCcchhhhh-hhhhhhhHHHhhhhHHHHh
Q psy14136        187 IPSNERSRFMS-SFQGFSFGIGLTYPLCGFL  216 (534)
Q Consensus       187 ~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l  216 (534)
                      .++++|++-.+ .+.....+.++|.++.-.+
T Consensus       118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999 5577777877777665444

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=97.97  E-value=0.00076  Score=65.08  Aligned_cols=148  Identities=14%  Similarity=0.022  Sum_probs=95.4

Q ss_pred             hhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q psy14136        317 ILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFV  396 (534)
Q Consensus       317 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (534)
                      .+|++..+++.++....+...+...+.|.+.||+|||+.-          ++..++.++..+.-. .+ +...+++.=++
T Consensus        63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c----------l~~cily~~scl~k~-~~-~~~~L~~GRvl  130 (354)
T PF05631_consen   63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC----------LLFCILYSLSCLTKH-SS-NYPVLLLGRVL  130 (354)
T ss_pred             HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH----------HHHHHHHHHHHHHHh-cc-ccHHHHHHHHH
Confidence            4899999999999999999999999999999999998752          333334444443322 22 66677777777


Q ss_pred             HHHHhhhcccccchhhh-c----cCCCc-hhHHHHHHhHH-HHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHH
Q psy14136        397 AVTLITASYAGAMANVV-D----IGPNF-AGPILAFAQTI-HMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSC  469 (534)
Q Consensus       397 ~~~~~~~~~~~~~~~~~-~----~~p~~-~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~  469 (534)
                      .+......+...-++.. |    -+|++ .+...+..... ..+-++++..+.-.+.+.  .+ .+...+|.....+.++
T Consensus       131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~--~~-~g~vaPF~~a~~~l~~  207 (354)
T PF05631_consen  131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW--FG-FGPVAPFDAAIVLLAV  207 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH--hC-CCCcchHHHHHHHHHH
Confidence            77777776666655443 2    24544 66666655533 333444555555555555  11 2346678888777777


Q ss_pred             HHHHHHhhcC
Q psy14136        470 TYFFYQVLGT  479 (534)
Q Consensus       470 ~~~~~~~~~~  479 (534)
                      +.++.....+
T Consensus       208 ~~~~I~~~W~  217 (354)
T PF05631_consen  208 AAVLILKTWP  217 (354)
T ss_pred             HHHHHHhccc
Confidence            7666554433

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=97.96  E-value=0.00024  Score=69.65  Aligned_cols=145  Identities=19%  Similarity=0.147  Sum_probs=116.4

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhc-ccCCeehhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQ-RFGTKTVFGFSQLVTAICSLLIPQA-AVLHYGALIALRSIQGIAS  172 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grr~~l~~~~~~~~i~~~l~~~a-~~~~~~~l~~~r~l~G~g~  172 (534)
                      .+-||++..|...+......|..++-...|++.. |.++|+.-.+++.+.+++..+..++ ...+.+.+...-++.|++.
T Consensus       236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~  315 (403)
T PF03209_consen  236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN  315 (403)
T ss_pred             hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence            6689999999999999999999999999998888 6788888888888888877665444 2236788999999999999


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh----------cCCchhhhhhchhhHHHHHH
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH----------YGWRSVFYTTGSLGAIWCVA  239 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~----------~gwr~~f~i~~~~~li~~i~  239 (534)
                      |.+.....+.+.+...+++.|..+|.+ ....++..++..+++.+.+.          .+|-.+|.+.+++.++++.+
T Consensus       316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l  393 (403)
T PF03209_consen  316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL  393 (403)
T ss_pred             hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999965 66677777777777776543          23556676666655554443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=97.94  E-value=0.0011  Score=66.33  Aligned_cols=272  Identities=13%  Similarity=0.085  Sum_probs=127.9

Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh-----hcCCc------------hhhhhhchh
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA-----HYGWR------------SVFYTTGSL  232 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~-----~~gwr------------~~f~i~~~~  232 (534)
                      -.+.-..+.-.+.-....+++++.+...+ .+.+.|..++..+--.+-+     .+ +|            .-..+.|.+
T Consensus       131 l~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky-~r~~p~~~glvtl~~yl~fwg~~  209 (544)
T PF13000_consen  131 LCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKY-LRSTPSDEGLVTLSGYLKFWGWV  209 (544)
T ss_pred             HHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHh-cccCCCCCCeeeHHHHHHHHHHH
Confidence            33444455555555566777777776654 4566666665443322221     11 11            112333455


Q ss_pred             hHHHHHHhhhhccCCCCCCcccchh-----h--hhhhhhccCccc----cCCCCCccc---HHHhhcCHHHHHHHHHHHH
Q psy14136        233 GAIWCVAWWFLAFDAPLKHPRITRK-----E--LDYIQENIEPTI----VGSKGLKVP---WVSILTSPPAWAIGITTFG  298 (534)
Q Consensus       233 ~li~~i~~~~~~~~~p~~~~~~~~~-----~--~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  298 (534)
                      .++..+.+.++.+|.|+.....+.+     +  .+....+..+++    ++....+..   ..+++|-|.+..+.+..+.
T Consensus       210 ~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~  289 (544)
T PF13000_consen  210 FLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLT  289 (544)
T ss_pred             HHHHHHHHheEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence            5555556666667765432111100     0  000000000000    000011122   2445677888777777777


Q ss_pred             HHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcc-c-------ch------------
Q psy14136        299 RIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNI-M-------SL------------  358 (534)
Q Consensus       299 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~-l-------~~------------  358 (534)
                      .-.++..--.....=+.+ .|++.++.+.+.    +..++..++.|+++.|+.+.+. +       ..            
T Consensus       290 ~KigF~a~da~T~LKLlE-kG~~KE~LAl~~----li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~  364 (544)
T PF13000_consen  290 AKIGFQANDAVTSLKLLE-KGLSKEDLALLV----LIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLV  364 (544)
T ss_pred             HHhccccchhhhHHHHHH-cCCCHHHhHHHH----HHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhh
Confidence            776666555555555666 799988876554    5566666666666666643222 1       00            


Q ss_pred             ---hHHHHHHHHH-HHHHHHH-HHHHHhhcC--Cc--hhHHH---HHHHHHHHHhhhcccccchhhhccC-CCchhHHHH
Q psy14136        359 ---TNIRKVFTAI-SQVIPAL-LVMLIGYLG--CN--VALVL---ITWFVAVTLITASYAGAMANVVDIG-PNFAGPILA  425 (534)
Q Consensus       359 ---~~~~~~~~~~-~~~~~~~-~~~~~~~~~--~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~g~~~g  425 (534)
                         +..+.|.-.. +=++.++ ...+....+  ..  .+...   ...++..+....-+....+.-+.+. |.--|+.|.
T Consensus       365 g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMT  444 (544)
T PF13000_consen  365 GDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMT  444 (544)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHH
Confidence               0011111111 1111111 111111111  11  11111   1112222222233333344444554 555999999


Q ss_pred             HHhHHHHhhhhHHhHhhhhcccc
Q psy14136        426 FAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       426 ~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      +.|++.++|+..-..+.=++.|.
T Consensus       445 LLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  445 LLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             HHHHHHhcCCCchHHHHHHHhhh
Confidence            99999999998766666556554

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=97.93  E-value=0.016  Score=59.63  Aligned_cols=248  Identities=11%  Similarity=0.052  Sum_probs=140.8

Q ss_pred             ChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-----------------------
Q psy14136        101 DTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL-----------------------  156 (534)
Q Consensus       101 s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~-----------------------  156 (534)
                      +++.+..+=....+ ...+......++++|++|++++-+.+..+.....+.++..-|                       
T Consensus        56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~  135 (491)
T PF03219_consen   56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK  135 (491)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence            45666666664444 344556778999999999999887777766666655443111                       


Q ss_pred             ------HHHHHHHHHHHHhhhhcchhh-hHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhh---------h
Q psy14136        157 ------HYGALIALRSIQGIASGLTWP-AMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIA---------H  219 (534)
Q Consensus       157 ------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~---------~  219 (534)
                            +.|.+.+.-+..-+-.....+ .-..+..|.++.+|-.|..+ +..+.++|.++++.+..++.+         .
T Consensus       136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~  215 (491)
T PF03219_consen  136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV  215 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence                  112222333333333333333 46788999999999999999 557899999999988888877         1


Q ss_pred             cCCchhhhh----hchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHH
Q psy14136        220 YGWRSVFYT----TGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGIT  295 (534)
Q Consensus       220 ~gwr~~f~i----~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (534)
                      ..|...+..    ..+.+++...+. ..+.+...+.+...+++.+      +++++.+.....+.+.++++|.+..+++.
T Consensus       216 ~~~~~~l~~l~~~v~~~g~~i~~~~-~~~~~~vl~~~~~~~~~~~------~kk~k~k~s~~es~k~l~kS~yL~~Ia~l  288 (491)
T PF03219_consen  216 DAWELSLNSLMGIVLILGIVIILLY-RYMNKNVLTDPRFYPSAKK------KKKKKPKMSLKESFKLLLKSKYLLCIALL  288 (491)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHccCccccchhhhc------ccccCCCccHHHHHHHHHhCHHHHHHHHH
Confidence            235433321    112222222222 2222211111111000000      00111112233456778899999888888


Q ss_pred             HHHHHHHHHHHHhchhhhhHhhhCCcccc---chhHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136        296 TFGRIWVHYIFIIPGPRYMKTILGFSIQT---NGLLTGAPFLCSYLSSVLFCYLADQLFVRNI  355 (534)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~  355 (534)
                      ..+++.....+....-..+++.+.-+...   .|-.....++..++..++++.+.+|+|-+..
T Consensus       289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~  351 (491)
T PF03219_consen  289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTA  351 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            88887777766554445555533322221   2334455566666666777888888776644

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG2816|consensus

Probab=97.84  E-value=0.0006  Score=69.56  Aligned_cols=128  Identities=20%  Similarity=0.280  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchh
Q psy14136        332 PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMAN  411 (534)
Q Consensus       332 ~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (534)
                      .++..++.+.+.|.++||+|||..+.       ....+.++....+....      ++.++ ..-..++.+.......++
T Consensus        71 ~~~~~~i~s~~iG~lSD~~grk~~L~-------~~~~~~~l~~~~~~~~~------~~~~~-~~~l~g~~~~~~s~~~a~  136 (463)
T KOG2816|consen   71 AGLLTLISSPLIGALSDRYGRKVVLL-------LPLFGTILPALCLLFQG------YWFFL-LLGLSGGFSAIFSVGFAY  136 (463)
T ss_pred             hHHHHHHHHhhhHHhhhhhhhhhhHH-------HHHHHHHHhHHHHHHHH------HHHhh-hcccccchhhhhhhhhhh
Confidence            36788899999999999999997642       11222233322222221      22222 223334455667777888


Q ss_pred             hhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        412 VVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      +.+...++ |....|+.+.....+..++|.+.+.+...     .++..+|.+..+..++..+..+...
T Consensus       137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~-----~~~a~~f~ia~~~~~~~~~y~~~~l  199 (463)
T KOG2816|consen  137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF-----LGIALVFLIAAASGILSLLYMLLFL  199 (463)
T ss_pred             eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-----cCchHHHHHHHHHHHHHHHHHhhcc
Confidence            88887755 99999999999999999999999999998     8899999998888887776655543

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=97.80  E-value=0.032  Score=56.08  Aligned_cols=246  Identities=11%  Similarity=-0.026  Sum_probs=140.1

Q ss_pred             ChhhHHHHHHHHHH-HHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH-------H----------H----
Q psy14136        101 DTTTQGAILSSFYW-CYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL-------H----------Y----  158 (534)
Q Consensus       101 s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~-------~----------~----  158 (534)
                      +++.+.++-+..-+ +..+..++.+++.+++.|++++-+-+..+....+++++...|       +          .    
T Consensus        59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l  138 (509)
T COG3202          59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL  138 (509)
T ss_pred             cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence            46677888888888 677888999999999999999988888888888887664321       1          0    


Q ss_pred             ---------HHHHHHHHHHhhhhcchhh-hHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhc-C-----
Q psy14136        159 ---------GALIALRSIQGIASGLTWP-AMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHY-G-----  221 (534)
Q Consensus       159 ---------~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~-g-----  221 (534)
                               |...+.-+..-+-.+.... .-.....|.+..+|-.|..+ +..+.+++..++..+..++.++. .     
T Consensus       139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~  218 (509)
T COG3202         139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEF  218 (509)
T ss_pred             eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHH
Confidence                     2222222223333233333 55667888888889899999 44788888888888887777631 1     


Q ss_pred             ----CchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHH
Q psy14136        222 ----WRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTF  297 (534)
Q Consensus       222 ----wr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (534)
                          -+..+.+.++.++++..+..+.-+...+++....+..++      ++.+..+.....+.+.+.++|.++.+.+...
T Consensus       219 ~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~k------k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl  292 (509)
T COG3202         219 KDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKK------KKKKKLKLGLIESFKMILRSKYLGAIALLVL  292 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcc------cccccccCcHHHHHHHHHhhhHHHHHHHHHH
Confidence                233444444444444444333322222222111000000      0000011222335677888899988888888


Q ss_pred             HHHHHHHHHHhchhhhhHhhhCCccccchh---HhhhHHHH-HHHHHHHHHHHHHHHhh
Q psy14136        298 GRIWVHYIFIIPGPRYMKTILGFSIQTNGL---LTGAPFLC-SYLSSVLFCYLADQLFV  352 (534)
Q Consensus       298 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~---~~~~~~~~-~~~~~~~~g~l~dr~~~  352 (534)
                      +++.+...+-..--.-.++.+.......++   +....++. .++...+++.+.+|.|-
T Consensus       293 ~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW  351 (509)
T COG3202         293 AYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGW  351 (509)
T ss_pred             HHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhH
Confidence            888777766432222223223222222222   23333443 44455566666666654

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.78  E-value=0.0011  Score=65.74  Aligned_cols=163  Identities=10%  Similarity=0.021  Sum_probs=104.4

Q ss_pred             HHhchhhhhHhh-hCCccccchhHhhh-HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        306 FIIPGPRYMKTI-LGFSIQTNGLLTGA-PFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL  383 (534)
Q Consensus       306 ~~~~~~~~l~~~-~g~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (534)
                      .-.++..|+.+. .|++..+..--..+ ..-..++..+....+.|.++.|..          ++++.+...+...++.+.
T Consensus        22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv----------iil~~~~~i~t~~lll~~   91 (412)
T PF01770_consen   22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV----------IILQALSYIITWLLLLFG   91 (412)
T ss_pred             CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH----------HHHHHHHHHHHHHHHHHH
Confidence            345677788776 78887765533333 333566667777889999998865          345555545555555555


Q ss_pred             CCchhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHH
Q psy14136        384 GCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLI  462 (534)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~  462 (534)
                      + +....-+.-++.+...+. -...++++-...| ++--++.+......-+|.+++..++-.+...  .+ .+|....++
T Consensus        92 ~-sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~--~~-~sy~~L~~i  166 (412)
T PF01770_consen   92 T-SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF--GG-VSYFQLNYI  166 (412)
T ss_pred             C-cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cC-CCHHHHHHH
Confidence            4 555555555555544433 3334455544444 4566778888888777777777777666654  11 678888888


Q ss_pred             HHHHHHHHHHHHHhhcCCccc
Q psy14136        463 AGAVGSCTYFFYQVLGTSEVQ  483 (534)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~  483 (534)
                      ......++.+..+++++.++.
T Consensus       167 sl~~~~~a~~~~~fLP~~~~S  187 (412)
T PF01770_consen  167 SLASVSLALLIALFLPMPKRS  187 (412)
T ss_pred             HHHHHHHHHHHHHHcCCCCcc
Confidence            888788888888888776553

