Psyllid ID: psy14147

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MVVRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTVS
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHcccccccccccccccccHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHccHHHHHHHccEccccccccccccccccccccHHHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccccccccEEcccc
Coil and Loop (DISEMBL)
MVVRSREVMEIQKDVvqsfpiilycvkpyaceecGKAFRKKFSLTMHQrhvhlndrrYQCDLCLARFVTNSSLIVhkqrhdntprfkcklcpkmftntvs
Flexible Loop (DISEMBL)
mvvrsrevmeiqkdvvqsfpiILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLivhkqrhdntprfkcklcpkmftntvs
Low Complexity Region (SEG)
MVVRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTVS
Disordered region (IsUnstruct)
*********EIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMF*****
Disordered Region (DISOPRED)
MVVRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFT****
Disordered Region (DISEMBL)
********MEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTVS
Disordered Region (DISPRO)
***RSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMF*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVVRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
Q9UK10	706	Zinc finger protein 225 O	yes	N/A	0.72	0.101	0.506	1e-13
Q5MYW4	608	Zinc finger protein 667 O	yes	N/A	0.73	0.120	0.472	3e-13
P08042	402	Zinc finger protein 1 OS=	yes	N/A	0.68	0.169	0.463	4e-13
Q8CJ78	1038	Zinc finger protein 628 O	no	N/A	0.71	0.068	0.458	6e-13
Q5RC79	407	Zinc finger protein 1 hom	no	N/A	0.68	0.167	0.463	7e-13
Q6P2D0	407	Zinc finger protein 1 hom	no	N/A	0.68	0.167	0.463	7e-13
Q5EBL2	1055	Zinc finger protein 628 O	no	N/A	0.71	0.067	0.458	8e-13
Q2TL60	609	Zinc finger protein 667 O	no	N/A	0.73	0.119	0.459	9e-13
Q6ZN57	461	Zinc finger protein 2 hom	no	N/A	0.73	0.158	0.459	2e-12
P08043	459	Zinc finger protein 2 OS=	no	N/A	0.79	0.172	0.412	3e-12

>sp|Q9UK10|ZN225_HUMAN Zinc finger protein 225 OS=Homo sapiens GN=ZNF225 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 26  VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR 85
           VKPY CEECGK F  KF+L MHQR VH  +R Y C  C   F   SS++ HK+ H +   
Sbjct: 537 VKPYKCEECGKGFNSKFNLDMHQR-VHTGERPYNCKECGKSFSRASSILNHKRLHGDEKP 595

Query: 86  FKCKLCPKMFTNT 98
           FKC+ C K FT  
Sbjct: 596 FKCEECGKRFTEN 608

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q5MYW4|ZN667_RAT Zinc finger protein 667 OS=Rattus norvegicus GN=Znf667 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY CEECGKAF  + SLT H+R +H  DR Y+CDLC   F  ++ L  H++ H     +
Sbjct: 467 KPYQCEECGKAFSHRISLTRHKR-IHSEDRPYECDLCGKAFSQSAHLAQHERIHTGEKPY 525

Query: 87  KCKLCPKMFTNTVS 100
            CK+C K FT  +S
Sbjct: 526 ACKICKKSFTQRIS 539

May be involved in transcriptional regulation.

Rattus norvegicus (taxid: 10116)

>sp|P08042|ZFP1_MOUSE Zinc finger protein 1 OS=Mus musculus GN=Zfp1 PE=2 SV=3

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct: 264 KPYGCSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 322

Query: 87  KCKLCPKMF 95
           +C  C K F
Sbjct: 323 ECSECGKSF 331

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q8CJ78|ZN628_MOUSE Zinc finger protein 628 OS=Mus musculus GN=Znf628 PE=2 SV=2

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           +PYAC ECGKAFR    L  H RHVH  +R + C +C   F   S+L  H++ H     F
Sbjct: 528 RPYACTECGKAFRNTSCLRRH-RHVHTGERPHSCSVCGKSFAQTSNLRQHQRVHTGERPF 586

Query: 87  KCKLCPKMFTNT 98
           +C LCPK FT++
Sbjct: 587 RCPLCPKTFTHS 598

Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.

Mus musculus (taxid: 10090)

>sp|Q5RC79|ZFP1_PONAB Zinc finger protein 1 homolog OS=Pongo abelii GN=ZFP1 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct: 266 KPYECSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 324

Query: 87  KCKLCPKMF 95
           +C  C K F
Sbjct: 325 ECSECGKSF 333

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q6P2D0|ZFP1_HUMAN Zinc finger protein 1 homolog OS=Homo sapiens GN=ZFP1 PE=2 SV=2

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct: 266 KPYECSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 324

Query: 87  KCKLCPKMF 95
           +C  C K F
Sbjct: 325 ECSECGKSF 333

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5EBL2|ZN628_HUMAN Zinc finger protein 628 OS=Homo sapiens GN=ZNF628 PE=2 SV=2

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           +PYAC ECGKAFR    L  H RHVH  +R + C +C   F   S+L  H++ H     F
Sbjct: 532 RPYACGECGKAFRNTSCLRRH-RHVHTGERPHACGVCGKSFAQTSNLRQHQRVHTGERPF 590

Query: 87  KCKLCPKMFTNT 98
           +C LCPK FT++
Sbjct: 591 RCPLCPKTFTHS 602

Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.

Homo sapiens (taxid: 9606)

>sp|Q2TL60|ZN667_MOUSE Zinc finger protein 667 OS=Mus musculus GN=Znf667 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY CEECGKAF  + SLT H+R +H  DR Y+CDLC   F  ++ L  H++ H     +
Sbjct: 468 KPYQCEECGKAFSHRISLTRHKR-IHSEDRPYECDLCGKAFSQSAHLAQHERIHTGEKPY 526

Query: 87  KCKLCPKMFTNTVS 100
            CK+C K F   +S
Sbjct: 527 ACKICKKSFAQRIS 540

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q6ZN57|ZFP2_HUMAN Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C ECGKAF +  +LT+HQR  H  ++ YQC  C   F  NSSLI H++ H     +
Sbjct: 156 KPYKCNECGKAFSQSMNLTVHQR-THTGEKPYQCKECGKAFHKNSSLIQHERIHTGEKPY 214

Query: 87  KCKLCPKMFTNTVS 100
           KC  C K FT +++
Sbjct: 215 KCNECGKAFTQSMN 228

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Homo sapiens (taxid: 9606)

>sp|P08043|ZFP2_MOUSE Zinc finger protein 2 OS=Mus musculus GN=Zfp2 PE=2 SV=2

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 21  IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
           +I    KPY C ECGKAF +   L  HQR +H  ++ Y+CD C   F+ NSSLIVH++ H
Sbjct: 372 VIHTGEKPYECTECGKAFSQSAYLIEHQR-IHTGEKPYECDQCGKAFIKNSSLIVHQRIH 430

Query: 81  DNTPRFKCKLCPKMFTNTVS 100
                ++C  C K F+ + +
Sbjct: 431 TGEKPYQCNECGKSFSRSTN 450

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
334313271	860	PREDICTED: zinc finger protein 568-like	0.71	0.082	0.472	4e-13
334313247	454	PREDICTED: zinc finger protein 420-like	0.63	0.138	0.471	2e-12
334313277	705	PREDICTED: zinc finger protein 420-like	0.71	0.100	0.444	2e-12
296471091	378	TPA: hCG1794302-like [Bos taurus]	0.76	0.201	0.454	2e-12
403308282	512	PREDICTED: zinc finger protein 225, part	0.72	0.140	0.506	3e-12
334328909	451	PREDICTED: zinc finger protein 420-like	0.73	0.161	0.459	3e-12
395530004	620	PREDICTED: zinc finger protein 160-like,	0.89	0.143	0.411	3e-12
402905826	706	PREDICTED: zinc finger protein 225 isofo	0.71	0.100	0.513	3e-12
297277256	706	PREDICTED: zinc finger protein 225-like	0.71	0.100	0.513	3e-12
380794347	189	zinc finger protein 225, partial [Macaca	0.71	0.375	0.513	4e-12

>gi|334313271|ref|XP_003339869.1| PREDICTED: zinc finger protein 568-like [Monodelphis domestica]

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C++CGK FR+ F LT+HQR +H  ++ Y+C  C   F  NSSL VH++ H     +
Sbjct: 635 KPYECKQCGKTFRQSFKLTVHQR-IHTGEKPYECKQCGKTFTNNSSLAVHQRVHTGEKPY 693

Query: 87  KCKLCPKMFTNT 98
           +CK C K F NT
Sbjct: 694 ECKQCGKTFRNT 705

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334313247|ref|XP_003339857.1| PREDICTED: zinc finger protein 420-like [Monodelphis domestica]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 45/70 (64%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C+ECGKAF +  SLT+HQR VH  ++ Y+C+ C   F  NSSL VH++ H     +
Sbjct: 116 KPYECKECGKAFNQSSSLTLHQRRVHTGEKPYECNECGKTFSNNSSLTVHQKIHTGEKPY 175

Query: 87  KCKLCPKMFT 96
           +C  C K +T
Sbjct: 176 ECNQCGKTYT 185

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334313277|ref|XP_003339872.1| PREDICTED: zinc finger protein 420-like [Monodelphis domestica]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C++CGK FR+ +SL +HQR +H  ++ Y+C  C   F+ NSSL VH + H     +
Sbjct: 424 KPYECKQCGKTFRQSYSLALHQR-IHTGEKPYECKQCGKTFINNSSLAVHHRVHTGEKPY 482

Query: 87  KCKLCPKMFTNT 98
           KCK C K F+ +
Sbjct: 483 KCKQCGKTFSRS 494

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|296471091|tpg|DAA13206.1| TPA: hCG1794302-like [Bos taurus]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)

Query: 21  IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
           II    KPY C+ECGK F +KF+LT HQR +H  +R Y CD+C   F  +S+LI H++ H
Sbjct: 148 IIHTGEKPYGCDECGKRFGRKFTLTEHQR-IHSGERPYSCDVCGKAFTRSSNLIEHQRTH 206

Query: 81  DNTPRFKCKLCPKMFTN 97
            +   + C  CPK F  
Sbjct: 207 SSEKPYTCSQCPKAFKG 223

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403308282|ref|XP_003944597.1| PREDICTED: zinc finger protein 225, partial [Saimiri boliviensis boliviensis]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 26  VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR 85
           VKPY CEECGK +  KF+L MHQR VH  +R Y C  C   F   SS++ HK+ HD+   
Sbjct: 381 VKPYKCEECGKGYNSKFNLDMHQR-VHTGERPYNCKECGKSFSRASSILNHKRLHDDEKP 439

Query: 86  FKCKLCPKMFTNT 98
           FKC+ C K FT  
Sbjct: 440 FKCEECGKRFTEN 452

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334328909|ref|XP_001376209.2| PREDICTED: zinc finger protein 420-like [Monodelphis domestica]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C++CGKAFR+  SLT HQR +H  ++ Y+C  C   F  +S+L  H++ H     +
Sbjct: 353 KPYTCKDCGKAFRQMSSLTRHQR-IHTEEKPYECQECGKAFSNSSNLTKHQRMHSGEKPY 411

Query: 87  KCKLCPKMFTNTVS 100
           KCK C K FTN  S
Sbjct: 412 KCKECGKAFTNCSS 425

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395530004|ref|XP_003767094.1| PREDICTED: zinc finger protein 160-like, partial [Sarcophilus harrisii]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 11  IQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTN 70
           I++D + +   I    KPY C +CGKAF +  SL +HQR VH  ++ Y+C  C   F  N
Sbjct: 481 IRRDSLAAHQKIHTGEKPYKCNQCGKAFTQNASLALHQR-VHTGEKPYKCSQCGKAFTQN 539

Query: 71  SSLIVHKQRHDNTPRFKCKLCPKMFTNTVS 100
           +SL+VH++ H     +KC  C K FT +VS
Sbjct: 540 ASLVVHQRIHAGEKPYKCNQCGKAFTQSVS 569

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402905826|ref|XP_003915709.1| PREDICTED: zinc finger protein 225 isoform 2 [Papio anubis]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 26  VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR 85
           VKPY CEECGK F  KF+L MHQR VH  +R Y C  C   F   SS++ HK+ H +   
Sbjct: 537 VKPYKCEECGKGFNSKFNLDMHQR-VHTGERPYHCKECGKSFSRASSILNHKRLHGDEKP 595

Query: 86  FKCKLCPKMFTN 97
           FKC+ C K FT+
Sbjct: 596 FKCEECGKRFTD 607

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|297277256|ref|XP_002801320.1| PREDICTED: zinc finger protein 225-like [Macaca mulatta]

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 26  VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR 85
           VKPY CEECGK F  KF+L MHQR VH  +R Y C  C   F   SS++ HK+ H +   
Sbjct: 537 VKPYKCEECGKGFNSKFNLDMHQR-VHTGERPYNCKECGKSFSRASSILNHKRLHGDEKP 595

Query: 86  FKCKLCPKMFTN 97
           FKC+ C K FT+
Sbjct: 596 FKCEECGKRFTD 607

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|380794347|gb|AFE69049.1| zinc finger protein 225, partial [Macaca mulatta]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR 85
          VKPY CEECGK F  KF+L MHQR VH  +R Y C  C   F   SS++ HK+ H +   
Sbjct: 20 VKPYKCEECGKGFNSKFNLDMHQR-VHTGERPYNCKECGKSFSRASSILNHKRLHGDEKP 78

Query: 86 FKCKLCPKMFTN 97
          FKC+ C K FT+
Sbjct: 79 FKCEECGKRFTD 90

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
RGD|1359114	608	Zfp667 "zinc finger protein 66	0.73	0.120	0.472	1.6e-14
UNIPROTKB|Q5MYW4	608	Znf667 "Zinc finger protein 66	0.73	0.120	0.472	1.6e-14
UNIPROTKB|F1N130	559	F1N130 "Uncharacterized protei	0.68	0.121	0.478	1.8e-14
UNIPROTKB|Q9UK10	706	ZNF225 "Zinc finger protein 22	0.7	0.099	0.521	3.5e-14
RGD|1565049	402	Zfp1 "zinc finger protein 1" [	0.68	0.169	0.463	3.9e-14
MGI|MGI:99154	402	Zfp1 "zinc finger protein 1" [	0.68	0.169	0.463	3.9e-14
UNIPROTKB|J3KNQ1	374	ZFP1 "Zinc finger protein 1 ho	0.68	0.181	0.463	4.1e-14
UNIPROTKB|Q6P2D0	407	ZFP1 "Zinc finger protein 1 ho	0.68	0.167	0.463	5.2e-14
UNIPROTKB|I3LIM1	411	ZFP1 "Uncharacterized protein"	0.68	0.165	0.463	5.3e-14
UNIPROTKB|F1MTX5	415	ZFP1 "Uncharacterized protein"	0.68	0.163	0.463	5.4e-14

RGD|1359114 Zfp667 "zinc finger protein 667" [Rattus norvegicus (taxid:10116)]

 Score = 195 (73.7 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 35/74 (47%), Positives = 46/74 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY CEECGKAF  + SLT H+R +H  DR Y+CDLC   F  ++ L  H++ H     +
Sbjct:   467 KPYQCEECGKAFSHRISLTRHKR-IHSEDRPYECDLCGKAFSQSAHLAQHERIHTGEKPY 525

Query:    87 KCKLCPKMFTNTVS 100
              CK+C K FT  +S
Sbjct:   526 ACKICKKSFTQRIS 539

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5MYW4 Znf667 "Zinc finger protein 667" [Rattus norvegicus (taxid:10116)]

 Score = 195 (73.7 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 35/74 (47%), Positives = 46/74 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY CEECGKAF  + SLT H+R +H  DR Y+CDLC   F  ++ L  H++ H     +
Sbjct:   467 KPYQCEECGKAFSHRISLTRHKR-IHSEDRPYECDLCGKAFSQSAHLAQHERIHTGEKPY 525

Query:    87 KCKLCPKMFTNTVS 100
              CK+C K FT  +S
Sbjct:   526 ACKICKKSFTQRIS 539

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1N130 F1N130 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 194 (73.4 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 33/69 (47%), Positives = 45/69 (65%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY C+ECGK F +KF+LT HQR +H  +R Y CD+C   F  +S+LI H++ H +   +
Sbjct:   401 KPYGCDECGKRFGRKFTLTEHQR-IHSGERPYSCDVCGKAFTRSSNLIEHQRTHSSEKPY 459

Query:    87 KCKLCPKMF 95
              C  CPK F
Sbjct:   460 TCSQCPKAF 468

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9UK10 ZNF225 "Zinc finger protein 225" [Homo sapiens (taxid:9606)]

 Score = 193 (73.0 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 37/71 (52%), Positives = 44/71 (61%)

Query:    26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR 85
             VKPY CEECGK F  KF+L MHQR VH  +R Y C  C   F   SS++ HK+ H +   
Sbjct:   537 VKPYKCEECGKGFNSKFNLDMHQR-VHTGERPYNCKECGKSFSRASSILNHKRLHGDEKP 595

Query:    86 FKCKLCPKMFT 96
             FKC+ C K FT
Sbjct:   596 FKCEECGKRFT 606

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

RGD|1565049 Zfp1 "zinc finger protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 188 (71.2 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct:   264 KPYGCNECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 322

Query:    87 KCKLCPKMF 95
             +C  C K F
Sbjct:   323 ECSECGKSF 331

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:99154 Zfp1 "zinc finger protein 1" [Mus musculus (taxid:10090)]

 Score = 188 (71.2 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct:   264 KPYGCSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 322

Query:    87 KCKLCPKMF 95
             +C  C K F
Sbjct:   323 ECSECGKSF 331

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J3KNQ1 ZFP1 "Zinc finger protein 1 homolog" [Homo sapiens (taxid:9606)]

 Score = 187 (70.9 bits), Expect = 4.1e-14, P = 4.1e-14
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct:   233 KPYECSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 291

Query:    87 KCKLCPKMF 95
             +C  C K F
Sbjct:   292 ECSECGKSF 300

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q6P2D0 ZFP1 "Zinc finger protein 1 homolog" [Homo sapiens (taxid:9606)]

 Score = 187 (70.9 bits), Expect = 5.2e-14, P = 5.2e-14
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct:   266 KPYECSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 324

Query:    87 KCKLCPKMF 95
             +C  C K F
Sbjct:   325 ECSECGKSF 333

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|I3LIM1 ZFP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct:   270 KPYECSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 328

Query:    87 KCKLCPKMF 95
             +C  C K F
Sbjct:   329 ECSECGKSF 337

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MTX5 ZFP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 187 (70.9 bits), Expect = 5.4e-14, P = 5.4e-14
 Identities = 32/69 (46%), Positives = 43/69 (62%)

Query:    27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
             KPY C ECGK F +KF LT HQR +H  +R Y+C+ C   F   S+LI+H++ H    R+
Sbjct:   277 KPYECSECGKTFAQKFELTTHQR-IHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRY 335

Query:    87 KCKLCPKMF 95
             +C  C K F
Sbjct:   336 ECSECGKSF 344

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UK10	ZN225_HUMAN	No assigned EC number	0.5068	0.72	0.1019	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	100
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.002

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 21/76 (27%)

Query: 27  KPYACE--ECGKAFRKKFSLTMHQRHVHLN------------------DRRYQCDLCLAR 66
           KPY C    C K ++ +  L  H  H H N                  D+ Y+C++C  R
Sbjct: 348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKR 407

Query: 67  FVTNSSLIVH-KQRHD 81
           +   + L  H K  HD
Sbjct: 408 YKNLNGLKYHRKHSHD 423

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
KOG2462|consensus	279		99.94
KOG2462|consensus	279		99.91
KOG3623|consensus	1007		99.76
KOG3576|consensus	267		99.75
KOG1074|consensus	958		99.72
KOG3623|consensus	1007		99.69
KOG3576|consensus	267		99.63
KOG3608|consensus	467		99.35
PHA02768	55	hypothetical protein; Provisional	99.33
PHA00733	128	hypothetical protein	99.31
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.26
KOG3608|consensus	467		99.26
KOG1074|consensus	958		99.22
PLN03086	567	PRLI-interacting factor K; Provisional	99.17
PHA00733	128	hypothetical protein	99.13
PHA02768	55	hypothetical protein; Provisional	99.04
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.95
PHA00616	44	hypothetical protein	98.83
PLN03086	567	PRLI-interacting factor K; Provisional	98.81
PHA00732	79	hypothetical protein	98.61
PHA00732	79	hypothetical protein	98.56
PHA00616	44	hypothetical protein	98.54
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.3
KOG3993|consensus	500		98.17
KOG3993|consensus	500		98.13
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.99
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.98
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.84
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.84
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.81
PRK04860	160	hypothetical protein; Provisional	97.81
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.78
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.77
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.71
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.68
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.6
smart00355	26	ZnF_C2H2 zinc finger.	97.31
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.21
smart00355	26	ZnF_C2H2 zinc finger.	97.06
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.0
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.95
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.82
PRK04860	160	hypothetical protein; Provisional	96.75
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.34
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.25
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.11
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	95.89
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.33
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.2
KOG1146|consensus	1406		94.87
COG4049	65	Uncharacterized protein containing archaeal-type C	94.27
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	93.41
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	93.25
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	93.24
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	93.05
COG5048	467	FOG: Zn-finger [General function prediction only]	92.55
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	92.39
KOG2893|consensus	341		92.38
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	92.23
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.23
COG1592	166	Rubrerythrin [Energy production and conversion]	92.13
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	91.92
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	91.3
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.48
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	90.08
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	89.95
KOG2186|consensus	276		89.5
PF15135	278	UPF0515: Uncharacterised protein UPF0515	89.39
smart00531	147	TFIIE Transcription initiation factor IIE.	89.37
COG5048	467	FOG: Zn-finger [General function prediction only]	89.0
PRK09678	72	DNA-binding transcriptional regulator; Provisional	88.91
KOG4173|consensus	253		88.44
PRK06266	178	transcription initiation factor E subunit alpha; V	88.32
KOG2186|consensus	276		88.26
KOG2893|consensus	341		88.15
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	87.81
PF14353	128	CpXC: CpXC protein	87.28
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	87.08
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	86.84
KOG1146|consensus	1406		86.8
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	86.48
PF13451	49	zf-trcl: Probable zinc-binding domain	85.66
PHA00626	59	hypothetical protein	85.4
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	84.97
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	84.93
PLN02294	174	cytochrome c oxidase subunit Vb	83.58
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	83.15
PF12760	46	Zn_Tnp_IS1595: Transposase zinc-ribbon domain; Int	83.08
KOG3408|consensus	129		82.94
smart00154	39	ZnF_AN1 AN1-like Zinc finger. Zinc finger at the C	82.76
PF12907	40	zf-met2: Zinc-binding	82.6
PRK03824	135	hypA hydrogenase nickel incorporation protein; Pro	82.22
cd00924	97	Cyt_c_Oxidase_Vb Cytochrome c oxidase subunit Vb.	81.52
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	81.52
KOG2785|consensus	390		81.36
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	81.07

>KOG2462|consensus

Probab=99.94  E-value=2.3e-28  Score=139.59  Aligned_cols=93  Identities=25%  Similarity=0.473  Sum_probs=86.2

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      ++.||+.+.+-.+|+.|+++|.  -+.+|.+||+.|.+..-|+.|++ .|+|++||.|+.|+++|..+++|..|+++|.+
T Consensus       164 C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiR-THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~  240 (279)
T KOG2462|consen  164 CKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIR-THTGEKPFSCPHCGKAFADRSNLRAHMQTHSD  240 (279)
T ss_pred             CCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccc-cccCCCCccCCcccchhcchHHHHHHHHhhcC
Confidence            6778899999999999999986  46899999999999999999995 99999999999999999999999999999999


Q ss_pred             CCCeecCCCccccCCC
Q psy14147         83 TPRFKCKLCPKMFTNT   98 (100)
Q Consensus        83 ~~~~~C~~C~~~f~~~   98 (100)
                      .++|+|+.|+|.|+.+
T Consensus       241 ~K~~qC~~C~KsFsl~  256 (279)
T KOG2462|consen  241 VKKHQCPRCGKSFALK  256 (279)
T ss_pred             CccccCcchhhHHHHH
Confidence            9999999999999754

>KOG2462|consensus

Probab=99.91  E-value=6.1e-26  Score=129.76  Aligned_cols=95  Identities=22%  Similarity=0.378  Sum_probs=87.6

Q ss_pred             cchHHHHHHHHHHHHhccccccC---CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHh
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYC---VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQR   79 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~---~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~   79 (100)
                      +.+||+++.+.++|.+|..+|..   .+.+.|..|++.|.....|..|++ +|+  .+.+|.+||+.|..++-|+.|+|+
T Consensus       133 c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHir-TH~--l~c~C~iCGKaFSRPWLLQGHiRT  209 (279)
T KOG2462|consen  133 CPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIR-THT--LPCECGICGKAFSRPWLLQGHIRT  209 (279)
T ss_pred             ccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhh-ccC--CCcccccccccccchHHhhccccc
Confidence            56789999999999999999874   677999999999999999999995 665  689999999999999999999999


Q ss_pred             cCCCCCeecCCCccccCCCCC
Q psy14147         80 HDNTPRFKCKLCPKMFTNTVS  100 (100)
Q Consensus        80 ~~~~~~~~C~~C~~~f~~~~s  100 (100)
                      |||||||.|+.|+|+|++.|+
T Consensus       210 HTGEKPF~C~hC~kAFADRSN  230 (279)
T KOG2462|consen  210 HTGEKPFSCPHCGKAFADRSN  230 (279)
T ss_pred             ccCCCCccCCcccchhcchHH
Confidence            999999999999999998764

>KOG3623|consensus

Probab=99.76  E-value=3.1e-19  Score=113.55  Aligned_cols=74  Identities=38%  Similarity=0.694  Sum_probs=69.6

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCCCC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTVS  100 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~s  100 (100)
                      ..+|.|+.|++.|.-.+.|.+|. ..|+|.+||+|.+|.++|...-.|..|.|.|.||+||+|..|+|.|+..+|
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHK-YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGS  965 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHK-YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGS  965 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhh-hhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccc
Confidence            46799999999999999999999 599999999999999999999999999999999999999999999997654

>KOG3576|consensus

Probab=99.75  E-value=3.4e-19  Score=98.75  Aligned_cols=92  Identities=26%  Similarity=0.410  Sum_probs=84.0

Q ss_pred             ccchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcC
Q psy14147          2 VVRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus         2 ~~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      +++.|++.|..+..|.+|++.|...+.+-|..||+.|....+|..|++ .|+|.+||.|..|+++|.+.-.|..|++.-+
T Consensus       119 tCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  119 TCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             eeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhhhhHHHHhhccHHHHHHHHc
Confidence            488999999999999999999999999999999999999999999995 9999999999999999999999999987433


Q ss_pred             -----------CCCCeecCCCccc
Q psy14147         82 -----------NTPRFKCKLCPKM   94 (100)
Q Consensus        82 -----------~~~~~~C~~C~~~   94 (100)
                                 .++.|.|.+||..
T Consensus       198 gv~~~yaykerr~kl~vcedcg~t  221 (267)
T KOG3576|consen  198 GVQHQYAYKERRAKLYVCEDCGYT  221 (267)
T ss_pred             CchHHHHHHHhhhheeeecccCCC
Confidence                       2467899999854

>KOG1074|consensus

Probab=99.72  E-value=1.4e-18  Score=111.64  Aligned_cols=46  Identities=22%  Similarity=0.290  Sum_probs=43.7

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHH
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +|-|.++|-..+.|+.|.++|.+++||+|++||..|.++.+|..|.
T Consensus       356 Cr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~  401 (958)
T KOG1074|consen  356 CRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHF  401 (958)
T ss_pred             hhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeee
Confidence            6789999999999999999999999999999999999999998876

>KOG3623|consensus

Probab=99.69  E-value=3.2e-17  Score=104.57  Aligned_cols=97  Identities=20%  Similarity=0.314  Sum_probs=82.0

Q ss_pred             cchHHHHHHHHHHHHhcccccc--CCCceeCchhhhhccChhHHHHHHhhhcCC-------------CCCccCccccccc
Q psy14147          3 VRSREVMEIQKDVVQSFPIILY--CVKPYACEECGKAFRKKFSLTMHQRHVHLN-------------DRRYQCDLCLARF   67 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~--~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~-------------~~~~~c~~c~~~~   67 (100)
                      +.-|+..+.....|+.|++..+  .+..|.|..|..+|.++..|..|+ ..|..             -+.|.|.+|+++|
T Consensus       213 cpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFKCtECgKAF  291 (1007)
T KOG3623|consen  213 CPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFKCTECGKAF  291 (1007)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhccccccccchhh
Confidence            4456777778889999986543  244589999999999999999999 57753             2458999999999


Q ss_pred             cChhHHHHHHHhcCCCCCeecCCCccccCCCCC
Q psy14147         68 VTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTVS  100 (100)
Q Consensus        68 ~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~s  100 (100)
                      ...-.|..|+|.|.||+||.|+.|+|.|+..+|
T Consensus       292 KfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGS  324 (1007)
T KOG3623|consen  292 KFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGS  324 (1007)
T ss_pred             hhHHHHHhhheeecCCCCcCCcccccccccCCc
Confidence            999999999999999999999999999987654

>KOG3576|consensus

Probab=99.63  E-value=4e-17  Score=90.61  Aligned_cols=73  Identities=30%  Similarity=0.617  Sum_probs=67.8

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCCC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTV   99 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~   99 (100)
                      ...|.|.+|++.|....-|..|++ .|...+.+.|..||++|...-+|.+|.++|+|.+||+|..|+|+|+...
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrc  187 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRC  187 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhc
Confidence            455999999999999999999994 8998899999999999999999999999999999999999999998653

>KOG3608|consensus

Probab=99.35  E-value=5.5e-13  Score=79.72  Aligned_cols=92  Identities=24%  Similarity=0.373  Sum_probs=51.3

Q ss_pred             cchHHHHHHHHHHHHhccccc--cCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHH-h
Q psy14147          3 VRSREVMEIQKDVVQSFPIIL--YCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQ-R   79 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~--~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~   79 (100)
                      +..+|.+|..+.-|..|.+.-  -...+|.|..|-+.|.+...|..|+. .|.  .-|.|+.|..+...++.|..|++ .
T Consensus       210 Cp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~-rHv--n~ykCplCdmtc~~~ssL~~H~r~r  286 (467)
T KOG3608|consen  210 CPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVV-RHV--NCYKCPLCDMTCSSASSLTTHIRYR  286 (467)
T ss_pred             cchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHH-Hhh--hcccccccccCCCChHHHHHHHHhh
Confidence            344444444444444443321  12334555555555555544555542 332  24667777777777777777777 3


Q ss_pred             cCCCCCeecCCCccccCC
Q psy14147         80 HDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        80 ~~~~~~~~C~~C~~~f~~   97 (100)
                      |...+||+|..|.+.|.+
T Consensus       287 Hs~dkpfKCd~Cd~~c~~  304 (467)
T KOG3608|consen  287 HSKDKPFKCDECDTRCVR  304 (467)
T ss_pred             hccCCCccccchhhhhcc
Confidence            556778888887776654

>PHA02768 hypothetical protein; Provisional

Probab=99.33  E-value=1.4e-12  Score=58.53  Aligned_cols=41  Identities=24%  Similarity=0.598  Sum_probs=29.9

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTV   99 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~   99 (100)
                      .|.|+.||+.|.....|..|++.|+  +|++|..|++.|...+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTG   45 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccc
Confidence            4677777777777777777777777  5777777777776554

>PHA00733 hypothetical protein

Probab=99.31  E-value=1.1e-12  Score=69.39  Aligned_cols=83  Identities=20%  Similarity=0.244  Sum_probs=56.0

Q ss_pred             HHHHhccccccCCCceeCchhhhhccChhHHHHHH--h--hhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         14 DVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQ--R--HVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        14 ~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~--~--~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      +.|.++-.....++++.|.+|.+.|.....|..+.  .  ..+.+..||.|..|++.|.....|..|.+.+  +.+|.|+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            33444333334467788888888777666555541  0  1233467888888888888888888888865  3568888


Q ss_pred             CCccccCCC
Q psy14147         90 LCPKMFTNT   98 (100)
Q Consensus        90 ~C~~~f~~~   98 (100)
                      .|++.|.+.
T Consensus       104 ~CgK~F~~~  112 (128)
T PHA00733        104 VCGKEFRNT  112 (128)
T ss_pred             CCCCccCCH
Confidence            888888764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.26  E-value=6.2e-12  Score=48.83  Aligned_cols=26  Identities=35%  Similarity=0.698  Sum_probs=23.0

Q ss_pred             HHHHHHHhcCCCCCeecCCCccccCC
Q psy14147         72 SLIVHKQRHDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        72 ~l~~h~~~~~~~~~~~C~~C~~~f~~   97 (100)
                      +|..|++.|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47889999999999999999999874

...

>KOG3608|consensus

Probab=99.26  E-value=9.7e-12  Score=74.51  Aligned_cols=85  Identities=26%  Similarity=0.399  Sum_probs=60.5

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +.-+-+.|.++..|..|++.|-  .-|.|+.|+.+.+..++|..|++..|...+||.|..|...+...++|+.|...|. 
T Consensus       240 C~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-  316 (467)
T KOG3608|consen  240 CAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-  316 (467)
T ss_pred             HHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-
Confidence            3456778888888888887764  3477777777777777777777766777777777777777777777777776665 


Q ss_pred             CCCeecCC
Q psy14147         83 TPRFKCKL   90 (100)
Q Consensus        83 ~~~~~C~~   90 (100)
                      +-.|.|..
T Consensus       317 ~~~y~C~h  324 (467)
T KOG3608|consen  317 KTVYQCEH  324 (467)
T ss_pred             ccceecCC
Confidence            34455543

>KOG1074|consensus

Probab=99.22  E-value=2e-12  Score=84.08  Aligned_cols=90  Identities=24%  Similarity=0.448  Sum_probs=70.3

Q ss_pred             HHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCC----CccCc---cccccccChhHHHHHHHh
Q psy14147          7 EVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDR----RYQCD---LCLARFVTNSSLIVHKQR   79 (100)
Q Consensus         7 ~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~----~~~c~---~c~~~~~~~~~l~~h~~~   79 (100)
                      -++..=++.|+.|.++|.+++||+|.+||++|.++.+|..|+ ..|....    .+.|+   +|.+.|...-.|..|.+.
T Consensus       612 ~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIri  690 (958)
T KOG1074|consen  612 LRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRI  690 (958)
T ss_pred             eecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhcccccccccccceEEe
Confidence            344455688999999999999999999999999999999999 5776543    36788   888889888889999998


Q ss_pred             cCCC-CC------------eecCCCccccCC
Q psy14147         80 HDNT-PR------------FKCKLCPKMFTN   97 (100)
Q Consensus        80 ~~~~-~~------------~~C~~C~~~f~~   97 (100)
                      |.+. .+            -+|..|.+.|.+
T Consensus       691 H~~~~~s~g~~a~e~~~~adq~~~~qk~~~~  721 (958)
T KOG1074|consen  691 HLGGQISNGGTAAEGILAADQCSSCQKTFSD  721 (958)
T ss_pred             ecCCCCCCCcccccccchhcccchhhhcccc
Confidence            8732 11            357777777643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.17  E-value=1.9e-11  Score=77.73  Aligned_cols=88  Identities=15%  Similarity=0.253  Sum_probs=70.4

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccC----------hhH
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVT----------NSS   72 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~----------~~~   72 (100)
                      +..|+..|. ...|..|+..++  +++.|+ |+..+ ....|..|+ ..|.+.+++.|+.|+..+..          ...
T Consensus       456 C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~  529 (567)
T PLN03086        456 CEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQ-ASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRG  529 (567)
T ss_pred             CCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhh-hccCCCCceeCCCCCCccccCccccchhhhhhh
Confidence            455677775 577899998874  789999 99755 568899998 48888999999999988742          347


Q ss_pred             HHHHHHhcCCCCCeecCCCccccCC
Q psy14147         73 LIVHKQRHDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        73 l~~h~~~~~~~~~~~C~~C~~~f~~   97 (100)
                      |..|.... |.+++.|..||+.+..
T Consensus       530 Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        530 MSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             HHHHHHhc-CCcceEccccCCeeee
Confidence            88888875 8899999999998764

>PHA00733 hypothetical protein

Probab=99.13  E-value=1.5e-10  Score=61.37  Aligned_cols=65  Identities=25%  Similarity=0.433  Sum_probs=53.5

Q ss_pred             HHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         14 DVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        14 ~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +.|.+|+..+ +.+||.|+.|++.|.....|..|++ .+  ..++.|..|+++|.....|..|....++
T Consensus        60 ~~l~~~~~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r-~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         60 SYLYKLLTSK-AVSPYVCPLCLMPFSSSVSLKQHIR-YT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHhhcccC-CCCCccCCCCCCcCCCHHHHHHHHh-cC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3455565554 4889999999999999999999984 54  3579999999999999999999886554

>PHA02768 hypothetical protein; Provisional

Probab=99.04  E-value=9.8e-11  Score=52.65  Aligned_cols=42  Identities=24%  Similarity=0.461  Sum_probs=36.9

Q ss_pred             eeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHH
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSL   73 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l   73 (100)
                      |.|+.||+.|.....|..|++ .|.  +++.|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r-~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLR-KHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHH-hcC--CcccCCcccceeccccee
Confidence            789999999999999999995 787  688999999999876554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.95  E-value=1.3e-10  Score=45.05  Aligned_cols=24  Identities=33%  Similarity=0.634  Sum_probs=13.6

Q ss_pred             HHhccccccCCCceeCchhhhhcc
Q psy14147         16 VQSFPIILYCVKPYACEECGKAFR   39 (100)
Q Consensus        16 l~~h~~~~~~~~~~~c~~C~~~f~   39 (100)
                      |..|+++|.+++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555553

...

>PHA00616 hypothetical protein

Probab=98.83  E-value=2.2e-09  Score=46.12  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=17.6

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      ||+|+.||+.|...+.+..|++.|++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            345555555555555555555555555555443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.81  E-value=8.8e-09  Score=65.96  Aligned_cols=65  Identities=23%  Similarity=0.544  Sum_probs=55.0

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFT   96 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   96 (100)
                      ++.+.|..|++.|. ...|..|+. .+.  .++.|+ |+..+ ....|..|+..|..++|+.|+.|++.|.
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~-~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMK-VFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHH-hcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccc
Confidence            35578999999996 577999995 553  689999 99755 6689999999999999999999999884

>PHA00732 hypothetical protein

Probab=98.61  E-value=4e-08  Score=47.91  Aligned_cols=49  Identities=24%  Similarity=0.453  Sum_probs=37.8

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      ||.|..|++.|.....|..|++..|.   ++.|+.|++.|..   +..|.++..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~---l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR---LNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC---hhhhhcccCC
Confidence            57899999999999999999842354   3579999999874   6678765443

>PHA00732 hypothetical protein

Probab=98.56  E-value=4.5e-08  Score=47.71  Aligned_cols=33  Identities=12%  Similarity=0.162  Sum_probs=17.9

Q ss_pred             chHHHHHHHHHHHHhcccc-ccCCCceeCchhhhhcc
Q psy14147          4 RSREVMEIQKDVVQSFPII-LYCVKPYACEECGKAFR   39 (100)
Q Consensus         4 ~~~~~~~~~~~~l~~h~~~-~~~~~~~~c~~C~~~f~   39 (100)
                      ..++..|.....|..|++. |.   ++.|+.|++.|.
T Consensus         5 ~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~   38 (79)
T PHA00732          5 PICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR   38 (79)
T ss_pred             CCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC
Confidence            4455556666666666553 32   235666666655

>PHA00616 hypothetical protein

Probab=98.54  E-value=6e-08  Score=41.72  Aligned_cols=36  Identities=25%  Similarity=0.437  Sum_probs=31.2

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCCCCccCcccc
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCL   64 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~   64 (100)
                      ||+|..||+.|.....|..|++ .|++..++.++.--
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r-~~hg~~~~~~~~~y   36 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLL-SVHKQNKLTLEYFY   36 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHH-HhcCCCccceeEEE
Confidence            6899999999999999999995 88888998886543

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.30  E-value=1.6e-06  Score=39.36  Aligned_cols=51  Identities=27%  Similarity=0.541  Sum_probs=39.2

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCC-CCccCccccccccChhHHHHHHHhcC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLND-RRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      .|.|+.|++ ..+...|..|....|..+ +.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            488999999 566778999987677764 4688999987643  48888887654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3993|consensus

Probab=98.17  E-value=2.6e-07  Score=57.09  Aligned_cols=69  Identities=26%  Similarity=0.632  Sum_probs=37.2

Q ss_pred             eeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcC---------------------------
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHD---------------------------   81 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~---------------------------   81 (100)
                      |.|..|...|.+.-.|..|.. ...--.-|.|++|++.|.-..+|.+|.|.|.                           
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC-~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRC-PRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccC-CeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            455555555555555544441 2222223455555555555555555555431                           


Q ss_pred             ------CCCCeecCCCccccCCC
Q psy14147         82 ------NTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        82 ------~~~~~~C~~C~~~f~~~   98 (100)
                            .+..|.|..|+|.|..+
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRq  369 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQ  369 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHH
Confidence                  12358999999999753

>KOG3993|consensus

Probab=98.13  E-value=2.1e-06  Score=53.20  Aligned_cols=79  Identities=20%  Similarity=0.317  Sum_probs=63.2

Q ss_pred             ccchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCC---------------------------
Q psy14147          2 VVRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLN---------------------------   54 (100)
Q Consensus         2 ~~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~---------------------------   54 (100)
                      +++-|...|...-.|-+|.-..-..-.|+|..|++.|...++|..|.+. |..                           
T Consensus       269 iCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRW-HKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  269 ICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRW-HKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcc-cCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            3667888899999999997543344569999999999999999999862 311                           


Q ss_pred             ------CCCccCccccccccChhHHHHHHHhcC
Q psy14147         55 ------DRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        55 ------~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                            +..|.|..|++.|.....|..|+.+|.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence                  124789999999999999999987765

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.99  E-value=4.5e-06  Score=31.04  Aligned_cols=21  Identities=48%  Similarity=0.926  Sum_probs=14.0

Q ss_pred             eeCchhhhhccChhHHHHHHh
Q psy14147         29 YACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      |.|+.|++.|.....|..|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            456677777777777766663

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.98  E-value=4.4e-06  Score=31.06  Aligned_cols=23  Identities=39%  Similarity=0.833  Sum_probs=20.7

Q ss_pred             ccCccccccccChhHHHHHHHhc
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~   80 (100)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57999999999999999998864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.84  E-value=1.1e-05  Score=31.14  Aligned_cols=21  Identities=43%  Similarity=1.028  Sum_probs=14.7

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      ||.|..|++.|.....|..|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~   21 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHK   21 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCccCCccCChhHHHHHh
Confidence            466777777777777777776

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.84  E-value=1.6e-05  Score=29.53  Aligned_cols=21  Identities=48%  Similarity=0.959  Sum_probs=12.0

Q ss_pred             eeCchhhhhccChhHHHHHHh
Q psy14147         29 YACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      |.|++|+..|.+...|..|+.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHH
Confidence            456666666666666666663

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.81  E-value=1.3e-05  Score=30.97  Aligned_cols=26  Identities=35%  Similarity=0.609  Sum_probs=22.9

Q ss_pred             CccCccccccccChhHHHHHHHhcCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +|.|..|++.|.....|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57899999999999999999987753

>PRK04860 hypothetical protein; Provisional

Probab=97.81  E-value=1.5e-05  Score=43.92  Aligned_cols=37  Identities=16%  Similarity=0.535  Sum_probs=32.0

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   97 (100)
                      +|.|. |+.   ....+..|.++++++++|.|..|++.|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            58897 887   56678899999999999999999998864

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.78  E-value=7.1e-06  Score=49.38  Aligned_cols=63  Identities=25%  Similarity=0.493  Sum_probs=36.4

Q ss_pred             CCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         26 VKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        26 ~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      +|||+|++  |.+.++....|..|+..-|-..+...-+          .-..+.-.-...+||.|+.|+|.|.+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNl  411 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNL  411 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccC
Confidence            48899987  8888988888888874222111111111          000011112346788888888887653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.77  E-value=2.3e-05  Score=29.11  Aligned_cols=24  Identities=33%  Similarity=0.695  Sum_probs=19.2

Q ss_pred             ccCccccccccChhHHHHHHHhcC
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      |.|+.|++.|.....|..|+..++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            579999999999999999998753

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.71  E-value=3e-05  Score=39.15  Aligned_cols=71  Identities=13%  Similarity=0.021  Sum_probs=21.3

Q ss_pred             chHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhc
Q psy14147          4 RSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH   80 (100)
Q Consensus         4 ~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~   80 (100)
                      ..|+..|.....|..|+...++...   . ....+.....+..+.. .. -...+.|..|+..|.....|..|++.+
T Consensus         3 ~~C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~-~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    3 LFCDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLR-KK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccc---c-cccccccccccccccc-cc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3467778888888888754333211   1 1111222223333331 11 122689999999999999999999964

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.68  E-value=2.6e-05  Score=47.03  Aligned_cols=25  Identities=20%  Similarity=0.620  Sum_probs=21.0

Q ss_pred             CCCCccCcc--ccccccChhHHHHHHH
Q psy14147         54 NDRRYQCDL--CLARFVTNSSLIVHKQ   78 (100)
Q Consensus        54 ~~~~~~c~~--c~~~~~~~~~l~~h~~   78 (100)
                      +++||.|++  |.+.+...-.|..|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhh
Confidence            358999977  8899998888988876

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.60  E-value=8.2e-05  Score=32.90  Aligned_cols=32  Identities=16%  Similarity=0.241  Sum_probs=16.4

Q ss_pred             CCCCccCccccccccChhHHHHHHHhcCCCCC
Q psy14147         54 NDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR   85 (100)
Q Consensus        54 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~   85 (100)
                      .+.|..|++|+..+.+..+|..|+...++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34456666666666666666666666555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.31  E-value=0.00032  Score=26.22  Aligned_cols=19  Identities=47%  Similarity=0.943  Sum_probs=10.8

Q ss_pred             eCchhhhhccChhHHHHHH
Q psy14147         30 ACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        30 ~c~~C~~~f~~~~~l~~h~   48 (100)
                      .|..|++.|.....+..|+
T Consensus         2 ~C~~C~~~f~~~~~l~~H~   20 (26)
T smart00355        2 RCPECGKVFKSKSALKEHM   20 (26)
T ss_pred             CCCCCcchhCCHHHHHHHH
Confidence            4555555555555555555

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.21  E-value=0.00053  Score=30.99  Aligned_cols=39  Identities=28%  Similarity=0.665  Sum_probs=29.4

Q ss_pred             CccCccccccccChhHHHHHHHh-cCC-CCCeecCCCccccC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQR-HDN-TPRFKCKLCPKMFT   96 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~-~~~-~~~~~C~~C~~~f~   96 (100)
                      .|.|+.|++.| ....|..|... |.. .+.+.||.|...+.
T Consensus         2 ~f~CP~C~~~~-~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~   42 (54)
T PF05605_consen    2 SFTCPYCGKGF-SESSLVEHCEDEHRSESKNVVCPICSSRVT   42 (54)
T ss_pred             CcCCCCCCCcc-CHHHHHHHHHhHCcCCCCCccCCCchhhhh
Confidence            47899999954 56789999774 444 35789999987654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.06  E-value=0.00054  Score=25.55  Aligned_cols=24  Identities=33%  Similarity=0.629  Sum_probs=20.8

Q ss_pred             ccCccccccccChhHHHHHHHhcC
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      +.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            478999999999999999988664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.00  E-value=0.0012  Score=29.27  Aligned_cols=33  Identities=21%  Similarity=0.435  Sum_probs=22.1

Q ss_pred             cCCCceeCchhhhhccChhHHHHHHhhhcCCCCC
Q psy14147         24 YCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRR   57 (100)
Q Consensus        24 ~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~   57 (100)
                      ..+.|..|++|+..+....+|..|+. ...+.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle-~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLE-IRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHH-HHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHH-HHhcccC
Confidence            45788999999999999999999995 5555543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.95  E-value=0.00046  Score=25.93  Aligned_cols=20  Identities=35%  Similarity=0.750  Sum_probs=10.4

Q ss_pred             eeCchhhhhccChhHHHHHH
Q psy14147         29 YACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~   48 (100)
                      |.|.+|+..|.+...+..|+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHH
Confidence            34555555555555555554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.82  E-value=0.00082  Score=25.21  Aligned_cols=23  Identities=30%  Similarity=0.691  Sum_probs=20.4

Q ss_pred             ccCccccccccChhHHHHHHHhc
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~   80 (100)
                      |.|.+|+..|.....+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999998754

>PRK04860 hypothetical protein; Provisional

Probab=96.75  E-value=0.0012  Score=36.64  Aligned_cols=38  Identities=29%  Similarity=0.746  Sum_probs=31.6

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccCh
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTN   70 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~   70 (100)
                      +|.|. |+.   ...++..|.+ ++.+..+|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~r-i~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNR-VVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHH-HhcCCccEECCCCCceeEEe
Confidence            59998 987   5667889994 99999999999999887543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.34  E-value=0.0026  Score=23.61  Aligned_cols=19  Identities=32%  Similarity=0.621  Sum_probs=8.0

Q ss_pred             eeCchhhhhccChhHHHHHH
Q psy14147         29 YACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~   48 (100)
                      |.|..|+.... ...|..|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~   19 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHL   19 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHH
Confidence            34555554444 44455554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.25  E-value=0.0051  Score=30.87  Aligned_cols=23  Identities=35%  Similarity=0.775  Sum_probs=20.3

Q ss_pred             CceeCchhhhhccChhHHHHHHh
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      ..+.|..|+..|.....|..|++
T Consensus        49 ~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen   49 ESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             CCCCCCccCCCCcCHHHHHHHHc
Confidence            36999999999999999999995

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.11  E-value=0.0019  Score=24.79  Aligned_cols=20  Identities=30%  Similarity=0.717  Sum_probs=14.4

Q ss_pred             eeCchhhhhccChhHHHHHH
Q psy14147         29 YACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~   48 (100)
                      |.|..|++.|.+...+..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            56777777777777776666

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=95.89  E-value=0.0048  Score=24.94  Aligned_cols=8  Identities=25%  Similarity=0.982  Sum_probs=3.7

Q ss_pred             CeecCCCc
Q psy14147         85 RFKCKLCP   92 (100)
Q Consensus        85 ~~~C~~C~   92 (100)
                      ++.|+.||
T Consensus        17 ~~~CP~Cg   24 (33)
T cd00350          17 PWVCPVCG   24 (33)
T ss_pred             CCcCcCCC
Confidence            44444444

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.33  E-value=0.015  Score=23.45  Aligned_cols=21  Identities=24%  Similarity=0.621  Sum_probs=13.2

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +|.|..|+..|.....+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            456666666666666665555

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.20  E-value=0.023  Score=21.40  Aligned_cols=18  Identities=28%  Similarity=0.672  Sum_probs=8.8

Q ss_pred             cCccccccccChhHHHHHH
Q psy14147         59 QCDLCLARFVTNSSLIVHK   77 (100)
Q Consensus        59 ~c~~c~~~~~~~~~l~~h~   77 (100)
                      .|+.|++.| ....|..|.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            355555555 333444444

>KOG1146|consensus

Probab=94.87  E-value=0.027  Score=40.43  Aligned_cols=71  Identities=23%  Similarity=0.409  Sum_probs=48.7

Q ss_pred             HHHHHHHHHhcc-ccccCCCceeCchhhhhccChhHHHHHHhhhcC------------------------CCCCccCccc
Q psy14147          9 MEIQKDVVQSFP-IILYCVKPYACEECGKAFRKKFSLTMHQRHVHL------------------------NDRRYQCDLC   63 (100)
Q Consensus         9 ~~~~~~~l~~h~-~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~------------------------~~~~~~c~~c   63 (100)
                      .+..+..+--|. ..+...+.+.|+.|+..|+....|.-|++..|.                        +.++|.|..|
T Consensus       445 ~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C  524 (1406)
T KOG1146|consen  445 LLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRAC  524 (1406)
T ss_pred             hhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceee
Confidence            333444444443 334455778899999999988888888864332                        2456788888


Q ss_pred             cccccChhHHHHHHHh
Q psy14147         64 LARFVTNSSLIVHKQR   79 (100)
Q Consensus        64 ~~~~~~~~~l~~h~~~   79 (100)
                      ...+.....|..|+..
T Consensus       525 ~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  525 NYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             eeeeecchHHHHHHHH
Confidence            8888888888888763

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.27  E-value=0.044  Score=24.79  Aligned_cols=29  Identities=21%  Similarity=0.308  Sum_probs=23.4

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHh
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      ++..++..+.|+.|+..|....++..|.-
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhh
Confidence            34557778899999999998888888874

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=93.41  E-value=0.082  Score=27.49  Aligned_cols=13  Identities=23%  Similarity=0.488  Sum_probs=7.1

Q ss_pred             CccCccccccccC
Q psy14147         57 RYQCDLCLARFVT   69 (100)
Q Consensus        57 ~~~c~~c~~~~~~   69 (100)
                      |..|+.||..|..
T Consensus        26 PivCP~CG~~~~~   38 (108)
T PF09538_consen   26 PIVCPKCGTEFPP   38 (108)
T ss_pred             CccCCCCCCccCc
Confidence            4456666655543

The function of members of this family is unknown.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=93.25  E-value=0.053  Score=24.89  Aligned_cols=33  Identities=12%  Similarity=0.356  Sum_probs=19.4

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCCCCeecCCCc
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCP   92 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   92 (100)
                      ...|.|+.||...-.+     -.+-..-..+|.|+.||
T Consensus        25 ~v~F~CPnCGe~~I~R-----c~~CRk~g~~Y~Cp~CG   57 (61)
T COG2888          25 AVKFPCPNCGEVEIYR-----CAKCRKLGNPYRCPKCG   57 (61)
T ss_pred             eeEeeCCCCCceeeeh-----hhhHHHcCCceECCCcC
Confidence            3457888888553222     11222234579999887

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=93.24  E-value=0.095  Score=21.69  Aligned_cols=32  Identities=22%  Similarity=0.603  Sum_probs=15.4

Q ss_pred             cCccccccccChhHHHHHHHhcCCCCCeecCCCcccc
Q psy14147         59 QCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMF   95 (100)
Q Consensus        59 ~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   95 (100)
                      .|+.|+..|.-...     +...+.....|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDD-----KLPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHH-----HcccCCcEEECCCCCcEe
Confidence            45556555544322     112233445666666555

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=93.05  E-value=0.056  Score=21.98  Aligned_cols=8  Identities=38%  Similarity=1.219  Sum_probs=4.2

Q ss_pred             eeCchhhh
Q psy14147         29 YACEECGK   36 (100)
Q Consensus        29 ~~c~~C~~   36 (100)
                      |.|..||.
T Consensus         3 ~~C~~CG~   10 (34)
T cd00729           3 WVCPVCGY   10 (34)
T ss_pred             EECCCCCC
Confidence            45555553

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.55  E-value=0.022  Score=35.70  Aligned_cols=63  Identities=29%  Similarity=0.469  Sum_probs=46.1

Q ss_pred             CceeCchhhhhccChhHHHHHHhh-hcCCC--CCccCc--cccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRH-VHLND--RRYQCD--LCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~-~~~~~--~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      .++.|..|...|.....+..|.+. .|.++  .++.|+  .|++.|.....+..|...|.+..++.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            356777788888888888888732 57777  788887  6888888877777777777776665553

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=92.39  E-value=0.15  Score=20.97  Aligned_cols=32  Identities=19%  Similarity=0.572  Sum_probs=15.7

Q ss_pred             cCccccccccChhHHHHHHHhcCCCCCeecCCCcccc
Q psy14147         59 QCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMF   95 (100)
Q Consensus        59 ~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   95 (100)
                      .|+.|+..|.-....     ........+|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            455566555443221     22333445666666655

>KOG2893|consensus

Probab=92.38  E-value=0.03  Score=33.08  Aligned_cols=42  Identities=24%  Similarity=0.674  Sum_probs=28.0

Q ss_pred             eCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHH
Q psy14147         30 ACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVH   76 (100)
Q Consensus        30 ~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h   76 (100)
                      .|..|.+.|....-|+.|++     .+-|.|-+|.+.+.+-..|..|
T Consensus        12 wcwycnrefddekiliqhqk-----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK-----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhh-----hccceeeeehhhhccCCCceee
Confidence            47788888888888887774     3456788887654443334444

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=92.23  E-value=0.13  Score=21.23  Aligned_cols=11  Identities=18%  Similarity=0.893  Sum_probs=6.4

Q ss_pred             CeecCCCcccc
Q psy14147         85 RFKCKLCPKMF   95 (100)
Q Consensus        85 ~~~C~~C~~~f   95 (100)
                      ...|+.|+..|
T Consensus        25 ~v~C~~C~~~~   35 (38)
T TIGR02098        25 KVRCGKCGHVW   35 (38)
T ss_pred             EEECCCCCCEE
Confidence            35566666555

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.23  E-value=0.14  Score=26.77  Aligned_cols=66  Identities=21%  Similarity=0.444  Sum_probs=36.0

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcC-CCCCc------------cCccccccccChhHHHHHHHhcCCCCCeecCCCcc
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHL-NDRRY------------QCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPK   93 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~-~~~~~------------~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   93 (100)
                      -|..|++|+-+......|.+..  .|. .-++|            .|-.|...|........  ..-.....|.|+.|..
T Consensus        14 LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~   89 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKN   89 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCC
Confidence            4677888888877777776554  121 11112            26667766654321110  0012234688888887


Q ss_pred             ccC
Q psy14147         94 MFT   96 (100)
Q Consensus        94 ~f~   96 (100)
                      .|-
T Consensus        90 ~FC   92 (112)
T TIGR00622        90 VFC   92 (112)
T ss_pred             ccc
Confidence            763

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=92.13  E-value=0.09  Score=29.44  Aligned_cols=10  Identities=20%  Similarity=0.591  Sum_probs=4.7

Q ss_pred             CCCccCcccc
Q psy14147         55 DRRYQCDLCL   64 (100)
Q Consensus        55 ~~~~~c~~c~   64 (100)
                      +.|..||+|+
T Consensus       147 e~P~~CPiCg  156 (166)
T COG1592         147 EAPEVCPICG  156 (166)
T ss_pred             CCCCcCCCCC
Confidence            3444455554

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=91.92  E-value=0.025  Score=31.24  Aligned_cols=11  Identities=36%  Similarity=0.745  Sum_probs=5.4

Q ss_pred             ccCcccccccc
Q psy14147         58 YQCDLCLARFV   68 (100)
Q Consensus        58 ~~c~~c~~~~~   68 (100)
                      ++|+.||++|.
T Consensus        29 ~~c~~c~~~f~   39 (154)
T PRK00464         29 RECLACGKRFT   39 (154)
T ss_pred             eeccccCCcce
Confidence            44555555443

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=91.30  E-value=0.099  Score=19.54  Aligned_cols=10  Identities=30%  Similarity=0.607  Sum_probs=6.7

Q ss_pred             CCeecCCCcc
Q psy14147         84 PRFKCKLCPK   93 (100)
Q Consensus        84 ~~~~C~~C~~   93 (100)
                      .+|.|+.||+
T Consensus        15 v~f~CPnCG~   24 (24)
T PF07754_consen   15 VPFPCPNCGF   24 (24)
T ss_pred             ceEeCCCCCC
Confidence            4577777763

It is likely to bind zinc via its four well-conserved cysteine residues.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.48  E-value=0.028  Score=32.72  Aligned_cols=22  Identities=32%  Similarity=0.532  Sum_probs=15.8

Q ss_pred             CCceeCchhhhhccChhHHHHH
Q psy14147         26 VKPYACEECGKAFRKKFSLTMH   47 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h   47 (100)
                      .+...|++|++.|.........
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~   24 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGK   24 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCC
Confidence            3567899999999877544333

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=90.08  E-value=0.24  Score=21.37  Aligned_cols=10  Identities=50%  Similarity=1.298  Sum_probs=5.6

Q ss_pred             eeCchhhhhc
Q psy14147         29 YACEECGKAF   38 (100)
Q Consensus        29 ~~c~~C~~~f   38 (100)
                      |.|..||..|
T Consensus         3 Y~C~~Cg~~~   12 (44)
T smart00659        3 YICGECGREN   12 (44)
T ss_pred             EECCCCCCEe
Confidence            5566666554

present in RNA polymerase I, II and III

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=89.95  E-value=0.54  Score=26.15  Aligned_cols=12  Identities=25%  Similarity=0.478  Sum_probs=5.4

Q ss_pred             CccCcccccccc
Q psy14147         57 RYQCDLCLARFV   68 (100)
Q Consensus        57 ~~~c~~c~~~~~   68 (100)
                      -|.|+.|+..|+
T Consensus       109 ~Y~Cp~c~~r~t  120 (158)
T TIGR00373       109 FFICPNMCVRFT  120 (158)
T ss_pred             eEECCCCCcEee
Confidence            344544444443

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG2186|consensus

Probab=89.50  E-value=0.26  Score=29.44  Aligned_cols=52  Identities=21%  Similarity=0.395  Sum_probs=37.4

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      .|.|..||.+..-. .+..|+. ..++ .-|.|..|+..|.. .....|..--++.
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~s-rCrn-~~fSCIDC~k~F~~-~sYknH~kCITEa   54 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMS-RCRN-AYFSCIDCGKTFER-VSYKNHTKCITEA   54 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHH-hccC-CeeEEeeccccccc-chhhhhhhhcchH
Confidence            47899999877644 4667884 5555 57899999999987 4566676644433

>PF15135 UPF0515: Uncharacterised protein UPF0515

Probab=89.39  E-value=0.38  Score=28.75  Aligned_cols=57  Identities=23%  Similarity=0.562  Sum_probs=30.7

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFT   96 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   96 (100)
                      ...|.|..|...+        ..+ .-.......|..|.+.|.-...   ....  |---|.|+.|+..|.
T Consensus       110 drqFaC~~Cd~~W--------wRr-vp~rKeVSRCr~C~~rYDPVP~---dkmw--G~aef~C~~C~h~F~  166 (278)
T PF15135_consen  110 DRQFACSSCDHMW--------WRR-VPQRKEVSRCRKCRKRYDPVPC---DKMW--GIAEFHCPKCRHNFR  166 (278)
T ss_pred             ceeeeccccchHH--------Hhc-cCcccccccccccccccCCCcc---cccc--ceeeeecccccccch
Confidence            3679999996543        121 2222234467777766644321   1111  122378888888775

>smart00531 TFIIE Transcription initiation factor IIE

Probab=89.37  E-value=0.76  Score=25.21  Aligned_cols=13  Identities=23%  Similarity=0.858  Sum_probs=7.5

Q ss_pred             CCccCcccccccc
Q psy14147         56 RRYQCDLCLARFV   68 (100)
Q Consensus        56 ~~~~c~~c~~~~~   68 (100)
                      .-|.|+.|+..|.
T Consensus        98 ~~Y~Cp~C~~~y~  110 (147)
T smart00531       98 AYYKCPNCQSKYT  110 (147)
T ss_pred             cEEECcCCCCEee
Confidence            3456666665554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.00  E-value=0.18  Score=31.60  Aligned_cols=44  Identities=27%  Similarity=0.532  Sum_probs=38.6

Q ss_pred             CCccCccccccccChhHHHHHHH--hcCCC--CCeecC--CCccccCCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQ--RHDNT--PRFKCK--LCPKMFTNTV   99 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~--~~~~~--~~~~C~--~C~~~f~~~~   99 (100)
                      .++.|..|...|.....+..|.+  .|+++  +|+.|+  .|++.|....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~  337 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRND  337 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccc
Confidence            35788889999999999999999  79999  999999  7999998653

>PRK09678 DNA-binding transcriptional regulator; Provisional

Probab=88.91  E-value=0.084  Score=25.38  Aligned_cols=9  Identities=33%  Similarity=0.689  Sum_probs=4.3

Q ss_pred             eCchhhhhc
Q psy14147         30 ACEECGKAF   38 (100)
Q Consensus        30 ~c~~C~~~f   38 (100)
                      .|+.|+...
T Consensus         3 ~CP~Cg~~a   11 (72)
T PRK09678          3 HCPLCQHAA   11 (72)
T ss_pred             cCCCCCCcc
Confidence            455555433

>KOG4173|consensus

Probab=88.44  E-value=0.63  Score=27.12  Aligned_cols=70  Identities=23%  Similarity=0.240  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhc---------CCCCCccCcc--ccccccChhHHH
Q psy14147          6 REVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVH---------LNDRRYQCDL--CLARFVTNSSLI   74 (100)
Q Consensus         6 ~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~---------~~~~~~~c~~--c~~~~~~~~~l~   74 (100)
                      +-.+|...+....|..+.++   ..|..|.+.|++..-|..|+...|         .|...|+|-+  |+-.|.....-.
T Consensus        87 c~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~Rk  163 (253)
T KOG4173|consen   87 CCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRK  163 (253)
T ss_pred             hHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhh
Confidence            34556666666667654443   248888888888888877774222         2344567743  776676666555


Q ss_pred             HHHH
Q psy14147         75 VHKQ   78 (100)
Q Consensus        75 ~h~~   78 (100)
                      .|+-
T Consensus       164 dH~I  167 (253)
T KOG4173|consen  164 DHMI  167 (253)
T ss_pred             hHHH
Confidence            5543

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=88.32  E-value=0.88  Score=25.88  Aligned_cols=16  Identities=19%  Similarity=0.390  Sum_probs=9.1

Q ss_pred             CCceeCchhhhhccCh
Q psy14147         26 VKPYACEECGKAFRKK   41 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~   41 (100)
                      ..-|.|+.|+..|+..
T Consensus       115 ~~~Y~Cp~C~~rytf~  130 (178)
T PRK06266        115 NMFFFCPNCHIRFTFD  130 (178)
T ss_pred             CCEEECCCCCcEEeHH
Confidence            3456666666655543

>KOG2186|consensus

Probab=88.26  E-value=0.36  Score=28.88  Aligned_cols=43  Identities=23%  Similarity=0.455  Sum_probs=27.5

Q ss_pred             HHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCc
Q psy14147         13 KDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRY   58 (100)
Q Consensus        13 ~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~   58 (100)
                      +-.+..|+-...+ .-|.|..|++.|.. .++..|.. .-+....|
T Consensus        15 Kp~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k-CITEaQKY   57 (276)
T KOG2186|consen   15 KPQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK-CITEAQKY   57 (276)
T ss_pred             ccchHHHHHhccC-CeeEEeeccccccc-chhhhhhh-hcchHHHh
Confidence            3456667655444 66899999999988 55667763 44433333

>KOG2893|consensus

Probab=88.15  E-value=0.08  Score=31.34  Aligned_cols=44  Identities=18%  Similarity=0.239  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcC
Q psy14147          6 REVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHL   53 (100)
Q Consensus         6 ~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   53 (100)
                      |+..|..+..|.+|++.    |-|+|.+|.+..-+--.|..|-.++|.
T Consensus        16 cnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   16 CNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             cccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhh
Confidence            56678899999999864    558999999877666666666545554

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=87.81  E-value=0.47  Score=25.40  Aligned_cols=30  Identities=23%  Similarity=0.341  Sum_probs=18.0

Q ss_pred             eeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccCh
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTN   70 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~   70 (100)
                      ..|..||+.|-.            .+..|..|+.||..|...
T Consensus        10 r~Cp~cg~kFYD------------Lnk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYD------------LNRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCccccc------------cCCCCccCCCcCCccCcc
Confidence            567777776621            122466777787766444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PF14353 CpXC: CpXC protein

Probab=87.28  E-value=0.72  Score=24.54  Aligned_cols=8  Identities=50%  Similarity=1.543  Sum_probs=4.1

Q ss_pred             Cchhhhhc
Q psy14147         31 CEECGKAF   38 (100)
Q Consensus        31 c~~C~~~f   38 (100)
                      |+.|+..|
T Consensus         4 CP~C~~~~   11 (128)
T PF14353_consen    4 CPHCGHEF   11 (128)
T ss_pred             CCCCCCee
Confidence            55555444

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=87.08  E-value=0.24  Score=22.76  Aligned_cols=34  Identities=12%  Similarity=0.343  Sum_probs=19.1

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCCCCeecCCCcc
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPK   93 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   93 (100)
                      ...|.|+.||...-.+-  ..   -..-..+|.|+.||-
T Consensus        23 ~~~F~CPnCG~~~I~RC--~~---CRk~~~~Y~CP~CGF   56 (59)
T PRK14890         23 AVKFLCPNCGEVIIYRC--EK---CRKQSNPYTCPKCGF   56 (59)
T ss_pred             cCEeeCCCCCCeeEeec--hh---HHhcCCceECCCCCC
Confidence            34678888886522221  11   112245789998883

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=86.84  E-value=0.35  Score=18.38  Aligned_cols=10  Identities=30%  Similarity=0.580  Sum_probs=6.3

Q ss_pred             ecCCCccccC
Q psy14147         87 KCKLCPKMFT   96 (100)
Q Consensus        87 ~C~~C~~~f~   96 (100)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            4666776664

Several members are annotated as putative helicases.