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.68  E-value=0.00015  Score=54.01  Aligned_cols=63  Identities=25%  Similarity=0.292  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Q psy14136        292 IGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNI  355 (534)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~  355 (534)
                      +-...++...+...+..++|.|+++ .|+++.++|.+.++..+..+++.++.|+++||.++++.
T Consensus         5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~   67 (77)
T PF12832_consen    5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV   67 (77)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence            4456677777888889999999998 89999999999999999999999999999999999875

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=97.66  E-value=0.0013  Score=60.42  Aligned_cols=99  Identities=14%  Similarity=0.120  Sum_probs=54.7

Q ss_pred             Ccchhhhhhh-hhhhhHHHhhhhHHHHh---hh--hcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhhhh
Q psy14136        190 NERSRFMSSF-QGFSFGIGLTYPLCGFL---IA--HYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQ  263 (534)
Q Consensus       190 ~~r~~~~~~~-~~~~~G~~~g~~l~~~l---~~--~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~~~  263 (534)
                      |+|+....+. .+.++|.++.-..--.-   .+  .-+|++.+.+.+++.++.+++..++-.+-....+. ++++++   
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~---   77 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKE---   77 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccccc---
Confidence            4566655555 47788877554332111   11  13599999999888877766655553221111111 011110   


Q ss_pred             hccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHH
Q psy14136        264 ENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGR  299 (534)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (534)
                             ......+...++.+|++..|...+.+...
T Consensus        78 -------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w  106 (267)
T PF07672_consen   78 -------NSTLSKKPSYKSILKEKETWKWILIYGIW  106 (267)
T ss_pred             -------cccccccchHHHHHccchHHHHHHHHHHH
Confidence                   01123346788999999999877665543

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.65  E-value=4.2e-05  Score=56.91  Aligned_cols=55  Identities=16%  Similarity=0.215  Sum_probs=48.1

Q ss_pred             CCCCCC-CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHH
Q psy14136         89 KPNVNE-EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVT  143 (534)
Q Consensus        89 ~P~~~~-~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~  143 (534)
                      .|-++. -++.|+|+.++|.+.++..+...++++++|.++||+++++.++....++
T Consensus        20 ~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~   75 (77)
T PF12832_consen   20 YPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM   75 (77)
T ss_pred             HhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence            466666 6679999999999999999999999999999999999999887765543

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=97.63  E-value=0.00039  Score=71.04  Aligned_cols=160  Identities=21%  Similarity=0.232  Sum_probs=107.1

Q ss_pred             hhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCC---c
Q psy14136        310 GPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGC---N  386 (534)
Q Consensus       310 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  386 (534)
                      ...|+++.+|+++.+...+.....+.- ...++.|.++|-+.-....     |++.++++.++..+....+...+.   +
T Consensus        12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~r-----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s   85 (433)
T PF03092_consen   12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYR-----RKPYMIIGWLLGAVSALVLALLPASESS   85 (433)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCc-----chHHHHHHHHHHHHHHHHHHhcccccch
Confidence            345677789999988776655544433 4567889999987421111     344566777666555554444432   3


Q ss_pred             hhHHHHHHHHHHHHhhhcccccchhhhccC---CCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136        387 VALVLITWFVAVTLITASYAGAMANVVDIG---PNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA  463 (534)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~  463 (534)
                      .....+.+++..++....-........|..   |+.+|...+.......+|+.++..+.|.+.+.     .+++..|.+.
T Consensus        86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~-----~~~~~~f~i~  160 (433)
T PF03092_consen   86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS-----FGPQGVFLIS  160 (433)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----CCCeEEehHH
Confidence            344445555555666666666666666654   33378888999999999999999999999998     6778888888


Q ss_pred             HHHHHHHHHHHHhhcCC
Q psy14136        464 GAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       464 ~~~~~~~~~~~~~~~~~  480 (534)
                      +++..+..+..+++.++
T Consensus       161 ~~~~~l~~~~~~~~~~e  177 (433)
T PF03092_consen  161 AALPLLMLIVALFLLEE  177 (433)
T ss_pred             HHHHHHHHHHHHHhhhh
Confidence            77777666665555554

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG3880|consensus

Probab=97.48  E-value=0.0036  Score=58.52  Aligned_cols=318  Identities=16%  Similarity=0.108  Sum_probs=160.2

Q ss_pred             HHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHh
Q psy14136        105 QGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVG  184 (534)
Q Consensus       105 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~  184 (534)
                      .|.+.-+-.+...+..+....+.||+---.=..+..++.+.+.++.+++  ++.++-+.+-.+..++.|.....-.++-+
T Consensus        64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs--~s~~~sL~GV~~aSissGlGEiTFL~lss  141 (409)
T KOG3880|consen   64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS--NSVPMSLLGVVFASISSGLGEITFLALSS  141 (409)
T ss_pred             cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEec--cchhHHHhhhhhhhhcCCcceeehhhhhc
Confidence            4555556666666777777788888754444455566666776774444  67888888888888888876555554443


Q ss_pred             cccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhh--cCCchhhhhhchhhHHHHHHhhhhccCCCCCCcccchhhhhh
Q psy14136        185 HWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAH--YGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDY  261 (534)
Q Consensus       185 ~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~--~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~~~~~~~~~  261 (534)
                      . +++    ...+ +.++.+.++++|..--..+.+.  ++-|...++...+.++.+...++.+++++.... ...++..+
T Consensus       142 ~-Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~-ptl~~~~~  215 (409)
T KOG3880|consen  142 R-YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYS-PTLQPSTE  215 (409)
T ss_pred             c-CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccC-CCcCccce
Confidence            3 322    2333 4456666666776555555553  456777888777777766666666655433221 11111111


Q ss_pred             hh-hccCc---cccC-CCCCcccHHHhhc-CHHHHHHHHHHHHHHHHHHHHHhchhhhhHh--hhCCcc---ccchhHhh
Q psy14136        262 IQ-ENIEP---TIVG-SKGLKVPWVSILT-SPPAWAIGITTFGRIWVHYIFIIPGPRYMKT--ILGFSI---QTNGLLTG  330 (534)
Q Consensus       262 ~~-~~~~~---~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~g~s~---~~~~~~~~  330 (534)
                      .. +....   .+.+ ........++-++ -+++...++-.+.+++..|.++.-+...+.-  ..|.+.   .|.-++..
T Consensus       216 ~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqv  295 (409)
T KOG3880|consen  216 IIPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQV  295 (409)
T ss_pred             eccCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhhe
Confidence            11 10000   0001 0111222233222 2333335555555555655554332222110  123332   23445555


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH---HHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136        331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPAL---LVMLIGYLGCNVALVLITWFVAVTLITASYAG  407 (534)
Q Consensus       331 ~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (534)
                      ...++..+.+=-.     |+-+     .+.  .+.+.+.-.+-.+   .-..+.+.+ +.+...+.++.=+...|..+..
T Consensus       296 lYQlGVFiSRSS~-----~~~~-----~p~--l~~LailQ~vNl~ff~~~a~~~ftp-si~ivf~lI~~EGLlGGasYVN  362 (409)
T KOG3880|consen  296 LYQLGVFISRSSI-----NLFT-----MPY--LWLLAILQFVNLLFFLLQAWYWFTP-SIWIVFALILFEGLLGGASYVN  362 (409)
T ss_pred             eeeeeEEEEeccc-----eEEe-----chH--HHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHhhcCchHHHH
Confidence            5555444432111     1111     010  0111111111111   112233333 5565555555555555555544


Q ss_pred             cc-hhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136        408 AM-ANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAG  443 (534)
Q Consensus       408 ~~-~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g  443 (534)
                      .+ ....|..|++|--+++.....-.+|..++..+.-
T Consensus       363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal  399 (409)
T KOG3880|consen  363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL  399 (409)
T ss_pred             HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence            44 4445677888999999988887777777766653

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=97.47  E-value=0.0082  Score=60.61  Aligned_cols=181  Identities=14%  Similarity=0.155  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +..+.+....++..+..-...+-.|.++.+.+.-+..-.+.....-.+..++.+...|.+.||..|.+..+....   ..
T Consensus         2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~---~Q   78 (432)
T PF06963_consen    2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV---VQ   78 (432)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH---HH
Confidence            345667788888888888888889999998776666556666666778888888999999999988876533221   12


Q ss_pred             HHHHHHHHHHHHHHhhcCCc----hhHHHHHH--HHHHHHhhhcccccchh------hhccC---CCchhHHHHHHhHHH
Q psy14136        367 AISQVIPALLVMLIGYLGCN----VALVLITW--FVAVTLITASYAGAMAN------VVDIG---PNFAGPILAFAQTIH  431 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~---p~~~g~~~g~~~~~~  431 (534)
                      -++..+.++.++........    .+.....+  ........-........      +..+.   |+.....++...-+=
T Consensus        79 n~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRID  158 (432)
T PF06963_consen   79 NLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRID  158 (432)
T ss_pred             HHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHH
Confidence            22223333333322222211    11111111  11111111111111111      11122   222666666666666


Q ss_pred             HhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHH
Q psy14136        432 MTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQ  475 (534)
Q Consensus       432 ~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  475 (534)
                      .+...++|.+.|.+.+.     .++.....+.++..+++..+=+
T Consensus       159 L~ckllaPl~vG~l~t~-----~s~~~~~~~i~~~N~~S~~vEy  197 (432)
T PF06963_consen  159 LFCKLLAPLFVGLLMTF-----ASPVIAAIFIAGWNLASVFVEY  197 (432)
T ss_pred             HHHHHHHHHHHHHHhhc-----cCHHHHHHHHHHHHHHHHHHHH
Confidence            67889999999999997     6788888888888877777633

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=97.37  E-value=0.013  Score=59.79  Aligned_cols=56  Identities=9%  Similarity=-0.149  Sum_probs=37.4

Q ss_pred             chhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHh
Q psy14136        386 NVALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                      +.+..++..++.++..|......+.+..+..+ ++|..+..+....-.+|-.+|..+
T Consensus       371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566666777778888777777776666544 447777776666666666666654

>KOG2563|consensus

Probab=97.28  E-value=0.0051  Score=60.89  Aligned_cols=149  Identities=11%  Similarity=0.056  Sum_probs=87.5

Q ss_pred             hhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh--c---CCc
Q psy14136        312 RYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY--L---GCN  386 (534)
Q Consensus       312 ~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~  386 (534)
                      .|..+.+| +...+-++..++.+..++..+.+-|+.||+|-|..+          .++..+..++..+=..  .   +..
T Consensus        69 n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~----------llgt~ln~iGa~Ir~iss~p~v~~~  137 (480)
T KOG2563|consen   69 NYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL----------LLGTVLNGIGAWIRLISSLPFVPPL  137 (480)
T ss_pred             HHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH----------HHHHHHHHHHHHHhhhccCcccccc
Confidence            35556677 666677888888999999999999999999998653          3444444433332111  1   122


Q ss_pred             hh--HHHHHHHHHHHHhhhcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHhhhhccccc-ccChhhHHH--HH
Q psy14136        387 VA--LVLITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMVAGYFLQDD-ETSLESWRQ--VF  460 (534)
Q Consensus       387 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~-~~~~~~~~~--~f  460 (534)
                      .+  .....-.+.....-+......-.....+| ++|+++..+..+...+|.+++.++.+.+...+ ......|..  .|
T Consensus       138 f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f  217 (480)
T KOG2563|consen  138 FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLF  217 (480)
T ss_pred             chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHH
Confidence            23  22233333322222222222223333455 55999999999999999999988888887762 111134444  34


Q ss_pred             HHHHHHHHHHH
Q psy14136        461 LIAGAVGSCTY  471 (534)
Q Consensus       461 ~~~~~~~~~~~  471 (534)
                      +...++..+.+
T Consensus       218 ~~~~~l~~l~l  228 (480)
T KOG2563|consen  218 LGVECLAALLL  228 (480)
T ss_pred             HHHHHHHHHHH
Confidence            44444444444

>KOG1479|consensus

Probab=97.27  E-value=0.0065  Score=59.83  Aligned_cols=59  Identities=2%  Similarity=-0.196  Sum_probs=35.6

Q ss_pred             chhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhh
Q psy14136        386 NVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGY  444 (534)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~  444 (534)
                      +.++.+....+.++..|-..+..+.+..+..|++...+.|....+...++.....+.++
T Consensus       342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~  400 (406)
T KOG1479|consen  342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW  400 (406)
T ss_pred             CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            55667777777788888777777777777666554444444444444444443333333

>PRK03612 spermidine synthase; Provisional

Probab=97.21  E-value=0.0054  Score=64.01  Aligned_cols=140  Identities=14%  Similarity=0.122  Sum_probs=84.9

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHH--H-HHHHHHH--HH-HHHHHHHHHHHHhh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAIC--S-LLIPQAA--VL-HYGALIALRSIQGI  170 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~--~-~l~~~a~--~~-~~~~l~~~r~l~G~  170 (534)
                      -+|-+..+.+.+.+++.+|.++|+.+++++.++.-++ ...+-+.+..++  + .+.....  .. ....++..-++.|+
T Consensus        44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~  122 (521)
T PRK03612         44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL  122 (521)
T ss_pred             HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567788899999999999999999998887432222 222221111111  1 1110111  00 11223444566788


Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhh-hhcCCchhhhhhchhhHHHHH
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLI-AHYGWRSVFYTTGSLGAIWCV  238 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~i~~~~~li~~i  238 (534)
                      ..|+..|....+..+.. .++-++..| ++....+|+++|.++.+++. ..+|-....++.+.+.+++.+
T Consensus       123 l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~  191 (521)
T PRK03612        123 LIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL  191 (521)
T ss_pred             HHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence            88888888888776543 223466677 88999999999999887765 456755444444444444443

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=97.19  E-value=5.5e-05  Score=79.03  Aligned_cols=174  Identities=11%  Similarity=0.146  Sum_probs=1.3

Q ss_pred             HHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHH
Q psy14136        301 WVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLI  380 (534)
Q Consensus       301 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  380 (534)
                      ....++..-.-.-++++++++..+.|++.+..-++.++..++..++.+|.+|.|.+          .++.++.+++.+++
T Consensus        16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi----------g~g~~~~~~g~~l~   85 (539)
T PF03137_consen   16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI----------GIGALLMGLGSLLF   85 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee----------eecHHHHHHHHHHH
Confidence            44444444344455667999999999999999999999999999999887665543          44555554444433


Q ss_pred             hhcC------------------------C---------------------c----hhHHHHHHHHHHHHhhhcccccchh
Q psy14136        381 GYLG------------------------C---------------------N----VALVLITWFVAVTLITASYAGAMAN  411 (534)
Q Consensus       381 ~~~~------------------------~---------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~  411 (534)
                      ...+                        .                     .    ....++..++.+.+....++...++
T Consensus        86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY  165 (539)
T PF03137_consen   86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY  165 (539)
T ss_dssp             ------------------------------------------------------------------SSS-----------
T ss_pred             hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence            2210                        0                     0    0122223333344444555556677


Q ss_pred             hhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhccccc----ccC-------------hhhHHHHHHHHHHHHHHHHHH
Q psy14136        412 VVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDD----ETS-------------LESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       412 ~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~----~~~-------------~~~~~~~f~~~~~~~~~~~~~  473 (534)
                      +-|..+++ .+...|+......+|-++|=.+++.+.+.+    ...             .+.|...|++.+.+.++..+.
T Consensus       166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip  245 (539)
T PF03137_consen  166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP  245 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            77766554 888888888888887777767766665321    000             123556677777777777777