>KOG1146|consensus

Probab=86.80  E-value=0.59  Score=34.26  Aligned_cols=48  Identities=15%  Similarity=0.143  Sum_probs=40.4

Q ss_pred             ccchHHHHHHHHHHHHhccccc-------------------------cCCCceeCchhhhhccChhHHHHHHh
Q psy14147          2 VVRSREVMEIQKDVVQSFPIIL-------------------------YCVKPYACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus         2 ~~~~~~~~~~~~~~l~~h~~~~-------------------------~~~~~~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      +++.++.+|.....|..|+|.-                         .+.++|.|..|..++....+|..|+.
T Consensus       467 ~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  467 KCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             cCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            4788999999999999999871                         11377999999999999899988884

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=86.48  E-value=0.36  Score=20.05  Aligned_cols=11  Identities=27%  Similarity=1.008  Sum_probs=8.6

Q ss_pred             eecCCCccccC
Q psy14147         86 FKCKLCPKMFT   96 (100)
Q Consensus        86 ~~C~~C~~~f~   96 (100)
                      |.|+.||..|.
T Consensus         6 y~C~~Cg~~fe   16 (41)
T smart00834        6 YRCEDCGHTFE   16 (41)
T ss_pred             EEcCCCCCEEE
Confidence            67888888774

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF13451 zf-trcl: Probable zinc-binding domain

Probab=85.66  E-value=0.62  Score=20.65  Aligned_cols=36  Identities=19%  Similarity=0.425  Sum_probs=21.0

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCC--CCCccCcccc
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLN--DRRYQCDLCL   64 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~--~~~~~c~~c~   64 (100)
                      +.+.|..||..|...+.-+.... . .|  ..|-.|+.|.
T Consensus         3 k~l~C~dCg~~FvfTa~EQ~fy~-e-Kgf~n~p~RC~~CR   40 (49)
T PF13451_consen    3 KTLTCKDCGAEFVFTAGEQKFYA-E-KGFDNEPKRCPSCR   40 (49)
T ss_pred             eeEEcccCCCeEEEehhHHHHHH-h-cCCcCCCccCHHHH
Confidence            56778888888776665444442 2 22  2355666664

>PHA00626 hypothetical protein

Probab=85.40  E-value=0.58  Score=21.29  Aligned_cols=15  Identities=13%  Similarity=0.268  Sum_probs=10.9

Q ss_pred             CCCeecCCCccccCC
Q psy14147         83 TPRFKCKLCPKMFTN   97 (100)
Q Consensus        83 ~~~~~C~~C~~~f~~   97 (100)
                      ...|.|+.||..|+.
T Consensus        21 snrYkCkdCGY~ft~   35 (59)
T PHA00626         21 SDDYVCCDCGYNDSK   35 (59)
T ss_pred             CcceEcCCCCCeech
Confidence            346888888877763

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=84.97  E-value=0.46  Score=20.18  Aligned_cols=11  Identities=27%  Similarity=1.002  Sum_probs=8.5

Q ss_pred             eecCCCccccC
Q psy14147         86 FKCKLCPKMFT   96 (100)
Q Consensus        86 ~~C~~C~~~f~   96 (100)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (42)
T PF09723_consen    6 YRCEECGHEFE   16 (42)
T ss_pred             EEeCCCCCEEE
Confidence            77888887774

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=84.93  E-value=0.4  Score=23.87  Aligned_cols=12  Identities=33%  Similarity=0.894  Sum_probs=6.7

Q ss_pred             CeecCCCccccC
Q psy14147         85 RFKCKLCPKMFT   96 (100)
Q Consensus        85 ~~~C~~C~~~f~   96 (100)
                      .+.|..||..|.
T Consensus        53 IW~C~kCg~~fA   64 (89)
T COG1997          53 IWKCRKCGAKFA   64 (89)
T ss_pred             eEEcCCCCCeec
Confidence            356666665553

>PLN02294 cytochrome c oxidase subunit Vb

Probab=83.58  E-value=0.64  Score=26.19  Aligned_cols=14  Identities=29%  Similarity=0.923  Sum_probs=12.2

Q ss_pred             CCCeecCCCccccC
Q psy14147         83 TPRFKCKLCPKMFT   96 (100)
Q Consensus        83 ~~~~~C~~C~~~f~   96 (100)
                      .+|..|++||..|.
T Consensus       139 Gkp~RCpeCG~~fk  152 (174)
T PLN02294        139 GKSFECPVCTQYFE  152 (174)
T ss_pred             CCceeCCCCCCEEE
Confidence            47999999999986

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=83.15  E-value=1.3  Score=16.74  Aligned_cols=19  Identities=21%  Similarity=0.567  Sum_probs=11.4

Q ss_pred             cCccccccccChhHHHHHHH
Q psy14147         59 QCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        59 ~c~~c~~~~~~~~~l~~h~~   78 (100)
                      .|++|++.+ ....+..|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            477777766 4455666654

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF12760 Zn_Tnp_IS1595: Transposase zinc-ribbon domain; InterPro: IPR024442 This zinc binding domain is found in a range of transposase proteins such as ISSPO8, ISSOD11, ISRSSP2 etc

Probab=83.08  E-value=1.2  Score=19.28  Aligned_cols=29  Identities=28%  Similarity=0.706  Sum_probs=15.7

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCCCeecCCCcc
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPK   93 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   93 (100)
                      ..+.|+.|+..  ....+       .+...|.|..|++
T Consensus        17 ~g~~CP~Cg~~--~~~~~-------~~~~~~~C~~C~~   45 (46)
T PF12760_consen   17 DGFVCPHCGST--KHYRL-------KTRGRYRCKACRK   45 (46)
T ss_pred             CCCCCCCCCCe--eeEEe-------CCCCeEECCCCCC
Confidence            34668888753  11111       1145678887765

It may be a zinc-binding beta ribbon domain that could bind DNA.

>KOG3408|consensus

Probab=82.94  E-value=0.92  Score=24.08  Aligned_cols=27  Identities=19%  Similarity=0.394  Sum_probs=21.5

Q ss_pred             CCCCCccCccccccccChhHHHHHHHh
Q psy14147         53 LNDRRYQCDLCLARFVTNSSLIVHKQR   79 (100)
Q Consensus        53 ~~~~~~~c~~c~~~~~~~~~l~~h~~~   79 (100)
                      .|...|.|..|.+-|.....|..|.++
T Consensus        53 PG~GqfyCi~CaRyFi~~~~l~~H~kt   79 (129)
T KOG3408|consen   53 PGGGQFYCIECARYFIDAKALKTHFKT   79 (129)
T ss_pred             CCCceeehhhhhhhhcchHHHHHHHhc
Confidence            455568888899989888888888774

>smart00154 ZnF_AN1 AN1-like Zinc finger

Probab=82.76  E-value=0.75  Score=19.25  Aligned_cols=12  Identities=42%  Similarity=1.151  Sum_probs=9.6

Q ss_pred             CeecCCCccccC
Q psy14147         85 RFKCKLCPKMFT   96 (100)
Q Consensus        85 ~~~C~~C~~~f~   96 (100)
                      |+.|..|++.|=
T Consensus        12 ~f~C~~C~~~FC   23 (39)
T smart00154       12 GFKCRHCGNLFC   23 (39)
T ss_pred             CeECCccCCccc
Confidence            788888888773

Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis.

>PF12907 zf-met2: Zinc-binding

Probab=82.60  E-value=0.65  Score=19.65  Aligned_cols=24  Identities=25%  Similarity=0.531  Sum_probs=12.5

Q ss_pred             eeCchhhhhccCh---hHHHHHHhhhc
Q psy14147         29 YACEECGKAFRKK---FSLTMHQRHVH   52 (100)
Q Consensus        29 ~~c~~C~~~f~~~---~~l~~h~~~~~   52 (100)
                      +.|.+|..+|...   ..|..|....|
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKH   28 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKH   28 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccC
Confidence            3566676555433   33666654333

>PRK03824 hypA hydrogenase nickel incorporation protein; Provisional

Probab=82.22  E-value=0.43  Score=25.85  Aligned_cols=13  Identities=15%  Similarity=0.416  Sum_probs=7.8

Q ss_pred             CccCccccccccC
Q psy14147         57 RYQCDLCLARFVT   69 (100)
Q Consensus        57 ~~~c~~c~~~~~~   69 (100)
                      .+.|..|+..|..
T Consensus        70 ~~~C~~CG~~~~~   82 (135)
T PRK03824         70 VLKCRNCGNEWSL   82 (135)
T ss_pred             EEECCCCCCEEec
Confidence            4567777765543

>cd00924 Cyt_c_Oxidase_Vb Cytochrome c oxidase subunit Vb

Probab=81.52  E-value=0.86  Score=23.30  Aligned_cols=17  Identities=18%  Similarity=0.477  Sum_probs=13.7

Q ss_pred             hcCCCCCeecCCCccccC
Q psy14147         79 RHDNTPRFKCKLCPKMFT   96 (100)
Q Consensus        79 ~~~~~~~~~C~~C~~~f~   96 (100)
                      .+.+ +|..|++||..|.
T Consensus        74 l~~g-~~~rC~eCG~~fk   90 (97)
T cd00924          74 LEKG-KPKRCPECGHVFK   90 (97)
T ss_pred             EeCC-CceeCCCCCcEEE
Confidence            4555 7999999999885

Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit Vb is one of three mammalian subunits that lacks a transmembrane region. Subunit Vb is located on the matrix side of the membrane and binds the regulatory subunit of protein kinase A. The abnormally extended conformation is stable only in the CcO assembly.

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=81.52  E-value=0.86  Score=20.20  Aligned_cols=11  Identities=36%  Similarity=1.201  Sum_probs=7.1

Q ss_pred             ceeCchhhhhc
Q psy14147         28 PYACEECGKAF   38 (100)
Q Consensus        28 ~~~c~~C~~~f   38 (100)
                      .|.|..||+.+
T Consensus         6 ~Y~C~~Cg~~~   16 (49)
T COG1996           6 EYKCARCGREV   16 (49)
T ss_pred             EEEhhhcCCee
Confidence            36677777665

>KOG2785|consensus

Probab=81.36  E-value=2.3  Score=27.19  Aligned_cols=51  Identities=18%  Similarity=0.249  Sum_probs=38.8

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCC-----------------------CCCccCcccc---ccccChhHHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLN-----------------------DRRYQCDLCL---ARFVTNSSLIVHKQ   78 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~-----------------------~~~~~c~~c~---~~~~~~~~l~~h~~   78 (100)
                      .|-.|..|++.+........||. .+.|                       ...+.|..|+   +.|.+......|+.
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~-~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMF-KEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHh-hccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            45679999999998888889995 4433                       2346788888   88888888888876

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=81.07  E-value=0.8  Score=20.20  Aligned_cols=11  Identities=27%  Similarity=1.026  Sum_probs=8.0

Q ss_pred             eecCCCccccC
Q psy14147         86 FKCKLCPKMFT   96 (100)
Q Consensus        86 ~~C~~C~~~f~   96 (100)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (52)
T TIGR02605         6 YRCTACGHRFE   16 (52)
T ss_pred             EEeCCCCCEeE
Confidence            67888887664

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	100
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-09
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-09
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		6e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-04
2ysp_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2elz_A	46	Solution Structure Of The 17th Zf-C2h2 Domain From		3e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		5e-04
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		7e-04
2en4_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
          KPY C ECGK+F +  +L  HQR  H  ++ Y+C  C   F  +S L  H++ H     +
Sbjct: 3  KPYKCPECGKSFSQSSNLQKHQR-THTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 87 KCKLCPKMFTNT 98
          KC  C K F+ +
Sbjct: 62 KCPECGKSFSRS 73

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
          KPYAC ECGK+F +   L  HQR  H  ++ Y+C  C   F     L  H++ H     +
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78
Query: 87 KCKLCPKMFT 96
          KC  C K F+
Sbjct: 79 KCPECGKSFS 88

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          KPY C ECGKAF +   L  HQR VH  ++ Y+C  C   F  NS LI H++ H + P
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
          K + C+ CG+ F K ++L +H+R  H ++R Y CD+C   F     L  H+  H     F
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 87 KCKLCPKMF 95
          KC+ C K F
Sbjct: 75 KCQECGKGF 83

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +  SLT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 85 RFKCKLCPKMFTNT 98
           F C +C + F  +
Sbjct: 62 PFACDICGRKFARS 75

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +K +L  H R +H   + +QC +C+  F   +SL  H + H    
Sbjct: 3  RPYACPVESCDRRFSQKTNLDTHIR-IHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 85 RFKCKLCPKMF 95
           F C +C + F
Sbjct: 62 PFACDICGRKF 72

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 28 PYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFK 87
          P+ CE CGK F +K  L  H R  H   + Y+C  C      +SSL  H + H +   FK
Sbjct: 8  PHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66
Query: 88 CKLCPKMFTNT 98
          C++CP    N+
Sbjct: 67 CQICPYASRNS 77

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 29 YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT 83
          Y C+ECGK+F     L+ H+R  H  ++ Y+CD C   F+  S LI H + H  +
Sbjct: 19 YKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +   LT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 3  RPYACPVESCDRRFSRSADLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 85 RFKCKLCPKMFTNT 98
           F C +C + F  +
Sbjct: 62 PFACDICGRKFARS 75

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +   LT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 3  RPYACPVESCDRRFSRSAELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 85 RFKCKLCPKMFTNT 98
           F C +C + F  +
Sbjct: 62 PFACDICGRKFARS 75

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +   LT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 2  RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 85 RFKCKLCPKMFTNT 98
           F C +C + F  +
Sbjct: 61 PFACDICGRKFARS 74

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +   LT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 85 RFKCKLCPKMFTNT 98
           F C +C + F  +
Sbjct: 62 PFACDICGRKFARS 75

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +   LT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 85 RFKCKLCPKMFTNT 98
           F C +C + F  +
Sbjct: 62 PFACDICGRKFARS 75

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +K +L  H R +H   + +QC +C+  F  ++ L  H + H    
Sbjct: 3  RPYACPVESCDRRFSQKTNLDTHIR-IHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 85 RFKCKLCPKMF 95
           F C +C + F
Sbjct: 62 PFACDICGRKF 72

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F    +LT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 3  RPYACPVESCDRRFSDSSNLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 85 RFKCKLCPKMFTNT 98
           F C +C + F  +
Sbjct: 62 PFACDICGRKFARS 75

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN 82
          KPY C+ C  +FR K +L  H+  VH  ++ Y+C++C A+F   ++L  H + H  
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN 82
           +PY C+ CGK F +K  +  H   +H  ++ ++C +C   F  +S+LI H ++H  
Sbjct: 27 TRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 27 KPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDN 82
          +P+ C    C K + K   L MH R  H  ++ YQCD   C  RF  +  L  H++RH  
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 83 TPRFKCKLCPKMFTNT 98
             F+CK C + F+ +
Sbjct: 64 VKPFQCKTCQRKFSRS 79

>pdb|2YSP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 507- 539) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDR 56
          KPY CE+CGK +  KF+L MHQ+ VH  +R
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQK-VHTGER 39

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVH 76
          ++PY C  CGK F+ K  L  H + +H   + Y+C++C  RF+   S   H
Sbjct: 35 LRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSFHRH 84

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 30 ACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT--PRFK 87
          ACE CGK FR  + L  H+   H  ++ Y C +C  RF     +  H + HD +    + 
Sbjct: 9  ACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 88 CKLCPKMFT 96
          C+ C K F+
Sbjct: 68 CQSCGKGFS 76

>pdb|2ELZ|A Chain A, Solution Structure Of The 17th Zf-C2h2 Domain From Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDR 56
          KPY CE+CGK + ++ +L MHQR VH+ ++
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQR-VHMGEK 39

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDR 56
          KPY C ECGKAF +K +LT HQR +H  ++
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQR-IHTGEK 39

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDR 56
          VKPY C ECGKAFR K  L +H R  H  ++
Sbjct: 8  VKPYGCSECGKAFRSKSYLIIHMR-THTGEK 37

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 32  EEC---GKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNTPRF 86
           EEC   GK+F+ K+ L  H R VH  ++ + C    C   F  + +L +HK+ H     F
Sbjct: 63  EECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121
Query: 87  KCKL--CPKMFTNT 98
           KC+   C + F N+
Sbjct: 122 KCEFEGCDRRFANS 135

>pdb|2EN4|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 284- 316) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRR 57
          KPY C ECGKAFR + +LT HQ  +H  ++R
Sbjct: 11 KPYKCYECGKAFRTRSNLTTHQV-IHTGEKR 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	100
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-16
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-14
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-05
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	3e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	6e-04
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 65.9 bits (162), Expect = 6e-16
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           P+ CE CGK F +K  L  H R  H   + Y+C  C      +SSL  H + H +   F
Sbjct: 7  GPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65

Query: 87 KCKLCPKMFTN 97
          KC++CP    N
Sbjct: 66 KCQICPYASRN 76

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.7 bits (146), Expect = 2e-13
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          KPY C+ C  A     SL  H R +H ++R ++C +C      +S L VH + H
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 49.0 bits (118), Expect = 3e-09
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          +P+ C+ C  A R    LT+H R  H  D     
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLR-SHTGDSGPSS 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 65.1 bits (160), Expect = 1e-15
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
          K + C+ CG+ F K ++L +H+R  H ++R Y CD+C   F     L  H+  H     F
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74

Query: 87 KCKLCPKMFT 96
          KC+ C K F 
Sbjct: 75 KCQECGKGFC 84

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.0 bits (144), Expect = 4e-13
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          +PY C+ C KAFR++  L  H+  +H  ++ ++C  C   F  + +L VHK  H
Sbjct: 44 RPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 47.8 bits (115), Expect = 9e-09
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
           KP+ C+ECGK F +  +L +H+  +H+       
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKT-LHMQTSSPTA 104

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 63.7 bits (156), Expect = 4e-15
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR- 85
             ACE CGK FR  + L  H+   H  ++ Y C +C  RF     +  H + HD +   
Sbjct: 6  SGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 86 -FKCKLCPKMFT 96
           + C+ C K F+
Sbjct: 65 PYICQSCGKGFS 76

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 57.5 bits (140), Expect = 1e-12
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR-HVHLNDRRYQCDLCLARFVTNSSLIVHKQR 79
          KPY+C  CG  F++K  ++ H R H     + Y C  C   F     L  H ++
Sbjct: 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVH 52
          KPY C+ CGK F +   L  H + VH
Sbjct: 64 KPYICQSCGKGFSRPDHLNGHIKQVH 89

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 62.9 bits (154), Expect = 7e-15
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPR 85
          +KP+ C  C + F +   LT H R  H  ++ + CD+C  +F  +     H+      P 
Sbjct: 1  MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHILP- 58

Query: 86 FKCKLCPKMFT 96
                 ++ +
Sbjct: 59 ILEDKVEELLS 69

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          KP+AC+ CG+ F +      H+  +  +      D        N  L     R 
Sbjct: 30 KPFACDICGRKFARSDERKRHRD-IQ-HILPILEDKVEELLSKNYHLENEVARL 81

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 62.1 bits (152), Expect = 9e-15
 Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          KPY C ECGKAF +   L  HQR VH  ++ Y+C  C   F  NS LI H++ H
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 62.9 bits (154), Expect = 1e-14
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT--- 83
              C  C K F  K+ L +H R  H  ++ ++C  C   +    +L+ H +  +     
Sbjct: 6  SGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEH-EARNCMNRS 63

Query: 84 --PRFKCKLCPKMFT 96
              F C +C + F 
Sbjct: 64 EQV-FTCSVCQETFR 77

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.0 bits (149), Expect = 8e-14
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRH--VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
           KP+ C +CGK + +K +L  H+    ++ +++ + C +C   F     L +H   H    
Sbjct: 34  KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEM 93

Query: 85  RFKCKLCPKMFT 96
            +KC  C + F 
Sbjct: 94  PYKCSSCSQQFM 105

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.9 bits (141), Expect = 2e-12
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQR 79
           + + C  C + FR++  L +H    H  +  Y+C  C  +F+    L  H  +
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVH 52
            PY C  C + F +K  L  H   +H
Sbjct: 93  MPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.7 bits (150), Expect = 2e-14
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR-H-VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
              CE CG   R+K SL  HQR H   +   R+ C+ C  RF    S+  H+ +     
Sbjct: 6  SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 85 RFKCKLCPK 93
              +    
Sbjct: 66 LLAPQESSG 74

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 60.6 bits (148), Expect = 6e-14
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 5/73 (6%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVH----LNDRRYQCDLCLARFVTNSSLIVHKQRHDN 82
          KPYAC  C K FR+K  L MH +  +         + C  C   F   +++  H      
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG 72

Query: 83 TPRFKCKLCPKMF 95
              + +      
Sbjct: 73 PDGVEGENSGPSS 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 59.8 bits (146), Expect = 8e-14
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
           P  C EC  +   K +L +H+R +H  DR ++C+ C       S+L  H ++ 
Sbjct: 8  HPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 62.1 bits (152), Expect = 1e-13
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPY C ECGK+F ++ +L  HQR  H  ++ Y C  C   F   + L  H++ H     +
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPY 134

Query: 87  KCKLCPKMFT 96
           KC  C K F+
Sbjct: 135 KCPECGKSFS 144

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 62.1 bits (152), Expect = 1e-13
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           KPYAC ECGK+F +   L  HQR  H  ++ Y+C  C   F    +L  H++ H     +
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY 162

Query: 87  KCKLCPKMFT 96
           KC  C K F+
Sbjct: 163 KCPECGKSFS 172

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 62.1 bits (152), Expect = 1e-13
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 7/73 (9%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT--- 83
          KPYAC ECGK+F +   L  HQR  H  ++ Y+C  C   F     L  H++ H  T   
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTH--TGEK 76

Query: 84 PRFKCKLCPKMFT 96
          P +KC  C K F+
Sbjct: 77 P-YKCPECGKSFS 88

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 57.1 bits (139), Expect = 1e-11
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
           KPY C ECGK+F ++ +L  HQR  H  ++ Y+C  C   F    +L VH++ H
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQR-THTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 35.5 bits (83), Expect = 8e-04
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 37 AFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFT 96
          +     S       +   ++ Y C  C   F  +  L  H++ H     +KC  C K F+
Sbjct: 2  SEFGSSSSVAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.1 bits (147), Expect = 1e-13
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
           +PY C  CGK F+ K  L  H + +H   + Y+C++C  RF+   S   H+     T  +
Sbjct: 36  RPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSY 92

Query: 87  KCKLCPKMFT 96
           +     +  T
Sbjct: 93  EAAKAEQNTT 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.1 bits (147), Expect = 2e-13
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
          K Y C+ CGK+F  K     H   +HL  R Y C +C  +F     L+ H + H     +
Sbjct: 9  KLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY 66

Query: 87 KCKLCPKMFT 96
          +C +C K F 
Sbjct: 67 ECNICAKRFM 76

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 35.1 bits (82), Expect = 6e-04
 Identities = 2/19 (10%), Positives = 6/19 (31%)

Query: 27  KPYACEECGKAFRKKFSLT 45
           K Y   +  +   +    +
Sbjct: 90  KSYEAAKAEQNTTEASGPS 108

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 58.7 bits (143), Expect = 1e-13
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQR 79
          + + CE C +AF ++  L  H R  H N++ Y C LC   F     LI H Q+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.5 bits (96), Expect = 2e-06
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVH 52
          KPY C  C +AF ++  L  H + +H
Sbjct: 29 KPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.0 bits (144), Expect = 2e-13
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          KPY C+ C  +FR K +L  H+  VH  ++ Y+C++C A+F   ++L  H + H
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.0 bits (144), Expect = 2e-13
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          + Y C+ECGK+F     L+ H+R  H  ++ Y+CD C   F+  S LI H + H
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 59.0 bits (144), Expect = 2e-13
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          +PY C+ CGK F +K  +  H   +H  ++ ++C +C   F  +S+LI H ++H
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.4 bits (140), Expect = 1e-12
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 29 YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC 88
          + C+ CGK+F++  +L+ H   +H + R Y C  C  RF   S +  H   H      KC
Sbjct: 2  FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 89 KLCPKMFT 96
          ++C K F+
Sbjct: 61 QVCGKAFS 68

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 57.9 bits (141), Expect = 4e-13
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDN 82
              C    CG+ F  +  L  H+++ H++ + + C    C   F     L  H + H +
Sbjct: 6  SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 83 TPRFKCKLCPKMF 95
          T  + C+      
Sbjct: 66 TRDYICEFSGPSS 78

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 56.8 bits (138), Expect = 2e-12
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNTP 84
                 CGK + K   L  H R  H  ++ Y CD   C  +F  +  L  H ++H    
Sbjct: 6  HTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR 64

Query: 85 RFKCKLCPKMFT 96
           F+C+ C + F+
Sbjct: 65 PFQCQKCDRAFS 76

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          KPY C  + CG  F +   LT H R  H   R +QC  C   F  +  L +H +RH
Sbjct: 34 KPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVHL 53
           +P+ C++C +AF +   L +H +  H 
Sbjct: 63 HRPFQCQKCDRAFSRSDHLALHMK-RHF 89

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.4 bits (137), Expect = 2e-12
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR-HVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          KPY C  C   F +  ++ MH       N  ++ C  C       S L VH ++ 
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.2 bits (108), Expect = 4e-08
 Identities = 8/33 (24%), Positives = 11/33 (33%)

Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRY 58
          V  + C  C     +K  L +H R  H      
Sbjct: 43 VAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 43 SLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH--DNTPRFKCKLCPKMFT 96
          S     R  H  ++ Y+C +C ARF  + ++ +H  +   +N  +F C  C  +  
Sbjct: 2  SSGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA 56

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 55.3 bits (134), Expect = 4e-12
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR-HVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
            Y C+ C + +    +   H       N + Y C  C   F    ++  H +  
Sbjct: 9  HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.1 bits (92), Expect = 8e-06
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 26 VKPYACEECGKAFRKKFSLTMHQRHVH 52
          VK Y C  C K F +K ++T H + +H
Sbjct: 38 VKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 53.7 bits (130), Expect = 1e-11
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARF 67
          KPY C+ CGK F +   L  H + VH ++R ++C + ++  
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.0 bits (129), Expect = 4e-11
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHV-HLNDRRYQCDLCLAR---FVTNSSLIVHKQRHDN 82
            + C++C  A+     LT+H     H  D  ++ D    +        SL+  + + D 
Sbjct: 18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77

Query: 83 TPRFKCKLCPKMF 95
              KC  C   F
Sbjct: 78 QKVLKCMYCGHSF 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 53.2 bits (129), Expect = 4e-11
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          KP+ C  C + F +   LT H R  H  ++ + CD+C  +F  +     H + H
Sbjct: 33 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 52.5 bits (127), Expect = 9e-11
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +PYAC  E C + F +  SLT H R +H   + +QC +C+  F  +  L  H + H    
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 85 RFKCKLCPKMFT 96
           F C +C + F 
Sbjct: 62 PFACDICGRKFA 73

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.1 bits (131), Expect = 4e-11
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 27 KPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDN 82
          +P+ C    C K + K   L MH R  H  ++ YQCD   C  RF  +  L  H++RH  
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

Query: 83 TPRFKCKLCPKMFT 96
             F+CK C + F+
Sbjct: 64 VKPFQCKTCQRKFS 77

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 53.7 bits (130), Expect = 5e-11
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 27  KPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
           KPY C+  +C + F +   L  HQR  H   + +QC  C  +F  +  L  H + H    
Sbjct: 35  KPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

Query: 85  RFKCKL--CPKMFT 96
            F C+   C K F 
Sbjct: 94  PFSCRWPSCQKKFA 107

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRH 80
           KP+ C+ C + F +   L  H R  H  ++ + C    C  +F  +  L+ H   H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.8 bits (125), Expect = 5e-11
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF +  SL  H R+ H  ++    
Sbjct: 11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 52.2 bits (126), Expect = 9e-11
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 31 CEECGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTPRFKC 88
           E CGKAF+K   L +HQ   H     Y+C    C  RF   S L  H++ H   P  K 
Sbjct: 6  FENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 89 KLCPKMF 95
            C  + 
Sbjct: 65 DSCSFVG 71

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.9 bits (107), Expect = 6e-08
 Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQR 79
           PY C  E C K F     L  H++ VH      + D C     T +  + H   
Sbjct: 30 LPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAE 83

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 2e-10
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY CE+CGK + ++ +L MHQR VH+ ++    
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQR-VHMGEKTSGP 43

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNTP 84
           + + C ECGKAF +   L  HQ  VH  ++ +QC    C  RF  + +L  H + H    
Sbjct: 33  RVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91

Query: 85  RFKCKL--CPKMFT 96
            + C    C K F 
Sbjct: 92  PYVCPFDGCNKKFA 105

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP 84
          +  AC  + C K FR   ++  H    H   R + C  C   FV +S L  H+  H    
Sbjct: 4  RTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 85 RFKCKL--CPKMFT 96
           F+C    C K F+
Sbjct: 62 PFQCTFEGCGKRFS 75

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 27  KPYAC--EECGKAFRKKFSLTMHQR 49
           +PY C  + C K F +  +L  H  
Sbjct: 91  RPYVCPFDGCNKKFAQSTNLKSHIL 115

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 2e-10
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY CE+CGK +  KF+L MHQ+ VH  +R    
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-10
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK+F   + LT H    H  ++    
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWI-THTREKPSGP 43

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 53.4 bits (129), Expect = 3e-10
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 27  KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQC--DLCLARFVTNSSLIVHKQRHDN 82
             Y C  E CGKAF+K   L +HQ   H     Y+C  + C  RF   S L  H++ H  
Sbjct: 103 CVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

Query: 83  TPRFKCKLCPKMF 95
            P  K   C  + 
Sbjct: 162 YPCKKDDSCSFVG 174

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 7/76 (9%)

Query: 27 KPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDN 82
          K Y C   +CG A+ K + L  H    H  ++ + C    C   F +   L  H   H  
Sbjct: 11 KRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 69

Query: 83 TPRFKCK--LCPKMFT 96
             F C    C   FT
Sbjct: 70 EKNFTCDSDGCDLRFT 85

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 27  KPYACEE--CGKAFRKKFSLTMHQR-HVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHD 81
           K + C+   C   F  K ++  H     ++    Y C    C   F  ++ L VH+  H 
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130

Query: 82  NTPRFKCK--LCPKMFT 96
               ++C    C K F+
Sbjct: 131 QQLPYECPHEGCDKRFS 147

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 47.6 bits (114), Expect = 3e-08
 Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 27  KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQR 79
            PY C  E C K F     L  H++ VH      + D C     T +  + H   
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-10
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          KPY C ECGK ++++  L  HQR VH  ++     
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPS 44

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 51.1 bits (123), Expect = 4e-10
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 27  KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN 82
           KPY C  E C   F +   LT H R  H   + +QC +C   F  +  L +H +RH N
Sbjct: 44  KPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 49.5 bits (119), Expect = 2e-09
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 27 KPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDN 82
          + + C+   C K + K   L  H R  H  ++ Y+C    C  RF  +  L  H ++H  
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG 72