Q ss_pred             HHhhcCCcccc
Q psy14136        474 YQVLGTSEVQP  484 (534)
Q Consensus       474 ~~~~~~~~~~~  484 (534)
                      ++.++|+.++.
T Consensus       246 l~~FPk~lp~~  256 (539)
T PF03137_consen  246 LFFFPKKLPGT  256 (539)
T ss_dssp             -----------
T ss_pred             HHcCCccCCCc
Confidence            78888776554

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PRK03612 spermidine synthase; Provisional

Probab=97.01  E-value=0.018  Score=60.18  Aligned_cols=143  Identities=13%  Similarity=0.085  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH---
Q psy14136        298 GRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPA---  374 (534)
Q Consensus       298 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~---  374 (534)
                      +..++...+-......+...+|.+....+.+.+.+..+..+|+.+++++.++..++...       ..+.++.+...   
T Consensus        25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-------~e~~i~l~~~~~~~   97 (521)
T PRK03612         25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-------VELLLALLGGLSAL   97 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-------HHHHHHHHHHHHHH
Confidence            33444444444444555555788888888888888888888888877765332222110       00111111111   


Q ss_pred             HHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhccc
Q psy14136        375 LLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQ  447 (534)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~  447 (534)
                      +......+............++.++..|+..|...-...+...++.|...|-......+|+++|+++.+++.-
T Consensus        98 ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl  170 (521)
T PRK03612         98 ILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLL  170 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence            1111111111011122233344456666666665555444333346677788888889999999998888765

>KOG3626|consensus

Probab=96.99  E-value=0.0091  Score=63.33  Aligned_cols=171  Identities=12%  Similarity=0.096  Sum_probs=113.3

Q ss_pred             HHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-
Q psy14136        305 IFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-  383 (534)
Q Consensus       305 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-  383 (534)
                      ++....-.-++++++++..+.|++.+..-++..+..+...+...|..|.+.+          .++.++.+++.++..+. 
T Consensus       114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~I----------g~G~~~m~lgsll~alPH  183 (735)
T KOG3626|consen  114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWI----------GIGLVLMGLGSLLFALPH  183 (735)
T ss_pred             hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcccee----------eechhHHHHHHHHHhChH
Confidence            5554455556778999999999999999999999999999999998887764          34444444444333211 


Q ss_pred             -------------------C---------------------------Cc---h-hHHHHHHHHHHHHhhhcccccchhhh
Q psy14136        384 -------------------G---------------------------CN---V-ALVLITWFVAVTLITASYAGAMANVV  413 (534)
Q Consensus       384 -------------------~---------------------------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (534)
                                         +                           .+   . .++++..++.+.+....++...+++-
T Consensus       184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiD  263 (735)
T KOG3626|consen  184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYID  263 (735)
T ss_pred             HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccc
Confidence                               0                           00   0 12223333444444455666667777


Q ss_pred             ccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccc------------cC--hhhHHHHHHHHHHHHHHHHHHHHhhc
Q psy14136        414 DIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDE------------TS--LESWRQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       414 ~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~------------~~--~~~~~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      |...++ .....|+...+..+|=++|=.+++.+...+.            +.  .+.|...|++.+.+.++..+.+++++
T Consensus       264 Dnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP  343 (735)
T KOG3626|consen  264 DNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP  343 (735)
T ss_pred             ccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            766544 8888999888888877777666666543210            00  13566778888888888888888888


Q ss_pred             CCccccC
Q psy14136        479 TSEVQPW  485 (534)
Q Consensus       479 ~~~~~~~  485 (534)
                      +..+++.
T Consensus       344 k~lp~~~  350 (735)
T KOG3626|consen  344 KELPKSQ  350 (735)
T ss_pred             ccCcccc
Confidence            8766543

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=96.85  E-value=0.069  Score=54.71  Aligned_cols=150  Identities=11%  Similarity=0.006  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCc-----cccchhHhhhHHHHHHHH-HHHHHHHHHHHhhhcccchhH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFS-----IQTNGLLTGAPFLCSYLS-SVLFCYLADQLFVRNIMSLTN  360 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s-----~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~l~~~~  360 (534)
                      |+++...+..++..+.++.+     .-++|..+.+     .+...++-+...+...+. .++.+++++|++|++.+... 
T Consensus         7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~-   80 (472)
T TIGR00769         7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTV-   80 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHH-
Confidence            45666666666666555543     3345555552     345555555554544444 78889999999999875211 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC-------------------------chhHHHHHHHHHHHHhhhccc-ccchhhhc
Q psy14136        361 IRKVFTAISQVIPALLVMLIGYLGC-------------------------NVALVLITWFVAVTLITASYA-GAMANVVD  414 (534)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  414 (534)
                          .............++....+.                         +.|...+..+..-.......+ ..+..++|
T Consensus        81 ----~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand  156 (472)
T TIGR00769        81 ----ISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ  156 (472)
T ss_pred             ----HHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                001111111111111111110                         112222333333444444444 67788899


Q ss_pred             cCCC-chhHHHHHHhHHHHhhhhHHhHhhhhcc
Q psy14136        415 IGPN-FAGPILAFAQTIHMTASFLSPMVAGYFL  446 (534)
Q Consensus       415 ~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~  446 (534)
                      +... +..+-.++.....++|..+++.+..++.
T Consensus       157 i~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~  189 (472)
T TIGR00769       157 ITTIDEAKRFYALFGLGANVALIFSGRTIKYFS  189 (472)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8864 4889999999999999999999888876

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=96.58  E-value=0.059  Score=46.23  Aligned_cols=106  Identities=7%  Similarity=-0.055  Sum_probs=77.5

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccc
Q psy14136        328 LTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG  407 (534)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (534)
                      -.++......+..++.+.+.+++|.|+.+          +++.+...+.....  ...+.+.++....+.+++.+..+..
T Consensus        42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm----------~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~a  109 (156)
T PF05978_consen   42 SLAILYGSFAISCLFAPSIVNKLGPKWSM----------ILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTA  109 (156)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhHHHH----------HHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHh
Confidence            35566677788888999999999998653          45554444333332  2226677778888888888988888


Q ss_pred             cchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhc
Q psy14136        408 AMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYF  445 (534)
Q Consensus       408 ~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l  445 (534)
                      ...++.+...++ +++-.|+.-.+...+..+|..+.-.+
T Consensus       110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  110 QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888877766 99999998888888877777665443

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG0637|consensus

Probab=96.48  E-value=0.014  Score=57.90  Aligned_cols=148  Identities=14%  Similarity=0.136  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH----hhhcccchhHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL----FVRNIMSLTNIR  362 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~l~~~~~~  362 (534)
                      +....+....+...+++..-..++|+|+++ .|.+..-.+.+....-+.+++..++.|..+||.    ||||.       
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP-------  103 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP-------  103 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccc-------
Confidence            445566666677778888888999999998 799999999888888899999999999999974    55554       


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCC----------c------hhHHHHHHHHHHHHhhhcccccchhhhccCC-CchhH-HH
Q psy14136        363 KVFTAISQVIPALLVMLIGYLGC----------N------VALVLITWFVAVTLITASYAGAMANVVDIGP-NFAGP-IL  424 (534)
Q Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~g~-~~  424 (534)
                        ++..+.....+.+.++++...          .      ....++.+-+.=+..-......-++..|+.. +++-+ +.
T Consensus       104 --fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~An  181 (498)
T KOG0637|consen  104 --FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRAN  181 (498)
T ss_pred             --hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccc
Confidence              455666666666666655421          0      0111222222223333555666677777653 44444 88


Q ss_pred             HHHhHHHHhhhhHHhHhhhh
Q psy14136        425 AFAQTIHMTASFLSPMVAGY  444 (534)
Q Consensus       425 g~~~~~~~~g~~i~~~~~g~  444 (534)
                      +....+..+|+.+|-.+.++
T Consensus       182 s~f~~f~avGnvLGY~~g~y  201 (498)
T KOG0637|consen  182 SVFSFFMAVGNVLGYALGSY  201 (498)
T ss_pred             hhHHHHHHhcceeeeecccc
Confidence            88888888999888766654

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=96.32  E-value=0.072  Score=50.88  Aligned_cols=148  Identities=26%  Similarity=0.262  Sum_probs=91.9

Q ss_pred             HhchhhhhHhhhCCcc--ccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        307 IIPGPRYMKTILGFSI--QTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG  384 (534)
Q Consensus       307 ~~~~~~~l~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (534)
                      ....+.+..+ .+.+.  ...++......+...++.++.|++.||.|||+.+          ..+............+..
T Consensus        22 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~   90 (338)
T COG0477          22 SPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL----------IIGLLLFLLGTLLLALAP   90 (338)
T ss_pred             HHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH----------HHHHHHHHHHHHHHHhCc
Confidence            3344555554 34443  3677888888888888889999999999887432          222221222223333333


Q ss_pred             C-chhHHHHHHHHHHHHhhhcccccchhhhccCCC--chhHHHHHHhH-HHHhhhhHHhHhhhhcccccccChhhHHHHH
Q psy14136        385 C-NVALVLITWFVAVTLITASYAGAMANVVDIGPN--FAGPILAFAQT-IHMTASFLSPMVAGYFLQDDETSLESWRQVF  460 (534)
Q Consensus       385 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~g~~~g~~~~-~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f  460 (534)
                      . ............+.+.+...+....+..+..|+  +++...+.... ...++..++|.+.+.+...   ...+|+..|
T Consensus        91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  167 (338)
T COG0477          91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---LLWGWRAAF  167 (338)
T ss_pred             cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHHHH
Confidence            1 244444444445566666777778888888886  58888888888 5677778888666655543   115777755


Q ss_pred             HHHHHHHH
Q psy14136        461 LIAGAVGS  468 (534)
Q Consensus       461 ~~~~~~~~  468 (534)
                      ........
T Consensus       168 ~~~~~~~~  175 (338)
T COG0477         168 LLAALLGL  175 (338)
T ss_pred             HHHHHHHH
Confidence            55554443

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=96.03  E-value=0.021  Score=42.94  Aligned_cols=74  Identities=15%  Similarity=0.151  Sum_probs=56.5

Q ss_pred             HHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHH
Q psy14136        300 IWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVML  379 (534)
Q Consensus       300 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  379 (534)
                      ..+-+.+...+|...++ .++|..+.+++.+...++.++|.+...++.++.++++.          ...+.+...+....
T Consensus         5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~----------~~~~l~~~~~~~~~   73 (85)
T PF06779_consen    5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL----------LRAGLLLTVLSTAA   73 (85)
T ss_pred             hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH----------HHHHHHHHHHHHHH
Confidence            34455666778877776 89999999999999999999999999998887555543          34666666666666


Q ss_pred             HhhcC
Q psy14136        380 IGYLG  384 (534)
Q Consensus       380 ~~~~~  384 (534)
                      +.+.+
T Consensus        74 ma~~~   78 (85)
T PF06779_consen   74 MALTH   78 (85)
T ss_pred             HHHHh
Confidence            66665

Note that many members are hypothetical proteins.

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=95.99  E-value=0.1  Score=52.07  Aligned_cols=168  Identities=12%  Similarity=0.007  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhC------C-----------------ccccchhHhhhHHHHHHHHHHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILG------F-----------------SIQTNGLLTGAPFLCSYLSSVLFCYLA  347 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~-----------------s~~~~~~~~~~~~~~~~~~~~~~g~l~  347 (534)
                      ..++...+.+..+..+..-.-..+.+..+      .                 +....+.+...-.+-.++..+.+.++.
T Consensus         4 ~fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi   83 (402)
T PF02487_consen    4 AFWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFI   83 (402)
T ss_pred             HHHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhh
Confidence            34455566666666666655555552111      0                 011123345555567777778888888


Q ss_pred             HHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHH
Q psy14136        348 DQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFA  427 (534)
Q Consensus       348 dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~  427 (534)
                      +|+..+..          ...+.++..+++++..+.+ +.+.-++..++..+..+..-.....+.. .+++.   ..+..
T Consensus        84 ~~v~y~~R----------i~~~~~l~~~g~l~va~~~-~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~~---~l~~w  148 (402)
T PF02487_consen   84 HRVPYWIR----------ILICVALSAAGMLLVAFSP-SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGKS---SLSAW  148 (402)
T ss_pred             hhccchHH----------HHHHHHHHHHHHhheeecc-chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCcc---ccccc
Confidence            88754321          2344455556666666655 6666677777777766665555555443 44442   22223


Q ss_pred             hHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        428 QTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       428 ~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ......++.+|+...-.+.+. +   .+.+..++....+.++-.+.+++.
T Consensus       149 ssGTG~aGl~Ga~~y~~lT~~-g---~s~~~tll~~~~lp~~~~~~~f~~  194 (402)
T PF02487_consen  149 SSGTGGAGLVGALYYLGLTTL-G---LSPRTTLLIMLVLPAIFLLSYFFL  194 (402)
T ss_pred             cCCcChhhHHHHHHHHHHHHh-C---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            333334555555554333332 1   456667777666655444444433

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=95.15  E-value=0.18  Score=50.55  Aligned_cols=88  Identities=13%  Similarity=-0.000  Sum_probs=71.4

Q ss_pred             hHHHHHHHHHHHHhhhcccccchhhhccCCCc----hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136        388 ALVLITWFVAVTLITASYAGAMANVVDIGPNF----AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIA  463 (534)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~  463 (534)
                      ...++.+.+...+.|..=+.......|.++++    +.+.+.+.....++|..+++.+.+++.+.     .+|...|.+.
T Consensus        34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~-----~~~~~~f~i~  108 (372)
T PF00854_consen   34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQN-----YGWFLGFGIP  108 (372)
T ss_dssp             CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC-----S-HHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccc-----cchhhhhhHH
Confidence            46677777778888888888888888765432    77888899999999999999999999988     8999999999


Q ss_pred             HHHHHHHHHHHHhhcCC
Q psy14136        464 GAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       464 ~~~~~~~~~~~~~~~~~  480 (534)
                      ++.++++.+.++.-++.
T Consensus       109 ~~~~~~~~~~f~~~~~~  125 (372)
T PF00854_consen  109 AIGMLLALIVFLSGRKR  125 (372)
T ss_dssp             HHHHHHHHHHHHCCCCT
T ss_pred             HHHHHHHHHHHHhCCcC
Confidence            99988887766654443

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG1479|consensus

Probab=94.72  E-value=2  Score=42.82  Aligned_cols=184  Identities=13%  Similarity=0.088  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136        288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA  367 (534)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~  367 (534)
                      .++..++..+........+.+-.+.|.++..+.+.  ...+.....+...+..++.-.+--|...|...+   .+-....
T Consensus        19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~---~~~~l~~   93 (406)
T KOG1479|consen   19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTR---VGYLLSL   93 (406)
T ss_pred             HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence            34555566666666777777766666555434443  344444445555555555444444444331110   0101111


Q ss_pred             HHHHHHHHHHHHHhhcCC----chhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136        368 ISQVIPALLVMLIGYLGC----NVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA  442 (534)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~  442 (534)
                      ...++..+..+.......    .....+......+++.+......+....+..++. ++...| .+..+.+.+ +.-.+.
T Consensus        94 ~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G-~a~aG~l~S-l~~i~t  171 (406)
T KOG1479|consen   94 IAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSG-QALAGTLTS-LLRILT  171 (406)
T ss_pred             HHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhc-chhHhHHHH-HHHHHH
Confidence            111111111111111111    1223333344445555566666666666666666 444333 222222222 222233


Q ss_pred             hhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCCc
Q psy14136        443 GYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTSE  481 (534)
Q Consensus       443 g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  481 (534)
                      ....+.  .. .+-..-|.+..++.+++.+++..+++.+
T Consensus       172 ka~~~~--~~-~sA~~yF~~s~~~~llC~i~y~~l~~lp  207 (406)
T KOG1479|consen  172 KAAFSD--SR-TSALIYFITSTVILLLCFVLYLVLPKLP  207 (406)
T ss_pred             HHhcCC--CC-ceeehhHHHHHHHHHHHHHHHHHhhcch
Confidence            333333  11 2333446666666677777777555543

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=94.14  E-value=1.2  Score=45.43  Aligned_cols=31  Identities=0%  Similarity=-0.071  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHHhhhcccccchhhhccCCCc
Q psy14136        389 LVLITWFVAVTLITASYAGAMANVVDIGPNF  419 (534)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  419 (534)
                      ..+...++.+++.+...+....+.....|+.
T Consensus       108 ~~~~~v~~~g~~~~~~q~s~~gla~~fp~~~  138 (437)
T TIGR00939       108 TTMASVVIINSGMALLQGSLFGLAGVFPSTY  138 (437)
T ss_pred             HHHHHHHHHHhhhhhhcccchhhcccCCHHH
Confidence            3344444555566666666666666555444

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=93.86  E-value=0.63  Score=47.29  Aligned_cols=66  Identities=8%  Similarity=-0.066  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHh-hhCCccccchhHhh---hHHHHHHHHHHHHHHHHHHHhhhccc
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKT-ILGFSIQTNGLLTG---APFLCSYLSSVLFCYLADQLFVRNIM  356 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~~~~~~l  356 (534)
                      ++.+.++++.........-+|..+++ ..+.+-.+.+.+..   ++.+=-+=+.++=....+|+||||..
T Consensus         4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSW   73 (544)
T PF13000_consen    4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSW   73 (544)
T ss_pred             HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchh
Confidence            44455555555544444567877776 13555555444322   22333333444445777889999875

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG3574|consensus

Probab=93.74  E-value=1.2  Score=43.56  Aligned_cols=183  Identities=12%  Similarity=0.077  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHH-----HHhhhcccchhHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLAD-----QLFVRNIMSLTNI  361 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~l~~~~~  361 (534)
                      +.+..+.+.+..+........ .+|.+++. .|.|-.+.+.......  -..-.++...+.|     |+||||...    
T Consensus        31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWv----  102 (510)
T KOG3574|consen   31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWV----  102 (510)
T ss_pred             hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhcccccee----
Confidence            455566666666655544444 78888885 6777766555443322  1222344455555     999998753    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCC----------chhHHHHHHHHHHHHhhhcccccchhhhc-cCCCchhHHHHHHhHH
Q psy14136        362 RKVFTAISQVIPALLVMLIGYLGC----------NVALVLITWFVAVTLITASYAGAMANVVD-IGPNFAGPILAFAQTI  430 (534)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~g~~~g~~~~~  430 (534)
                           .-+..+.+..+..+.....          +.......+++..+..+.--.....+... +.|++.|-++......
T Consensus       103 -----vp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg  177 (510)
T KOG3574|consen  103 -----VPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG  177 (510)
T ss_pred             -----eehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence                 2233333333333333211          11111112222222222222222233333 3456566666655555


Q ss_pred             HHhhhhHHhHhhhhcccc-----------cccChhhHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy14136        431 HMTASFLSPMVAGYFLQD-----------DETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEV  482 (534)
Q Consensus       431 ~~~g~~i~~~~~g~l~~~-----------~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  482 (534)
                      ...|.+++..+.-.+...           .+.+........++.+.+.+++..+..+..+++.
T Consensus       178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~  240 (510)
T KOG3574|consen  178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND  240 (510)
T ss_pred             HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            666666665554333221           0011123344455566666666655555554433

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=93.18  E-value=0.022  Score=55.47  Aligned_cols=113  Identities=12%  Similarity=-0.065  Sum_probs=2.7

Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHH-hhhcccchhHHHHHHHHHHHHHHHHH-H--HHHhhcCCchhHHHHHHHHHHHHhh
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQL-FVRNIMSLTNIRKVFTAISQVIPALL-V--MLIGYLGCNVALVLITWFVAVTLIT  402 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  402 (534)
                      .+...+.++..+|+.+.++..-+. .+|.+......|..+. ..++++-.- -  ..-.... +.++.++..++.++..|
T Consensus       186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fi-Plf~~cn~~p~~~~~~~~~~-~d~~~~i~~~l~g~TNG  263 (309)
T PF01733_consen  186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFI-PLFLLCNVQPRPRYLPVLFN-SDAWFIILMLLFGFTNG  263 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHH-HHHHHHHhhcccccCCCccc-chHHHHHHHHHHHHccc
Confidence            345678899999999888643221 2333221111221110 000000000 0  0001112 34555666667777777


Q ss_pred             hcccccchhhhccCC-CchhHHHHHHhHHHHhhhhHHhHh
Q psy14136        403 ASYAGAMANVVDIGP-NFAGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       403 ~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                      ......+.+..+..+ ++|..+-.+....-.+|-.+|..+
T Consensus       264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l  303 (309)
T PF01733_consen  264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL  303 (309)
T ss_dssp             ---HHHH---------------------------------
T ss_pred             hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            766666666666544 446666666666666666666554

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>KOG3097|consensus

Probab=92.96  E-value=0.93  Score=43.37  Aligned_cols=67  Identities=18%  Similarity=0.201  Sum_probs=50.9

Q ss_pred             hhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHHHHHhcccC
Q psy14136        119 SQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIP  188 (534)
Q Consensus       119 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~  188 (534)
                      ..++.+.+..++|-|+++.++...+...-..   -.-+.+..++-.....|++.+..+..--+++++...
T Consensus        74 s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~---Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~  140 (390)
T KOG3097|consen   74 SSMFMPLLIRFLGTKWTMVLAVFPYALYIAA---NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ  140 (390)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh---hcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence            3333448899999999999988887764332   122578889999999999999999887777776653

>KOG1237|consensus

Probab=90.80  E-value=3.9  Score=43.36  Aligned_cols=172  Identities=14%  Similarity=0.044  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHH-hhhcccchhHHHHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-FVRNIMSLTNIRKVFTAIS  369 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~  369 (534)
                      ..+..-.+...+++++...+-.|+...++.+...+.-.............+++++++|-+ ||.+..          .++
T Consensus        41 ~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI----------~~~  110 (571)
T KOG1237|consen   41 FILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI----------NIG  110 (571)
T ss_pred             HHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH----------HHH
Confidence            344444555666767777778888888888887777777777777888888999999975 554432          222


Q ss_pred             HHHHHHHHHHHh-------hcC-----------Cc-h-----hHHHHHHHHHHHHhhhcccccchhhhccCC----Cc--
Q psy14136        370 QVIPALLVMLIG-------YLG-----------CN-V-----ALVLITWFVAVTLITASYAGAMANVVDIGP----NF--  419 (534)
Q Consensus       370 ~~~~~~~~~~~~-------~~~-----------~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~--  419 (534)
                      .++..+++.++.       ..+           +. .     ..+...+.....+.+..-+.....-.|-++    +.  
T Consensus       111 s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~  190 (571)
T KOG1237|consen  111 SLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVK  190 (571)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhh
Confidence            222222221111       111           00 0     122222333333455555566666665444    22  


Q ss_pred             -hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        420 -AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       420 -~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                       ...-+.......++|..++..+.-++.+.     .+|...|.+..++.+++.++++..
T Consensus       191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~-----~~w~lgf~i~~~~~~lai~iF~~g  244 (571)
T KOG1237|consen  191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDN-----VGWKLGFGIPTVLNALAILIFLPG  244 (571)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHhhhhc-----ccceeeccHHHHHHHHHHHHHHcC
Confidence             34778888888899999999998888888     899999999888888877776654

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=89.88  E-value=3.3  Score=41.68  Aligned_cols=19  Identities=16%  Similarity=0.326  Sum_probs=12.5

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q psy14136        332 PFLCSYLSSVLFCYLADQL  350 (534)
Q Consensus       332 ~~~~~~~~~~~~g~l~dr~  350 (534)
                      ..+..++..+..|++..|.
T Consensus         4 ~~i~~i~~ii~~G~~~~~~   22 (385)
T PF03547_consen    4 SAILPIFLIILLGYLLGRF   22 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            3455666667777777765

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>KOG4830|consensus

Probab=89.44  E-value=0.32  Score=44.68  Aligned_cols=65  Identities=15%  Similarity=0.114  Sum_probs=45.8

Q ss_pred             cHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHH
Q psy14136        279 PWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLF  343 (534)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~  343 (534)
                      .|..-|++-.+....+.+.+.-.....-..|+|.|..+.+.++.+.-+++-.+..+.....+.+.
T Consensus       193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~  257 (412)
T KOG4830|consen  193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVN  257 (412)
T ss_pred             cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhc
Confidence            45556777778888888888777777778899999888777776666665555555555555443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=88.12  E-value=3.8  Score=38.15  Aligned_cols=25  Identities=20%  Similarity=-0.033  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHHHHHHhchhhhhHhh
Q psy14136        293 GITTFGRIWVHYIFIIPGPRYMKTI  317 (534)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~l~~~  317 (534)
                      .+.........++.+..=..|+++.
T Consensus       184 G~~LAv~aGvlyGs~fvPv~Yi~~~  208 (254)
T PF07857_consen  184 GIILAVFAGVLYGSNFVPVIYIQDH  208 (254)
T ss_pred             hHHHHHHHHHHHhcccchHHHHHhC
Confidence            3444445556677776666777764

The region concerned is approximately 280 residues long.

>KOG3098|consensus

Probab=87.98  E-value=10  Score=38.86  Aligned_cols=106  Identities=8%  Similarity=-0.025  Sum_probs=80.3

Q ss_pred             chhH-hhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhh
Q psy14136        325 NGLL-TGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITA  403 (534)
Q Consensus       325 ~~~~-~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (534)
                      +|+. .++......+.+++.+.+.|+++.|..          ++++........+.+.+  .+.+..+....+.|++.+.
T Consensus        51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~----------lv~ga~~y~~f~~gfl~--~N~y~~yfssallG~Gaal  118 (461)
T KOG3098|consen   51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWA----------LVIGATCYAAFPLGFLF--PNSYYLYFSSALLGFGAAL  118 (461)
T ss_pred             ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHH----------HHHHhHHHHHHHHHHHh--cchHHHHHHHHHhhhhHHh
Confidence            4444 677778888999999999999999854          35555555444444433  3677888888888999999


Q ss_pred             cccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhh
Q psy14136        404 SYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVA  442 (534)
Q Consensus       404 ~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~  442 (534)
                      .+.....+..+...++ ..+..++.-.+...+.++|..+.
T Consensus       119 lw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l  158 (461)
T KOG3098|consen  119 LWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIIL  158 (461)
T ss_pred             eecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence            9999999999988766 88888888888877777765544

>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]

Probab=85.63  E-value=8.2  Score=37.45  Aligned_cols=114  Identities=14%  Similarity=0.096  Sum_probs=68.6

Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHH----HHH-HHH--HHHHHHHHHHHHHHHhhhhc
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICS----LLI-PQA--AVLHYGALIALRSIQGIASG  173 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~----~l~-~~a--~~~~~~~l~~~r~l~G~g~g  173 (534)
                      +-.|.+.+.+.|.....+|+...-++.|.--.-+.+..-+++..++.    ++. .|+  ..++-+.+.+..++.|.-.|
T Consensus        41 ~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG  120 (508)
T COG4262          41 GILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVG  120 (508)
T ss_pred             ceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHh
Confidence            45678899999999999999888777775433322222222222221    111 122  22356778889999999999


Q ss_pred             chhhhHHHHHhc-ccCCCcchhhhhhhhhhhhHHHhhhhHHHHh
Q psy14136        174 LTWPAMYALVGH-WIPSNERSRFMSSFQGFSFGIGLTYPLCGFL  216 (534)
Q Consensus       174 ~~~~~~~~~i~~-~~~~~~r~~~~~~~~~~~~G~~~g~~l~~~l  216 (534)
                      ...|..+.++.. ....+.-+..  +...-.+|.+.+.++-.++
T Consensus       121 ~EiPL~mrml~~r~a~~k~~~s~--vl~~DYLGal~~gLl~p~l  162 (508)
T COG4262         121 AEIPLLMRMLQRRQAKAKDLGSR--VLTLDYLGALAGGLLWPFL  162 (508)
T ss_pred             cchHHHHHHHHHHHHHHHhhhhh--hhhhHhhhhhhHHHHHHHH
Confidence            999999999987 2222221111  2233456666555554443

>KOG2601|consensus

Probab=85.51  E-value=2.9  Score=40.94  Aligned_cols=123  Identities=8%  Similarity=0.020  Sum_probs=65.6

Q ss_pred             HHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-----HHHHH-----HHHHHHHHHHHHhhhhc----chhhh
Q psy14136        113 YWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-----QAAVL-----HYGALIALRSIQGIASG----LTWPA  178 (534)
Q Consensus       113 ~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-----~a~~~-----~~~~l~~~r~l~G~g~g----~~~~~  178 (534)
                      .....+..++.|...|+..|+|++...+.+--++.++++     ....+     +++.+..+-++.-.-.+    .....
T Consensus        73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~  152 (503)
T KOG2601|consen   73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAG  152 (503)
T ss_pred             HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhh
Confidence            344556777889999999999999887765333322221     11111     34444444433322211    11111


Q ss_pred             HHHHHhccc----CCCcchhhh---h-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHH
Q psy14136        179 MYALVGHWI----PSNERSRFM---S-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAI  235 (534)
Q Consensus       179 ~~~~i~~~~----~~~~r~~~~---~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li  235 (534)
                      ...+-.||.    ..+.+....   + +-..-..-.++.|.+.|.+.+..+-|..-.+.++-.++
T Consensus       153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v  217 (503)
T KOG2601|consen  153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV  217 (503)
T ss_pred             eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence            122223443    223333333   3 22334455678899999999888888765555555555

>KOG4332|consensus

Probab=83.07  E-value=2.3  Score=39.62  Aligned_cols=145  Identities=13%  Similarity=0.043  Sum_probs=75.7

Q ss_pred             hhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH-HHHHHHHHhhcCCchhHHH
Q psy14136        313 YMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI-PALLVMLIGYLGCNVALVL  391 (534)
Q Consensus       313 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  391 (534)
                      |+.+.+|+...++|.++.......++...+.|-+.||.|||+.-           +.+.+ ..++.  +.-..+....++
T Consensus        62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac-----------vtycitYiLsC--iTKhSpqYkVLm  128 (454)
T KOG4332|consen   62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC-----------VTYCITYILSC--ITKHSPQYKVLM  128 (454)
T ss_pred             eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce-----------eeehHHHHHHH--HhhcCCceEEEe
Confidence            44455888888998888776677777788889999999999853           11111 11111  111122344455


Q ss_pred             HHHHHHHHHhhhcccccchhh-hcc-----CCCc-hhHHHHHHhHH-HHhhhhHHhHhhhhcccccccChhhHHHHHHHH
Q psy14136        392 ITWFVAVTLITASYAGAMANV-VDI-----GPNF-AGPILAFAQTI-HMTASFLSPMVAGYFLQDDETSLESWRQVFLIA  463 (534)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~-~~~-----~p~~-~g~~~g~~~~~-~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~  463 (534)
                      +.-.+++......++..-++. .|-     +|++ ....++-..+. ..+-++++...+..+.|..  + .|.-.+|-..
T Consensus       129 VGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~--s-lGPVAPFdAA  205 (454)
T KOG4332|consen  129 VGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF--S-LGPVAPFDAA  205 (454)
T ss_pred             ehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh--c-cCCCCchHHH
Confidence            555556655555555544433 232     3333 33333333222 2334455555555555651  1 2344455554