Query: 83 TPRFKCKLCPKMFT 96
             F+C +C + F+
Sbjct: 73 AKPFQCGVCNRSFS 86

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 4e-10
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF    SLT HQ  +H  ++    
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGP 43

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 49.5 bits (119), Expect = 4e-10
 Identities = 14/23 (60%), Positives = 20/23 (86%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          + Y C+ECGK+FR+K SLT+H+R
Sbjct: 9  RVYECQECGKSFRQKGSLTLHER 31

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 5e-10
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAFR   +LT HQ  +H  ++    
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.5 bits (119), Expect = 5e-10
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+ECGK+FR    L  HQR VH  ++    
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQR-VHSGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 6e-10
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+ C K+FR   SLT+HQR +H  ++    
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQR-IHTGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 6e-10
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP  C ECGKAF  K  L MHQR  H++D+    
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.6 bits (117), Expect = 8e-10
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
           PY C ECGK F +K  L  HQ+  H        
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS 43

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.4 bits (124), Expect = 9e-10
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 9/79 (11%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR--HVHLNDRRYQCDLCLAR-----FVTNSSLIVHKQR 79
               + C + F  +  L  H    H+H   + + C           F     L+VH +R
Sbjct: 2  TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 80 HDNTPRFKCKL--CPKMFT 96
          H      KC    C K ++
Sbjct: 62 HTGEKPHKCTFEGCRKSYS 80

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 50.3 bits (121), Expect = 2e-09
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 27  KPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRH 80
           KPY CE   C KAF        HQ   H N++ Y C L  C  R+   SSL  H +  
Sbjct: 96  KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 49.1 bits (118), Expect = 7e-09
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 27  KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQC--DLCLARFVTNSSLIVHKQR-HD 81
           KP+ C  E C K++ +  +L  H R  H  ++ Y C  + C   F   S    H+ R H 
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 82  NTPRFKCKL--CPKMFT 96
           N   + CKL  C K +T
Sbjct: 125 NEKPYVCKLPGCTKRYT 141

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.7 bits (117), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
           PY C ECGKAF +K  L  HQR  H  +     
Sbjct: 9  NPYECSECGKAFNRKDQLISHQR-THAGESGPSS 41

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C +CGKAF +K  L +HQ+  H  +R    
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-09
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          K + C ECGKAF +K +L+MHQ+ +H  ++    
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          + Y C ECGKAF +K +L+MHQR +H  ++    
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-09
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY CEECGKAF     L  HQR +H  ++    
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C +CGKAF  + SLT HQ  +H   +    
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK FR    L+ HQR +H  ++    
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAFR + SL +HQ   H  ++    
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQA-THSGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          +PY C ECGKAF+ K SL  H+R  H  ++    
Sbjct: 11 RPYECIECGKAFKTKSSLICHRR-SHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C  CGK+FR K +L  HQR +H  ++    
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQR-IHTGEKSGPS 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C +CGK+F KK  L +HQR +H  +     
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          + Y C ECGKAF +K +L MHQR +H  ++    
Sbjct: 11 RHYECSECGKAFARKSTLIMHQR-IHTGEKPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          KPY+C  CGKAF     L  H R VH  +      
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF    S T HQR +H   R    
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          K + C EC   F +  SL +HQ  VH+ ++    
Sbjct: 11 KTWKCRECDMCFSQASSLRLHQN-VHVGEKPSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.4 bits (116), Expect = 1e-09
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          K + C+ECGK F    +L +HQR VH+ ++     
Sbjct: 11 KSHTCDECGKNFCYISALRIHQR-VHMGEKCSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 1e-09
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAFR K  L +H R  H  +     
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.2 bits (116), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C EC KAF  K +L +HQR  H  +     
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQR-THTGESGPSS 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C  CGKAF  + SL++HQR +H   +    
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF  + +L  HQ+ +H  ++    
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGP 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C  C KAF  K  L +HQ+  H  ++    
Sbjct: 9  KPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGP 41

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
           PY C +C K+F  K  L +HQR +H  ++    
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY CEECGK F  +  L  H   VH  ++    
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHM-VHTGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+ C KAF    SLT HQR VH  ++    
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
           PY C ECGKAF +K+ L  HQR  H  ++    
Sbjct: 11 NPYECHECGKAFSRKYQLISHQR-THAGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF +K +LT HQR +H  ++    
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+ CGKAFR    L  H   VH  +R    
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C +CGK+F  K  L +HQ+  H  +R    
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+EC K F +   L  H+R VH  +R    
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKR-VHTGERSSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK F +K  L+ HQR  H  ++    
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQR-THTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+ CGKAF     L  HQR +H  ++    
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
           P+ C ECGK F  K +L +HQ+ +H  +R    
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQK-IHTGERPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          K + C EC K F +  SLT+HQR +H  ++    
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-09
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C +CGKAF     L  H+R +H  ++    
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-09
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          +PY C ECGK F +   L  H +  H  ++    
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-09
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C  CGK+F KK  L +HQ+ +H  ++    
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.5 bits (114), Expect = 3e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C ECGK+F     L  HQR +H  ++    
Sbjct: 11 KPFECAECGKSFSISSQLATHQR-IHTGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-09
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          K Y C+ECGK+F +   L  H+R +H  ++    
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-09
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          KP+ C+ CGK+F  +  L  H   VH  ++     
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-09
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C EC KAF  K +L +HQR  H  ++    
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQR-THTGEKPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-09
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF +   L  H+R +H   R    
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 47.1 bits (113), Expect = 3e-09
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C +C K F  K  L +HQR  H   +    
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-09
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF  + +L  HQ+ +H   +    
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-09
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF +   L  HQR VH  ++    
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 4e-09
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF  K  L +H R  H  ++    
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C ECGK+F     L +HQR +H  +     
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQR-IHTGENPSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-09
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          +P+ C ECGK F ++  L  H R +H  ++    
Sbjct: 11 RPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.1 bits (113), Expect = 5e-09
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+ECGKAF +   L  HQR VH  ++    
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 5e-09
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          +PY C  CGKAF  + +L  HQ+ +H  ++    
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 5e-09
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C+ECGKAFR+   L  H R +H  ++    
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 46.7 bits (112), Expect = 5e-09
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C ECGK F ++ +L +H + +H  ++    
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 5e-09
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF +   L  HQR +H  ++    
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 5e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C+ C KAF +K  L  HQ+  H  ++    
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 5e-09
 Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          + + C +CGK F +  +   H+R +H  ++    
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRR-IHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 6e-09
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ C ECGK++ ++  LT HQR VH  ++    
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 6e-09
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK FR+   L  HQ  +H  ++    
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 6e-09
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK F +   LT H R +H  ++    
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 6e-09
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK+F +K  L  H+R +H  ++    
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 6e-09
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ CEECGK F +   L  HQR VH  ++    
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 7e-09
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          K Y C+ CGK F +   L  HQR VH  ++    
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 7e-09
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          KP+ CEECGK F        HQR  H  ++     
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 8e-09
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KP+ CEECGK F +   L  HQR VH  ++    
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQR-VHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.4 bits (111), Expect = 9e-09
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          K Y C ECGK F +   L+ HQ+ +H  ++    
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 1e-08
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          +P+ C ECGK+F +   L  HQR +H  ++    
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGP 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.1 bits (110), Expect = 1e-08
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
           PY C +CGK+F ++ SL +HQR
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQR 32

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 1e-08
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGKAF  K  L +H+R  H        
Sbjct: 11 KPYECNECGKAFIWKSLLIVHER-THAGVSGPSS 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-08
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK F +   L  H+  +H  ++    
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-08
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK F +   L  HQR +H   +    
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 2e-08
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVH 52
          K + C ECG+ F  K  L  HQR +H
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQR-IH 35

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.1 bits (115), Expect = 2e-08
 Identities = 15/80 (18%), Positives = 21/80 (26%), Gaps = 10/80 (12%)

Query: 27  KPYACEECGKAFRKKFSLTMHQRHVH--------LNDRRYQCDLCLARFVTNSSLIVHKQ 78
                + C + F     L  H    H              +C      F     L+ H +
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 79  RHDNTPRFKCKL--CPKMFT 96
            H     F C    C K+F 
Sbjct: 84  VHTGEKPFPCPFPGCGKIFA 103

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.5 bits (111), Expect = 6e-08
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 24  YCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHD 81
           +      C   GK+F+ K+ L  H R VH  ++ + C    C   F  + +L +HK+ H 
Sbjct: 58  HVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 116

Query: 82  NTPRFKCKL--CPKMFTN 97
               FKC+   C + F N
Sbjct: 117 GEKPFKCEFEGCDRRFAN 134

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 27  KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDN 82
           KP+ C    CGK F +  +L +H+R  H  ++ ++C+   C  RF  +S    H   H +
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147

Query: 83  TPRFKC 88
                 
Sbjct: 148 DKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.7 bits (96), Expect = 8e-06
 Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 3/37 (8%)

Query: 27  KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
           KP+ C  E C + F        H   VH +D+     
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 35.3 bits (82), Expect = 8e-04
 Identities = 9/73 (12%), Positives = 15/73 (20%), Gaps = 10/73 (13%)

Query: 33 ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH---------DNT 83
            G + +        +  +           C   F T   L+ H                
Sbjct: 2  SSGSSGQPIKQELSCKW-IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 84 PRFKCKLCPKMFT 96
             +C    K F 
Sbjct: 61 YWEECPREGKSFK 73

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.3 bits (108), Expect = 2e-08
 Identities = 14/23 (60%), Positives = 16/23 (69%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          K Y C ECGKAF + F LT HQ+
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQK 33

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-08
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK F +   L  H+  +H  ++    
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-08
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK F +   L  H+  +H  ++    
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.9 bits (107), Expect = 3e-08
 Identities = 14/23 (60%), Positives = 18/23 (78%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          KPY C++CGKAF +K SL +H R
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIR 32

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-08
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC 60
          KPY C ECGK F +   L  H+R VH   +    
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGP 43

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 44.6 bits (106), Expect = 7e-08
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          +PYAC  E C + F +   LT H R +H   + +QC +C+  F  +  L  H + H
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.3 bits (104), Expect = 7e-08
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 29 YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          Y CEECG   +K   L  H R  H + R Y C  C   F T  +L  H +  
Sbjct: 2  YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 8e-08
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          KP+ C+ECG  F    SL  H R  H         
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGPS 44

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 43.3 bits (103), Expect = 1e-07
 Identities = 12/23 (52%), Positives = 13/23 (56%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          KPY CE CG  FR   +L  H R
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLR 32

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.6 bits (100), Expect = 2e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC 63
          K  ACE CGK FR  + L  H+   H  ++ Y     
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPS 46

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.1 bits (100), Expect = 3e-07
 Identities = 10/23 (43%), Positives = 11/23 (47%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          KPY CE CG  F +   L  H  
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVL 32

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.9 bits (99), Expect = 5e-07
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVH 52
          KPY+C EC + F     L  HQ+ +H
Sbjct: 9  KPYSCAECKETFSDNNRLVQHQK-MH 33

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 41.6 bits (97), Expect = 1e-06
 Identities = 8/54 (14%), Positives = 19/54 (35%), Gaps = 8/54 (14%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          +   C +CG  F ++ +L+          +   C+ C       ++L   +   
Sbjct: 17 RSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAALNKDEGNE 62

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.1 bits (94), Expect = 4e-06
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRH 80
          + + C    CGK + K   L  H R  H  ++ + C    C  RF  +  L  H++ H
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.0 bits (93), Expect = 7e-06
 Identities = 10/70 (14%), Positives = 16/70 (22%), Gaps = 8/70 (11%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLAR--------FVTNSSLIVHKQ 78
               + C + F     L  H    H+        +C           F     L+ H +
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 79 RHDNTPRFKC 88
           H        
Sbjct: 84 VHTGEKSGPS 93

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (90), Expect = 1e-05
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
           P+ C +C + F ++  L  H+R
Sbjct: 11 NPFKCSKCDRVFTQRNYLVQHER 33

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 4e-05
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 3/57 (5%)

Query: 26  VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN 82
           +  + C  C   F    SL  H R+         C +C   F +  S + H  +  N
Sbjct: 72  ISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDHVCKKHN 125

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 36.9 bits (86), Expect = 5e-05
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 3/37 (8%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          KP+AC    CG  F +   L+ H+R  H   +     
Sbjct: 11 KPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPS 46

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens} Length = 48

 Score = 34.8 bits (79), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLND 55
          KPYAC+ CGK ++ +  L+ H  H HL +
Sbjct: 6  KPYACDICGKRYKNRPGLSYHYAHSHLAE 34

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 35.3 bits (80), Expect = 6e-04
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 4/70 (5%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF 86
          + Y C  C            H+R          C  C  RF +      H+ + +   + 
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHESKCEYK-KL 70

Query: 87 KCKLCPKMFT 96
           C  C + F 
Sbjct: 71 TCLECMRTFK 80

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 33.6 bits (76), Expect = 8e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRR 57
          K + C ECG+ F +  SL  HQ  +H+  + 
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQV-LHMGQKN 40

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	100
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.86
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.85
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.85
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.85
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.85
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.84
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.84
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.84
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.83
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.8
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.8
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.79
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.78
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.76
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.76
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.76
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.75
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.74
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.74
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.74
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.73
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.72
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.69
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.65
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.65
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.63
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.62
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.61
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.59
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.58
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.58
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.56
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.54
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.52
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.52
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.52
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.51
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.5
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.5
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.5
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.5
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.5
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.5
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.5
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.5
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.5
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.5
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.5
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.5
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.5
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.5
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.49
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.49
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.49
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.49
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.49
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.49
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.49
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.49
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.49
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.49
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.49
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.49
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.48
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.48
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.48
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.48
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.48
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.48
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.48
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.48
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.47
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.46
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.45
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.45
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.45
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.45
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.44
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.43
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.41
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.4
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.4
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.4
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.4
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.4
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.4
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.39
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.38
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.38
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.38
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.38
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.35
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.35
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.35
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.35
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.35
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.34
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.34
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.33
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.33
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.33
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.33
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.32
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.31
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.3
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.3
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.3
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.3
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.3
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.28
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.28
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.26
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.23
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.23
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.22
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.18
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.15
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.15
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.11
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.05
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.03
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.02
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.01
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.97
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.95
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.93
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.92
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.92
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.92
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.84
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.78
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.78
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.74
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.74
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.72
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.71
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.69
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.65
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.65
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.65
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.63
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.61
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.6
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.59
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.59
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.58
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.58
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.56
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.54
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.52
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.51
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.51
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.9
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.5
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.5
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.48
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.47
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.46
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.45
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.45
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.41
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.39
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.39
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.37
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.73
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.7
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.34
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.3
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.6
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.55
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.19
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.11
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.88
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.22
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.15
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.62
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.57
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.39
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.13
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.52
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.51
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.32
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	94.2
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	94.14
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.22
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	91.15
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	91.0
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.67
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	89.56
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	88.72
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	88.16
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	86.48
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	85.85
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.98
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	84.78
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.43
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	83.16
2odx_A	80	Cytochrome C oxidase polypeptide IV; all beta-prot	82.93
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	82.88
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	82.31
1v54_F	98	VI, cytochrome C oxidase polypeptide VB; oxidoredu	81.75
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	81.52
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	80.76

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=2.5e-26  Score=121.94  Aligned_cols=95  Identities=20%  Similarity=0.278  Sum_probs=77.7

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +..++..|.....|..|+++|.+++||.|++|++.|.....|..|+ ..|++++||.|++|++.|.....|..|++.+++
T Consensus        25 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           25 CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLACGKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             ETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSSCCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhc-cccCCCccccCCCCCCCcCCHHHHHHHhHHhcC
Confidence            4567788888888888888888888888888888888888888888 478888888888888888888888888888776


Q ss_pred             CC------CeecCCCccccCCC
Q psy14147         83 TP------RFKCKLCPKMFTNT   98 (100)
Q Consensus        83 ~~------~~~C~~C~~~f~~~   98 (100)
                      ++      +|.|..|++.|..+
T Consensus       104 ~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A          104 QDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCCCCCCCeecCCCCchhhhc
Confidence            53      47788888877653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=3.8e-26  Score=121.21  Aligned_cols=83  Identities=24%  Similarity=0.462  Sum_probs=77.3

Q ss_pred             HHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCcccc
Q psy14147         16 VQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMF   95 (100)
Q Consensus        16 l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   95 (100)
                      +..|.++|.|+++|.|++|++.|.....|..|++ .|.+++||.|+.|++.|.....|..|+++|++++||.|+.||+.|
T Consensus        10 ~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F   88 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSF   88 (133)
T ss_dssp             SSEEEEEETTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             HhhceeecCCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCc
Confidence            4556678899999999999999999999999994 899999999999999999999999999999999999999999999


Q ss_pred             CCCC
Q psy14147         96 TNTV   99 (100)
Q Consensus        96 ~~~~   99 (100)
                      .+.+
T Consensus        89 ~~~~   92 (133)
T 2lt7_A           89 INYQ   92 (133)
T ss_dssp             SSHH
T ss_pred             CCHH
Confidence            8753

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=2.1e-25  Score=116.79  Aligned_cols=96  Identities=21%  Similarity=0.450  Sum_probs=89.0

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhh--hcCCCCCccCccccccccChhHHHHHHHhc
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRH--VHLNDRRYQCDLCLARFVTNSSLIVHKQRH   80 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~--~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~   80 (100)
                      +..++..|.....|..|++.|.++++|.|..|++.|.....|..|+..  .+.+..+|.|.+|++.|.....|..|++.|
T Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h   89 (124)
T 2dlq_A           10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH   89 (124)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence            567888999999999999999999999999999999999999999942  257788999999999999999999999999


Q ss_pred             CCCCCeecCCCccccCCC
Q psy14147         81 DNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        81 ~~~~~~~C~~C~~~f~~~   98 (100)
                      ++++||.|+.|++.|.+.
T Consensus        90 ~~~~~~~C~~C~~~f~~~  107 (124)
T 2dlq_A           90 TGEMPYKCSSCSQQFMQK  107 (124)
T ss_dssp             SSSCSEECSSSCCEESSH
T ss_pred             CCCCCccCCCccchhCCH
Confidence            999999999999999864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=4.3e-25  Score=114.88  Aligned_cols=93  Identities=26%  Similarity=0.518  Sum_probs=88.1

Q ss_pred             hHHHHHHHHHHHHhccccccCCCceeCc--hhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          5 SREVMEIQKDVVQSFPIILYCVKPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         5 ~~~~~~~~~~~l~~h~~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      .++..|.....|..|++.|.++++|.|.  .|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|++
T Consensus        13 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (119)
T 2jp9_A           13 GCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG   91 (119)
T ss_dssp             TSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred             CCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence            4788899999999999999999999999  79999999999999994 89999999999999999999999999999999


Q ss_pred             CCCeec--CCCccccCCC
Q psy14147         83 TPRFKC--KLCPKMFTNT   98 (100)
Q Consensus        83 ~~~~~C--~~C~~~f~~~   98 (100)
                      ++||.|  +.|++.|.+.
T Consensus        92 ~~~~~C~~~~C~~~f~~~  109 (119)
T 2jp9_A           92 EKPFSCRWPSCQKKFARS  109 (119)
T ss_dssp             CCCEECCSTTCCCEESSH
T ss_pred             CCCeeCCCCCCccccCCH
Confidence            999999  8999999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=3.3e-25  Score=123.54  Aligned_cols=95  Identities=28%  Similarity=0.532  Sum_probs=72.2

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +..++..|.....|..|++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|+.|++.|.....|..|++.|++
T Consensus        80 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A           80 CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            3455666777777777777777777777777777777777777777 377777778888888888888888888888888


Q ss_pred             CCCeecCCCccccCCC
Q psy14147         83 TPRFKCKLCPKMFTNT   98 (100)
Q Consensus        83 ~~~~~C~~C~~~f~~~   98 (100)
                      ++||.|+.|++.|.+.
T Consensus       159 ~~~~~C~~C~~~f~~~  174 (190)
T 2i13_A          159 EKPYKCPECGKSFSRR  174 (190)
T ss_dssp             CCCEECTTTCCEESSH
T ss_pred             CCCeECCCCCCccCCH
Confidence            8888888888877654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=4.4e-24  Score=111.84  Aligned_cols=93  Identities=27%  Similarity=0.473  Sum_probs=87.0

Q ss_pred             hHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChhHHHHHHHhcCC
Q psy14147          5 SREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         5 ~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~   82 (100)
                      .++..|.....|..|++.| +.++|.|..|++.|.....|..|+ ..|.++++|.|..  |++.|.....|..|++.|++
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   89 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG   89 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6788899999999999998 889999999999999999999999 5899999999986  99999999999999999999


Q ss_pred             CCCeecC--CCccccCCCC
Q psy14147         83 TPRFKCK--LCPKMFTNTV   99 (100)
Q Consensus        83 ~~~~~C~--~C~~~f~~~~   99 (100)
                      ++||.|+  .|++.|.+.+
T Consensus        90 ~~~~~C~~~~C~~~f~~~~  108 (124)
T 1ubd_C           90 DRPYVCPFDGCNKKFAQST  108 (124)
T ss_dssp             CCCCCCCSTTCCCCCSSTT
T ss_pred             CCceECCCCCCCCccCCHH
Confidence            9999996  5999998765

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.88  E-value=2.1e-23  Score=116.26  Aligned_cols=93  Identities=29%  Similarity=0.539  Sum_probs=52.6

Q ss_pred             chHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCC
Q psy14147          4 RSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus         4 ~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ..++..|.....|..|++.|.++++|.|..|++.|.....|..|+ ..|.+.++|.|+.|++.|.....|..|++.|+++
T Consensus        25 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  103 (190)
T 2i13_A           25 PECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE  103 (190)
T ss_dssp             ------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTC
T ss_pred             CCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccCCHHHHHHHHHhcCCC
Confidence            455666666666666666666666666666666666666666666 3555556666666666666666666666666555


Q ss_pred             CCeecCCCccccCC
Q psy14147         84 PRFKCKLCPKMFTN   97 (100)
Q Consensus        84 ~~~~C~~C~~~f~~   97 (100)
                      ++|.|+.|++.|.+
T Consensus       104 ~~~~C~~C~~~f~~  117 (190)
T 2i13_A          104 KPYACPECGKSFSQ  117 (190)
T ss_dssp             CCEECTTTCCEESS
T ss_pred             CCCcCCCCCCccCC
Confidence            56666666655554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=3.3e-23  Score=112.09  Aligned_cols=91  Identities=24%  Similarity=0.424  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHhccccccCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChhHHHHHH-HhcC
Q psy14147          7 EVMEIQKDVVQSFPIILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHK-QRHD   81 (100)
Q Consensus         7 ~~~~~~~~~l~~h~~~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~-~~~~   81 (100)
                      +..|.....|..|++.|.+++||.|..  |++.|.....|..|+ ..|.++++|.|+.  |++.|.....|..|+ +.|+
T Consensus        46 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~  124 (155)
T 2gli_A           46 LRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS  124 (155)
T ss_dssp             TCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHH-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             hhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHH-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            466777778888888887778888874  888888888888888 4777777888877  888888888888887 6788


Q ss_pred             CCCCeecCC--CccccCCC
Q psy14147         82 NTPRFKCKL--CPKMFTNT   98 (100)
Q Consensus        82 ~~~~~~C~~--C~~~f~~~   98 (100)
                      +++||.|+.  |++.|.+.
T Consensus       125 ~~~~~~C~~~~C~~~f~~~  143 (155)
T 2gli_A          125 NEKPYVCKLPGCTKRYTDP  143 (155)
T ss_dssp             SCCCEECCSTTTCCEESSH
T ss_pred             CCCCeeCCCCCCccccCCH
Confidence            888888877  88888754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=2.5e-23  Score=107.77  Aligned_cols=84  Identities=20%  Similarity=0.390  Sum_probs=75.8

Q ss_pred             HHHHhccccccCCCceeCchhhhhccChhHHHHHHhhh--cCCCCCcc-Cccccccc--cChhHHHHHHHhcCCCCCeec
Q psy14147         14 DVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHV--HLNDRRYQ-CDLCLARF--VTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        14 ~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~--~~~~~~~~-c~~c~~~~--~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      +.|..|+++|.+++||.|.+|++.|.....|..|++ .  |.+..++. |..|++.|  .....|..|++.|++++||.|
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            568899999999999999999999999999999995 6  65566554 99999988  888999999999999999999


Q ss_pred             CCCccccCCC
Q psy14147         89 KLCPKMFTNT   98 (100)
Q Consensus        89 ~~C~~~f~~~   98 (100)
                      +.|++.|.+.
T Consensus        84 ~~C~k~f~~~   93 (115)
T 2dmi_A           84 MYCGHSFESL   93 (115)
T ss_dssp             SSSCCBCSSH
T ss_pred             CCCCCccCCH
Confidence            9999999864

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.85  E-value=1.7e-22  Score=112.54  Aligned_cols=95  Identities=21%  Similarity=0.387  Sum_probs=78.4

Q ss_pred             chHHHHHHHHHHHHhccccccCCCceeCc--hhhhhccChhHHHHHHhhhc-CCCCCccC--ccccccccChhHHHHHHH
Q psy14147          4 RSREVMEIQKDVVQSFPIILYCVKPYACE--ECGKAFRKKFSLTMHQRHVH-LNDRRYQC--DLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus         4 ~~~~~~~~~~~~l~~h~~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~-~~~~~~~c--~~c~~~~~~~~~l~~h~~   78 (100)
                      ..++..|.....|..|+++|.++++|.|.  .|++.|.....|..|+...| .+..+|.|  ..|++.|.....|..|++
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence            45777788888888888888888888888  78888888888888884356 45678888  788888888888888888


Q ss_pred             hcCCCCCeecCC--CccccCCC
Q psy14147         79 RHDNTPRFKCKL--CPKMFTNT   98 (100)
Q Consensus        79 ~~~~~~~~~C~~--C~~~f~~~   98 (100)
                      .|++++||.|+.  |++.|.+.
T Consensus       128 ~H~~~~~~~C~~~~C~k~F~~~  149 (190)
T 1tf6_A          128 SHTQQLPYECPHEGCDKRFSLP  149 (190)
T ss_dssp             GGSSSCSSBCCSSSCCCBCSSH
T ss_pred             HhCCCCCccCCCCCCCchhcCH
Confidence            888888899977  98888764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.9e-21  Score=97.70  Aligned_cols=75  Identities=33%  Similarity=0.600  Sum_probs=54.4

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      +.++++|.|.+|++.|.....|..|+ ..|.+.++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.+.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence            34566777777777777777777777 3677777777777777777777777777777777777777777777653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.9e-21  Score=95.86  Aligned_cols=80  Identities=23%  Similarity=0.325  Sum_probs=73.4

Q ss_pred             HHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCC----CCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         15 VVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND----RRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        15 ~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~----~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|..|+++|.+++||.|..|++.|.....|..|++ .+...    ++|.|..|++.|.....|..|++.|++++++.|..
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHH-HTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHH-HhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            46789999999999999999999999999999995 55443    78999999999999999999999999999999999


Q ss_pred             Ccccc
Q psy14147         91 CPKMF   95 (100)
Q Consensus        91 C~~~f   95 (100)
                      |+..|
T Consensus        81 ~~~~~   85 (86)
T 1x6h_A           81 SGPSS   85 (86)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.85  E-value=1e-22  Score=110.26  Aligned_cols=95  Identities=25%  Similarity=0.505  Sum_probs=86.0

Q ss_pred             cchHHHHHHHHHHHHhcccc-ccCCCc--------eeCchhhhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChh
Q psy14147          3 VRSREVMEIQKDVVQSFPII-LYCVKP--------YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNS   71 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~-~~~~~~--------~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~   71 (100)
                      +..++..|.....|..|++. |.+..+        |.|.+|++.|.....|..|++ .|.++++|.|..  |++.|....
T Consensus        28 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~  106 (155)
T 2rpc_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSE  106 (155)
T ss_dssp             CCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTH-HHHCCCSEECSCTTTCCEESCHH
T ss_pred             cccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHH-hcCCCCcccCCcCCCCCccCCHH
Confidence            45688899999999999987 666554        789999999999999999994 899999999998  999999999


Q ss_pred             HHHHHHHhcCCCCCeecCC--CccccCCC
Q psy14147         72 SLIVHKQRHDNTPRFKCKL--CPKMFTNT   98 (100)
Q Consensus        72 ~l~~h~~~~~~~~~~~C~~--C~~~f~~~   98 (100)
                      .|..|++.|++++||.|+.  |++.|.+.
T Consensus       107 ~L~~H~~~h~~~~~~~C~~~~C~k~f~~~  135 (155)
T 2rpc_A          107 NLKIHKRTHTGEKPFKCEFEGCDRRFANS  135 (155)
T ss_dssp             HHHHHHTTTCSSCSBCCSSTTCCCCBSSH
T ss_pred             HHHHHHHhhCCCCCccCCCCCCCCccCCH
Confidence            9999999999999999997  99999864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.84  E-value=1.4e-21  Score=90.37  Aligned_cols=58  Identities=33%  Similarity=0.634  Sum_probs=55.1

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      ++||.|.+|++.|.....|..|+ ..|++++||.|.+|+++|.....|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            78999999999999999999999 49999999999999999999999999999999874

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.1e-21  Score=93.37  Aligned_cols=73  Identities=21%  Similarity=0.458  Sum_probs=67.8

Q ss_pred             cCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChhHHHHHHHhcCCCCCeecCCCccccC
Q psy14147         24 YCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFT   96 (100)
Q Consensus        24 ~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   96 (100)
                      .++++|.|..  |++.|.....|..|++..|.++++|.|..  |++.|.....|..|++.|++++||.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4678899987  99999999999999943699999999999  9999999999999999999999999999999984

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.4e-21  Score=99.01  Aligned_cols=75  Identities=31%  Similarity=0.604  Sum_probs=70.0

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .|.++++|.| .|++.|.....|..|++ .|.+.++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.+.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            5778999999 99999999999999994 899999999999999999999999999999999999999999999864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.3e-21  Score=105.75  Aligned_cols=96  Identities=18%  Similarity=0.336  Sum_probs=86.4

Q ss_pred             cchHHHHHHHHHHHHhccc---cccCCCceeCchh-----hhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChhH
Q psy14147          3 VRSREVMEIQKDVVQSFPI---ILYCVKPYACEEC-----GKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSS   72 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~---~~~~~~~~~c~~C-----~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~   72 (100)
                      +..++..|.+...|..|++   .|.+.++|.|..|     ++.|.....|..|+ ..|.++++|.|+.  |++.|.....
T Consensus         6 C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~   84 (155)
T 2gli_A            6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTGEKPHKCTFEGCRKSYSRLEN   84 (155)
T ss_dssp             BTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT-HHHHCCCCCCCCSTTCCCCCSSHHH
T ss_pred             cCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHH-HhcCCCCCccCCCCCCCCcccCHHH
Confidence            4567888999999999998   7888999998753     48999999999999 5899999999985  9999999999


Q ss_pred             HHHHHHhcCCCCCeecCC--CccccCCCC
Q psy14147         73 LIVHKQRHDNTPRFKCKL--CPKMFTNTV   99 (100)
Q Consensus        73 l~~h~~~~~~~~~~~C~~--C~~~f~~~~   99 (100)
                      |..|++.|++++||.|+.  |++.|.+.+
T Consensus        85 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~  113 (155)
T 2gli_A           85 LKTHLRSHTGEKPYMCEHEGCSKAFSNAS  113 (155)
T ss_dssp             HHHHHHHTTTCCCEECCSTTCCCEESSSS
T ss_pred             HHHHHHHcCCCCCeeCCCCCCCCccCCHH
Confidence            999999999999999998  999998765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=1.1e-21  Score=100.18  Aligned_cols=71  Identities=34%  Similarity=0.772  Sum_probs=37.2

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   97 (100)
                      +++|.|..|++.|.....|..|+ ..|.+.++|.|.+|++.|.....|..|++.|+++++|.|..|++.|.+
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   85 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ   85 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSS
T ss_pred             CcCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccC
Confidence            44455555555555555555555 245555555555555555555555555555555555555555555543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=8.9e-21  Score=95.06  Aligned_cols=74  Identities=31%  Similarity=0.656  Sum_probs=66.8

Q ss_pred             cCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCC--CCeecCCCccccCCC
Q psy14147         24 YCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT--PRFKCKLCPKMFTNT   98 (100)
Q Consensus        24 ~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~--~~~~C~~C~~~f~~~   98 (100)
                      .++++|.|.+|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|+++  ++|.|+.|++.|.+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~   78 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRP   78 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCH
Confidence            46788999999999999999999994 898899999999999999999999999999887  899999999999864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=5.1e-21  Score=93.51  Aligned_cols=70  Identities=31%  Similarity=0.737  Sum_probs=55.2

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      ||.|.+|++.|.....|..|++ .|.+.++|.|..|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   70 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQS   70 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCCh
Confidence            5778888888888888888874 677777888888888888888888888888888888888888887754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=8e-21  Score=94.34  Aligned_cols=71  Identities=32%  Similarity=0.798  Sum_probs=46.3

Q ss_pred             CCceeCc--hhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCC
Q psy14147         26 VKPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        26 ~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   97 (100)
                      ++||.|.  .|++.|.....|..|++ .|.+.++|.|..|++.|.....|..|++.|++++||.|+.|++.|.+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   74 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR   74 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCC
Confidence            4566665  46666666666666663 66666666666666666666666666666666666666666666654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=3.2e-20  Score=94.75  Aligned_cols=85  Identities=24%  Similarity=0.374  Sum_probs=79.8