Q ss_pred             HHHHHHHHHH
Q psy14136        464 GAVGSCTYFF  473 (534)
Q Consensus       464 ~~~~~~~~~~  473 (534)
                      +.+..++..+
T Consensus       206 acfLaigmAv  215 (454)
T KOG4332|consen  206 ACFLAIGMAV  215 (454)
T ss_pred             HHHHHHHHHH
Confidence            4444444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	534
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	3e-51
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	9e-05
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	4e-10
2cfq_A	417	Lactose permease; transport, transport mechanism,	8e-08
2cfq_A	417	Lactose permease; transport, transport mechanism,	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score =  180 bits (458), Expect = 3e-51
 Identities = 68/390 (17%), Positives = 129/390 (33%), Gaps = 20/390 (5%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI--PQAA 154
           E  +     G  LS     Y  S+ + G ++ R   +       ++ A   L +     A
Sbjct: 56  EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA 115

Query: 155 VLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQ-GFSFGIGLTYPLC 213
                 +  L  + G   G+ WP     + HW    ER   +S +    + G G+   L 
Sbjct: 116 TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF 175

Query: 214 GFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDAP--LKHPRITRKELDYIQENIEPTI 270
              +A    W +  Y       +  +  + +  D P     P I   + DY  +  E   
Sbjct: 176 LLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAE 235

Query: 271 VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330
                 ++    +L +   W I I       + Y  +   P Y+K +  F++  +     
Sbjct: 236 QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYF 295

Query: 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALV 390
                    ++L  +++D++F  N    T +  +      V  A +V  +   G N  + 
Sbjct: 296 LYEYAGIPGTLLCGWMSDKVFRGN-RGATGVFFMTL----VTIATIVYWMNPAG-NPTVD 349

Query: 391 LITWFVAVTLITASYAGAMANVVDIGP-NFAGPILAFAQTI-HMTASFLSPMVAGYFLQD 448
           +I   V   LI         + +++ P   AG    F     ++  S  +  + GY +  
Sbjct: 350 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD- 408

Query: 449 DETSLESWRQVFL-IAGAVGSCTYFFYQVL 477
                  W   F+ + G           V+
Sbjct: 409 ----FFGWDGGFMVMIGGSILAVILLIVVM 434

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 43.9 bits (104), Expect = 9e-05
 Identities = 15/169 (8%), Positives = 41/169 (24%), Gaps = 8/169 (4%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRF---GTKTVFGFSQLVTAICSLLIPQA 153
              +           + +  I   ++ G ++ +           F   +  I +++    
Sbjct: 282 VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMN 341

Query: 154 AVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFS---FGIGLTY 210
              +    +    + G         +        P        + F G      G     
Sbjct: 342 PAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAG-TAAGFTGLFGYLGGSVAAS 400

Query: 211 PLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKEL 259
            + G+ +  +GW   F        +  +    +      +      +EL
Sbjct: 401 AIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI-GEKRRHEQLLQEL 448

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375

 Score = 60.7 bits (148), Expect = 4e-10
 Identities = 52/346 (15%), Positives = 106/346 (30%), Gaps = 30/346 (8%)

Query: 109 LSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQ 168
           + ++   Y +SQ+  G ++ R G + V      +  + +L+           LIA  ++Q
Sbjct: 41  MGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVA--VTTSSLTVLIAASAMQ 98

Query: 169 GIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIGLTYPLCG-FLIAHYGWRSVFY 227
           G+ +G+       L        +     S          L  PL G  L   + WR+ + 
Sbjct: 99  GMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYL 158

Query: 228 TTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSP 287
               L A      + +A   P   P    +            ++ S      + ++  + 
Sbjct: 159 FLLVLCA---GVTFSMARWMPETRPVDAPR----------TRLLTS------YKTLFGNS 199

Query: 288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLA 347
                 +   G +     F       M  +LG S  T  +L   P        +   +  
Sbjct: 200 GFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILP--------IPAAFFG 251

Query: 348 DQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAG 407
                R     + +         +   L+ +   +   NV  +L+   +        +  
Sbjct: 252 AWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPL 311

Query: 408 AMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSL 453
           A +  ++  P  AG   A    +    S +   ++    Q  + SL
Sbjct: 312 ATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSL 357

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 53.8 bits (129), Expect = 8e-08
 Identities = 14/146 (9%), Positives = 41/146 (28%), Gaps = 5/146 (3%)

Query: 117 ILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW 176
                   ++  R G K     +  + ++  +    +       ++ L+++         
Sbjct: 273 ASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGS--SFATSALEVVILKTLHMFEVPFLL 330

Query: 177 PAMYALVGHWIPSNERSRFMSSFQGFSFGIG--LTYPLCGFLIAHYGWRSVFYTTGSLGA 234
              +  +         +        F   +       L G +    G++  +   G +  
Sbjct: 331 VGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVAL 390

Query: 235 I-WCVAWWFLAFDAPLKHPRITRKEL 259
               ++ + L+   PL   R    E+
Sbjct: 391 GFTLISVFTLSGPGPLSLLRRQVNEV 416

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 52/379 (13%), Positives = 106/379 (27%), Gaps = 40/379 (10%)

Query: 106 GAILSSFYWCYILSQVVGGVLTQRFGT-KTVFGFSQLVTAICSLLIP-QAAVLHYGALIA 163
           G I ++     +L Q + G+L+ + G  K +      +  + +         L    ++ 
Sbjct: 46  GIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILV 105

Query: 164 LRSIQGIASGLTWPAMYALVGHWIPSNERSRF--MSSFQGF-SFGIGLTYPLCGFLIAHY 220
              + GI  G  + A    V  +I    R         + F   G  L   + G +    
Sbjct: 106 GSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTIN 165

Query: 221 GWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPW 280
             + VF+       I  V  +F   DAP           +            S       
Sbjct: 166 N-QFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGAN-----------HSAFSLKLA 213

Query: 281 VSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSS 340
           + +   P  W + +   G    + +F      +  T    + +    + G       L +
Sbjct: 214 LELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFF-TSFFATGEQGTRVFGYVTTMGELLN 272

Query: 341 VLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTL 400
               + A  +  R               + ++ A  +M +  +G + A   +   +  TL
Sbjct: 273 ASIMFFAPLIINR-----------IGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTL 321

Query: 401 ITASYAGAMANVVD-IGPNFAGPILAFAQTIHMTASF-----LSPMVAGYFLQDDETSLE 454
                   +      I   F     A    +              ++AG   +       
Sbjct: 322 HMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYE-----SI 376

Query: 455 SWRQVFLIAGAVGSCTYFF 473
            ++  +L+ G V       
Sbjct: 377 GFQGAYLVLGLVALGFTLI 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 34/276 (12%), Positives = 75/276 (27%), Gaps = 63/276 (22%)

Query: 246 DAPLKHPR-ITRKEL-DYIQE---NIEP----TIVGSKGL-KVPWVSILTSPPAWAIGIT 295
           D  +     ++R +    +++    + P     I G  G  K    + +      +  + 
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK----TWVALDVCLSYKVQ 177

Query: 296 T---FGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLF- 351
               F   W++              L        +L     L   +    +   +D    
Sbjct: 178 CKMDFKIFWLN--------------LKNCNSPETVLEMLQKLLYQIDPN-WTSRSDHSSN 222

Query: 352 -VRNIMSLTNIRKVFTAISQVIPALLVM-------LIGY--LGCNVALVLITWFVAVTLI 401
               I S+    +           LLV+             L C +  +L T F  VT  
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI--LLTTRFKQVTDF 280

Query: 402 TASYAGAMANVVDIGPNFAGPILA--FAQTIHMTASFL-------SPMV---AGYFLQDD 449
            ++      ++           +     + +      L       +P         ++D 
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340

Query: 450 ETSLESWRQVFL--IAGAVGSCTYFFYQVLGTSEVQ 483
             + ++W+ V    +   + S       VL  +E +
Sbjct: 341 LATWDNWKHVNCDKLTTIIESS----LNVLEPAEYR 372

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	534
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	100.0
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	100.0
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	100.0
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	100.0
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	100.0
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.97
2xut_A	524	Proton/peptide symporter family protein; transport	99.96
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.51
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.45
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.45
2xut_A	524	Proton/peptide symporter family protein; transport	99.4
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.36
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.21
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.04

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=100.00  E-value=8.2e-41  Score=343.54  Aligned_cols=400  Identities=15%  Similarity=0.206  Sum_probs=320.7

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      +++|..+..++++++..++++..++..+|.+                                                 
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------   54 (451)
T 1pw4_A           24 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYL-------------------------------------------------   54 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSHHHHHHHT-------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence            3456777778889999999999999888877                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQGI  170 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G~  170 (534)
                        .+++ .++.+.|++.+++.++..++++++|+++||+|||++++++.++.+++.+++++..  +++++.++++|+++|+
T Consensus        55 --~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~  131 (451)
T 1pw4_A           55 --VEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGW  131 (451)
T ss_dssp             --TSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHH
T ss_pred             --HHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHH
Confidence              4478 9999999999999999999999999999999999999999999999999976611  3689999999999999


Q ss_pred             hhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhhcC-CchhhhhhchhhHHHHHHhhhhccCCC
Q psy14136        171 ASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAHYG-WRSVFYTTGSLGAIWCVAWWFLAFDAP  248 (534)
Q Consensus       171 g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~i~~~~~li~~i~~~~~~~~~p  248 (534)
                      +.+...+...+++.|++|+++|++++++ ..+.++|.++++.+++++.+..| ||++|++.+++.++..++.++++||+|
T Consensus       132 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~  211 (451)
T 1pw4_A          132 FQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTP  211 (451)
T ss_dssp             HHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSS
T ss_pred             HhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCH
Confidence            9999999999999999999999999994 57899999999999999888898 999999999988888777777888877


Q ss_pred             CCCcccchhhhhhhhh-ccCcccc-CCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccch
Q psy14136        249 LKHPRITRKELDYIQE-NIEPTIV-GSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNG  326 (534)
Q Consensus       249 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~  326 (534)
                      ++....++++.+...+ ....++. +....+..+++++++|.++...+..++.......+..+.|.|+++.+|++..+.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  291 (451)
T 1pw4_A          212 QSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSS  291 (451)
T ss_dssp             TTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHH
T ss_pred             hhcCCCChhhhcccccccchhhhhcccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence            6543222111110000 0000000 0111111257788999999999999999999999999999999998899999999


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHH--hhhcccchhHHHHHHHHHHHHHHH-HHHHHHhhcCC-chhHHHHHHHHHHHHhh
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQL--FVRNIMSLTNIRKVFTAISQVIPA-LLVMLIGYLGC-NVALVLITWFVAVTLIT  402 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~--~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  402 (534)
                      ++.+...++.+++.++.|++.||+  ++|+.+          .++..+.. ++++.+...+. +.+......++.+++.+
T Consensus       292 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  361 (451)
T 1pw4_A          292 WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT----------GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIY  361 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHH----------HHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCchhH----------HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999  876542          23333333 44555544432 44555555566666666


Q ss_pred             hcccccchhhhccCCCc-hhHHHHHHhHHHHh-hhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        403 ASYAGAMANVVDIGPNF-AGPILAFAQTIHMT-ASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       403 ~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~-g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      ...+....+..+..|++ ||+++|+.+...++ |..++|.+.|.+.+.     .+|...|++.+++.+++.++.+...+
T Consensus       362 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~  435 (451)
T 1pw4_A          362 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FGWDGGFMVMIGGSILAVILLIVVMI  435 (451)
T ss_dssp             HHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence            66677778888988876 99999999999999 999999999999998     78999999988888887777666543

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=100.00  E-value=7.9e-38  Score=320.13  Aligned_cols=375  Identities=12%  Similarity=0.119  Sum_probs=300.5

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      ++++..+..+++.++...++...++..+|.+                                                 
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------   52 (438)
T 3o7q_A           22 RSYIIPFALLCSLFFLWAVANNLNDILLPQF-------------------------------------------------   52 (438)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHhHHHHHHHH-------------------------------------------------
Confidence            3455666667888888999988888888877                                                 


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQ-AAVLHYGALIALRSIQGIA  171 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-a~~~~~~~l~~~r~l~G~g  171 (534)
                        ++++|+++.+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.+++.+ ..+++++.++++|++.|++
T Consensus        53 --~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~  130 (438)
T 3o7q_A           53 --QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAG  130 (438)
T ss_dssp             --HHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             --HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhh
Confidence              5589999999999999999999999999999999999999999999999999988622 3447999999999999999


Q ss_pred             hcchhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhh-hhcC-------------------------Cch
Q psy14136        172 SGLTWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLI-AHYG-------------------------WRS  224 (534)
Q Consensus       172 ~g~~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~-~~~g-------------------------wr~  224 (534)
                      .+...+...+++.|++|+++|+++++ ...+.++|.++++.+++.+. +..+                         ||+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  210 (438)
T 3o7q_A          131 LGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQT  210 (438)
T ss_dssp             HHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHH
Confidence            99999999999999999999999999 55789999999999999998 5554                         999


Q ss_pred             hhhhhchhhHHHHHHhhhh-ccCCCCCCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHH
Q psy14136        225 VFYTTGSLGAIWCVAWWFL-AFDAPLKHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVH  303 (534)
Q Consensus       225 ~f~i~~~~~li~~i~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (534)
                      .|++.+++.++..++.++. .||++++.+   ++             +++++.+.++++++++|.++...+..++.....
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (438)
T 3o7q_A          211 PYMIIVAIVLLVALLIMLTKFPALQSDNH---SD-------------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQ  274 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCCCTTTCC---CC-------------SSTTSHHHHHHHHTTCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCccccccc---cc-------------ccccchhhhHHHHHhChHHHHHHHHHHHHHHHH
Confidence            9988877766655544432 222221110   00             011223346788999999999999999998889


Q ss_pred             HHHHhchhhh-hHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        304 YIFIIPGPRY-MKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGY  382 (534)
Q Consensus       304 ~~~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (534)
                      ..+..+.|.| +++.+|.+..+++.+.+...++.+++.++.+++.||+++|+.+          .++.++..+.++++.+
T Consensus       275 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~  344 (438)
T 3o7q_A          275 TACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMALCLISAF  344 (438)
T ss_dssp             HHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHH
Confidence            9999999999 8887899999999999999999999999999999999998753          4445555555555555


Q ss_pred             cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhh-HHHHHH
Q psy14136        383 LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLES-WRQVFL  461 (534)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~-~~~~f~  461 (534)
                      .+ +... ....++.+++.+...+....+..+..|++++++.++.. ...+|+.++|.+.|.+.|.     .+ ++..|+
T Consensus       345 ~~-~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~l~~~-----~g~~~~~~~  416 (438)
T 3o7q_A          345 AG-GHVG-LIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDA-----AGNIPTAEL  416 (438)
T ss_dssp             CC-HHHH-HHHHHHHHHHHTTHHHHHHHHHHSSCGGGHHHHHHHHH-HTTHHHHHHHHHHHHHHHH-----HTSSGGGGH
T ss_pred             cC-CcHH-HHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH-HHHHHHHHHHHHHHHHHHH-----hcchHHHHH
Confidence            54 3333 33445566677777788888888888877888888877 6779999999999999998     66 888888


Q ss_pred             HHHHHHHHHHH
Q psy14136        462 IAGAVGSCTYF  472 (534)
Q Consensus       462 ~~~~~~~~~~~  472 (534)
                      +.+++.++..+
T Consensus       417 ~~~~~~~~~~~  427 (438)
T 3o7q_A          417 IPALCFAVIFI  427 (438)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            76655544433

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=100.00  E-value=1.1e-35  Score=297.90  Aligned_cols=334  Identities=14%  Similarity=0.101  Sum_probs=275.3