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +..++..|.....|..|++.|.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++.|++
T Consensus        20 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           20 CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR-YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHH-HHhCCCCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence            5567888999999999999999999999999999999999999999 589999999999999999999999999999999


Q ss_pred             CCCeec
Q psy14147         83 TPRFKC   88 (100)
Q Consensus        83 ~~~~~C   88 (100)
                      ++||..
T Consensus        99 ~~~~~~  104 (106)
T 2ee8_A           99 TSSPTA  104 (106)
T ss_dssp             CCCCCC
T ss_pred             CCCCcC
Confidence            999864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=8.3e-21  Score=95.34  Aligned_cols=83  Identities=25%  Similarity=0.391  Sum_probs=77.8

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +..++..|.....|..|++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++.|++
T Consensus        11 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPYASRNSSQLTVHLRSHTG   89 (96)
T ss_dssp             BTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCCCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            5678889999999999999999999999999999999999999999 489999999999999999999999999999998


Q ss_pred             CCCe
Q psy14147         83 TPRF   86 (100)
Q Consensus        83 ~~~~   86 (100)
                      +++.
T Consensus        90 ~~~p   93 (96)
T 2dmd_A           90 DSGP   93 (96)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.1e-20  Score=96.70  Aligned_cols=75  Identities=17%  Similarity=0.345  Sum_probs=48.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   97 (100)
                      +++.|.++++|.|.+|++.|.....|..|++ .|  .++|.|.+|++.|.....|..|+. |++++||.|+.|++.|.+
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHER-LC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-HH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSS
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHH-HC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCC
Confidence            4455666666666666666666666666663 45  246666666666666666666664 666666666666666654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.80  E-value=2.8e-21  Score=107.63  Aligned_cols=94  Identities=26%  Similarity=0.421  Sum_probs=86.8

Q ss_pred             chHHHHHHHHHHHHhccccccCCCceeC--chhhhhccChhHHHHHHhhhcCCCCCccCc--cccccccChhHHHHHH-H
Q psy14147          4 RSREVMEIQKDVVQSFPIILYCVKPYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHK-Q   78 (100)
Q Consensus         4 ~~~~~~~~~~~~l~~h~~~~~~~~~~~c--~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~-~   78 (100)
                      ..++..|.....|..|++.|.++++|.|  ..|++.|.....|..|+ ..|.++++|.|.  .|++.|.....|..|+ +
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   96 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR   96 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEESCHHHHHHHHHT
T ss_pred             CCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCccCCHHHHHHHHHH
Confidence            4688899999999999999999999999  88999999999999999 589999999999  8999999999999999 6


Q ss_pred             hc-CCCCCeec--CCCccccCCC
Q psy14147         79 RH-DNTPRFKC--KLCPKMFTNT   98 (100)
Q Consensus        79 ~~-~~~~~~~C--~~C~~~f~~~   98 (100)
                      .| .++++|.|  +.|++.|.+.
T Consensus        97 ~h~~~~~~~~C~~~~C~k~f~~~  119 (190)
T 1tf6_A           97 FHNIKICVYVCHFENCGKAFKKH  119 (190)
T ss_dssp             TSSTTTSCCEECSSSSCEECSSH
T ss_pred             hcCCCcceeeCCCCCCccccCCH
Confidence            67 47889999  8999999864

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=3.2e-21  Score=95.79  Aligned_cols=79  Identities=23%  Similarity=0.385  Sum_probs=73.5

Q ss_pred             hHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147          5 SREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus         5 ~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      .++..|.....|..|+++|.++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|++.|++++
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHH-HHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            57888999999999999999999999999999999999999999 48999999999999999999999999999999875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.80  E-value=4.8e-21  Score=103.63  Aligned_cols=86  Identities=21%  Similarity=0.379  Sum_probs=80.8

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChhHHHHHHH
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQ   78 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~   78 (100)
                      +..++..|.....|..|++.|.++++|.|..  |++.|.....|..|+ ..|.++++|.|..  |++.|.....|..|++
T Consensus        65 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A           65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             CTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             CCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            4567888999999999999999999999998  999999999999999 5999999999997  9999999999999999


Q ss_pred             hcCCCCCeecC
Q psy14147         79 RHDNTPRFKCK   89 (100)
Q Consensus        79 ~~~~~~~~~C~   89 (100)
                      .|++++||.|.
T Consensus       144 ~H~~~k~~~c~  154 (155)
T 2rpc_A          144 VHTSDKSGPSS  154 (155)
T ss_dssp             TTTSCCCSCSC
T ss_pred             HhcCCCCCCCC
Confidence            99999999885

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=9.5e-20  Score=88.21  Aligned_cols=69  Identities=29%  Similarity=0.550  Sum_probs=63.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      +...+.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++.|++++||.|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            334556789999999999999999999999 589999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=8.2e-20  Score=92.68  Aligned_cols=69  Identities=20%  Similarity=0.273  Sum_probs=62.8

Q ss_pred             cCCCceeCchhhhhccChhHHHHHHhhhc---CCCCCccCccccccccChhHHHHH-HHhcCCCCCeecCCCc
Q psy14147         24 YCVKPYACEECGKAFRKKFSLTMHQRHVH---LNDRRYQCDLCLARFVTNSSLIVH-KQRHDNTPRFKCKLCP   92 (100)
Q Consensus        24 ~~~~~~~c~~C~~~f~~~~~l~~h~~~~~---~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~~~~~~C~~C~   92 (100)
                      .+++||.|..|++.|.....|..|++..|   .+++||.|..|++.|.....|..| ++.|++++||.|..+.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            47899999999999999999999995358   568899999999999999999999 8999999999998754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=7.5e-21  Score=92.92  Aligned_cols=79  Identities=24%  Similarity=0.531  Sum_probs=73.1

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +..++..|.....|..|++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|++.|+|
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A            4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            4567788889999999999999999999999999999999999999 489999999999999999999999999999875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.78  E-value=1.9e-19  Score=89.18  Aligned_cols=72  Identities=28%  Similarity=0.678  Sum_probs=64.1

Q ss_pred             CCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCc--cccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         26 VKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        26 ~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .++|.|..  |++.|.....|..|+ ..|.+.++|.|+  .|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRS   78 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCH
Confidence            46789998  999999999999999 488888999997  5999999999999999999999999999999999864

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=1e-19  Score=91.92  Aligned_cols=78  Identities=14%  Similarity=0.244  Sum_probs=69.9

Q ss_pred             HHHHhccccccCCCceeCchhhhhcc-ChhHHHHHHhhhcCC-CCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         14 DVVQSFPIILYCVKPYACEECGKAFR-KKFSLTMHQRHVHLN-DRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        14 ~~l~~h~~~~~~~~~~~c~~C~~~f~-~~~~l~~h~~~~~~~-~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      ..+..|++.|.++++|.|.+|++.|. ....|..|++ .|.+ +++|.|.+|++.|.....|..|++.|++++|......
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~~   88 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHME-VCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEAS   88 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHH-HHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCCC
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHH-HHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45678899999999999999999999 9999999994 8887 8899999999999999999999999999999755443


Q ss_pred             c
Q psy14147         92 P   92 (100)
Q Consensus        92 ~   92 (100)
                      .
T Consensus        89 ~   89 (98)
T 2gqj_A           89 E   89 (98)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.7e-20  Score=94.75  Aligned_cols=83  Identities=14%  Similarity=0.143  Sum_probs=76.2

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHH-hcC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQ-RHD   81 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~   81 (100)
                      +..++..|.....|..|++.|  .++|.|.+|++.|.....|..|+ . |.++++|.|.+|++.|.....|..|++ .|+
T Consensus        19 C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   94 (107)
T 1wjp_A           19 CRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN   94 (107)
T ss_dssp             CTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             CCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhCCHHHHHHHHHHHcC
Confidence            456788899999999999998  47899999999999999999998 4 999999999999999999999999997 999


Q ss_pred             CCCCeecC
Q psy14147         82 NTPRFKCK   89 (100)
Q Consensus        82 ~~~~~~C~   89 (100)
                      ++++|.+.
T Consensus        95 ~~~~~~~~  102 (107)
T 1wjp_A           95 QNNMAPTS  102 (107)
T ss_dssp             CCCCCCCC
T ss_pred             CCCCCCCC
Confidence            99999764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.76  E-value=4.3e-19  Score=92.07  Aligned_cols=74  Identities=35%  Similarity=0.742  Sum_probs=69.2

Q ss_pred             cCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCc--cccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         24 YCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        24 ~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .++++|.|..  |++.|.....|..|++ .|.+.++|.|.  .|++.|.....|..|++.|+++++|.|+.|++.|.+.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCH
Confidence            4678999997  9999999999999995 89999999999  7999999999999999999999999999999999864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.76  E-value=1.3e-18  Score=83.60  Aligned_cols=64  Identities=31%  Similarity=0.688  Sum_probs=60.1

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCe
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      .+.++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|++.|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHH-HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHH-HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            456789999999999999999999999 5899999999999999999999999999999999986

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.76  E-value=1.5e-18  Score=87.51  Aligned_cols=73  Identities=27%  Similarity=0.616  Sum_probs=66.1

Q ss_pred             CCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCc--cccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         25 CVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        25 ~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      ..++|.|..  |++.|.....|..|++ .|.+.++|.|.  .|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   88 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRS   88 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCH
Confidence            467899996  9999999999999994 89999999996  6999999999999999999999999999999999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=4.2e-18  Score=88.83  Aligned_cols=74  Identities=23%  Similarity=0.590  Sum_probs=68.5

Q ss_pred             cCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHh---cCCCCCeecCCCccccCCC
Q psy14147         24 YCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQR---HDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        24 ~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~---~~~~~~~~C~~C~~~f~~~   98 (100)
                      .+.++|.|..|++.|.....|..|+ ..|.++++|.|+.|++.|.....|..|++.   +.++++|.|+.|++.|.+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHH-HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHH-HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            4678999999999999999999999 489999999999999999999999999985   5788999999999999864

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.8e-18  Score=83.64  Aligned_cols=71  Identities=23%  Similarity=0.374  Sum_probs=62.4

Q ss_pred             HHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCC-CCccCccccccccChhHHHHHHHhcCC-CCC
Q psy14147         15 VVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND-RRYQCDLCLARFVTNSSLIVHKQRHDN-TPR   85 (100)
Q Consensus        15 ~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~~~c~~c~~~~~~~~~l~~h~~~~~~-~~~   85 (100)
                      .|.+|+++|.+++||.|.+|++.|.....|..|+...|.+. ++|.|+.|++.|.....|..|++.+++ +.|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            46789999999999999999999999999999985467764 899999999999999999999997554 444

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=6.2e-19  Score=88.72  Aligned_cols=76  Identities=12%  Similarity=0.228  Sum_probs=67.0

Q ss_pred             HHHHHHHHHhccccccCCCceeCchhhhhc-cChhHHHHHHhhhcCCCCCccCccccccccChhHHHHH-HHhcCCCCCe
Q psy14147          9 MEIQKDVVQSFPIILYCVKPYACEECGKAF-RKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVH-KQRHDNTPRF   86 (100)
Q Consensus         9 ~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f-~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~~~~~   86 (100)
                      +|...+.|..|++.+.++++|.|+.|++.| .....|..|++ .| ++++|.|.+|++.|.....|..| ++.|+++..+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME-NC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHH-HH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHH-HH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            345567788888888899999999999999 99999999995 88 99999999999999999999999 8889865433

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.74  E-value=2e-19  Score=93.99  Aligned_cols=83  Identities=24%  Similarity=0.473  Sum_probs=72.6

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCc--cccccccChhHHHHHHH
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQ   78 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~   78 (100)
                      +..++..|.....|..|++.|.++++|.|..  |++.|.....|..|+ ..|.++++|.|+  .|++.|.....|..|++
T Consensus        37 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           37 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHH-HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             CCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCCCCceECCCCCCCCccCCHHHHHHHHH
Confidence            4567888999999999999999999999986  999999999999999 489999999996  59999999999999999


Q ss_pred             hcCCCCCe
Q psy14147         79 RHDNTPRF   86 (100)
Q Consensus        79 ~~~~~~~~   86 (100)
                      +|++++++
T Consensus       116 ~H~~~k~~  123 (124)
T 1ubd_C          116 THAKAKNN  123 (124)
T ss_dssp             HHC-----
T ss_pred             HHcccccC
Confidence            99998876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.3e-19  Score=89.28  Aligned_cols=80  Identities=23%  Similarity=0.363  Sum_probs=72.7

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCC--CCccCccccccccChhHHHHHHH-h
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND--RRYQCDLCLARFVTNSSLIVHKQ-R   79 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~--~~~~c~~c~~~~~~~~~l~~h~~-~   79 (100)
                      +..++..|.....|..|++.|.++++|.|..|++.|.....|..|++ .|.+.  ++|.|..|++.|.....|..|++ .
T Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   88 (95)
T 2yt9_A           10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV   88 (95)
T ss_dssp             CSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHH-HHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHT
T ss_pred             CCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH-HhcCCCCCceECCCccchhCCHHHHHHHHHHh
Confidence            45677888899999999999999999999999999999999999994 88876  89999999999999999999986 6


Q ss_pred             cCCC
Q psy14147         80 HDNT   83 (100)
Q Consensus        80 ~~~~   83 (100)
                      |.++
T Consensus        89 H~~~   92 (95)
T 2yt9_A           89 HSGP   92 (95)
T ss_dssp             SCCC
T ss_pred             cCCC
Confidence            7764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.74  E-value=8.8e-20  Score=90.39  Aligned_cols=71  Identities=21%  Similarity=0.502  Sum_probs=61.6

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      ++||.|.+|++.|.....|..|++ .|.++++|.|..|++.|.....|..|++.|++ .+|.|+.|++.|.+.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~   71 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKN   71 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHH
Confidence            478999999999999999999984 88888899999999999999999999988874 788999999888653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6e-18  Score=80.86  Aligned_cols=65  Identities=42%  Similarity=0.687  Sum_probs=60.5

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +.++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++.|+++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            567888999999999999999999999999 48999999999999999999999999999998763

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.6e-18  Score=80.26  Aligned_cols=64  Identities=23%  Similarity=0.417  Sum_probs=59.9

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCe
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      ++.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++.|++++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            467889999999999999999999999 4899999999999999999999999999999998875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=1.4e-20  Score=90.05  Aligned_cols=71  Identities=13%  Similarity=0.188  Sum_probs=64.4

Q ss_pred             HHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         13 KDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        13 ~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      +..|..|+++|.+++||.|.+|++.|.....|..        +++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3568899999999999999999999998876533        6799999999999999999999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=9.2e-19  Score=88.35  Aligned_cols=77  Identities=25%  Similarity=0.452  Sum_probs=71.9

Q ss_pred             hHHHHHHHHHHHHhccccccCCCceeCc--hhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          5 SREVMEIQKDVVQSFPIILYCVKPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         5 ~~~~~~~~~~~l~~h~~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      .++..|.....|..|++.|.++++|.|.  .|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++.|++
T Consensus        22 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           22 GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHH-HHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            4788899999999999999999999996  6999999999999999 589999999999999999999999999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=7.2e-19  Score=90.24  Aligned_cols=77  Identities=25%  Similarity=0.476  Sum_probs=72.2

Q ss_pred             hHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147          5 SREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus         5 ~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      .++..|.....|..|++.|.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++.|..
T Consensus        14 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           14 QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHH-HHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            57888999999999999999999999999999999999999999 589999999999999999999999999998764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.71  E-value=1.2e-18  Score=86.17  Aligned_cols=75  Identities=27%  Similarity=0.441  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHhccccccCCCceeCc--hhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcC
Q psy14147          6 REVMEIQKDVVQSFPIILYCVKPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus         6 ~~~~~~~~~~l~~h~~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      ++..|.....|..|++.|.++++|.|.  .|++.|.....|..|+ ..|.++++|.|+.|++.|.....|..|++.|.
T Consensus        13 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           13 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             TCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            788899999999999999999999997  6999999999999999 58999999999999999999999999998873

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=3.7e-18  Score=78.85  Aligned_cols=45  Identities=24%  Similarity=0.521  Sum_probs=42.7

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTV   99 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~   99 (100)
                      ++||.|.+|++.|.....|..|+++|++++||.|+.||+.|.+.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~   46 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQS   46 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHH
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHH
Confidence            689999999999999999999999999999999999999998753

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.9e-17  Score=76.69  Aligned_cols=62  Identities=18%  Similarity=0.433  Sum_probs=56.2

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhc-CCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVH-LNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~-~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      ++|.+++||.|..|++.|.....|..|++..| .++++|.|+.|++.|.....|..|++.+++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            57888999999999999999999999995337 688999999999999999999999998875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.69  E-value=1.3e-17  Score=81.73  Aligned_cols=67  Identities=37%  Similarity=0.698  Sum_probs=55.6

Q ss_pred             ceeC--chhhhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChhHHHHHHHhcCCCCCeecCC---CccccCCC
Q psy14147         28 PYAC--EECGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNTPRFKCKL---CPKMFTNT   98 (100)
Q Consensus        28 ~~~c--~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~---C~~~f~~~   98 (100)
                      ||.|  ..|++.|.....|..|+ ..|.++++|.|+.  |++.|.....|..|++.|++   |.|+.   |++.|.+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~   74 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTW   74 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSH
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCH
Confidence            5788  88888888888888888 4788888888877  88888888888888888887   88888   88888754

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=8.4e-17  Score=79.10  Aligned_cols=63  Identities=22%  Similarity=0.392  Sum_probs=56.1

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHH-HhcCCCC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHK-QRHDNTP   84 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~-~~~~~~~   84 (100)
                      ..+...++|.|++|++.|.....|..|++ .|.+++||.|.+|++.|.....|..|+ +.|++|.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34556788999999999999999999994 899999999999999999999999996 4687763

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=2.9e-18  Score=88.60  Aligned_cols=86  Identities=13%  Similarity=0.042  Sum_probs=74.3

Q ss_pred             cchHHHHHHHHHHHHhcccc--ccCCCcee-Cchhhhhc--cChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHH
Q psy14147          3 VRSREVMEIQKDVVQSFPII--LYCVKPYA-CEECGKAF--RKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHK   77 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~--~~~~~~~~-c~~C~~~f--~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~   77 (100)
                      +..++..|.....|..|++.  |...+++. |..|++.|  .....|..|+ ..|.++++|.|.+|++.|.....|..|+
T Consensus        22 C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~  100 (115)
T 2dmi_A           22 CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKVLKCMYCGHSFESLQDLSVHM  100 (115)
T ss_dssp             BSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSSCBCSSSCCBCSSHHHHHHHH
T ss_pred             CCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCCcceECCCCCCccCCHHHHHHHH
Confidence            45678889999999999998  66666654 99999999  8889999999 5899999999999999999999999999


Q ss_pred             HhcCCCCCeecC
Q psy14147         78 QRHDNTPRFKCK   89 (100)
Q Consensus        78 ~~~~~~~~~~C~   89 (100)
                      +.|........+
T Consensus       101 ~~hh~~~~~~~~  112 (115)
T 2dmi_A          101 IKTKHYQKVSGP  112 (115)
T ss_dssp             HHTTTTTCSCCC
T ss_pred             HHhCCcccCCCC
Confidence            998876655444

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.65  E-value=1e-16  Score=73.12  Aligned_cols=57  Identities=32%  Similarity=0.684  Sum_probs=49.2

Q ss_pred             CCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         25 CVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        25 ~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +++||.|..|++.|.....|..|++ .|.++++|.|+.|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLR-THTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHH-HHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHH-HcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            3678999999999999999999994 89999999999999999999999999998763

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.65  E-value=2.2e-16  Score=72.01  Aligned_cols=56  Identities=32%  Similarity=0.616  Sum_probs=52.7

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      ||.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            689999999999999999999 48999999999999999999999999999998875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=4.5e-16  Score=75.25  Aligned_cols=66  Identities=30%  Similarity=0.459  Sum_probs=58.1

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCC---CCCccCccccccccChhHHHHHH-HhcCCCCCeec
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLN---DRRYQCDLCLARFVTNSSLIVHK-QRHDNTPRFKC   88 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~---~~~~~c~~c~~~~~~~~~l~~h~-~~~~~~~~~~C   88 (100)
                      .|.+++||.|.+|++.|.....|..|++ .|.+   +++|.|..|++.|.....|..|+ ..|.++++...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHH-HHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHH-HhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            3678999999999999999999999995 7875   78999999999999999999999 46777776543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.62  E-value=5.6e-16  Score=77.42  Aligned_cols=63  Identities=16%  Similarity=0.220  Sum_probs=57.4

Q ss_pred             CceeCchhhhhccChhHHHHHHhhh-cCCCCC--------ccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHV-HLNDRR--------YQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~-~~~~~~--------~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      ..+.|..|++.|.....|..|++ . |.+.++        |.|..|++.|.....|..|+++|++++||.|+.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~-~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVT-MEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHH-HTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCCcccccccccCCHHHHHHHHH-HhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            34679999999999999999995 6 888877        899999999999999999999999999999863

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.61  E-value=2.1e-16  Score=83.06  Aligned_cols=68  Identities=19%  Similarity=0.389  Sum_probs=46.1

Q ss_pred             HHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         12 QKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        12 ~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ....|..|+ .|.+++||.|.+|++.|.....|..|++ .|  ++||.|..|++.|.....|..|++.|++.
T Consensus        59 ~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           59 ESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIR-YT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             THHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHH-HT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHH-HC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            345555555 4566677777777777777777777773 55  56677777777777777777777777654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.61  E-value=4e-17  Score=79.95  Aligned_cols=74  Identities=20%  Similarity=0.300  Sum_probs=68.4

Q ss_pred             chHHHHHHHHHHHHhccccccCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCcc---ccccccChhHHHHHHH
Q psy14147          4 RSREVMEIQKDVVQSFPIILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL---CLARFVTNSSLIVHKQ   78 (100)
Q Consensus         4 ~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~---c~~~~~~~~~l~~h~~   78 (100)
                      ..++..|.....|..|+++|.+++||.|..  |++.|.....|..|++ .|.+   |.|..   |++.|.....|..|++
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~---~~C~~~~~C~~~f~~~~~l~~H~~   82 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG---YPCKKDDSCSFVGKTWTLYLKHVA   82 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHS---EECCSCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHH-HhCC---CCCCCCCCCCCccCCHHHHHHHHH
Confidence            567888999999999999999999999988  9999999999999994 8887   89999   9999999999999998


Q ss_pred             hcC
Q psy14147         79 RHD   81 (100)
Q Consensus        79 ~~~   81 (100)
                      .|+
T Consensus        83 ~hh   85 (85)
T 2j7j_A           83 ECH   85 (85)
T ss_dssp             HCC
T ss_pred             hcC
Confidence            774

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.4e-15  Score=72.64  Aligned_cols=67  Identities=25%  Similarity=0.647  Sum_probs=56.2

Q ss_pred             HHHHhcc-ccccCCCceeCc--hhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcC
Q psy14147         14 DVVQSFP-IILYCVKPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        14 ~~l~~h~-~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      ..+..|. ..+.++++|.|.  .|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHH-HhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3445554 467788999997  6999999999999999 48999999999999999999999999998874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.8e-15  Score=69.66  Aligned_cols=56  Identities=34%  Similarity=0.720  Sum_probs=51.5

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHH-HhcCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHK-QRHDNT   83 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~-~~~~~~   83 (100)
                      +||.|..|++.|.....|..|++ .|.++++|.|+.|++.|.....|..|+ +.|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            57999999999999999999994 899999999999999999999999996 678765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=8.8e-17  Score=77.87  Aligned_cols=63  Identities=22%  Similarity=0.382  Sum_probs=58.4

Q ss_pred             hHHHHHHHHHHHHhccc-cccCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCcccccccc
Q psy14147          5 SREVMEIQKDVVQSFPI-ILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFV   68 (100)
Q Consensus         5 ~~~~~~~~~~~l~~h~~-~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~   68 (100)
                      .++..|.....|..|++ .|.++++|.|..  |++.|.....|..|++ .|.++++|.|.+|++.|.
T Consensus        14 ~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           14 GCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             TTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCCSSSCCCC
T ss_pred             CCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCCCCCeeCCCCCCCCC
Confidence            47888999999999998 799999999999  9999999999999994 899999999999999873

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.58  E-value=2.2e-15  Score=68.07  Aligned_cols=48  Identities=19%  Similarity=0.264  Sum_probs=39.6

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHH-hcCCCCCeecCCCccccCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQ-RHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .+.++++|.|..|++.|.....|..|++ .|++++||.|+.|++.|+++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            4567788888888888888888888886 88888888888888888753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.56  E-value=9.2e-18  Score=83.04  Aligned_cols=77  Identities=18%  Similarity=0.149  Sum_probs=69.4

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      +..++..|.....|..|+++|.+++||.|..|++.|.....|..|++ .|.+ .++.|..|++.|.....|..|++..+
T Consensus         6 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C            6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHI-LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHH-HHTH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHH-HhCC-CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            45678889999999999999999999999999999999999999995 6663 78999999999999999999998543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.56  E-value=1.4e-15  Score=74.67  Aligned_cols=48  Identities=21%  Similarity=0.459  Sum_probs=44.4

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .+.+.+++.|++|++.|.....|..|+++|++++||.|+.|++.|.+.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   69 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS   69 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSH
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCH
Confidence            456677899999999999999999999999999999999999999865

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.6e-15  Score=75.42  Aligned_cols=61  Identities=16%  Similarity=0.197  Sum_probs=54.4

Q ss_pred             hhccChhHHHHHHhhhcCCCCCccCccccccc-cChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         36 KAFRKKFSLTMHQRHVHLNDRRYQCDLCLARF-VTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        36 ~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~-~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      ..|.....+..|+ ..+.+.++|.|+.|++.| .....|..|++.| +++||.|..||+.|.+.
T Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~   75 (96)
T 2ctd_A           14 PVYAAGSLEEQWY-LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSL   75 (96)
T ss_dssp             CSSCTTCHHHHHH-HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSH
T ss_pred             CCCCCchHHHHHH-HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCH
Confidence            3566677788888 478889999999999999 9999999999999 99999999999999864

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.54  E-value=3.3e-16  Score=82.30  Aligned_cols=71  Identities=23%  Similarity=0.255  Sum_probs=60.6

Q ss_pred             CCCceeCchhhhhcc------ChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         25 CVKPYACEECGKAFR------KKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        25 ~~~~~~c~~C~~~f~------~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .++++.|++|.+.|.      ....|..|+  .|.+++||.|..|++.|.....|..|++.|  ++||.|+.|++.|.+.
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~  113 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST  113 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCH
Confidence            456788999888776      556666676  488899999999999999999999999998  8999999999999875


Q ss_pred             C
Q psy14147         99 V   99 (100)
Q Consensus        99 ~   99 (100)
                      +
T Consensus       114 ~  114 (129)
T 2wbt_A          114 D  114 (129)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=7.5e-15  Score=68.85  Aligned_cols=60  Identities=22%  Similarity=0.206  Sum_probs=54.2

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc-cccccccChhHHHHHHHhcCCCCC
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD-LCLARFVTNSSLIVHKQRHDNTPR   85 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~-~c~~~~~~~~~l~~h~~~~~~~~~   85 (100)
                      ..+.+||.|..|++.|. ...|..|++ . .+++||.|. .|++.|.....|..|++.|...+|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQY-Q-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHH-H-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHH-H-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35678999999999999 999999995 6 889999999 999999999999999999877665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.52  E-value=3.9e-15  Score=67.79  Aligned_cols=45  Identities=22%  Similarity=0.497  Sum_probs=39.5

Q ss_pred             CCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         54 NDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        54 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      |+++|.|..|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   45 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQK   45 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCH
Confidence            457899999999999999999999999999999999999999864

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=9.9e-15  Score=69.51  Aligned_cols=49  Identities=29%  Similarity=0.617  Sum_probs=46.0

Q ss_pred             hhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         50 HVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        50 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~   55 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN   55 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCH
Confidence            3688899999999999999999999999999999999999999999864

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.3e-14  Score=63.36  Aligned_cols=45  Identities=33%  Similarity=0.462  Sum_probs=24.7

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            3555555555555555555555555555555 25555555555543

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=1.4e-14  Score=63.28  Aligned_cols=44  Identities=27%  Similarity=0.424  Sum_probs=22.2

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            444555555555555555555555555555 24555555555443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.51  E-value=1.3e-14  Score=63.31  Aligned_cols=45  Identities=31%  Similarity=0.376  Sum_probs=25.1

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3555555555555555555555555555555 35555555555543

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.5e-14  Score=63.15  Aligned_cols=44  Identities=25%  Similarity=0.353  Sum_probs=23.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            455555555555555555555555555555 25555555555443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.4e-14  Score=63.19  Aligned_cols=45  Identities=33%  Similarity=0.510  Sum_probs=25.0

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3555555555555555555555555555555 25555555555543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=8.5e-15  Score=63.96  Aligned_cols=45  Identities=27%  Similarity=0.403  Sum_probs=24.9

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|++|++.|.....|..|+ ..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHH-HHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            3555555555555555555555555555555 25555555555543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.50  E-value=1.2e-14  Score=63.54  Aligned_cols=41  Identities=20%  Similarity=0.336  Sum_probs=21.2

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|.+|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.4e-14  Score=63.20  Aligned_cols=43  Identities=33%  Similarity=0.457  Sum_probs=22.4

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSS   45 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            445555555555555555555555555555 2455555555543

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.5e-14  Score=63.13  Aligned_cols=45  Identities=31%  Similarity=0.405  Sum_probs=24.6

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|++|++.|.....|..|+ ..|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3555555555555555555555555555555 25555555555543

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.50  E-value=1.3e-14  Score=63.31  Aligned_cols=43  Identities=26%  Similarity=0.381  Sum_probs=21.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|+.|++.|.....|..|+ ..|.+++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCC
Confidence            444444455555555555555555555554 2444444444443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.3e-14  Score=63.37  Aligned_cols=44  Identities=20%  Similarity=0.271  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SG-SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CC-cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.5e-14  Score=63.10  Aligned_cols=41  Identities=17%  Similarity=0.294  Sum_probs=21.1

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.6e-14  Score=63.05  Aligned_cols=44  Identities=30%  Similarity=0.400  Sum_probs=21.8

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444455555555555555555555555555 24555555554443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.50  E-value=1.7e-14  Score=62.95  Aligned_cols=45  Identities=29%  Similarity=0.414  Sum_probs=25.0

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3555555555555555555555555555555 35555555555543

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.4e-14  Score=63.19  Aligned_cols=45  Identities=27%  Similarity=0.350  Sum_probs=42.2

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            5889999999999999999999999999999 58999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.2e-14  Score=63.50  Aligned_cols=45  Identities=20%  Similarity=0.319  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSG-SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             Ccc-CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.7e-14  Score=62.97  Aligned_cols=44  Identities=32%  Similarity=0.471  Sum_probs=23.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            455555555555555555555555555555 24555555555443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.8e-14  Score=62.87  Aligned_cols=44  Identities=32%  Similarity=0.470  Sum_probs=24.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            455555555555555555555555555555 35555555555543

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.8e-14  Score=62.27  Aligned_cols=43  Identities=28%  Similarity=0.347  Sum_probs=21.5

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQ-QTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHH-HHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            344445555555555555555555555555 2455555555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.7e-14  Score=62.99  Aligned_cols=45  Identities=27%  Similarity=0.348  Sum_probs=25.3

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3555555555555555555555555555555 35555555555544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.50  E-value=1.3e-14  Score=63.38  Aligned_cols=41  Identities=20%  Similarity=0.270  Sum_probs=20.7

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444555555555555555555555555555555555443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.50  E-value=1.6e-14  Score=63.10  Aligned_cols=45  Identities=36%  Similarity=0.473  Sum_probs=42.3

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            6889999999999999999999999999999 58999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.9e-14  Score=62.75  Aligned_cols=45  Identities=29%  Similarity=0.338  Sum_probs=25.6

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|++|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3555555555666666666666655565565 35555555555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.3e-14  Score=63.36  Aligned_cols=44  Identities=20%  Similarity=0.297  Sum_probs=41.3

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CS-SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CC-CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66 478999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.5e-14  Score=63.17  Aligned_cols=45  Identities=29%  Similarity=0.423  Sum_probs=25.2

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHH-HHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3555555555555555555555555555555 25555555555543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2e-14  Score=62.73  Aligned_cols=43  Identities=33%  Similarity=0.487  Sum_probs=22.1

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            444555555555555555555555555555 2455555555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.5e-14  Score=63.16  Aligned_cols=45  Identities=31%  Similarity=0.474  Sum_probs=28.9

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4566666666666666666666666666666 36666666666554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.4e-14  Score=63.21  Aligned_cols=44  Identities=23%  Similarity=0.363  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SG-SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SS-SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CC-CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66 478999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2e-14  Score=62.74  Aligned_cols=44  Identities=32%  Similarity=0.438  Sum_probs=23.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            455555555555555555555555555555 25555555555443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.5e-14  Score=63.10  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=20.0

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444555555555444555555445555555554443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=62.82  Aligned_cols=45  Identities=31%  Similarity=0.423  Sum_probs=25.6

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCCCC
Confidence            3555555555666666666666655565565 25555555555543

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.5e-14  Score=63.17  Aligned_cols=41  Identities=15%  Similarity=0.206  Sum_probs=21.5

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.5e-14  Score=63.17  Aligned_cols=41  Identities=15%  Similarity=0.198  Sum_probs=20.4