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      .+++|.++.+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++  ++++.+++.|++.|++.+.
T Consensus        27 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~~~  104 (375)
T 2gfp_A           27 ARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTT--SSLTVLIAASAMQGMGTGV  104 (375)
T ss_dssp             HTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999999999999999999999996655  6999999999999999999


Q ss_pred             hhhhHHHHHhcccCCCcchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        175 TWPAMYALVGHWIPSNERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ..+...+++.|++|+++|+++++ ...+..+|..+++.+++++.+..|||+.|++.+++.++..+..++.+||+++++++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (375)
T 2gfp_A          105 GGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAP  184 (375)
T ss_dssp             HHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCSTTTCC
T ss_pred             hhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCCCCcc
Confidence            99999999999999999999999 55789999999999999999989999999999888887776566666765433211


Q ss_pred             cchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHH
Q psy14136        254 ITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPF  333 (534)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~  333 (534)
                      .                   ++.+.++++++|+|+++...+..++.......+..+.|.|+++.+|.++.+.+.+.....
T Consensus       185 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~  245 (375)
T 2gfp_A          185 R-------------------TRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPI  245 (375)
T ss_dssp             C-------------------CCTTTCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHH
T ss_pred             c-------------------ccHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            0                   112335677889999999999999999999999999999999988999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH---HHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhcccccc
Q psy14136        334 LCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVI---PALLVMLIGYL-GCNVALVLITWFVAVTLITASYAGAM  409 (534)
Q Consensus       334 ~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (534)
                      ++.+++.++.+++.||.+++.            ..+..+   .+..+...... ..+.+......++.+++.+...+...
T Consensus       246 ~~~~~~~~~~~~l~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~  313 (375)
T 2gfp_A          246 PAAFFGAWFAGRPNKRFSTLM------------WQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLAT  313 (375)
T ss_dssp             HHHHHHHHHHHTTTTHHHHHH------------HHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHH
Confidence            999999999999999998731            122111   11111111111 11344445556666777788888888


Q ss_pred             hhhhccCCCchhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHH
Q psy14136        410 ANVVDIGPNFAGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAV  466 (534)
Q Consensus       410 ~~~~~~~p~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~  466 (534)
                      ....|..|++||++.|+.+....+|..++|.+.|.+.+.     .++...+++.+..
T Consensus       314 ~~~~~~~p~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~~~~~~~~~~~~~  365 (375)
T 2gfp_A          314 SGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQT-----GQGSLGLLMTLMG  365 (375)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHHCCSTTCTHHHHH-----HHHHHHHHHHHHH
T ss_pred             HHHHHhCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcccHHHHHHHHH
Confidence            999998896699999999999999999999999999887     7887777765433

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=100.00  E-value=4.3e-35  Score=304.46  Aligned_cols=425  Identities=15%  Similarity=0.119  Sum_probs=280.8

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCCC
Q psy14136         13 PARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPNV   92 (534)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~   92 (534)
                      ++-|.+.++..++.++..+|...++.++|.+.++...                                           
T Consensus         8 ~y~~~i~~~a~lg~~~~Gyd~~~i~~~~~~~~~~~~~-------------------------------------------   44 (491)
T 4gc0_A            8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVA-------------------------------------------   44 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGGTHHHHHHHHTG-------------------------------------------
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Confidence            3445555556778889999999999888777432100                                           


Q ss_pred             CCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHH----------------HHH
Q psy14136         93 NEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQA----------------AVL  156 (534)
Q Consensus        93 ~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a----------------~~~  156 (534)
                      +...+.+.+..+.|++.+++.+|.++|++++|+++||+|||++++++.+++.+++++++++                .++
T Consensus        45 ~~~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~  124 (491)
T 4gc0_A           45 PQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAG  124 (491)
T ss_dssp             GGCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGG
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhh
Confidence            0011234566788999999999999999999999999999999999999999999998742                247


Q ss_pred             HHHHHHHHHHHHhhhhcchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhhh--------cCCchhhh
Q psy14136        157 HYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIAH--------YGWRSVFY  227 (534)
Q Consensus       157 ~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~~--------~gwr~~f~  227 (534)
                      +++.++++|+++|++.|...+....+++|+.|+++|++..++. .+..+|.++++.++..+...        .+||+.+.
T Consensus       125 ~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (491)
T 4gc0_A          125 YVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFA  204 (491)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhh
Confidence            9999999999999999999999999999999999999999954 67888888888877666543        34777777


Q ss_pred             hhchhhHHHHHHhhhhccCCCCCCcccc-hhh-hhhhhhc---------cCc--cccCCCCCcccHHHhhcCHHHHHHHH
Q psy14136        228 TTGSLGAIWCVAWWFLAFDAPLKHPRIT-RKE-LDYIQEN---------IEP--TIVGSKGLKVPWVSILTSPPAWAIGI  294 (534)
Q Consensus       228 i~~~~~li~~i~~~~~~~~~p~~~~~~~-~~~-~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (534)
                      +..+..++.. ...++.||+|+...... .++ .+..++.         ..+  +.....++.......++.++......
T Consensus       205 ~~~~~~~~~~-~~~~~~peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (491)
T 4gc0_A          205 SECIPALLFL-MLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVM  283 (491)
T ss_dssp             TTHHHHHHHH-HHGGGSCCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHH
T ss_pred             hhhhhhhhhh-hhhhcCCCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHH
Confidence            7666655544 44556788875321111 010 0000000         000  00000111112233344444443333


Q ss_pred             H-HHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q psy14136        295 T-TFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIP  373 (534)
Q Consensus       295 ~-~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~  373 (534)
                      . .+........+..+.|.+.+. .+.+...........++..+++.++++++.||+|||+.+          ..+....
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~----------~~~~~~~  352 (491)
T 4gc0_A          284 LSIFQQFVGINVVLYYAPEVFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGM  352 (491)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHH----------HHHHHHH
T ss_pred             HHHHHHHhhhhHHHhcchHHHHh-cCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchh----------ccchHHH
Confidence            3 333444455566666666655 677777777777788899999999999999999998764          2333333


Q ss_pred             HHHHHHHh---hcCCchhHHHHHHHHHHHH-hhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccc
Q psy14136        374 ALLVMLIG---YLGCNVALVLITWFVAVTL-ITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQD  448 (534)
Q Consensus       374 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~  448 (534)
                      .++++.+.   .............++...+ .....+..+.+..|++|.+ |+++.|+.+..+++++++++.+.+.+.+.
T Consensus       353 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~  432 (491)
T 4gc0_A          353 AIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKN  432 (491)
T ss_dssp             HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHH
T ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33322222   2221223333333332222 2233456678899999987 99999999999999999999988877654


Q ss_pred             cc-cChhhHHHHHHHHHHHHHHHHHH-HHhhcCCccccCCCCCCCC
Q psy14136        449 DE-TSLESWRQVFLIAGAVGSCTYFF-YQVLGTSEVQPWNQLKPAT  492 (534)
Q Consensus       449 ~~-~~~~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  492 (534)
                      .. ....++...|++.+++++++.+. +++++|++.++.+|.++..
T Consensus       433 ~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f  478 (491)
T 4gc0_A          433 SWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALW  478 (491)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGT
T ss_pred             HHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCCCCHHHHHHHh
Confidence            00 00023344566767666666654 4567898888777655443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=100.00  E-value=6.7e-34  Score=295.52  Aligned_cols=371  Identities=13%  Similarity=0.099  Sum_probs=265.4

Q ss_pred             ccccCChhhHHHHHHHHHHHHHHhhcccchhhcc-cCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy14136         96 GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQR-FGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGL  174 (534)
Q Consensus        96 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~  174 (534)
                      +|+|++..+.|++.+++.++..++++++|+++|| +|||+++..+.++.+++.++++++  ++++.++++|+++|++.+.
T Consensus        47 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~  124 (491)
T 4aps_A           47 GDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALP--FGASALFGSIILIIIGTGF  124 (491)
T ss_dssp             TSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSC--CSTTHHHHHHHHHHHHHHH
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHh
Confidence            4699999999999999999999999999999999 899999999999999999986554  6899999999999999999


Q ss_pred             hhhhHHHHHhcccCCCc--chhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCC
Q psy14136        175 TWPAMYALVGHWIPSNE--RSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKH  251 (534)
Q Consensus       175 ~~~~~~~~i~~~~~~~~--r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~  251 (534)
                      ..+...+++.|++|+++  |+.+++ ...+.++|..++|.+++.+.+..|||+.|++.++..++..++.++..++..++.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  204 (491)
T 4aps_A          125 LKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPH  204 (491)
T ss_dssp             HHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred             ccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCccccccc
Confidence            99999999999999988  666777 447889999999999999999999999999988777766665554434322111


Q ss_pred             -----cccchhhhhhhhhc----------------cCccccC----------------------CCCCcccHHHhhcCHH
Q psy14136        252 -----PRITRKELDYIQEN----------------IEPTIVG----------------------SKGLKVPWVSILTSPP  288 (534)
Q Consensus       252 -----~~~~~~~~~~~~~~----------------~~~~~~~----------------------~~~~~~~~~~~~~~~~  288 (534)
                           ...++++.++..+.                ..+....                      .+..+....+..+...
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (491)
T 4aps_A          205 YLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVS  284 (491)
T ss_dssp             CSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------CTT
T ss_pred             ccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence                 01111111110000                0000000                      0000000011111122


Q ss_pred             HHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q psy14136        289 AWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAI  368 (534)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~  368 (534)
                      .+...+..++....+.....++|.|.++..+.+....+.+.....++.+++.++.+++.||++||+....     .....
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~-----~~~~~  359 (491)
T 4aps_A          285 YIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSP-----TKFAV  359 (491)
T ss_dssp             HHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CH-----HHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCch-----HHHHH
Confidence            4444555555566666677788889988788887888999999999999999999999999999865321     12234


Q ss_pred             HHHHHHHHHHHHhhc--------CCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHh
Q psy14136        369 SQVIPALLVMLIGYL--------GCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSP  439 (534)
Q Consensus       369 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~  439 (534)
                      +..+.++++.++...        +.+.+......++.+++.+...+....+..|..|++ ||++.|+.+....+|..++|
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~  439 (491)
T 4aps_A          360 GLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNA  439 (491)
T ss_dssp             HHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444444433331        124555666667777777777888888999999877 99999999999999999999


Q ss_pred             HhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        440 MVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       440 ~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+.+.+.+.      ++...|.+.+++.+++.++.++..+
T Consensus       440 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  473 (491)
T 4aps_A          440 QLVTLYNAK------SEVAYFSYFGLGSVVLGIVLVFLSK  473 (491)
T ss_dssp             HHGGGGGGS------STTHHHHHTHHHHHHHHHHHHHC--
T ss_pred             HHHHHHhcc------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988766      4556677777766666665555443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.97  E-value=9.8e-31  Score=265.73  Aligned_cols=355  Identities=12%  Similarity=0.095  Sum_probs=242.3

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHhhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIP-QAAVLHY-GALIALRSIQGIAS  172 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~-~a~~~~~-~~l~~~r~l~G~g~  172 (534)
                      ++++|+|+.+.|++.+.+.++..++++++|+++||+|||++++++.++++++..... ....+.. ..++..+++.|++.
T Consensus        35 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (417)
T 2cfq_A           35 HDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYL  114 (417)
T ss_dssp             HTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSST
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            447899999999999999999999999999999999999999999887765322110 1111111 12345677777766


Q ss_pred             cchhhhHHHHHhcccCC--Ccchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        173 GLTWPAMYALVGHWIPS--NERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~--~~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      +...+.....+.++.++  ++|+...+ ...+..+|..++|.+++++.+ .+||+.|++.+++.++..+..++..||+++
T Consensus       115 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  193 (417)
T 2cfq_A          115 GFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPS  193 (417)
T ss_dssp             THHHHTTHHHHHHHHHHHHHHHTCCHHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCCCCSC
T ss_pred             HHHHhhhHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            66555555555555543  35566677 446788999999999999887 589999998887766554444333333321


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCC---ccccch
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGF---SIQTNG  326 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---s~~~~~  326 (534)
                      .. +  +++.+        ++++++....++++++++|+++...+..++....+..+..+.|.|+.+.++.   +....+
T Consensus       194 ~~-~--~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  262 (417)
T 2cfq_A          194 SA-T--VANAV--------GANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFG  262 (417)
T ss_dssp             SS-C--SSSSS--------SSCCCCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHH
T ss_pred             cc-c--ccccc--------ccccccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHH
Confidence            11 0  00000        0000111223456788999998877766665556666667788888765442   234456


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccc
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYA  406 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (534)
                      ++.++..++.+++.++.+++.||++||+.+          ..+..+.++.++.+.+.+ +.+...+..++.+++.+...+
T Consensus       263 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~  331 (417)
T 2cfq_A          263 YVTTMGELLNASIMFFAPLIINRIGGKNAL----------LLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEVPFLLV  331 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCHHHHH----------HHHHHHHHHHHHHHTTCC-SHHHHHHHTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcHHHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHH
Confidence            777777888899999999999999998753          344455555555555444 444444443334444444445


Q ss_pred             ccchhhhccCCCc-hhHHHHHH-hHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        407 GAMANVVDIGPNF-AGPILAFA-QTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       407 ~~~~~~~~~~p~~-~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      ....+..|..|++ ||++.++. +....+|+.++|.+.|.+.+.     .++...|.+.+++.+++.++.+..
T Consensus       332 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~-----~g~~~~f~~~~~~~l~~~~~~~~~  399 (417)
T 2cfq_A          332 GCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYES-----IGFQGAYLVLGLVALGFTLISVFT  399 (417)
T ss_dssp             HHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHH-----SHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHh-----cCcHHHHHHHHHHHHHHHHHHHhh
Confidence            5567888988877 99999994 888899999999999999988     678889998888887777665543

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.96  E-value=2.4e-28  Score=255.74  Aligned_cols=367  Identities=11%  Similarity=0.078  Sum_probs=226.7

Q ss_pred             CChhhHHHHHHHHHHHHHHhhcccchhhccc-CCeehhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhcchhh
Q psy14136        100 WDTTTQGAILSSFYWCYILSQVVGGVLTQRF-GTKTVFGFSQLVTAICSLLIPQAAVL-HYGALIALRSIQGIASGLTWP  177 (534)
Q Consensus       100 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~~~-~~~~l~~~r~l~G~g~g~~~~  177 (534)
                      +++.+.|++.+++.++..++.+++|+++||+ |||+++.++.++.+++.++++++  + +++.+++.|++.|++.+...+
T Consensus        51 ~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~  128 (524)
T 2xut_A           51 LRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIF--EHSVQGFYTGLFLIALGSGGIKP  128 (524)
T ss_dssp             TTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHT--SSCHHHHHHHHHHHHHHHHTTHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHhccccch
Confidence            9999999999999999999999999999999 99999999999999999886544  6 899999999999999999999


Q ss_pred             hHHHHHhcccCCCcchhhhhh---h-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCCCCcc
Q psy14136        178 AMYALVGHWIPSNERSRFMSS---F-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPR  253 (534)
Q Consensus       178 ~~~~~i~~~~~~~~r~~~~~~---~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~~~~~  253 (534)
                      ...+++.|++|+++|+++.+.   + .+.++|..+++.+++.+.+..|||+.|++.+++.++..++.++..++.++++++
T Consensus       129 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (524)
T 2xut_A          129 LVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPE  208 (524)
T ss_dssp             HHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCCC--
T ss_pred             hHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Confidence            999999999999999876554   4 578899999999999999889999999998887776655544433322211111