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444455555555555555555555555555555555443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.9e-14  Score=68.11  Aligned_cols=48  Identities=19%  Similarity=0.371  Sum_probs=44.9

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .+.++++|.|..|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~   50 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQP   50 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCH
Confidence            467889999999999999999999999999999999999999999864

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.49  E-value=2.2e-14  Score=62.59  Aligned_cols=44  Identities=34%  Similarity=0.434  Sum_probs=24.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            455555555555555555555555555555 25555555555443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.8e-14  Score=62.87  Aligned_cols=41  Identities=24%  Similarity=0.303  Sum_probs=20.5

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444455555555555555555555555555555555443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.1e-14  Score=62.69  Aligned_cols=43  Identities=33%  Similarity=0.481  Sum_probs=22.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            445555555555555555555555555555 2455555555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.49  E-value=1.1e-15  Score=71.01  Aligned_cols=48  Identities=10%  Similarity=0.223  Sum_probs=22.8

Q ss_pred             HhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcccccccc
Q psy14147         17 QSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFV   68 (100)
Q Consensus        17 ~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~   68 (100)
                      ..|+++|.+++||.|+.|++.|.....|.    ..|.+++||.|..|++.|.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~   50 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCE
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccc
Confidence            34455555555555555555554444332    1344444444444444443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.49  E-value=1.4e-14  Score=63.24  Aligned_cols=45  Identities=18%  Similarity=0.242  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSG-SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCc-CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.3e-14  Score=63.34  Aligned_cols=45  Identities=18%  Similarity=0.268  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSG-SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCc-CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.2e-14  Score=62.87  Aligned_cols=44  Identities=20%  Similarity=0.327  Sum_probs=40.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         1 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GS-SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CC-CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CC-CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44 378899999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.49  E-value=1.2e-14  Score=63.39  Aligned_cols=45  Identities=22%  Similarity=0.310  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSG-SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccc-cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=62.77  Aligned_cols=45  Identities=27%  Similarity=0.351  Sum_probs=42.2

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5889999999999999999999999999999 58999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.7e-14  Score=62.90  Aligned_cols=41  Identities=20%  Similarity=0.309  Sum_probs=20.9

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44444555555555555555555555555555555555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=62.76  Aligned_cols=45  Identities=33%  Similarity=0.457  Sum_probs=42.3

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            6889999999999999999999999999999 59999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.3e-14  Score=62.56  Aligned_cols=44  Identities=32%  Similarity=0.442  Sum_probs=23.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            455555555555555555555555555555 25555555555443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.7e-14  Score=63.01  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=23.3

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.5e-14  Score=63.15  Aligned_cols=44  Identities=39%  Similarity=0.477  Sum_probs=23.5

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            455555555555555555555555555555 24555555555443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.3e-14  Score=63.38  Aligned_cols=44  Identities=16%  Similarity=0.273  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SG-SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cc-cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66 478999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.2e-14  Score=63.44  Aligned_cols=45  Identities=20%  Similarity=0.244  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSG-SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             Ccc-cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.6e-14  Score=63.06  Aligned_cols=45  Identities=29%  Similarity=0.351  Sum_probs=42.2

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5889999999999999999999999999999 58999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.2e-14  Score=63.40  Aligned_cols=45  Identities=18%  Similarity=0.260  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSG-SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCC-CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.5e-14  Score=62.41  Aligned_cols=45  Identities=27%  Similarity=0.437  Sum_probs=42.0

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4888999999999999999999999999999 59999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.5e-14  Score=63.16  Aligned_cols=44  Identities=32%  Similarity=0.403  Sum_probs=22.4

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444555555555555555555555555555 24555555555443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.49  E-value=2.1e-14  Score=62.68  Aligned_cols=45  Identities=27%  Similarity=0.466  Sum_probs=42.2

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|++ .|.+++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHH-HHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            58899999999999999999999999999994 8999999999876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2.2e-14  Score=62.55  Aligned_cols=43  Identities=37%  Similarity=0.464  Sum_probs=21.5

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            444455555555555555555555555555 2455555555444

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=2e-14  Score=62.72  Aligned_cols=45  Identities=20%  Similarity=0.267  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSG-SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSS-CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             Ccc-cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 479999999999999999999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2.7e-14  Score=62.32  Aligned_cols=44  Identities=16%  Similarity=0.283  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SG-SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CC-CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.6e-14  Score=63.01  Aligned_cols=41  Identities=20%  Similarity=0.310  Sum_probs=20.5

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44444455555555555555555555555555555555443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.8e-14  Score=62.81  Aligned_cols=45  Identities=33%  Similarity=0.467  Sum_probs=42.3

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            5889999999999999999999999999999 58999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.9e-14  Score=62.77  Aligned_cols=45  Identities=18%  Similarity=0.271  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|+.|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSG-SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCC-CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.7e-14  Score=63.00  Aligned_cols=44  Identities=16%  Similarity=0.227  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SG-SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CC-CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Cc-cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.3e-14  Score=63.35  Aligned_cols=45  Identities=18%  Similarity=0.149  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|.+|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSG-SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCc-CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.7e-14  Score=62.90  Aligned_cols=44  Identities=18%  Similarity=0.267  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SG-SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             Cc-ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.9e-14  Score=62.81  Aligned_cols=45  Identities=20%  Similarity=0.311  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSG-SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CST-TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             Ccc-cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 489999999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.6e-14  Score=62.36  Aligned_cols=45  Identities=36%  Similarity=0.490  Sum_probs=26.9

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|++ .|.+++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHH-HHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHH-HcCCCCCCCCCCC
Confidence            35556666666666666666666666666663 5666666666544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.5e-14  Score=63.10  Aligned_cols=44  Identities=20%  Similarity=0.244  Sum_probs=41.1

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SG-SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CC-cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.5e-15  Score=76.44  Aligned_cols=59  Identities=19%  Similarity=0.200  Sum_probs=52.2

Q ss_pred             cChhHHHHHHhhhcCCCCCccCcccccccc-ChhHHHHHHHhcCC-CCCeecCCCccccCCC
Q psy14147         39 RKKFSLTMHQRHVHLNDRRYQCDLCLARFV-TNSSLIVHKQRHDN-TPRFKCKLCPKMFTNT   98 (100)
Q Consensus        39 ~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~-~~~~l~~h~~~~~~-~~~~~C~~C~~~f~~~   98 (100)
                      .....+..|+ ..|.+.++|.|..|++.|. ....|..|++.|++ ++||.|..|++.|.+.
T Consensus         7 ~~~~~~~~h~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~   67 (98)
T 2gqj_A            7 GPGGPEEQWQ-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSK   67 (98)
T ss_dssp             CCCCSCSHHH-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCH
T ss_pred             CCCCcHHHHH-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCH
Confidence            3344566788 4899999999999999999 99999999999998 9999999999999865

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.48  E-value=1.6e-14  Score=63.00  Aligned_cols=45  Identities=22%  Similarity=0.313  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSG-SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSC-SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCc-cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.48  E-value=1.8e-14  Score=62.88  Aligned_cols=44  Identities=18%  Similarity=0.259  Sum_probs=41.3

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SG-SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SC-CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CC-CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66 478999999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.6e-14  Score=63.05  Aligned_cols=44  Identities=30%  Similarity=0.420  Sum_probs=24.2

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            455555555555555555555555555555 25555555555543

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.48  E-value=3e-14  Score=62.76  Aligned_cols=43  Identities=16%  Similarity=0.263  Sum_probs=31.9

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCcc
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPK   93 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   93 (100)
                      .+.++++|.|.+|++.|.....|..|++.|++++||.|+.|+|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3556677777777777777777777777777777777777765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.3e-14  Score=63.40  Aligned_cols=45  Identities=24%  Similarity=0.276  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSG-SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCC-CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCC-CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=2.1e-14  Score=62.65  Aligned_cols=43  Identities=28%  Similarity=0.358  Sum_probs=21.1

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCC
Confidence            444444455555555555555555555554 2444444454443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=2.9e-14  Score=62.22  Aligned_cols=45  Identities=33%  Similarity=0.617  Sum_probs=42.0

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4788999999999999999999999999999 49999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.5e-14  Score=63.17  Aligned_cols=45  Identities=20%  Similarity=0.197  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSG-SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             Ccc-cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.48  E-value=3.5e-14  Score=61.67  Aligned_cols=42  Identities=19%  Similarity=0.339  Sum_probs=32.7

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCc
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCP   92 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   92 (100)
                      .|+++++|.|..|++.|.....|..|++.|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            466777788888888887777888888888888888887775

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.7e-14  Score=62.94  Aligned_cols=44  Identities=18%  Similarity=0.189  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SG-SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cc-ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=5.5e-15  Score=71.25  Aligned_cols=53  Identities=23%  Similarity=0.642  Sum_probs=47.2

Q ss_pred             HHHHhhhcCCCCCccCccccccccChhHHHHHHH-hcCCC-CCeecCCCccccCCC
Q psy14147         45 TMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQ-RHDNT-PRFKCKLCPKMFTNT   98 (100)
Q Consensus        45 ~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~-~~~~C~~C~~~f~~~   98 (100)
                      ..|+ ..|.++++|.|..|++.|.....|..|++ .|.++ ++|.|+.|++.|.+.
T Consensus         4 ~~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~   58 (77)
T 2ct1_A            4 GSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK   58 (77)
T ss_dssp             CCCC-CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSH
T ss_pred             Cccc-cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCH
Confidence            4577 48999999999999999999999999997 67765 899999999999864

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=8.8e-15  Score=68.49  Aligned_cols=49  Identities=24%  Similarity=0.548  Sum_probs=44.9

Q ss_pred             hhcCCCCCccCccccccccChhHHHHHHHh-c-CCCCCeecCCCccccCCC
Q psy14147         50 HVHLNDRRYQCDLCLARFVTNSSLIVHKQR-H-DNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        50 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~-~-~~~~~~~C~~C~~~f~~~   98 (100)
                      ..|.++++|.|..|++.|.....|..|++. | ++++||.|+.|++.|.+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~   53 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRK   53 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCH
Confidence            368889999999999999999999999998 7 589999999999999865

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.5e-14  Score=61.93  Aligned_cols=44  Identities=25%  Similarity=0.272  Sum_probs=23.8

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            455555555555555555555555555555 25555555555443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.48  E-value=3.6e-14  Score=61.91  Aligned_cols=43  Identities=28%  Similarity=0.457  Sum_probs=21.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            344444455555555555555555555554 2444444444443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.4e-14  Score=63.25  Aligned_cols=45  Identities=22%  Similarity=0.318  Sum_probs=41.6

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSG-SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCC-CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.9e-14  Score=62.87  Aligned_cols=41  Identities=22%  Similarity=0.254  Sum_probs=22.1

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.1e-14  Score=62.12  Aligned_cols=44  Identities=39%  Similarity=0.589  Sum_probs=23.5

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            445555555555555555555555555555 25555555555443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.6e-14  Score=63.07  Aligned_cols=44  Identities=14%  Similarity=0.248  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SG-SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CC-CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CC-cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.8e-14  Score=62.87  Aligned_cols=45  Identities=20%  Similarity=0.238  Sum_probs=41.5

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSG-SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCc-ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            356 478999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=3.5e-14  Score=61.92  Aligned_cols=44  Identities=18%  Similarity=0.283  Sum_probs=41.1

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SG-SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CS-SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CC-CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55 478999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.3e-14  Score=62.52  Aligned_cols=44  Identities=20%  Similarity=0.169  Sum_probs=41.1

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SG-SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CS-CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cc-cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.47  E-value=2.5e-14  Score=62.42  Aligned_cols=44  Identities=18%  Similarity=0.261  Sum_probs=41.0

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SG-SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SC-CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CC-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45 478999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.5e-14  Score=61.94  Aligned_cols=44  Identities=34%  Similarity=0.489  Sum_probs=24.7

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQ-KIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHH-TTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            3555555555555555555555555555555 3555555555543

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.4e-14  Score=61.99  Aligned_cols=45  Identities=33%  Similarity=0.430  Sum_probs=42.0

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4888999999999999999999999999999 48999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.3e-14  Score=63.34  Aligned_cols=44  Identities=20%  Similarity=0.302  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CC-CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cC-cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.3e-14  Score=63.33  Aligned_cols=44  Identities=11%  Similarity=0.202  Sum_probs=41.3

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SG-SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CC-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.2e-14  Score=62.61  Aligned_cols=44  Identities=18%  Similarity=0.269  Sum_probs=41.1

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 h~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SG-SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CS-CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CC-CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=5.6e-14  Score=67.17  Aligned_cols=48  Identities=29%  Similarity=0.701  Sum_probs=45.0

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      .+.+.++|.|..|++.|.....|..|++.|++++||.|..|++.|.+.
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~   58 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP   58 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCH
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCH
Confidence            567789999999999999999999999999999999999999999864

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-14  Score=61.91  Aligned_cols=45  Identities=38%  Similarity=0.423  Sum_probs=41.9

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4788999999999999999999999999999 48999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.4e-14  Score=62.48  Aligned_cols=44  Identities=30%  Similarity=0.514  Sum_probs=21.4

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQ-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHH-HHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            344444455555555555555555555554 24444444544443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.9e-14  Score=61.68  Aligned_cols=41  Identities=24%  Similarity=0.319  Sum_probs=22.8

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHH-hcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQ-RHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++ .|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4555555555555555555555555555 5555555555544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5.8e-15  Score=71.17  Aligned_cols=57  Identities=25%  Similarity=0.317  Sum_probs=52.8

Q ss_pred             cchHHHHHHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147          3 VRSREVMEIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      +..++..|.....|..|++.|.+++||.|.+|++.|.....|..|+ ..|.+++||.|
T Consensus        21 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~~C   77 (77)
T 2cot_A           21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPSSG   77 (77)
T ss_dssp             CSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-GGSCCCCCCCC
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            4567888999999999999999999999999999999999999999 59999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.9e-14  Score=61.48  Aligned_cols=44  Identities=14%  Similarity=0.165  Sum_probs=41.0

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SG-SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CC-CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CC-CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45 478999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.1e-14  Score=61.94  Aligned_cols=45  Identities=33%  Similarity=0.374  Sum_probs=42.1

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhh-hcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRH-VHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~-~~~~~~~~~c~~c   63 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ . .|.+++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHW-RYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHH-TTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHh-HhhcCCCCCCCCCCC
Confidence            5889999999999999999999999999999 6 8999999999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.7e-14  Score=61.85  Aligned_cols=45  Identities=18%  Similarity=0.283  Sum_probs=41.2

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSG-SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCC-CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366 478999999999999999999999999999999999999865

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=2.2e-14  Score=68.37  Aligned_cols=55  Identities=25%  Similarity=0.524  Sum_probs=47.3

Q ss_pred             HHHHHhhhcCCCCCccCc--cccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         44 LTMHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        44 l~~h~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      +..|....+.+.++|.|+  .|++.|.....|..|++.|++++||.|+.||+.|.+.
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   62 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS   62 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCH
Confidence            334444567889999997  5999999999999999999999999999999999864

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.6e-14  Score=69.70  Aligned_cols=47  Identities=28%  Similarity=0.591  Sum_probs=44.0

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCC---CCCeecCCCccccCCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDN---TPRFKCKLCPKMFTNT   98 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~---~~~~~C~~C~~~f~~~   98 (100)
                      |+++++|.|.+|++.|.....|..|++.|++   +++|.|+.|++.|.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~   51 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKP   51 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCH
Confidence            6789999999999999999999999999986   8999999999999864

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=6e-14  Score=64.41  Aligned_cols=43  Identities=30%  Similarity=0.737  Sum_probs=40.6

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      +||.|..|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   43 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRR   43 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence            4799999999999999999999999999999999999999864

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.44  E-value=1.1e-13  Score=62.45  Aligned_cols=49  Identities=29%  Similarity=0.542  Sum_probs=44.0

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVT   69 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~   69 (100)
                      ..+.+++||.|.+|++.|.....|..|++..|.++++|.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4567889999999999999999999998438999999999999999865

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.43  E-value=1e-13  Score=62.99  Aligned_cols=42  Identities=26%  Similarity=0.574  Sum_probs=39.9

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      ||.|..|++.|.....|..|++.|++++||.|+.|++.|.+.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   42 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTK   42 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCH
Confidence            689999999999999999999999999999999999999864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.1e-13  Score=60.33  Aligned_cols=42  Identities=31%  Similarity=0.536  Sum_probs=22.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            445555555555555555555555555555 245555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.2e-14  Score=60.94  Aligned_cols=44  Identities=16%  Similarity=0.204  Sum_probs=40.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SG-SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CC-CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999999999865

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.42  E-value=1.5e-13  Score=59.89  Aligned_cols=43  Identities=30%  Similarity=0.467  Sum_probs=25.9

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHH-HHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3555666666666666666666666666666 356666666554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.41  E-value=2.8e-13  Score=64.32  Aligned_cols=59  Identities=27%  Similarity=0.606  Sum_probs=51.0

Q ss_pred             ccccCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCcc--ccccccChhHHHHHHHhc
Q psy14147         21 IILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        21 ~~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~   80 (100)
                      ......++|.|..  |++.|.....|..|+ ..|.++++|.|.+  |++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHH-HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHH-HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4455678899988  999999999999999 4899999999965  999999999999998764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.9e-13  Score=59.58  Aligned_cols=43  Identities=35%  Similarity=0.502  Sum_probs=25.6

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHR-RSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHH-HHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            3555566666666666666666666666666 356666666554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2e-13  Score=59.52  Aligned_cols=43  Identities=35%  Similarity=0.525  Sum_probs=25.1

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3555555566666666666666666666665 355555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.40  E-value=2e-14  Score=66.68  Aligned_cols=51  Identities=16%  Similarity=0.357  Sum_probs=44.5

Q ss_pred             HHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCCC
Q psy14147         45 TMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTV   99 (100)
Q Consensus        45 ~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~   99 (100)
                      ..|+ ..|.+++||.|+.|++.|.....|.   +.|++++||.|+.||+.|...+
T Consensus         3 ~~h~-~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            3 ETDE-RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCCS-SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECT
T ss_pred             hhHH-HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCc
Confidence            3567 4899999999999999999887775   7899999999999999998654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.1e-13  Score=59.35  Aligned_cols=43  Identities=40%  Similarity=0.571  Sum_probs=25.2

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHH-HHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHH-HHcCCCCCCCCC
Confidence            3555555566666666666666666666665 355555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.40  E-value=2.8e-13  Score=57.84  Aligned_cols=41  Identities=34%  Similarity=0.491  Sum_probs=20.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQ-RTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHH-GGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHH-HhcCCCCCCCC
Confidence            344444555555555555555555555555 24554444444

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.7e-13  Score=69.41  Aligned_cols=49  Identities=14%  Similarity=0.274  Sum_probs=44.0

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHH-hc---CCCCCeecCCCccccCCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQ-RH---DNTPRFKCKLCPKMFTNTV   99 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~---~~~~~~~C~~C~~~f~~~~   99 (100)
                      ..+|++||.|..|++.|.....|..|++ .|   ++++||.|..||+.|.+.+
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~   64 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD   64 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTH
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHH
Confidence            4578899999999999999999999998 58   6689999999999998764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.3e-13  Score=59.21  Aligned_cols=43  Identities=33%  Similarity=0.502  Sum_probs=25.6

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCC
Confidence            3555566666666666666666666666666 356666666554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.3e-13  Score=59.29  Aligned_cols=43  Identities=33%  Similarity=0.442  Sum_probs=25.1

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQ-KTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHH-HHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3555555566666666666666666666665 355555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.4e-13  Score=59.23  Aligned_cols=43  Identities=35%  Similarity=0.499  Sum_probs=24.4

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            3555555555566666666665555555555 355555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.1e-13  Score=59.42  Aligned_cols=41  Identities=27%  Similarity=0.429  Sum_probs=23.2

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34555555555555555555555555555555555555544

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.40  E-value=1.6e-13  Score=58.66  Aligned_cols=42  Identities=19%  Similarity=0.342  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         1 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GS-SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CC-SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CC-CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            44 3788999999999999999999999999999999999985

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.1e-13  Score=60.33  Aligned_cols=41  Identities=20%  Similarity=0.210  Sum_probs=28.8

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|.+|++.|.....|..|++.|++++||.|+.|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46666677777777777777777777777777777777665

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.8e-13  Score=59.58  Aligned_cols=42  Identities=29%  Similarity=0.470  Sum_probs=21.4

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCC
Confidence            444555555555555555555555555555 245555555443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.2e-13  Score=58.19  Aligned_cols=38  Identities=21%  Similarity=0.422  Sum_probs=21.1

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44555555555555555555555555555555555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.4e-13  Score=59.19  Aligned_cols=42  Identities=31%  Similarity=0.516  Sum_probs=23.7

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            555555555555555555555555555555 355555555554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=5.3e-14  Score=68.87  Aligned_cols=54  Identities=26%  Similarity=0.499  Sum_probs=47.7

Q ss_pred             HHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCC----CCeecCCCccccCCC
Q psy14147         44 LTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT----PRFKCKLCPKMFTNT   98 (100)
Q Consensus        44 l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~----~~~~C~~C~~~f~~~   98 (100)
                      +..|+ ..|.++++|.|.+|++.|.....|..|++.++++    ++|.|..|++.|.+.
T Consensus         3 ~~~H~-~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~   60 (86)
T 1x6h_A            3 SGSSG-RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR   60 (86)
T ss_dssp             TTCCS-TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCH
T ss_pred             ccccc-ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCH
Confidence            45678 4899999999999999999999999999877765    799999999999864

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.3e-13  Score=59.26  Aligned_cols=43  Identities=33%  Similarity=0.393  Sum_probs=25.6

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      +|+++|.+++||.|..|++.|.....|..|+ ..|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL-RVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHH-HHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3555566666666666666666666666665 356666666554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.2e-13  Score=59.31  Aligned_cols=42  Identities=36%  Similarity=0.508  Sum_probs=21.7

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            445555555555555555555555555555 245555555543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.1e-13  Score=59.34  Aligned_cols=43  Identities=37%  Similarity=0.515  Sum_probs=26.4

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHH-HHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHH-HhcCCCCCCCCC
Confidence            3556666666666666666666666666666 356666666654

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.5e-13  Score=59.11  Aligned_cols=42  Identities=31%  Similarity=0.447  Sum_probs=23.4

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHH-HTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            455555555555555555555555555555 255555555553

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.5e-13  Score=59.12  Aligned_cols=42  Identities=33%  Similarity=0.517  Sum_probs=21.5

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            444555555555555555555555555555 245555555543

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.9e-13  Score=58.96  Aligned_cols=43  Identities=37%  Similarity=0.569  Sum_probs=26.9

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQ-QSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHH-HHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHH-HHcCCCCCCCCC
Confidence            4566666666666666666666666666666 356666666654

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.3e-13  Score=58.17  Aligned_cols=41  Identities=34%  Similarity=0.483  Sum_probs=23.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQ-RTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHH-HHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHH-HHhCCCCCCCC
Confidence            555555555555655655555555555555 25555555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.6e-13  Score=58.62  Aligned_cols=42  Identities=33%  Similarity=0.506  Sum_probs=24.7

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.++++|.|..|++.|.....|..|+ ..|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQ-RIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHH-GGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHH-hHhCCCCCCCCC
Confidence            555555566666666666666666666665 355555555554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3.2e-13  Score=58.24  Aligned_cols=42  Identities=24%  Similarity=0.286  Sum_probs=27.7

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQ-KTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHG-GGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCC
Confidence            4566666666666666666666666666666 36666666665

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.4e-13  Score=59.22  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=19.6

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      .|.++++|.|.+|++.|.....|..|++.|++++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444555555555555555555555555555555443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3e-13  Score=58.87  Aligned_cols=43  Identities=40%  Similarity=0.556  Sum_probs=25.5

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3555566666666666666666666666666 356555565554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2.1e-13  Score=59.40  Aligned_cols=42  Identities=29%  Similarity=0.475  Sum_probs=21.1

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCC
Confidence            444455555555555555555555555555 245555555443

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.7e-13  Score=59.68  Aligned_cols=43  Identities=28%  Similarity=0.368  Sum_probs=39.8

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SG-SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SC-CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             Cc-cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.3e-13  Score=58.72  Aligned_cols=43  Identities=40%  Similarity=0.556  Sum_probs=25.5

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            3555566666666666666666666666666 356556666554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.7e-13  Score=57.89  Aligned_cols=41  Identities=37%  Similarity=0.493  Sum_probs=25.9

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            556666666666666666666666666666 36666666554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.8e-13  Score=59.60  Aligned_cols=43  Identities=23%  Similarity=0.400  Sum_probs=39.8

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SG-SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cc-cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.3e-13  Score=58.78  Aligned_cols=42  Identities=29%  Similarity=0.397  Sum_probs=22.2

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            445555555555555555555555555555 245555555543

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.4e-13  Score=59.18  Aligned_cols=43  Identities=21%  Similarity=0.292  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SG-SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.7e-13  Score=59.04  Aligned_cols=41  Identities=29%  Similarity=0.405  Sum_probs=19.7

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCC
Confidence            444444444455555555554444444444 24444444444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.38  E-value=2e-13  Score=59.49  Aligned_cols=44  Identities=16%  Similarity=0.262  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSG-SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCC-CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 47899999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=3.7e-13  Score=58.04  Aligned_cols=41  Identities=17%  Similarity=0.333  Sum_probs=22.7

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHE-RTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHH-HHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHh-HhcCCCCCCCC
Confidence            455555555555555555555555555555 25555555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.3e-13  Score=59.23  Aligned_cols=43  Identities=21%  Similarity=0.340  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CC-cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.3e-13  Score=58.76  Aligned_cols=44  Identities=32%  Similarity=0.393  Sum_probs=40.6

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            4889999999999999999999999999999 5899999999863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.1e-13  Score=58.23  Aligned_cols=41  Identities=37%  Similarity=0.572  Sum_probs=21.4

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCC
Confidence            445555555555555555555555555555 24555555544

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.7e-13  Score=58.58  Aligned_cols=44  Identities=32%  Similarity=0.419  Sum_probs=40.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      ++++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            467889999999999999999999999999 58999999999876

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.9e-13  Score=58.37  Aligned_cols=41  Identities=32%  Similarity=0.432  Sum_probs=23.4

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQ-KTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHH-TTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHH-HHcCCCCCCCC
Confidence            555555555566655665555555555555 35555555554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2.7e-13  Score=59.04  Aligned_cols=44  Identities=23%  Similarity=0.339  Sum_probs=40.0

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSG-SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             Ccc-cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            356 47899999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.5e-13  Score=59.17  Aligned_cols=44  Identities=16%  Similarity=0.343  Sum_probs=40.2

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSG-SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCC-CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 47899999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.4e-13  Score=59.19  Aligned_cols=44  Identities=20%  Similarity=0.340  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSG-SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             Ccc-CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            356 47899999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.1e-13  Score=58.79  Aligned_cols=44  Identities=20%  Similarity=0.328  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSG-SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccc-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 47899999999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.9e-13  Score=58.92  Aligned_cols=43  Identities=16%  Similarity=0.293  Sum_probs=39.6

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SG-SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CC-CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CC-CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999963

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.1e-13  Score=56.99  Aligned_cols=42  Identities=26%  Similarity=0.365  Sum_probs=38.7

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHH-HHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            678899999999999999999999999999 489999999873

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.6e-13  Score=59.08  Aligned_cols=43  Identities=19%  Similarity=0.302  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SG-SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CS-CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CC-CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            56 47899999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.6e-13  Score=59.08  Aligned_cols=43  Identities=23%  Similarity=0.403  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SG-SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CC-CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3e-13  Score=58.92  Aligned_cols=43  Identities=21%  Similarity=0.395  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SG-SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             Cc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.9e-13  Score=58.93  Aligned_cols=43  Identities=21%  Similarity=0.378  Sum_probs=39.7

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SG-SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CC-CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CC-cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            66 47899999999999999999999999999999999999963

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.6e-13  Score=59.08  Aligned_cols=43  Identities=21%  Similarity=0.310  Sum_probs=39.6

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CC-cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999863

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.1e-13  Score=58.23  Aligned_cols=42  Identities=24%  Similarity=0.477  Sum_probs=39.0

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SG-SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CS-SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             Cc-cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            56 4789999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.7e-13  Score=58.65  Aligned_cols=42  Identities=36%  Similarity=0.483  Sum_probs=20.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCC
Confidence            344444445555555555555555555554 244444444443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.5e-13  Score=58.53  Aligned_cols=42  Identities=21%  Similarity=0.354  Sum_probs=39.0

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|.+|++.|.....|..|++.|++++||.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SG-SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SC-CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CC-cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            56 4789999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.6e-13  Score=59.14  Aligned_cols=43  Identities=19%  Similarity=0.340  Sum_probs=39.6

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|.+|++.|.....|..|++.|++++||.|+.
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SG-SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CS-SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CC-CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            45 47899999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-13  Score=59.20  Aligned_cols=44  Identities=18%  Similarity=0.286  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSG-SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSC-CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             Ccc-ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 47899999999999999999999999999999999999973

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.9e-13  Score=58.55  Aligned_cols=43  Identities=21%  Similarity=0.344  Sum_probs=39.6

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 h~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SG-SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CC-CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 47899999999999999999999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.6e-13  Score=58.52  Aligned_cols=42  Identities=17%  Similarity=0.326  Sum_probs=39.1

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SG-SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SC-CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             Cc-cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            66 4799999999999999999999999999999999999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.3e-13  Score=58.39  Aligned_cols=41  Identities=37%  Similarity=0.470  Sum_probs=19.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            344444444455555555554444444444 24444444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.9e-13  Score=58.89  Aligned_cols=43  Identities=19%  Similarity=0.333  Sum_probs=39.8

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SG-SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SS-SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CC-cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            66 47899999999999999999999999999999999999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.7e-13  Score=58.21  Aligned_cols=42  Identities=36%  Similarity=0.510  Sum_probs=22.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            455555555555555555555555555555 255555555543

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.9e-13  Score=58.95  Aligned_cols=44  Identities=20%  Similarity=0.334  Sum_probs=40.1

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSG-SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCC-CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             Ccc-cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            366 47899999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.7e-13  Score=58.58  Aligned_cols=44  Identities=18%  Similarity=0.285  Sum_probs=40.0

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSG-SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             Ccc-cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 47899999999999999999999999999999999999963

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=4.4e-13  Score=57.81  Aligned_cols=42  Identities=14%  Similarity=0.320  Sum_probs=38.9

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.+++||.|..|++.|.....|..|++.|++++||.|.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SG-SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CS-CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             Cc-cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            56 4789999999999999999999999999999999999884

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.35  E-value=8.1e-13  Score=56.35  Aligned_cols=41  Identities=27%  Similarity=0.368  Sum_probs=21.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ-RSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHH-HHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHh-hhcCCCCCCCC
Confidence            344455555555555555555555555555 24555555443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=7.3e-13  Score=57.65  Aligned_cols=43  Identities=21%  Similarity=0.397  Sum_probs=39.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 h~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SG-SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CC-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            45 37889999999999999999999999999999999999963

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.9e-13  Score=58.50  Aligned_cols=43  Identities=16%  Similarity=0.298  Sum_probs=39.6

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SG-SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             Cc-cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999963

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=6.6e-13  Score=57.80  Aligned_cols=42  Identities=21%  Similarity=0.247  Sum_probs=24.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCC-CCCccCc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLN-DRRYQCD   61 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~-~~~~~c~   61 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            455555555666666666666655566665 35555 5555553

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.6e-13  Score=56.88  Aligned_cols=41  Identities=27%  Similarity=0.346  Sum_probs=24.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|..|++.|.....|..|++ .|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH-HHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH-HcCCCCCCCC
Confidence            4555555666666666666666666666653 5555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=6.4e-13  Score=56.72  Aligned_cols=41  Identities=29%  Similarity=0.408  Sum_probs=21.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHT-TTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHH-HhcCCCCCCCC
Confidence            444555555555555555555555555555 24555555443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.34  E-value=1.4e-13  Score=62.05  Aligned_cols=50  Identities=12%  Similarity=0.109  Sum_probs=35.7

Q ss_pred             hhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCe
Q psy14147         36 KAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        36 ~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      +.|.....|..|+ ..|.++++|.|..|++.|.....|..|++.|++++||
T Consensus         4 k~~~~~~~l~~h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPR-SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCH-HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHH-HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            3455556666677 3677777777777777777777777777777777776

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=4.2e-13  Score=57.88  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=38.9

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SG-SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CC-SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cc-cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            56 4789999999999999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.34  E-value=5.2e-13  Score=56.97  Aligned_cols=41  Identities=20%  Similarity=0.304  Sum_probs=37.9

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         2 H~-~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SS-GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CC-SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CC-ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45 378899999999999999999999999999999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=8.3e-13  Score=57.20  Aligned_cols=43  Identities=23%  Similarity=0.296  Sum_probs=39.7

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcccc
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCL   64 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~   64 (100)
                      ..|.+++||.|.+|++.|.....|..|+ ..|.++++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHH-HHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHH-HHccCCCCCCCcCCC
Confidence            4678899999999999999999999999 489999999999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3e-13  Score=57.71  Aligned_cols=41  Identities=27%  Similarity=0.430  Sum_probs=38.1

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SS-GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CC-CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             Cc-cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            55 478999999999999999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=6.5e-13  Score=57.28  Aligned_cols=38  Identities=21%  Similarity=0.253  Sum_probs=19.9

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34445555555555555555555555555555555544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.2e-13  Score=58.08  Aligned_cols=43  Identities=21%  Similarity=0.331  Sum_probs=39.6