Q ss_pred             cch--hhhhhhhhccCcccc------------------------C----------------CCCCcccHH----------
Q psy14136        254 ITR--KELDYIQENIEPTIV------------------------G----------------SKGLKVPWV----------  281 (534)
Q Consensus       254 ~~~--~~~~~~~~~~~~~~~------------------------~----------------~~~~~~~~~----------  281 (534)
                      .++  +..+...+..++.+.                        .                +++.+.+++          
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (524)
T 2xut_A          209 PKDPHGFLPVIRSALLTKVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHP  288 (524)
T ss_dssp             ------------------CTTHHHHHHHHHHHHHHHHHHTGGGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHHHSCCSCC
T ss_pred             CccchhHHHHHHHHHhhhhcccCccchhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhcccccchhhHHhhhhcccc
Confidence            000  000000000000000                        0                000000010          


Q ss_pred             --HhhcCHHHHHHHHHHHHHHHHHHH-HHhchhhhhHhhhCCcc---ccchhHhhhHHHHHHHHHHHHHHHH----HHHh
Q psy14136        282 --SILTSPPAWAIGITTFGRIWVHYI-FIIPGPRYMKTILGFSI---QTNGLLTGAPFLCSYLSSVLFCYLA----DQLF  351 (534)
Q Consensus       282 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~s~---~~~~~~~~~~~~~~~~~~~~~g~l~----dr~~  351 (534)
                        +....++.+........ ....+. ...+.+.+.....+.+.   ...+.+.....++.++...+.+++.    +|.+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (524)
T 2xut_A          289 DAAVDGVRSVLRILVLFAL-VTPFWSLFDQKASTWILQANDMVKPQWFEPAMMQALNPLLVMLLIPFNNFVLYPAIERMG  367 (524)
T ss_dssp             SSSSTTTTTHHHHHHHHTT-SHHHHTTTSSTTTHHHHHHHHSCCCSSSCHHHHHTTSGGGHHHHGGGTTTC---------
T ss_pred             HhHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhhHHhHHhcCCCeeecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcC
Confidence              00111222222111111 111111 12222223222222222   1345555555555666665555543    4433


Q ss_pred             hhcccchhHHHHHHHHHHHHHHHHHHHHHhhcC--------CchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhH
Q psy14136        352 VRNIMSLTNIRKVFTAISQVIPALLVMLIGYLG--------CNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGP  422 (534)
Q Consensus       352 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~  422 (534)
                      ++...      +....++.++.+++++.+....        .+.++.....++.+++.+...+....+..+..|++ ||+
T Consensus       368 ~~~~~------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~  441 (524)
T 2xut_A          368 VKLTA------LRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGT  441 (524)
T ss_dssp             ---CC------HHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTCCTT
T ss_pred             CCCCh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHhH
Confidence            32211      0113345555555555554421        24555666667777777788888888899988866 999


Q ss_pred             HHHHHhHHHHhhhhHHhHhhhhcccccccChhhH---------HHHHHHHHHHHHHHHHHHHhhc
Q psy14136        423 ILAFAQTIHMTASFLSPMVAGYFLQDDETSLESW---------RQVFLIAGAVGSCTYFFYQVLG  478 (534)
Q Consensus       423 ~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~---------~~~f~~~~~~~~~~~~~~~~~~  478 (534)
                      ++|+.++...+|+.++|.+.|.+.+.  .+ .+|         ...|++.+++.+++.++.+++.
T Consensus       442 ~~g~~~~~~~~g~~~g~~~~g~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (524)
T 2xut_A          442 IMSFWTLSVTVGNLWVLLANVSVKSP--TV-TEQIVQTGMSVTAFQMFFFAGFAILAAIVFALYA  503 (524)
T ss_dssp             THHHHGGGHHHHHHHHHHHHHHTTSC--HH-HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccc--cc-ccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999875  10 122         2336666666666666555443

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.51  E-value=1.6e-13  Score=139.94  Aligned_cols=173  Identities=12%  Similarity=0.144  Sum_probs=140.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFT  366 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~  366 (534)
                      +.++...+..+........+...+|.+.++ + .+..+.+++.+...++..++.++.|+++||+|||+.+          
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l----------   95 (451)
T 1pw4_A           28 QIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL----------   95 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHH----------
Confidence            445555566666666666667778888777 6 9999999999999999999999999999999998763          


Q ss_pred             HHHHHHHHHHHHHHhh----cCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHh
Q psy14136        367 AISQVIPALLVMLIGY----LGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMV  441 (534)
Q Consensus       367 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~  441 (534)
                      .++.++.+++.++..+    .+ +.+.+++..++.+++.+...+....++.|..|++ |++++|+.+....+|..++|.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~  174 (451)
T 1pw4_A           96 PAGLILAAAVMLFMGFVPWATS-SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLL  174 (451)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHS-SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhccc-cHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            5666666666666666    55 6777777788888888888888999999999855 9999999999999999999999


Q ss_pred             hhhcccccccChhh-HHHHHHHHHHHHHHHHHHHHhh
Q psy14136        442 AGYFLQDDETSLES-WRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       442 ~g~l~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      .+.+.+.     .+ |+..|++.+++.++..++.++.
T Consensus       175 ~~~l~~~-----~g~w~~~f~~~~~~~~~~~~~~~~~  206 (451)
T 1pw4_A          175 FLLGMAW-----FNDWHAALYMPAFCAILVALFAFAM  206 (451)
T ss_dssp             HHHHHHH-----TCCSTTCTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH-----hccHHHHHHHHHHHHHHHHHHHHhh
Confidence            9998877     67 9999999888777666554444

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.45  E-value=1.5e-12  Score=134.59  Aligned_cols=175  Identities=12%  Similarity=0.021  Sum_probs=147.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhh-----hCCccccchhHhhhHHHHHHHHHHHHHHHHHH-HhhhcccchhH
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTI-----LGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQ-LFVRNIMSLTN  360 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~  360 (534)
                      +.++...+..++..+.++....+++.|+++.     +|.+..+.+++.+...++..++.++.|+++|| +|||+.+    
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~----   88 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAV----   88 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHH----
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHH----
Confidence            4567777788888888899999999999988     89999999999999999999999999999999 8998763    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCC-Cc--hhHHHHHHhHHHHhhhhH
Q psy14136        361 IRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGP-NF--AGPILAFAQTIHMTASFL  437 (534)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~--~g~~~g~~~~~~~~g~~i  437 (534)
                            .++.++.+++.++..+.+ +.+..++..++.+++.+...+....++.|..| ++  |+.+.++.+....+|..+
T Consensus        89 ------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~  161 (491)
T 4aps_A           89 ------FWGGVLIMLGHIVLALPF-GASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFI  161 (491)
T ss_dssp             ------HHHHHHHHHHHHHHHSCC-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHH
Confidence                  566666666666666665 67777777788888888888888999999886 44  777888899999999999


Q ss_pred             HhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhh
Q psy14136        438 SPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVL  477 (534)
Q Consensus       438 ~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  477 (534)
                      +|.+.+.+.+.     .+|+..|++.++..+++.++.+..
T Consensus       162 ~~~~~~~l~~~-----~g~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          162 APLIVGAAQEA-----AGYHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             HHHHHHHHHHH-----SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999988     789999999888777766665544

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.45  E-value=2.1e-12  Score=131.20  Aligned_cols=177  Identities=15%  Similarity=0.139  Sum_probs=134.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q psy14136        288 PAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTA  367 (534)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~  367 (534)
                      .++.+.+..+.............|.+.+ .+|.+..+.+++.+...++..++.++.|+++||+|||+.+          .
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l----------~   95 (438)
T 3o7q_A           27 PFALLCSLFFLWAVANNLNDILLPQFQQ-AFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI----------I   95 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHH----------H
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHH----------H
Confidence            3444455555555555666666777555 4899999999999999999999999999999999999764          4


Q ss_pred             HHHHHHHHHHHHH---hhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhh
Q psy14136        368 ISQVIPALLVMLI---GYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAG  443 (534)
Q Consensus       368 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g  443 (534)
                      ++.++.+++.++.   ...+ +.+..++..++.+++.+...+....++.|..|++ |++++++.+....+|..++|.+.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~  174 (438)
T 3o7q_A           96 TGLFLYALGAALFWPAAEIM-NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ  174 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccccc-cHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555555555555   4545 7777888888888888988888999999998866 999999999999999999999999


Q ss_pred             hcc-cccccC--------------------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        444 YFL-QDDETS--------------------LESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       444 ~l~-~~~~~~--------------------~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      .+. +..+..                    ..+|+..|++.+++.++..++.++
T Consensus       175 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~  228 (438)
T 3o7q_A          175 SLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIML  228 (438)
T ss_dssp             HHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            988 541000                    001888888777766655555444

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.40  E-value=2e-12  Score=134.71  Aligned_cols=175  Identities=11%  Similarity=-0.030  Sum_probs=141.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhC------CccccchhHhhhHHHHHHHHHHHHHHHHHHH-hhhcccchh
Q psy14136        287 PPAWAIGITTFGRIWVHYIFIIPGPRYMKTILG------FSIQTNGLLTGAPFLCSYLSSVLFCYLADQL-FVRNIMSLT  359 (534)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~  359 (534)
                      |.++.+.+..++..+.++....+++.|+++.+|      ++..+.+++.+...++..++.++.|+++||+ |||+.+   
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~---   88 (524)
T 2xut_A           12 RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTI---   88 (524)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHH---
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH---
Confidence            456677777888888888889999999998889      9999999999999999999999999999999 998763   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHH---HhHHHHhhh
Q psy14136        360 NIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAF---AQTIHMTAS  435 (534)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~---~~~~~~~g~  435 (534)
                             .++.++.+++.++..+.+.+.+..++..++.+++.+...+....++.|..|++ |+++.+.   .+...++|.
T Consensus        89 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~  161 (524)
T 2xut_A           89 -------LWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGS  161 (524)
T ss_dssp             -------HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHH
Confidence                   45555555555555555425666666777778888888888889999998866 8766555   888999999


Q ss_pred             hHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHh
Q psy14136        436 FLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQV  476 (534)
Q Consensus       436 ~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~  476 (534)
                      .++|.+.+.+.+.     .+|+..|++.+++.+++.+..+.
T Consensus       162 ~~g~~~~~~l~~~-----~g~~~~f~~~~~~~~~~~~~~~~  197 (524)
T 2xut_A          162 FFASLSMPLLLKN-----FGAAVAFGIPGVLMFVATVFFWL  197 (524)
T ss_dssp             HHHHHTSTHHHHT-----SCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999887     78999999988877766655544

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.36  E-value=3.4e-12  Score=126.90  Aligned_cols=166  Identities=12%  Similarity=0.089  Sum_probs=134.6

Q ss_pred             HHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q psy14136        291 AIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQ  370 (534)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~  370 (534)
                      .+.+..++.......+...+|.+.++ +|.+..+.+++.+...++..++.++.|+++||+|||+.+          ..+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~----------~~~~   72 (375)
T 2gfp_A            4 MLVLLVAVGQMAQTIYIPAIADMARD-LNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVI----------LVGM   72 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTT-SSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCC----------HHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH----------HHHH
Confidence            44555566666666667777777665 899999999999999999999999999999999999986          4555


Q ss_pred             HHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhcccccchhhhccCCC-chhHHHHHHhHHHHhhhhHHhHhhhhccccc
Q psy14136        371 VIPALLVMLIGYLGCNVALVLITWFVAVTLITASYAGAMANVVDIGPN-FAGPILAFAQTIHMTASFLSPMVAGYFLQDD  449 (534)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~  449 (534)
                      .+..+........+ +.+......++.+.+.+...+....++.|..|+ +|++++++.+....+|..++|.+.+.+.+. 
T Consensus        73 ~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-  150 (375)
T 2gfp_A           73 SIFMLATLVAVTTS-SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTM-  150 (375)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCH-
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh-
Confidence            55555555555554 666677777777888888888888899998875 499999999999999999999999999988 


Q ss_pred             ccChhhHHHHHHHHHHHHHHHHHH
Q psy14136        450 ETSLESWRQVFLIAGAVGSCTYFF  473 (534)
Q Consensus       450 ~~~~~~~~~~f~~~~~~~~~~~~~  473 (534)
                          .+|+..|++.+++.++..+.
T Consensus       151 ----~~~~~~~~~~~~~~~~~~~~  170 (375)
T 2gfp_A          151 ----WNWRACYLFLLVLCAGVTFS  170 (375)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHCC
T ss_pred             ----ccHHHHHHHHHHHHHHHHHH
Confidence                89999999888777666553

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.21  E-value=9.7e-12  Score=125.61  Aligned_cols=145  Identities=8%  Similarity=0.056  Sum_probs=120.3

Q ss_pred             ChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhHH
Q psy14136        101 DTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTWPAMY  180 (534)
Q Consensus       101 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~~~~~  180 (534)
                      +..+.+++.++..++..++.++.|+++||+|||+++..+.++.+++.++.++  .++.+.+++..++.+++.+...+...
T Consensus       257 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~  334 (417)
T 2cfq_A          257 GTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSF--ATSALEVVILKTLHMFEVPFLLVGCF  334 (417)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT--CCSHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556788888999999999999999999999999999888888877655433  34677777888888888777778888


Q ss_pred             HHHhcccCCCcchhhhhh-h-hhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        181 ALVGHWIPSNERSRFMSS-F-QGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       181 ~~i~~~~~~~~r~~~~~~-~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      .++.|.+|++.|+++.++ + ....+|..++|.+++++.+..|++..|.+.+++.++..++.++..||+
T Consensus       335 ~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~  403 (417)
T 2cfq_A          335 KYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGP  403 (417)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTTSSCCS
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            999999999999999885 4 567799999999999999888899999988888887777666655554

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.04  E-value=9.3e-10  Score=113.41  Aligned_cols=152  Identities=14%  Similarity=0.068  Sum_probs=112.1

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHH---HHHHH-HHHHHHHhhhh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVL---HYGAL-IALRSIQGIAS  172 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~---~~~~l-~~~r~l~G~g~  172 (534)
                      ..+.+............+...++.++.+++.||+|||+.++.+....+++.+..+.....   +...+ ...-+..+++.
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (491)
T 4gc0_A          306 TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAM  385 (491)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             hcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh
Confidence            445566677777778888889999999999999999999999998888877765444222   11222 22222233332


Q ss_pred             cchhhhHHHHHhcccCCCcchhhhhhh-hhhhhHHHhhhhHHHHhhh------hcCCchhhhhhchhhHHHHHHhhhhcc
Q psy14136        173 GLTWPAMYALVGHWIPSNERSRFMSSF-QGFSFGIGLTYPLCGFLIA------HYGWRSVFYTTGSLGAIWCVAWWFLAF  245 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~G~~~g~~l~~~l~~------~~gwr~~f~i~~~~~li~~i~~~~~~~  245 (534)
                       ...+....+.+|.+|.+.|++++++. ....+|..+++.+...+.+      ..++...|++.++++++..+..++++|
T Consensus       386 -~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~P  464 (491)
T 4gc0_A          386 -SWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP  464 (491)
T ss_dssp             -TTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             -HHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheec
Confidence             34577889999999999999999954 6677888877776655433      356788899999999999888888999


Q ss_pred             CCCC
Q psy14136        246 DAPL  249 (534)
Q Consensus       246 ~~p~  249 (534)
                      |+..
T Consensus       465 ETkg  468 (491)
T 4gc0_A          465 ETKG  468 (491)
T ss_dssp             CCTT
T ss_pred             CCCC
Confidence            8754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	534
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	1e-20
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	2e-04
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	2e-06
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	3e-06

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 92.4 bits (228), Expect = 1e-20
 Identities = 63/400 (15%), Positives = 123/400 (30%), Gaps = 17/400 (4%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLL--IPQAA 154
           E  +     G  LS     Y  S+ + G ++ R   +       ++ A   L       A
Sbjct: 53  EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA 112

Query: 155 VLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQG-FSFGIGLTYPLC 213
                 +  L  + G   G+ WP     + HW    ER   +S +    + G G+   L 
Sbjct: 113 TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF 172

Query: 214 GFLIA-HYGWRSVFYTTGSLGAIWCVAWWFLAFDAP--LKHPRITRKELDYIQENIEPTI 270
              +A    W +  Y       +  +  + +  D P     P I   + DY  +  E   
Sbjct: 173 LLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAE 232

Query: 271 VGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTG 330
                 ++    +L +   W I I       + Y  +   P Y+K +  F++  +     
Sbjct: 233 QELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYF 292

Query: 331 APFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALV 390
                    ++L  +++D++F  N  +          I     A +V  +   G     +
Sbjct: 293 LYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI-----ATIVYWMNPAGNPTVDM 347

Query: 391 LITWFVAVTLITASYAGAMANVVDIGPNFAGPILAFAQTI-HMTASFLSPMVAGYFLQDD 449
           +    +   +        +  +       AG    F     ++  S  +  + GY +   
Sbjct: 348 ICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD-- 405

Query: 450 ETSLESWRQVFLIAGAVGSCTYFFYQVLGTSEVQPWNQLK 489
                 W   F++             V+   E +   QL 
Sbjct: 406 ---FFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLL 442

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 13/169 (7%), Positives = 38/169 (22%), Gaps = 2/169 (1%)

Query: 91  NVNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLI 150
               +      ++    +         L          R        F   +  I +++ 
Sbjct: 276 LKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVY 335

Query: 151 PQAAVLHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSF--GIGL 208
                 +    +    + G         +        P             F +  G   
Sbjct: 336 WMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVA 395

Query: 209 TYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRK 257
              + G+ +  +GW   F        +  +    +      +H ++ ++
Sbjct: 396 ASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE 444

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 47.8 bits (112), Expect = 2e-06
 Identities = 38/333 (11%), Positives = 88/333 (26%), Gaps = 4/333 (1%)

Query: 97  EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLL--IPQAA 154
                 +  G I ++     +L Q + G+L+ + G +    +      +      I    
Sbjct: 37  INHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFG 96

Query: 155 VLHYGALIALRSIQGIASGLTWPAMYALVG--HWIPSNERSRFMSSFQGFSFGIGLTYPL 212
            L    ++    + GI  G  + A    V       S   +      + F          
Sbjct: 97  PLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGAS 156

Query: 213 CGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPLKHPRITRKELDYIQENIEPTIVG 272
              ++     + VF+       I  V  +F   DAP           ++   +++  +  
Sbjct: 157 IVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALEL 216

Query: 273 SKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTNGLLTGAP 332
            +  K+ ++S+     +    +           F   G +  +     +     L     
Sbjct: 217 FRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM 276

Query: 333 FLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLI 392
           F    + + +    A  L    +          T+  +V+    + +       V     
Sbjct: 277 FFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKY 336

Query: 393 TWFVAVTLITASYAGAMANVVDIGPNFAGPILA 425
                    +A+                  +LA
Sbjct: 337 ITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLA 369

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 47.5 bits (111), Expect = 3e-06
 Identities = 13/150 (8%), Positives = 39/150 (26%), Gaps = 4/150 (2%)

Query: 96  GEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV 155
              +  T   G + +              ++  R G K     +  + ++  +    A  
Sbjct: 252 ATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFAT- 310

Query: 156 LHYGALIALRSIQGIASGLTWPAMYALVGHWIPSNERSRFMSSFQGFSFGIG--LTYPLC 213
                ++ L+++            +  +         +        F   +       L 
Sbjct: 311 -SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLA 369

Query: 214 GFLIAHYGWRSVFYTTGSLGAIWCVAWWFL 243
           G +    G++  +   G +   + +   F 
Sbjct: 370 GNMYESIGFQGAYLVLGLVALGFTLISVFT 399

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	534
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	100.0
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.95
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.44
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.36

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.1e-41  Score=340.68  Aligned_cols=404  Identities=16%  Similarity=0.201  Sum_probs=317.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHhhhcccEEEeeeecccccCCCCCCCCCCCcccccCCCCCCCCCCcchhhhccccccCCCC
Q psy14136         12 VPARVVLYMMSFTGFLVSFMMRTDINIAMVAMVKFQSNANNSNSNSSQPYCYVATEPGTSARGNVSELLFNDTMLLEKPN   91 (534)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~   91 (534)
                      +++||.++..++++++..++++..++.+.|.+                                                
T Consensus        20 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~------------------------------------------------   51 (447)
T d1pw4a_          20 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL------------------------------------------------   51 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHT------------------------------------------------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------------------
Confidence            44678888889999999999999999888766                                                


Q ss_pred             CCCCccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHh
Q psy14136         92 VNEEGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAA--VLHYGALIALRSIQG  169 (534)
Q Consensus        92 ~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--~~~~~~l~~~r~l~G  169 (534)
                         + |+|+|.+|+|++.+++.++++++++++|+++||+|||+++.+++++.+++.++++++.  .++++.+++.|++.|
T Consensus        52 ---~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  127 (447)
T d1pw4a_          52 ---V-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCG  127 (447)
T ss_dssp             ---T-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHH
T ss_pred             ---H-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHH
Confidence               2 5799999999999999999999999999999999999999999999999998876542  236789999999999


Q ss_pred             hhhcchhhhHHHHHhcccCCCcchhhhhh-hhhhhhHHHhhhhHHHHhhhh-cCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        170 IASGLTWPAMYALVGHWIPSNERSRFMSS-FQGFSFGIGLTYPLCGFLIAH-YGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       170 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      ++.|...+...+++.|++|+++|++++++ ..+..+|..+++.+++.+... .+||+.|++.+++.++..++.+++.++.
T Consensus       128 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~  207 (447)
T d1pw4a_         128 WFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDT  207 (447)
T ss_dssp             HHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCS
T ss_pred             HhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccc
Confidence            99999999999999999999999999994 578899999999988887765 4799999999999988888888888887


Q ss_pred             CCCCcccchhhhhhhhh--ccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhhhHhhhCCccccc
Q psy14136        248 PLKHPRITRKELDYIQE--NIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRYMKTILGFSIQTN  325 (534)
Q Consensus       248 p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~  325 (534)
                      |++......++.+....  ..+..+.+....+...+..+++|.++......++.....+....+.|.|+++.++.+..+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (447)
T d1pw4a_         208 PQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKS  287 (447)
T ss_dssp             STTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHH
T ss_pred             hhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchh
Confidence            76654333222221111  1111111223333456778899999999999999999999999999999999899999999


Q ss_pred             hhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHhhhc
Q psy14136        326 GLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL-GCNVALVLITWFVAVTLITAS  404 (534)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  404 (534)
                      +.......+..+++.++.|++.||+++++..       ........+........... ..+.+...+..++.+++.+..
T Consensus       288 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  360 (447)
T d1pw4a_         288 SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG-------ATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGP  360 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSTTCHH-------HHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHH
T ss_pred             hhhhhcchhhhhhhhhhhhhhhhhccccccc-------cccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999887642       11122222222223322222 224455555555666666666


Q ss_pred             ccccchhhhccCCCc-hhHHHHHHhHHHHhh-hhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14136        405 YAGAMANVVDIGPNF-AGPILAFAQTIHMTA-SFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGT  479 (534)
Q Consensus       405 ~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g-~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  479 (534)
                      .+.......|..|++ ||++.|+.+...+++ ..++|.+.|++.|.     .||...|++.+++.+++.++...+..
T Consensus       361 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~  432 (447)
T d1pw4a_         361 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FGWDGGFMVMIGGSILAVILLIVVMI  432 (447)
T ss_dssp             HHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            677778888988877 999999999988875 56689999999999     78888888887777776666555433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=3.5e-28  Score=242.41  Aligned_cols=358  Identities=13%  Similarity=0.088  Sum_probs=249.0

Q ss_pred             CccccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhhhh
Q psy14136         95 EGEFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAV--LHYGALIALRSIQGIAS  172 (534)
Q Consensus        95 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~--~~~~~l~~~r~l~G~g~  172 (534)
                      ++++|+|++++|++.+++.++..++++++|+++||+||||+++++..+..++.++..+...  ......++.+++.+.+.
T Consensus        35 ~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (417)
T d1pv7a_          35 HDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYL  114 (417)
T ss_dssp             HHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTG
T ss_pred             HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc
Confidence            4478999999999999999999999999999999999999999999998888877544421  12233456667777766


Q ss_pred             cchhhhHHHHHhcccCCC--cchhhhh-hhhhhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCCCC
Q psy14136        173 GLTWPAMYALVGHWIPSN--ERSRFMS-SFQGFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDAPL  249 (534)
Q Consensus       173 g~~~~~~~~~i~~~~~~~--~r~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~p~  249 (534)
                      +...........+..+++  ++.+..+ .......+..+++.+++.+.+. +|+..++.......+..++.++..++.++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (417)
T d1pv7a_         115 GFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAPS  193 (417)
T ss_dssp             GGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred             cccccchhhcccccccchhhhhHHHHHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhccccc
Confidence            666666666555555433  3344445 3356778888999988888765 56666666666666666666667677665


Q ss_pred             CCcccchhhhhhhhhccCccccCCCCCcccHHHhhcCHHHHHHHHHHHHHHHHHHHHHhchhhh---hHhhhCCccccch
Q psy14136        250 KHPRITRKELDYIQENIEPTIVGSKGLKVPWVSILTSPPAWAIGITTFGRIWVHYIFIIPGPRY---MKTILGFSIQTNG  326 (534)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~g~s~~~~~  326 (534)
                      ..+..++++.+           +.+.......+.++++..+....................+.+   ..+..+.+....+
T Consensus       194 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (417)
T d1pv7a_         194 SATVANAVGAN-----------HSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFG  262 (417)
T ss_dssp             SSCSSHHHHSC-----------CCCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred             chhhhhhhhhh-----------cccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhc
Confidence            54332222211           111222233344444444433333333333323222222222   2222345556677


Q ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHhhhccc
Q psy14136        327 LLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYLGCNVALVLITWFVAVTLITASYA  406 (534)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (534)
                      .......++..++..+.+++.||.++++.+          .++..+.++..+.+.+.+ +.+...+..++.+++.+...+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~  331 (417)
T d1pv7a_         263 YVTTMGELLNASIMFFAPLIINRIGGKNAL----------LLAGTIMSVRIIGSSFAT-SALEVVILKTLHMFEVPFLLV  331 (417)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHCHHHHH----------HHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhhhhhhhcccccccch----------hhhHHHHHHhhhcccccc-ccchhhHHHHHHHHHHHHHHH
Confidence            778888889999999999999999998753          566666666666666666 677777777777888888888


Q ss_pred             ccchhhhccCCCc-hhHHHHHH-hHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14136        407 GAMANVVDIGPNF-AGPILAFA-QTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVGSCTYFFYQVLGTS  480 (534)
Q Consensus       407 ~~~~~~~~~~p~~-~g~~~g~~-~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  480 (534)
                      ....+..|..|++ |+++.|+. +....+|..++|.+.|++.|.     .|++..|++.+++.++..++..+..++
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~l~~  402 (417)
T d1pv7a_         332 GCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYES-----IGFQGAYLVLGLVALGFTLISVFTLSG  402 (417)
T ss_dssp             HHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH-----HCHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            8889999998876 99999975 566779999999999999999     899999999888887777766665443

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=8.8e-13  Score=131.61  Aligned_cols=155  Identities=12%  Similarity=0.198  Sum_probs=121.1

Q ss_pred             hhhHhhhCCccccchhHhhhHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhhc---CCchh
Q psy14136        312 RYMKTILGFSIQTNGLLTGAPFLCSYLSSVLFCYLADQLFVRNIMSLTNIRKVFTAISQVIPALLVMLIGYL---GCNVA  388 (534)
Q Consensus       312 ~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  388 (534)
                      .++++ +|++..+.|++.+...++..++.++.|+++||+|||+.+          .++.++.+++.++....   ..+..
T Consensus        49 p~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  117 (447)
T d1pw4a_          49 PYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL----------PAGLILAAAVMLFMGFVPWATSSIA  117 (447)
T ss_dssp             HHTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH----------HHHHHHHHHHHHHHHHCHHHHSSSS
T ss_pred             HHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----------HHHHHHHHHHHhhccccchhhhhHH
Confidence            35565 799999999999999999999999999999999999764          45555555555544433   22556


Q ss_pred             HHHHHHHHHHHHhhhcccccchhhhccCCCc-hhHHHHHHhHHHHhhhhHHhHhhhhcccccccChhhHHHHHHHHHHHH
Q psy14136        389 LVLITWFVAVTLITASYAGAMANVVDIGPNF-AGPILAFAQTIHMTASFLSPMVAGYFLQDDETSLESWRQVFLIAGAVG  467 (534)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~~~~~~~f~~~~~~~  467 (534)
                      ..++..++.+++.+...+....++.|..|++ |++++|+.+....+|..++|.+.+.+.+.  .  .+|+..|++.+.+.
T Consensus       118 ~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~--~--~~w~~~~~~~~~~~  193 (447)
T d1pw4a_         118 VMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAW--F--NDWHAALYMPAFCA  193 (447)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH--T--CCSTTCTHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhh--h--hcccccchhhhhhH
Confidence            6777777778888888888888999988866 99999999999999999999988877665  1  47888888877777


Q ss_pred             HHHHHHHHhhcCCc
Q psy14136        468 SCTYFFYQVLGTSE  481 (534)
Q Consensus       468 ~~~~~~~~~~~~~~  481 (534)
                      ++..++.+...+..
T Consensus       194 ~~~~~~~~~~~~~~  207 (447)
T d1pw4a_         194 ILVALFAFAMMRDT  207 (447)
T ss_dssp             HHHHHHHHHHCCCS
T ss_pred             HHHHHHHHHhcccc
Confidence            76666655554443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.36  E-value=8.1e-13  Score=129.69  Aligned_cols=149  Identities=9%  Similarity=0.048  Sum_probs=132.0

Q ss_pred             cccCChhhHHHHHHHHHHHHHHhhcccchhhcccCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh
Q psy14136         97 EFDWDTTTQGAILSSFYWCYILSQVVGGVLTQRFGTKTVFGFSQLVTAICSLLIPQAAVLHYGALIALRSIQGIASGLTW  176 (534)
Q Consensus        97 ~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~~~~~~~l~~~r~l~G~g~g~~~  176 (534)
                      +.+.+....+...+...++..++.++.+++.||+|+|+++.++.++.+++.++.++.  ++.+.+++..++.|++.+...
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~  330 (417)
T d1pv7a_         253 TGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA--TSALEVVILKTLHMFEVPFLL  330 (417)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccchhhhcccccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccc--cccchhhHHHHHHHHHHHHHH
Confidence            556677888999999999999999999999999999999999999999988875443  688999999999999999999


Q ss_pred             hhHHHHHhcccCCCcchhhhhh-hh-hhhhHHHhhhhHHHHhhhhcCCchhhhhhchhhHHHHHHhhhhccCC
Q psy14136        177 PAMYALVGHWIPSNERSRFMSS-FQ-GFSFGIGLTYPLCGFLIAHYGWRSVFYTTGSLGAIWCVAWWFLAFDA  247 (534)
Q Consensus       177 ~~~~~~i~~~~~~~~r~~~~~~-~~-~~~~G~~~g~~l~~~l~~~~gwr~~f~i~~~~~li~~i~~~~~~~~~  247 (534)
                      +...+++.|.+|+++|++..++ .. ...+|..+++.++|++.+++||+..|++.+++.++..++..+.++++
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~  403 (417)
T d1pv7a_         331 VGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGP  403 (417)
T ss_dssp             HHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred             HHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999999999999999994 54 56799999999999999999999999999988888777776666543