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SG-SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CC-CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cc-cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56 47899999999999999999999999999999999999963

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.1e-13  Score=58.44  Aligned_cols=43  Identities=28%  Similarity=0.299  Sum_probs=24.4

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      +|+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHH-HHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3555555556666666666666655666665 355555555553

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=1e-12  Score=57.72  Aligned_cols=43  Identities=30%  Similarity=0.487  Sum_probs=39.5

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccc
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLA   65 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~   65 (100)
                      .+..+++|.|.+|++.|.....|..|+ ..|.+++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            466789999999999999999999999 5999999999999975

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.7e-13  Score=57.71  Aligned_cols=42  Identities=38%  Similarity=0.536  Sum_probs=26.7

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQ-KIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTH-HHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHH-HHhCCCCCCCC
Confidence            4566666666666666666666666666666 36666666655

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4e-13  Score=58.51  Aligned_cols=41  Identities=24%  Similarity=0.442  Sum_probs=19.9

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHL-RLHSREKSSGP   43 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHH-HHHHHTTCCCS
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCC
Confidence            444444445555555555555555555554 24444444444

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4.4e-13  Score=57.24  Aligned_cols=41  Identities=20%  Similarity=0.350  Sum_probs=37.9

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SS-GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CC-SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CC-cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45 478899999999999999999999999999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.4e-13  Score=57.59  Aligned_cols=41  Identities=24%  Similarity=0.376  Sum_probs=37.9

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      |+ ..|.+++||.|..|++.|.....|..|++.|++++||.|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SS-GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CC-CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CC-cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45 378899999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=6.3e-13  Score=57.86  Aligned_cols=43  Identities=14%  Similarity=0.259  Sum_probs=39.4

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCC-CCCeecCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN-TPRFKCKL   90 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~-~~~~~C~~   90 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++ ++||.|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SG-SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CC-CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             Cc-cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56 478999999999999999999999999999999 99999863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.3e-13  Score=58.41  Aligned_cols=44  Identities=30%  Similarity=0.412  Sum_probs=40.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            357888999999999999999999999999 58999999999876

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.32  E-value=1.7e-12  Score=55.70  Aligned_cols=39  Identities=18%  Similarity=0.276  Sum_probs=24.4

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            355556666666666666666666666666666666654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.3e-13  Score=58.42  Aligned_cols=42  Identities=19%  Similarity=0.256  Sum_probs=39.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SG-SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CC-SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CC-cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56 4789999999999999999999999999999999999986

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.4e-12  Score=56.17  Aligned_cols=43  Identities=28%  Similarity=0.347  Sum_probs=39.4

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCCC
Confidence            3788899999999999999999999999999 489999999884

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=55.95  Aligned_cols=42  Identities=36%  Similarity=0.424  Sum_probs=24.0

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHH-hHhcCCCCCCC
Confidence            3555555566666666666666666666665 35555555543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.2e-12  Score=61.15  Aligned_cols=46  Identities=17%  Similarity=0.299  Sum_probs=41.7

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC-CCccccCCCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK-LCPKMFTNTV   99 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~-~C~~~f~~~~   99 (100)
                      .-+.+||.|..|++.|. ...|..|+++ ++++||.|+ .||+.|...+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~   51 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVARE   51 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHH
Confidence            34678999999999999 9999999999 999999999 9999998654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.8e-12  Score=54.99  Aligned_cols=38  Identities=24%  Similarity=0.392  Sum_probs=22.7

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeec
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKC   88 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C   88 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            35555566666666666666666666666666666554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.5e-13  Score=58.32  Aligned_cols=43  Identities=21%  Similarity=0.306  Sum_probs=39.5

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      .|+ ..|.++++|.|..|++.|.....|..|++.|++++||.|+
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSG-SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCC-CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccc-cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            366 4789999999999999999999999999999999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2e-12  Score=55.99  Aligned_cols=39  Identities=33%  Similarity=0.589  Sum_probs=19.1

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      ++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C   43 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPS   43 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCS
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCC
Confidence            3444445555555555555555555554 24444444444

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.3e-12  Score=56.42  Aligned_cols=41  Identities=17%  Similarity=0.273  Sum_probs=22.2

Q ss_pred             hcCCCCCccCc--cccccccChhHHHHHHHhcCCCCCeecCCC
Q psy14147         51 VHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTPRFKCKLC   91 (100)
Q Consensus        51 ~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C   91 (100)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455555554  455555555555555555555555555544

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.7e-12  Score=56.20  Aligned_cols=41  Identities=15%  Similarity=0.318  Sum_probs=38.1

Q ss_pred             hhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCC
Q psy14147         50 HVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKL   90 (100)
Q Consensus        50 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~   90 (100)
                      ..|.++++|.|..|++.|.....|..|++.|++++||.|+.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            36888999999999999999999999999999999999963

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.8e-13  Score=57.69  Aligned_cols=42  Identities=17%  Similarity=0.285  Sum_probs=38.8

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|.+|++.|.....|..|++.|++++||.|.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SG-SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CC-CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CC-cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56 4789999999999999999999999999999999999884

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3e-12  Score=55.65  Aligned_cols=39  Identities=21%  Similarity=0.301  Sum_probs=22.9

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++||.|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            455555566666666666666666666666666666554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.7e-12  Score=56.18  Aligned_cols=45  Identities=24%  Similarity=0.273  Sum_probs=41.0

Q ss_pred             hccccccCCCceeCc--hhhhhccChhHHHHHHhhhcCCCCCccCccc
Q psy14147         18 SFPIILYCVKPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRYQCDLC   63 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c   63 (100)
                      .|.++|.+++||.|.  .|++.|.....|..|+ ..|.+++||.|..|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            367889999999998  8999999999999999 58999999999876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.8e-12  Score=55.88  Aligned_cols=42  Identities=24%  Similarity=0.427  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |+ ..|.++++|.|.+|++.|.....|..|++.|++++||.|.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SG-SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CC-cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            56 4789999999999999999999999999999999999763

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.26  E-value=2.3e-13  Score=67.80  Aligned_cols=58  Identities=19%  Similarity=0.231  Sum_probs=52.6

Q ss_pred             cchHHHHHHHHHHHHhcccc-ccCCCc--------eeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147          3 VRSREVMEIQKDVVQSFPII-LYCVKP--------YACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus         3 ~~~~~~~~~~~~~l~~h~~~-~~~~~~--------~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      +..++..|.....|..|+++ |.++++        |.|..|++.|.....|..|++ .|++++||.|.
T Consensus        28 C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   94 (95)
T 2ej4_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-HHHTCCCCSSC
T ss_pred             ccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-hcCCCCCCCCC
Confidence            44678899999999999997 888877        999999999999999999995 89999999986

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.8e-12  Score=54.99  Aligned_cols=43  Identities=16%  Similarity=0.240  Sum_probs=39.0

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      .++.|.+++||.|.+|++.|.....|..|+ ..|.+++||.|.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCCC
Confidence            467888999999999999999999999999 4899999999863

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.23  E-value=8.5e-12  Score=53.46  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=37.4

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      ++|.+++||.|..|++.|.....|..|+ ..|.+++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccCCC
Confidence            5678899999999999999999999999 5899999999863

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.23  E-value=4.6e-13  Score=60.29  Aligned_cols=49  Identities=12%  Similarity=0.071  Sum_probs=43.2

Q ss_pred             HHHHHHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCcc
Q psy14147         10 EIQKDVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQ   59 (100)
Q Consensus        10 ~~~~~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~   59 (100)
                      |.....|..|+++|.+++||.|..|++.|.....|..|+ ..|++++||.
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~   54 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHL-ELRHFAKPGV   54 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHH-HHHTTTSCCC
T ss_pred             cCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHH-HHhccCCCCC
Confidence            445567889999999999999999999999999999999 4899988763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=5.9e-13  Score=63.91  Aligned_cols=67  Identities=13%  Similarity=0.177  Sum_probs=58.6

Q ss_pred             HHHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         14 DVVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        14 ~~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      ..|..|++++.+.+|+.|..|++.|. ...|..|+  .+.+.+|+.|+.|++.|. ...|..|.++++++.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE--DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH--HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH--hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            46788999999999999999999995 88899997  478899999999999877 578999999888753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.1e-11  Score=52.54  Aligned_cols=39  Identities=36%  Similarity=0.583  Sum_probs=35.9

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQC   60 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c   60 (100)
                      ++|.+++||.|.+|++.|.....|..|+ ..|.+++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            5678899999999999999999999999 58999999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.18  E-value=3.2e-11  Score=57.09  Aligned_cols=48  Identities=23%  Similarity=0.488  Sum_probs=42.7

Q ss_pred             hcCCCCCccCcc--ccccccChhHHHHHHHhcCCCCCeecCC--CccccCCC
Q psy14147         51 VHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNTPRFKCKL--CPKMFTNT   98 (100)
Q Consensus        51 ~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~   98 (100)
                      .....++|.|..  |++.|.....|..|++.|++++||.|..  |++.|...
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~   62 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS   62 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSH
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCH
Confidence            345677899988  9999999999999999999999999964  99999864

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=4.9e-11  Score=55.78  Aligned_cols=40  Identities=25%  Similarity=0.337  Sum_probs=32.3

Q ss_pred             hcCCCCCccCcc--ccccccChhHHHHHH-HhcCCCCCeecCC
Q psy14147         51 VHLNDRRYQCDL--CLARFVTNSSLIVHK-QRHDNTPRFKCKL   90 (100)
Q Consensus        51 ~~~~~~~~~c~~--c~~~~~~~~~l~~h~-~~~~~~~~~~C~~   90 (100)
                      ...+++||.|..  |+++|.....|..|+ ++|++++||.|.+
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            356788888864  888888888888886 5888888888865

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.15  E-value=2.7e-11  Score=50.71  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=16.9

Q ss_pred             CCCCccCccccccccChhHHHHHHHhcCCCCCee
Q psy14147         54 NDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFK   87 (100)
Q Consensus        54 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~   87 (100)
                      ++++|.|..|++.|.....|..|++.|++++||.
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            3444555555555555555555555555555443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=8.5e-13  Score=65.18  Aligned_cols=60  Identities=15%  Similarity=0.198  Sum_probs=46.7

Q ss_pred             hccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         18 SFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        18 ~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      .+.++|.+++||.|..|++.|.....|..|+ ..|.+++||.|..|.+    ...|..|.+.|.+
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHL-NIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHH-HHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHH-HHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            3455688899999999999999999999999 4898888999876543    4445556676666

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.05  E-value=1.6e-10  Score=47.62  Aligned_cols=35  Identities=23%  Similarity=0.559  Sum_probs=23.3

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      |+++|.+++||.|..|++.|.....|..|++ .|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHH-Hhcc
Confidence            5666666777777777777777777777763 5544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.05  E-value=1.8e-10  Score=48.08  Aligned_cols=38  Identities=29%  Similarity=0.469  Sum_probs=33.3

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |.+++||.|..|++.|.....|..|+ ..|.++++|.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHM-NVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHH-HTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHH-HHcCCCccceec
Confidence            45789999999999999999999999 599999998753

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.04  E-value=2.2e-10  Score=46.55  Aligned_cols=33  Identities=27%  Similarity=0.542  Sum_probs=17.3

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      |.++++|.|..|++.|.....|..|++.|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344455555555555555555555555555544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=2e-10  Score=53.73  Aligned_cols=41  Identities=27%  Similarity=0.367  Sum_probs=35.7

Q ss_pred             cccCCCceeCch--hhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         22 ILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        22 ~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      .+.++|||.|..  |+++|....+|..|++..|++++|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            456899999975  99999999999999744899999998864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.02  E-value=2.7e-10  Score=46.36  Aligned_cols=32  Identities=28%  Similarity=0.584  Sum_probs=15.1

Q ss_pred             CCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         53 LNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        53 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      .++++|.|..|++.|.....|..|++.|++++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            34444444444444444444444444444443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.3e-10  Score=47.12  Aligned_cols=33  Identities=18%  Similarity=0.407  Sum_probs=16.2

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      |.++++|.|..|++.|.....|..|++.|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            444444555555555555555555555544443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.01  E-value=3.1e-10  Score=45.71  Aligned_cols=30  Identities=23%  Similarity=0.448  Sum_probs=19.9

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCe
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      ||.|..|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            566666666666666666666666666665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.3e-10  Score=47.12  Aligned_cols=37  Identities=16%  Similarity=0.288  Sum_probs=32.5

Q ss_pred             cccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCC
Q psy14147         20 PIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRR   57 (100)
Q Consensus        20 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~   57 (100)
                      +++|.+++||.|..|++.|.....|..|++ .|.+++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIK-TNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHH-HHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHH-HHcCCCC
Confidence            357888999999999999999999999994 8887654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.4e-12  Score=60.98  Aligned_cols=50  Identities=28%  Similarity=0.396  Sum_probs=42.7

Q ss_pred             hHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCCC
Q psy14147         42 FSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTV   99 (100)
Q Consensus        42 ~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~   99 (100)
                      ..|..|+ ..|.++++|.|..|++.|.....|..       +++|.|+.|++.|.+.+
T Consensus         4 ~~l~~H~-~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~   53 (73)
T 2ctu_A            4 GSSGKRQ-KIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEA   53 (73)
T ss_dssp             CSCCCCC-CCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCC
T ss_pred             hhHHHHH-HHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHH
Confidence            4567788 48999999999999999988877765       78999999999998764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.95  E-value=6.9e-11  Score=58.28  Aligned_cols=44  Identities=20%  Similarity=0.390  Sum_probs=40.6

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccc
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKM   94 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~   94 (100)
                      .|.++++|.|.+|++.|.....|..|++.|++++||.|..|.+.
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~   62 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERR   62 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhH
Confidence            68899999999999999999999999999999999999887643

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.93  E-value=6.7e-10  Score=45.67  Aligned_cols=36  Identities=22%  Similarity=0.392  Sum_probs=32.2

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      |+ ..|.+++||.|+.|++.|.....|..|++.|+++
T Consensus         2 H~-~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 ST-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CS-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CC-CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            55 4789999999999999999999999999999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.9e-11  Score=57.12  Aligned_cols=52  Identities=15%  Similarity=0.133  Sum_probs=45.5

Q ss_pred             HHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCC
Q psy14147         43 SLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTN   97 (100)
Q Consensus        43 ~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   97 (100)
                      .|..|+ ..+.+.+++.|..|+..|. ...|..|. .+.+++|+.|+.|++.|..
T Consensus         4 ~L~~H~-~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~   55 (75)
T 2d9k_A            4 GSSGHE-ETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV   55 (75)
T ss_dssp             CCSCCC-CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET
T ss_pred             HHHhhC-cccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH
Confidence            456777 4788999999999999994 88999999 8999999999999998863

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.92  E-value=1.1e-09  Score=44.45  Aligned_cols=35  Identities=26%  Similarity=0.412  Sum_probs=30.7

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCCCC
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRR   57 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~   57 (100)
                      +|.+++||.|..|++.|.....|..|++ .|.+++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLK-VHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHG-GGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHH-HcCCCCC
Confidence            3678899999999999999999999994 8887654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=7.2e-10  Score=45.88  Aligned_cols=34  Identities=35%  Similarity=0.722  Sum_probs=18.4

Q ss_pred             CCCCCccCc--cccccccChhHHHHHHHhcCCCCCe
Q psy14147         53 LNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        53 ~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      +++++|.|.  .|++.|.....|..|++.|++++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            344555555  3555555555555555555555554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=1.1e-09  Score=44.39  Aligned_cols=35  Identities=23%  Similarity=0.248  Sum_probs=30.5

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCCCC
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRR   57 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~   57 (100)
                      +|.+++||.|..|++.|.....|..|++ .|.+++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIR-EVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHH-HTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHH-HHcCCCC
Confidence            3668899999999999999999999994 8887653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.7e-09  Score=45.08  Aligned_cols=32  Identities=16%  Similarity=0.148  Sum_probs=17.5

Q ss_pred             cCCCCCccCcc--ccccccChhHHHHHHHhcCCC
Q psy14147         52 HLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        52 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      +.+++||.|..  |+++|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34455555553  555555555555555555543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.7e-09  Score=44.57  Aligned_cols=33  Identities=24%  Similarity=0.225  Sum_probs=21.9

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHH-HhhhcCC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMH-QRHVHLN   54 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h-~~~~~~~   54 (100)
                      ++|.+++||.|+.|++.|.....|..| + ..|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVI-QKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHH-HHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHH-HHccC
Confidence            456666777777777777777777777 5 35554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.8e-09  Score=44.00  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=14.6

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      |.++++|.|..|++.|.....|..|++.|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            3344444444444444444444444444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.2e-09  Score=43.80  Aligned_cols=31  Identities=26%  Similarity=0.517  Sum_probs=15.6

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      |.++++|.|..|++.|.....|..|++.|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            3444455555555555555555555555444

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=2.8e-09  Score=43.41  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=17.9

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      |.++++|.|..|++.|.....|..|++.|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44455555555555555555555555555544

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.2e-09  Score=43.83  Aligned_cols=26  Identities=19%  Similarity=0.400  Sum_probs=13.3

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHH
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      |.+++||.|..|++.|.....|..|+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~   29 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHM   29 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHH
Confidence            34445555555555555555555555

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.84  E-value=1.8e-09  Score=43.38  Aligned_cols=32  Identities=28%  Similarity=0.411  Sum_probs=29.1

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCCCCcc
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQ   59 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~   59 (100)
                      +||.|.+|++.|.....|..|+ ..|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHI-TLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHH-HHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHH-HHhCCCCCCC
Confidence            5799999999999999999999 5999998874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.5e-09  Score=43.92  Aligned_cols=26  Identities=23%  Similarity=0.267  Sum_probs=13.3

Q ss_pred             ccCCCceeCchhhhhccCh-hHHHHHH
Q psy14147         23 LYCVKPYACEECGKAFRKK-FSLTMHQ   48 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~-~~l~~h~   48 (100)
                      |.+++||.|..|++.|... ..|..|+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~   30 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHI   30 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHH
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHH
Confidence            4444555555555555554 5555554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=4.6e-09  Score=42.83  Aligned_cols=30  Identities=27%  Similarity=0.506  Sum_probs=14.3

Q ss_pred             CCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         53 LNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        53 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      .++++|.|..|++.|.....|..|++.|++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            334444444444444444444444444444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.78  E-value=2.3e-09  Score=44.08  Aligned_cols=25  Identities=32%  Similarity=0.566  Sum_probs=12.8

Q ss_pred             CCCCCccCccccccccChhHHHHHH
Q psy14147         53 LNDRRYQCDLCLARFVTNSSLIVHK   77 (100)
Q Consensus        53 ~~~~~~~c~~c~~~~~~~~~l~~h~   77 (100)
                      .+++||.|..|+++|...+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3445555555555555555555554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.9e-09  Score=42.74  Aligned_cols=34  Identities=18%  Similarity=0.274  Sum_probs=31.0

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      .|.++++|.|..|++.|.....|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4778899999999999999999999999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.78  E-value=4e-09  Score=46.02  Aligned_cols=33  Identities=39%  Similarity=0.776  Sum_probs=19.1

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      |.+++||.|.+|++.|.....|..|++..|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            455666666666666666666666662145543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.8e-09  Score=42.49  Aligned_cols=34  Identities=29%  Similarity=0.393  Sum_probs=29.9

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      .+|.+++||.|..|++.|.....|..|++ .|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMN-RHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHH-HSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHH-HhccC
Confidence            35778999999999999999999999994 88764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=6.3e-09  Score=42.33  Aligned_cols=34  Identities=32%  Similarity=0.468  Sum_probs=29.9

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      .+|.+++||.|..|++.|.....|..|++ .|.++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLR-KHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHH-HHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHH-HccCC
Confidence            35778999999999999999999999994 88765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.5e-09  Score=43.11  Aligned_cols=34  Identities=26%  Similarity=0.398  Sum_probs=31.0

Q ss_pred             hcCCCCCccCccccccccCh-hHHHHHHHhcCCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTN-SSLIVHKQRHDNTP   84 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~-~~l~~h~~~~~~~~   84 (100)
                      .|.++++|.|..|++.|... ..|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            57889999999999999999 99999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.74  E-value=3.2e-09  Score=43.67  Aligned_cols=26  Identities=35%  Similarity=0.590  Sum_probs=24.0

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHH
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +.+++||.|.+|+++|....+|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45789999999999999999999997

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=6.7e-09  Score=42.83  Aligned_cols=35  Identities=29%  Similarity=0.646  Sum_probs=30.9

Q ss_pred             ccCCCceeCc--hhhhhccChhHHHHHHhhhcCCCCCc
Q psy14147         23 LYCVKPYACE--ECGKAFRKKFSLTMHQRHVHLNDRRY   58 (100)
Q Consensus        23 ~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~~~   58 (100)
                      |.+++||.|.  .|++.|.....|..|+ ..|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHK-HKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHH-HHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHH-HHhCCCCCC
Confidence            4578999999  5999999999999999 489988876

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.72  E-value=3.2e-10  Score=45.36  Aligned_cols=29  Identities=24%  Similarity=0.434  Sum_probs=14.4

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCCCCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLNDRR   57 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~   57 (100)
                      ||.|..|++.|.....|..|+ ..|++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~-~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHI-KTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSST-TSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHH-HHHccCCC
Confidence            445555555555555555555 24544444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=8.5e-09  Score=42.36  Aligned_cols=33  Identities=27%  Similarity=0.426  Sum_probs=30.2

Q ss_pred             hcCCCCCccCccccccccChhHHHHH-HHhcCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVH-KQRHDNT   83 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~~   83 (100)
                      .|.+++||.|..|++.|.....|..| .+.|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            57889999999999999999999999 8888864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.1e-08  Score=41.60  Aligned_cols=33  Identities=33%  Similarity=0.505  Sum_probs=29.3

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      .|.++++|.|.+|++.|.....|..|++ .|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKL-LHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHH-HHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHH-HhcCC
Confidence            4678899999999999999999999994 88765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.71  E-value=8.6e-09  Score=44.93  Aligned_cols=35  Identities=26%  Similarity=0.468  Sum_probs=29.5

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHH-hcCCCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQ-RHDNTPR   85 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~   85 (100)
                      +|+++++|.|.+|++.|.....|..|++ .|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3788999999999999999999999999 9988654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1e-08  Score=42.61  Aligned_cols=33  Identities=21%  Similarity=0.258  Sum_probs=28.8

Q ss_pred             cccCCCceeCch--hhhhccChhHHHHHHhhhcCCC
Q psy14147         22 ILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        22 ~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      .+.+++||.|..  |++.|.....|..|++ .|++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r-~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLK-VHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHH-HHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence            356789999986  9999999999999995 88864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=4e-08  Score=45.75  Aligned_cols=32  Identities=28%  Similarity=0.382  Sum_probs=19.7

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +..++||.|..|++.|.....|..|++ .|++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r-~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEA-QHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHH-HHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhh-hhCCC
Confidence            345566666666666666666666663 56554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.5e-08  Score=41.24  Aligned_cols=33  Identities=39%  Similarity=0.617  Sum_probs=29.0

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      .|.+++||.|..|++.|.....|..|++ .|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLR-IHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHH-HHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHH-HhCCC
Confidence            4567899999999999999999999994 88765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.69  E-value=1.1e-08  Score=41.95  Aligned_cols=32  Identities=19%  Similarity=0.330  Sum_probs=15.8

Q ss_pred             cCCCCCccCcc--ccccccChhHHHHHHHhcCCC
Q psy14147         52 HLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        52 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      |.++++|.|.+  |++.|.....|..|++.|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34444555542  555555555555555555443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=2.4e-08  Score=38.62  Aligned_cols=22  Identities=41%  Similarity=0.886  Sum_probs=11.7

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~   23 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHL   23 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHH
Confidence            3455555555555555555555

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.65  E-value=2.9e-08  Score=38.15  Aligned_cols=27  Identities=26%  Similarity=0.628  Sum_probs=14.6

Q ss_pred             CccCccccccccChhHHHHHHHhcCCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ||.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.65  E-value=1.1e-08  Score=44.35  Aligned_cols=34  Identities=24%  Similarity=0.571  Sum_probs=19.1

Q ss_pred             cccccCCCceeCc--hhhhhccChhHHHHHHhhhcCC
Q psy14147         20 PIILYCVKPYACE--ECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        20 ~~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      ...|.+++||.|.  .|++.|.....|..|++ .|.+
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~-~H~~   45 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLE   45 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHH-HccC
Confidence            3445556666663  46666666666666653 5554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.63  E-value=2.3e-08  Score=38.51  Aligned_cols=21  Identities=43%  Similarity=0.806  Sum_probs=10.5

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      ||.|..|++.|.....|..|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~   22 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHI   22 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHH
T ss_pred             CccCCCCCchhCCHHHHHHHH
Confidence            444555555555555555554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.61  E-value=3.6e-08  Score=38.10  Aligned_cols=28  Identities=29%  Similarity=0.521  Sum_probs=16.0

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +|.|..|++.|.....|..|++.|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4555566666665556666655555543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.60  E-value=5.5e-08  Score=38.35  Aligned_cols=28  Identities=46%  Similarity=0.819  Sum_probs=15.2

Q ss_pred             CCccCc--cccccccChhHHHHHHHhcCCC
Q psy14147         56 RRYQCD--LCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        56 ~~~~c~--~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            345555  4555555555555555555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.59  E-value=1.7e-09  Score=43.10  Aligned_cols=31  Identities=19%  Similarity=0.364  Sum_probs=28.0

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCCCe
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      +||.|..|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4789999999999999999999999999886

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=2.8e-08  Score=38.16  Aligned_cols=21  Identities=43%  Similarity=0.846  Sum_probs=10.5

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      ||.|..|++.|.....|..|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~   22 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHL   22 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHH
Confidence            444555555555555555554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.58  E-value=4.9e-08  Score=38.25  Aligned_cols=27  Identities=30%  Similarity=0.635  Sum_probs=14.9

Q ss_pred             CccCc--cccccccChhHHHHHHHhcCCC
Q psy14147         57 RYQCD--LCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        57 ~~~c~--~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ||.|.  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.58  E-value=5.5e-09  Score=45.32  Aligned_cols=38  Identities=18%  Similarity=0.294  Sum_probs=32.7

Q ss_pred             HHHhhhcCCCCCccCc--cccccccChhHHHHHHHhcCCCC
Q psy14147         46 MHQRHVHLNDRRYQCD--LCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      .|. ..|.+++||.|.  .|++.|.....|..|++.|++++
T Consensus         8 ~~~-~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGS-CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHH-hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344 368999999995  79999999999999999999864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.56  E-value=3.8e-08  Score=37.73  Aligned_cols=27  Identities=22%  Similarity=0.362  Sum_probs=14.4

Q ss_pred             CccCccccccccChhHHHHHHHhcCCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ||.|..|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.54  E-value=6.3e-08  Score=37.37  Aligned_cols=30  Identities=33%  Similarity=0.612  Sum_probs=27.1

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      ++||.|..|++.|.....|..|++.|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            368999999999999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.52  E-value=6.5e-08  Score=36.87  Aligned_cols=22  Identities=41%  Similarity=0.970  Sum_probs=12.4

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~   23 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHY   23 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHH
Confidence            4555555555555555555555

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.51  E-value=7.4e-08  Score=36.35  Aligned_cols=25  Identities=44%  Similarity=0.862  Sum_probs=12.8

Q ss_pred             ccCccccccccChhHHHHHHHhcCC
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      |.|..|++.|.....|..|++.|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            4455555555555555555555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.51  E-value=6.4e-08  Score=39.62  Aligned_cols=33  Identities=30%  Similarity=0.383  Sum_probs=28.6

Q ss_pred             cccCCCceeCch--hhhhccChhHHHHHHhhhcCCC
Q psy14147         22 ILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        22 ~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      .|.+++||.|..  |++.|.....|..|++ .|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLR-WHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHH-HHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence            367889999994  9999999999999994 88765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.90  E-value=1.3e-08  Score=39.32  Aligned_cols=21  Identities=48%  Similarity=0.836  Sum_probs=11.4

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      ||.|..|++.|.....|..|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~   22 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHV   22 (29)
Confidence            455555555555555555555

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.50  E-value=6.5e-08  Score=37.12  Aligned_cols=29  Identities=28%  Similarity=0.623  Sum_probs=26.4

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47899999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=9.5e-08  Score=36.13  Aligned_cols=22  Identities=32%  Similarity=0.643  Sum_probs=12.9

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHL   23 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHH
Confidence            4555666666666555555555

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.48  E-value=9.7e-08  Score=36.91  Aligned_cols=26  Identities=35%  Similarity=0.704  Sum_probs=12.8

Q ss_pred             CccCccccccccChhHHHHH-HHhcCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVH-KQRHDN   82 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h-~~~~~~   82 (100)
                      ||.|..|++.|.....|..| .+.|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            34455555555555555555 344444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.8e-08  Score=39.09  Aligned_cols=22  Identities=36%  Similarity=0.756  Sum_probs=12.1

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~   23 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHV   23 (30)
Confidence            3455555555555555555555

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.47  E-value=1e-07  Score=36.47  Aligned_cols=28  Identities=36%  Similarity=0.775  Sum_probs=24.8

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +||.|..|++.|.....|..|++ .|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHH-HHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHH-HhcCC
Confidence            47999999999999999999994 78764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.46  E-value=8.3e-08  Score=36.40  Aligned_cols=22  Identities=27%  Similarity=0.554  Sum_probs=13.9

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHM   23 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHH
T ss_pred             cCcCCCCCCcccCCHHHHHHHH
Confidence            4566666666666666666665

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.45  E-value=9.7e-08  Score=36.36  Aligned_cols=28  Identities=29%  Similarity=0.589  Sum_probs=25.2

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +++|.|..|++.|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3689999999999999999999998864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1.2e-07  Score=44.11  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=30.9

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      .+.+++||.|..|++.|.....|..|+++|+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            3677899999999999999999999999999864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=1e-07  Score=36.48  Aligned_cols=29  Identities=24%  Similarity=0.426  Sum_probs=26.3

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47899999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1.3e-07  Score=35.78  Aligned_cols=27  Identities=26%  Similarity=0.577  Sum_probs=24.4

Q ss_pred             CCCccCccccccccChhHHHHHHHhcC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            368999999999999999999999874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1e-07  Score=36.17  Aligned_cols=27  Identities=30%  Similarity=0.554  Sum_probs=24.2

Q ss_pred             CCCccCccccccccChhHHHHHHHhcC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            368999999999999999999998774

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.41  E-value=1.3e-07  Score=36.44  Aligned_cols=29  Identities=21%  Similarity=0.395  Sum_probs=25.3

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLNDR   56 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~   56 (100)
                      +||.|..|++.|.....|..|++ .|.++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIK-TKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHH-HHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHH-HHccCC
Confidence            47999999999999999999994 787654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.39  E-value=2.3e-07  Score=36.44  Aligned_cols=29  Identities=34%  Similarity=0.833  Sum_probs=25.6

Q ss_pred             CCceeCc--hhhhhccChhHHHHHHhhhcCCC
Q psy14147         26 VKPYACE--ECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        26 ~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      ++||.|.  .|++.|.....|..|++ .|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHH-HccCC
Confidence            4689999  89999999999999994 88765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=1e-07  Score=36.40  Aligned_cols=28  Identities=32%  Similarity=0.661  Sum_probs=24.7

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +||.|..|++.|.....|..|++ .|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLK-IHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHH-HHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHH-HhccC
Confidence            57999999999999999999994 77764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.37  E-value=2e-07  Score=36.38  Aligned_cols=28  Identities=36%  Similarity=0.853  Sum_probs=24.8

Q ss_pred             CceeCc--hhhhhccChhHHHHHHhhhcCCC
Q psy14147         27 KPYACE--ECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        27 ~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +||.|.  .|++.|.....|..|++ .|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~-~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHH-HhcCC
Confidence            579998  99999999999999994 88765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=4.4e-08  Score=37.71  Aligned_cols=29  Identities=34%  Similarity=0.618  Sum_probs=25.8

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47899999999999999999999998763

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.70  E-value=5.3e-08  Score=37.66  Aligned_cols=29  Identities=24%  Similarity=0.479  Sum_probs=26.0

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +||.|..|++.|.....|..|++.|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            57999999999999999999999998763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.34  E-value=2.1e-07  Score=35.91  Aligned_cols=28  Identities=39%  Similarity=0.771  Sum_probs=24.3

Q ss_pred             CceeCchhhhhccChhHHHHH-HhhhcCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMH-QRHVHLND   55 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h-~~~~~~~~   55 (100)
                      +||.|..|++.|.....|..| + ..|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQ-KIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHT-TTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHH-HHccCC
Confidence            479999999999999999999 5 477764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.30  E-value=3e-07  Score=34.56  Aligned_cols=26  Identities=46%  Similarity=0.857  Sum_probs=22.5

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      ||.|..|++.|.....|..|++ .|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~-~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQR-VHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGG-GTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHH-HcCC
Confidence            5889999999999999999994 7765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.60  E-value=1.1e-07  Score=35.67  Aligned_cols=22  Identities=50%  Similarity=0.990  Sum_probs=13.6

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +||.|..|++.|.....|..|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHI   22 (26)
Confidence            3566666666666666666665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.4e-07  Score=35.29  Aligned_cols=26  Identities=42%  Similarity=0.806  Sum_probs=22.8

Q ss_pred             CCccCccccccccChhHHHHHHHhcC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      +||.|..|++.|.....|..|++.|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47899999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.19  E-value=1e-06  Score=33.50  Aligned_cols=21  Identities=33%  Similarity=0.928  Sum_probs=12.2

Q ss_pred             ceeCc--hhhhhccChhHHHHHH
Q psy14147         28 PYACE--ECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~--~C~~~f~~~~~l~~h~   48 (100)
                      ||.|.  .|++.|.....|..|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~   24 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHK   24 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHH
T ss_pred             CCCCcCCcCcCccCCHHHHHHHH
Confidence            45555  5666565555555555

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.11  E-value=1.6e-06  Score=32.92  Aligned_cols=27  Identities=30%  Similarity=0.454  Sum_probs=24.2

Q ss_pred             CCccCc--cccccccChhHHHHHHHhcCC
Q psy14147         56 RRYQCD--LCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        56 ~~~~c~--~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      ++|.|.  .|++.|.....|..|++.|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            368899  999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.88  E-value=2.6e-05  Score=35.87  Aligned_cols=50  Identities=20%  Similarity=0.313  Sum_probs=40.3

Q ss_pred             CchhhhhccChhHHHHHHhhhcCCCC------CccCc--cccccccChhHHHHHHHhc
Q psy14147         31 CEECGKAFRKKFSLTMHQRHVHLNDR------RYQCD--LCLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        31 c~~C~~~f~~~~~l~~h~~~~~~~~~------~~~c~--~c~~~~~~~~~l~~h~~~~   80 (100)
                      +..|++.|.+...|..|+...|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45689999999999999855787665      68886  6988888888888888753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.22  E-value=6.2e-05  Score=39.04  Aligned_cols=28  Identities=18%  Similarity=0.278  Sum_probs=16.0

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHH
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~   78 (100)
                      .++|.++|.|..|++.|.....|..|.+
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            3455555666666666666655555554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.15  E-value=0.0001  Score=38.28  Aligned_cols=31  Identities=26%  Similarity=0.281  Sum_probs=27.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHh
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      +-..|.+.+||.|..|++.|.+...|..|++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4456788999999999999999999999985

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.62  E-value=0.0022  Score=33.45  Aligned_cols=23  Identities=13%  Similarity=0.267  Sum_probs=20.3

Q ss_pred             CCceeCchhhhhccChhHHHHHH
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      .+++.|..|...|.+...+..|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHH
Confidence            46689999999999999888887

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.57  E-value=0.00017  Score=33.10  Aligned_cols=45  Identities=16%  Similarity=0.057  Sum_probs=35.8

Q ss_pred             hHHHHHHHHHHHHhcc-ccccCCC------ceeCc--hhhhhccChhHHHHHHh
Q psy14147          5 SREVMEIQKDVVQSFP-IILYCVK------PYACE--ECGKAFRKKFSLTMHQR   49 (100)
Q Consensus         5 ~~~~~~~~~~~l~~h~-~~~~~~~------~~~c~--~C~~~f~~~~~l~~h~~   49 (100)
                      .++..|.+...|..|+ +.|.+.+      +|.|.  .|+..+.....|..|++
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            3566788888999997 4676554      78886  89999888889999985

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.39  E-value=0.0023  Score=27.33  Aligned_cols=23  Identities=30%  Similarity=0.407  Sum_probs=14.0

Q ss_pred             CCccCccccccccChhHHHHHHH
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~   78 (100)
                      .++.|+.|+..|.....|..|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34556666666666666666655

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.13  E-value=0.0065  Score=33.02  Aligned_cols=37  Identities=16%  Similarity=0.440  Sum_probs=15.4

Q ss_pred             ccCccccccccChhHHHHHHHhcCCCCCeecCCCcccc
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMF   95 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   95 (100)
                      ..|+.|+..+ ....|..|....-..++-.|+.|+..+
T Consensus       111 v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~  147 (170)
T 3hcs_A          111 MDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM  147 (170)
T ss_dssp             EECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE
T ss_pred             eECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc
Confidence            3444444433 233344444433334444444444433

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.52  E-value=0.016  Score=30.17  Aligned_cols=44  Identities=25%  Similarity=0.531  Sum_probs=33.6

Q ss_pred             CCCccCccccccccChhHHHHHHH--hc-------------------------------CCCCCeecCCCccccCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQ--RH-------------------------------DNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~--~~-------------------------------~~~~~~~C~~C~~~f~~~   98 (100)
                      ..++.|.+|...|.....+..|..  .|                               .+...|.|..|++.|.+.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCH
Confidence            356889999999999888888872  11                               124567899999999864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.51  E-value=0.014  Score=24.90  Aligned_cols=23  Identities=26%  Similarity=0.410  Sum_probs=21.4

Q ss_pred             CceeCchhhhhccChhHHHHHHh
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      .++.|+.|+..|.....|..||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            67899999999999999999995

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.32  E-value=0.017  Score=22.98  Aligned_cols=26  Identities=27%  Similarity=0.434  Sum_probs=21.5

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHL   53 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~   53 (100)
                      .|.|++|-+.+.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            48899999999999999998865554

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=94.20  E-value=0.005  Score=29.31  Aligned_cols=14  Identities=36%  Similarity=0.743  Sum_probs=11.2

Q ss_pred             CCCeecCCCccccC
Q psy14147         83 TPRFKCKLCPKMFT   96 (100)
Q Consensus        83 ~~~~~C~~C~~~f~   96 (100)
                      +-.|+||.||..|-
T Consensus        49 ~F~FkCP~CgEEFy   62 (95)
T 2k5c_A           49 EFVFKCPVCGEEFY   62 (95)
T ss_dssp             HSEEECTTTCCEEE
T ss_pred             HHhhcCCCccHHHh
Confidence            34689999998884

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=94.14  E-value=0.038  Score=26.26  Aligned_cols=51  Identities=20%  Similarity=0.359  Sum_probs=35.1

Q ss_pred             CCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHH
Q psy14147         25 CVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        25 ~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~   78 (100)
                      .--.|.|+.|+..+. +..+..|. ..-.+...+.|..|+..|.. .....|..
T Consensus         7 ~MV~F~C~~Cgd~lK-K~kv~~H~-~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            7 GMVFFTCNACGESVK-KIQVEKHV-SNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             CCCEEEESSSCCEEE-TTHHHHHH-HHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             ceeEEEcCCCCCeee-cccchhHH-hhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            344588999997665 45678887 35555567889999999975 34555543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.22  E-value=0.32  Score=26.30  Aligned_cols=68  Identities=19%  Similarity=0.360  Sum_probs=44.2

Q ss_pred             HHHhccccccCCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCCCCe
Q psy14147         15 VVQSFPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        15 ~l~~h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      .+..|... ..-.+..|+.|+..+ ....|..|.. ..-..+...|+.|+..+.. ..+..|...++|+.++
T Consensus        98 ~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~-~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A           98 HLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHIL-KDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             GHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHH-HTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             HHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhh-hhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            44555432 344667888898777 4556888873 4445666789999887644 5688899888887654

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=91.15  E-value=0.13  Score=25.85  Aligned_cols=29  Identities=21%  Similarity=0.425  Sum_probs=19.0

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCCCeecCCCcccc
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMF   95 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f   95 (100)
                      .|+.|..||..|.           -.-.+|-.|+.|+...
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCc
Confidence            4678888888871           1224567788887554

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=91.00  E-value=0.24  Score=27.86  Aligned_cols=11  Identities=18%  Similarity=0.274  Sum_probs=5.2

Q ss_pred             CccCccccccc
Q psy14147         57 RYQCDLCLARF   67 (100)
Q Consensus        57 ~~~c~~c~~~~   67 (100)
                      .|.|..||..+
T Consensus       171 ~~~C~~CG~i~  181 (202)
T 1yuz_A          171 FHLCPICGYIH  181 (202)
T ss_dssp             EEECSSSCCEE
T ss_pred             EEEECCCCCEE
Confidence            34555555443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.67  E-value=0.13  Score=19.95  Aligned_cols=24  Identities=29%  Similarity=0.519  Sum_probs=20.2

Q ss_pred             eeCchhhhhccChhHHHHHHhhhc
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      ..|..|.+.+....+|..|++..|
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            568899999999999999997544

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=89.56  E-value=0.13  Score=28.09  Aligned_cols=23  Identities=26%  Similarity=0.600  Sum_probs=13.9

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCeecCCCc
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCP   92 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   92 (100)
                      .|.|+.||..+.             ++-|-.||.||
T Consensus       138 ~~~C~~CG~i~~-------------~~~p~~CP~Cg  160 (170)
T 3pwf_A          138 VYICPICGYTAV-------------DEAPEYCPVCG  160 (170)
T ss_dssp             EEECTTTCCEEE-------------SCCCSBCTTTC
T ss_pred             eeEeCCCCCeeC-------------CCCCCCCCCCC
Confidence            466777776553             13455677776

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=88.72  E-value=0.25  Score=18.64  Aligned_cols=21  Identities=19%  Similarity=0.464  Sum_probs=16.5

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      .+.|++|....++...+..|.
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~   23 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHV   23 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHH
Confidence            377888888888888887775

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=88.16  E-value=0.23  Score=25.42  Aligned_cols=26  Identities=23%  Similarity=0.603  Sum_probs=17.6

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCe-ecCCCccc
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRF-KCKLCPKM   94 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~-~C~~C~~~   94 (100)
                      .|.|..|+..|...            +.++ .||.||..
T Consensus        73 ~~~C~~CG~~~e~~------------~~~~~~CP~Cgs~   99 (119)
T 2kdx_A           73 ELECKDCSHVFKPN------------ALDYGVCEKCHSK   99 (119)
T ss_dssp             EEECSSSSCEECSC------------CSTTCCCSSSSSC
T ss_pred             eEEcCCCCCEEeCC------------CCCCCcCccccCC
Confidence            47788888777541            3456 78888754

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=86.48  E-value=0.12  Score=28.74  Aligned_cols=25  Identities=16%  Similarity=0.417  Sum_probs=15.1

Q ss_pred             CccCccccccccChhHHHHHHHhcCCCCCeecCCCcc
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPK   93 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~   93 (100)
                      .|.|..||..+...            +.|-.||.||.
T Consensus       155 ~~~C~~CG~~~~g~------------~~p~~CP~C~~  179 (191)
T 1lko_A          155 KWRCRNCGYVHEGT------------GAPELCPACAH  179 (191)
T ss_dssp             EEEETTTCCEEEEE------------ECCSBCTTTCC
T ss_pred             eEEECCCCCEeeCC------------CCCCCCCCCcC
Confidence            46777777665411            34557777764

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=85.85  E-value=0.26  Score=21.60  Aligned_cols=21  Identities=24%  Similarity=0.531  Sum_probs=18.6

Q ss_pred             eeCchhhhhccChhHHHHHHh
Q psy14147         29 YACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      -.|..|+..|..+..++.|+.
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            589999999999999999873

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.98  E-value=0.2  Score=23.26  Aligned_cols=59  Identities=17%  Similarity=0.353  Sum_probs=35.2

Q ss_pred             HHHhccccccCCCceeC-chhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHH
Q psy14147         15 VVQSFPIILYCVKPYAC-EECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHK   77 (100)
Q Consensus        15 ~l~~h~~~~~~~~~~~c-~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~   77 (100)
                      .|..|. ......+-.| ..|+..+.. ..|..|.. ..-..++..|..|+..+. ...|..|.
T Consensus         4 ~l~~H~-~~C~~~~v~C~~~C~~~v~r-~~l~~H~~-~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A            4 GSSGHL-NTCSFNVIPCPNRCPMKLSR-RDLPAHLQ-HDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             SCSCCC-CCCCCSCCBCTTCCSCBCCS-SSSTTTTT-TSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             HHHHHH-HHCCCcccCCCccccHHhhH-hHHHhhCH-hhCCCcceECCCCCCccC-HHHHHHHH
Confidence            345565 2334556778 578876654 45667762 233445667888887764 34566654

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=84.78  E-value=0.43  Score=23.15  Aligned_cols=25  Identities=24%  Similarity=0.351  Sum_probs=16.5

Q ss_pred             ccCccccccccChhHHHHHHHhcCCCCC
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHDNTPR   85 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~   85 (100)
                      ..|.+||+.|..   |..|+..++|..|
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             eEecccchhhHH---HHHHHHHccCCCH
Confidence            467777777764   5577777666554

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.43  E-value=1.3  Score=17.65  Aligned_cols=22  Identities=18%  Similarity=0.351  Sum_probs=12.5

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      .++.|..|+-+|....++..|.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhh
Confidence            3455666666666555555555

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=83.16  E-value=0.51  Score=20.04  Aligned_cols=13  Identities=38%  Similarity=0.894  Sum_probs=8.5

Q ss_pred             CeecCCCccccCC
Q psy14147         85 RFKCKLCPKMFTN   97 (100)
Q Consensus        85 ~~~C~~C~~~f~~   97 (100)
                      .|.|..||+.|+.
T Consensus         3 iY~C~rCg~~fs~   15 (48)
T 4ayb_P            3 VYRCGKCWKTFTD   15 (48)
T ss_dssp             --CCCCTTTTCCC
T ss_pred             EEEeeccCCCccH
Confidence            3678888888765

>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}

Probab=82.93  E-value=0.45  Score=22.71  Aligned_cols=16  Identities=19%  Similarity=0.428  Sum_probs=12.5

Q ss_pred             cCCCCCeecCCCccccC
Q psy14147         80 HDNTPRFKCKLCPKMFT   96 (100)
Q Consensus        80 ~~~~~~~~C~~C~~~f~   96 (100)
                      +.+ ++..|++||..|.
T Consensus        52 ~~g-~~~RC~eCG~~fk   67 (80)
T 2odx_A           52 TVN-EVARCWECGSVYK   67 (80)
T ss_dssp             CTT-CEEECSSSCCEEE
T ss_pred             cCC-CCeECCCCCeEEE
Confidence            444 7889999998885

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=82.88  E-value=0.64  Score=21.56  Aligned_cols=12  Identities=25%  Similarity=0.866  Sum_probs=6.3

Q ss_pred             CccCcccccccc
Q psy14147         57 RYQCDLCLARFV   68 (100)
Q Consensus        57 ~~~c~~c~~~~~   68 (100)
                      .|.|..|+..|.
T Consensus        28 ~Y~C~~CG~~~e   39 (70)
T 1twf_L           28 KYICAECSSKLS   39 (70)
T ss_dssp             CEECSSSCCEEC
T ss_pred             EEECCCCCCcce
Confidence            355555555543

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=82.31  E-value=0.95  Score=18.42  Aligned_cols=23  Identities=22%  Similarity=0.553  Sum_probs=15.6

Q ss_pred             CCceeCchhhhhccChhHHHHHHh
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      ...+.|..|+..++. ..+..|..
T Consensus         7 ~~~~~C~~C~~~i~~-~~~~EH~D   29 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPV-WDMPEHMD   29 (39)
T ss_dssp             CCEEECTTTCCEEEG-GGHHHHHH
T ss_pred             CCCcccccccCcCCc-ccccchhh
Confidence            345788888888776 34566663

>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...

Probab=81.75  E-value=0.54  Score=23.35  Aligned_cols=17  Identities=18%  Similarity=0.518  Sum_probs=13.0

Q ss_pred             hcCCCCCeecCCCccccC
Q psy14147         79 RHDNTPRFKCKLCPKMFT   96 (100)
Q Consensus        79 ~~~~~~~~~C~~C~~~f~   96 (100)
                      .+.+ +|..|+.||..|.
T Consensus        74 l~~g-~~~RC~eCG~~fk   90 (98)
T 1v54_F           74 LHKG-EAQRCPSCGTHYK   90 (98)
T ss_dssp             EESS-SCEECTTTCCEEE
T ss_pred             EeCC-CceECCCCCeEEE
Confidence            3444 5999999998885

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=81.52  E-value=1.4  Score=19.95  Aligned_cols=13  Identities=38%  Similarity=0.524  Sum_probs=7.3

Q ss_pred             CCccCcccccccc
Q psy14147         56 RRYQCDLCLARFV   68 (100)
Q Consensus        56 ~~~~c~~c~~~~~   68 (100)
                      ..|.|..|+..+.
T Consensus        20 v~Y~C~~Cg~~~~   32 (63)
T 3h0g_L           20 MIYLCADCGARNT   32 (63)
T ss_dssp             CCCBCSSSCCBCC
T ss_pred             eEEECCCCCCeee
Confidence            4466666665543

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=80.76  E-value=1.1  Score=23.08  Aligned_cols=28  Identities=18%  Similarity=0.224  Sum_probs=23.7

Q ss_pred             CCCceeCchhhhhccChhHHHHHHhhhc
Q psy14147         25 CVKPYACEECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        25 ~~~~~~c~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      ...+..|-.|...|.....+..|++..|
T Consensus        12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H   39 (121)
T 1wir_A           12 GRQHTPCLFCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHSS
T ss_pred             CCCceeEecCCCcccCHHHHHHHHHHhc
Confidence            3467899999999999999999997544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	100
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-10
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-08
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-07
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	2e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	7e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	5e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	9e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.004
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (118), Expect = 2e-10
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL 62
          KPY C+ CGK F +   L  H + VH ++R ++C +
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 9e-08
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
          K Y C+ CGK+F  K     H        R Y C +C  +F     L+ H + H
Sbjct: 2  KLYPCQ-CGKSFTHKSQRDRHMSMHL-GLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.4 bits (98), Expect = 2e-07
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          KP+ C  C + F +   LT H R
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIR 24

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (98), Expect = 2e-07
 Identities = 14/23 (60%), Positives = 15/23 (65%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          KPY C ECGKAF +   L  HQR
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQR 23

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 3e-07
 Identities = 14/23 (60%), Positives = 15/23 (65%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          KPY C ECGKAF +   L  HQR
Sbjct: 6  KPYGCVECGKAFSRSSILVQHQR 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.9 bits (94), Expect = 7e-07
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          + + CE C +AF ++  L  H R
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYR 23

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-06
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVH 52
          KPY C  C   F +  ++ MH    H
Sbjct: 7  KPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.1 bits (71), Expect = 0.002
 Identities = 8/30 (26%), Positives = 17/30 (56%)

Query: 51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
           H  ++ Y+C +C ARF  + ++ +H  + 
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 5e-06
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          KPYAC  C K FR+K  L MH +
Sbjct: 7  KPYACSHCDKTFRQKQLLDMHFK 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (88), Expect = 5e-06
 Identities = 7/23 (30%), Positives = 11/23 (47%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          +P+ C  C  AF  K +   H +
Sbjct: 6  RPFVCRICLSAFTTKANCARHLK 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 6e-06
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          K +AC EC K F +   L+ H +
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIK 23

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 2e-05
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 27 KPYACEE--CGKAFRKKFSLTMHQR 49
          KP+ C    C K++ +  +L  H R
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLR 25

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-05
 Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 27 KPYAC--EECGKAFRKKFSLTMHQR 49
          +P+ C    CGK F +   L  H+R
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKR 25

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.4 bits (82), Expect = 5e-05
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 27 KPYACEE--CGKAFRKKFSLTMHQR 49
          +PYAC    C + F +   LT H R
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIR 25

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 5e-05
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 29 YACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCD 61
          ++C E  CGK+F  K  L  H + +H + R Y C+
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICE 35

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 9e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 27 KPYACEE--CGKAFRKKFSLTMHQR 49
          KP+ C    CGK F   F+L  H R
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVR 25

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 1e-04
 Identities = 8/28 (28%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 27 KPYACEECGKAFRKKFSLTMHQRHVHLN 54
          KP+ C +C ++F +   L +H++  H+ 
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRK-RHML 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 27 KPYACEECGKAFRKKFSLTMHQR 49
          + Y C+ECGK+F     L+ H+R
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRR 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.5 bits (69), Expect = 0.004
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH 80
           +       RRY+CD C   F  +S L  H++ H
Sbjct: 3  SEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.1 bits (76), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 27 KPYACEE--CGKAFRKKFSLTMHQR 49
          +PY+C+   C KAF +   L  H++
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKK 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	100
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.76
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.68
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.5
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.5
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.46
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.43
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.42
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.34
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.33
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.31
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.3
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.28
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.27
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.26
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.24
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.24
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.21
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.21
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.19
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.17
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.15
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.12
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.1
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.09
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.05
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.05
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.98
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.74
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.73
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.68
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.66
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.49
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.45
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.44
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.41
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.4
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.34
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.32
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.31
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.16
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.04
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.03
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.84
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.78
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.74
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.69
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.68
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.65
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.59
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.57
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.56
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.53
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.52
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.47
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.41
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.37
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.31
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.3
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.3
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.28
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.25
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.07
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.07
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.95
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.92
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.83
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.72
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.72
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.7
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.48
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.26
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.22
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.93
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.78
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.53
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.34
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.25
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.1
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.02
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	94.46
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	94.44
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.57
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.53
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.54
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.17
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	91.02
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	90.27
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	88.24
d1v87a_	114	Deltex protein 2 RING-H2 domain {Mouse (Mus muscul	88.06
d1d4ua2	36	DNA repair factor XPA DNA- and RPA-binding domain,	87.84
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	87.5
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	86.89
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.2
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.04
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.47
d1zina2	35	Microbial and mitochondrial ADK, insert "zinc fing	82.76
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	81.78
d1e4va2	35	Microbial and mitochondrial ADK, insert "zinc fing	81.39
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.29
d1s3ga2	35	Microbial and mitochondrial ADK, insert "zinc fing	80.19

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.6e-19  Score=79.30  Aligned_cols=53  Identities=36%  Similarity=0.696  Sum_probs=49.2

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccccccChhHHHHHHHhc
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~   80 (100)
                      +|||.| .||+.|.....|..|+ ..|++++||.|..|+++|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~-~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHh-hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            589999 5999999999999999 4999999999999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.3e-17  Score=74.14  Aligned_cols=44  Identities=27%  Similarity=0.508  Sum_probs=41.3

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNTV   99 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~   99 (100)
                      ++||.|. ||+.|.....|..|+++|++++||.|+.||+.|.+.+
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~   44 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKH   44 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSH
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHH
Confidence            5799995 9999999999999999999999999999999999764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=7.9e-15  Score=60.30  Aligned_cols=35  Identities=26%  Similarity=0.490  Sum_probs=19.4

Q ss_pred             CCCccCccccccccChhHHHHHHH-hcCCCCCeecC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQ-RHDNTPRFKCK   89 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~C~   89 (100)
                      ++||.|..|+++|.....|..|++ .|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            345555555555555555555543 45555555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.4e-15  Score=60.23  Aligned_cols=38  Identities=37%  Similarity=0.806  Sum_probs=34.6

Q ss_pred             CCCceeCchhhhhccChhHHHHHHhhhcCCCCCccCcc
Q psy14147         25 CVKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDL   62 (100)
Q Consensus        25 ~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~   62 (100)
                      .++||.|.+||+.|....+|..|++..|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            47999999999999999999999855799999999964

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.2e-14  Score=59.76  Aligned_cols=35  Identities=31%  Similarity=0.578  Sum_probs=19.2

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcCC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      |+++|.+++||.|++||++|...++|..|++ .|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r-~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCc-cCCC
Confidence            4555555555555555555555555555552 5554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.8e-14  Score=55.83  Aligned_cols=32  Identities=28%  Similarity=0.558  Sum_probs=19.9

Q ss_pred             cCCCCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         52 HLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        52 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      |++++||.|.+|+++|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55666666666666666666666666666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.6e-14  Score=58.29  Aligned_cols=37  Identities=30%  Similarity=0.557  Sum_probs=34.2

Q ss_pred             HHHhhhcCCCCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         46 MHQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        46 ~h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      .|+ ..|++++||.|.+|+++|...+.|..|+++|+||
T Consensus         2 rH~-~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCC-SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccC-cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            366 4899999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.34  E-value=3.9e-13  Score=54.77  Aligned_cols=34  Identities=24%  Similarity=0.604  Sum_probs=23.6

Q ss_pred             ccccccCCCceeCchhhhhccChhHHHHHHhhhcC
Q psy14147         19 FPIILYCVKPYACEECGKAFRKKFSLTMHQRHVHL   53 (100)
Q Consensus        19 h~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   53 (100)
                      |.++|.+++||.|.+|+++|....+|..|++ .|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r-~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHh-cCc
Confidence            5667777777777777777777777777763 554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.3e-13  Score=53.06  Aligned_cols=33  Identities=52%  Similarity=0.857  Sum_probs=30.3

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +|.+++||.|.+|+++|...+.|..|++ .|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r-~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH-GGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcc-ccCCC
Confidence            4789999999999999999999999995 89874

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.31  E-value=7.7e-13  Score=50.90  Aligned_cols=29  Identities=28%  Similarity=0.631  Sum_probs=18.9

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +||.|++|+++|...+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35666666666666666666666666654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=1.1e-12  Score=52.54  Aligned_cols=30  Identities=27%  Similarity=0.620  Sum_probs=15.3

Q ss_pred             CCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         53 LNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        53 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +|++||.|.+|++.|....+|..|+++|++
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCC
Confidence            445555555555555555555555555543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.4e-12  Score=52.71  Aligned_cols=32  Identities=25%  Similarity=0.513  Sum_probs=16.1

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +|+|++||.|.+|+++|...+.|..|++.|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            34455555555555555555555555555443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.6e-12  Score=49.92  Aligned_cols=29  Identities=28%  Similarity=0.659  Sum_probs=18.7

Q ss_pred             CCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +||.|.+|+++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35666666666666666666666666653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.6e-12  Score=52.53  Aligned_cols=27  Identities=30%  Similarity=0.513  Sum_probs=15.9

Q ss_pred             cccCCCceeCchhhhhccChhHHHHHH
Q psy14147         22 ILYCVKPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        22 ~~~~~~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +|.+++||.|+.|++.|....+|..|+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHc
Confidence            455556666666666666665565555

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.8e-12  Score=52.40  Aligned_cols=34  Identities=38%  Similarity=0.582  Sum_probs=30.7

Q ss_pred             ccccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         21 IILYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        21 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      ++|.+++||.|.+|+++|.....|..|++ .|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r-~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHH-HTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCc-ccCCC
Confidence            57899999999999999999999999995 77654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.9e-12  Score=52.68  Aligned_cols=35  Identities=23%  Similarity=0.403  Sum_probs=31.6

Q ss_pred             HHhhhcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         47 HQRHVHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        47 h~~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      |. ..|++++||.|..|+++|...+.|..|++.|.+
T Consensus         2 h~-R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 ST-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CS-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CC-CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            55 389999999999999999999999999998864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2e-12  Score=52.10  Aligned_cols=32  Identities=25%  Similarity=0.549  Sum_probs=24.4

Q ss_pred             ccCcc--ccccccChhHHHHHHHhcCCCCCeecC
Q psy14147         58 YQCDL--CLARFVTNSSLIVHKQRHDNTPRFKCK   89 (100)
Q Consensus        58 ~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~C~   89 (100)
                      |.|+.  |++.|.....|..|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            45654  788888888888888888888888775

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=2.8e-12  Score=48.77  Aligned_cols=27  Identities=37%  Similarity=0.717  Sum_probs=14.7

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHL   53 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~   53 (100)
                      +|||.|.+|+++|....+|..|++ .|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r-~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIR-THT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHH
T ss_pred             CcCccCCCCcCEecccccccccCC-Ccc
Confidence            355555555555555555555553 454

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=5.2e-12  Score=50.48  Aligned_cols=32  Identities=28%  Similarity=0.523  Sum_probs=29.3

Q ss_pred             ccCCCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         23 LYCVKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        23 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      |.+++||.|.+|++.|....+|..|++ .|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc-ccCCc
Confidence            678999999999999999999999995 88764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=3.4e-12  Score=48.53  Aligned_cols=28  Identities=25%  Similarity=0.720  Sum_probs=26.6

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      ++||.|.+|+++|.....|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5799999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.17  E-value=6.7e-12  Score=48.19  Aligned_cols=29  Identities=34%  Similarity=0.779  Sum_probs=26.8

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLNDR   56 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~   56 (100)
                      +||.|++|+++|.....|..|++ .|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r-~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccC-cccCCC
Confidence            68999999999999999999995 999874

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1e-11  Score=47.63  Aligned_cols=29  Identities=38%  Similarity=0.723  Sum_probs=26.7

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLNDR   56 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~   56 (100)
                      |||.|.+|+++|...+.|..|++ .|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r-~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIK-THQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHH-GGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcC-ccCCcC
Confidence            68999999999999999999995 999874

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2e-11  Score=49.17  Aligned_cols=32  Identities=25%  Similarity=0.666  Sum_probs=28.5

Q ss_pred             hcCCCCCccCccccccccChhHHHHHHHhcCC
Q psy14147         51 VHLNDRRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        51 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +|+|++||.|+.|++.|...++|..|++.+++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            68999999999999999999999999865443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=5.8e-12  Score=53.75  Aligned_cols=38  Identities=24%  Similarity=0.590  Sum_probs=19.5

Q ss_pred             HHhccccccCCCceeCch--hhhhccChhHHHHHHhhhcCCC
Q psy14147         16 VQSFPIILYCVKPYACEE--CGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        16 l~~h~~~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      |..|+. |.+++||.|..  |++.|....+|..|++ .|+|+
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTT
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcc-cccCC
Confidence            444443 55555555544  5555555555555552 55544

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=3.3e-12  Score=54.53  Aligned_cols=40  Identities=20%  Similarity=0.383  Sum_probs=35.1

Q ss_pred             HHHHHHhhhcCCCCCccCcc--ccccccChhHHHHHHHhcCCCC
Q psy14147         43 SLTMHQRHVHLNDRRYQCDL--CLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        43 ~l~~h~~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      .+..|+  .|.+++||.|.+  |++.|...+.|..|+++|+|++
T Consensus         6 ~l~~h~--~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC--EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh--hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            345565  489999999987  9999999999999999999985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.7e-11  Score=45.52  Aligned_cols=22  Identities=59%  Similarity=1.072  Sum_probs=11.6

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      |||+|.+||++|...+.|..|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hq   22 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQ   22 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCc
Confidence            3455555555555555555555

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=7.6e-11  Score=45.39  Aligned_cols=28  Identities=18%  Similarity=0.462  Sum_probs=19.3

Q ss_pred             CCccCcc--ccccccChhHHHHHHHhcCCC
Q psy14147         56 RRYQCDL--CLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        56 ~~~~c~~--c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      +||.|.+  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3666766  777777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.7e-11  Score=44.95  Aligned_cols=26  Identities=38%  Similarity=0.676  Sum_probs=24.5

Q ss_pred             CCccCccccccccChhHHHHHHHhcC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      +||.|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999885

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.2e-10  Score=44.90  Aligned_cols=27  Identities=30%  Similarity=0.596  Sum_probs=16.1

Q ss_pred             CccCcc--ccccccChhHHHHHHHhcCCC
Q psy14147         57 RYQCDL--CLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        57 ~~~c~~--c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ||.|++  |+++|...+.|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            555644  666666666666666666554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3e-10  Score=44.07  Aligned_cols=29  Identities=31%  Similarity=0.638  Sum_probs=19.9

Q ss_pred             CCccCc--cccccccChhHHHHHHHhcCCCC
Q psy14147         56 RRYQCD--LCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        56 ~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +||.|+  .|++.|...+.|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            366674  47777777777777777777764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.3e-10  Score=45.95  Aligned_cols=32  Identities=41%  Similarity=0.927  Sum_probs=29.2

Q ss_pred             eeCch--hhhhccChhHHHHHHhhhcCCCCCccCc
Q psy14147         29 YACEE--CGKAFRKKFSLTMHQRHVHLNDRRYQCD   61 (100)
Q Consensus        29 ~~c~~--C~~~f~~~~~l~~h~~~~~~~~~~~~c~   61 (100)
                      |.|+.  |++.|.....|..|++ .|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeCCCCCEeCC
Confidence            67876  9999999999999995 99999999996

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=6.9e-10  Score=42.64  Aligned_cols=28  Identities=32%  Similarity=0.624  Sum_probs=25.6

Q ss_pred             CceeCch--hhhhccChhHHHHHHhhhcCCC
Q psy14147         27 KPYACEE--CGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        27 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +||.|..  |+++|.....|..|++ .|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR-SHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH-HTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC-cCcCC
Confidence            6899988  9999999999999995 99875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=8.8e-10  Score=42.38  Aligned_cols=28  Identities=46%  Similarity=0.979  Sum_probs=25.4

Q ss_pred             CceeCch--hhhhccChhHHHHHHhhhcCCC
Q psy14147         27 KPYACEE--CGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        27 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +||.|+.  |+++|.....|..|++ .|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR-IHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH-HHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCcccc-ccCCC
Confidence            6899987  9999999999999995 89875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=1.7e-09  Score=41.15  Aligned_cols=26  Identities=31%  Similarity=0.641  Sum_probs=13.4

Q ss_pred             CccCcc--ccccccChhHHHHHHHhcCC
Q psy14147         57 RYQCDL--CLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        57 ~~~c~~--c~~~~~~~~~l~~h~~~~~~   82 (100)
                      ||.|.+  |++.|.....|..|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            455544  55555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=5.9e-09  Score=40.54  Aligned_cols=27  Identities=48%  Similarity=0.879  Sum_probs=15.3

Q ss_pred             CCccCcc--ccccccChhHHHHHHHhcCC
Q psy14147         56 RRYQCDL--CLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        56 ~~~~c~~--c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +||.|.+  |++.|.....|..|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            4555544  55666555556666555553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.8e-09  Score=40.58  Aligned_cols=29  Identities=34%  Similarity=0.855  Sum_probs=25.7

Q ss_pred             CceeCc--hhhhhccChhHHHHHHhhhcCCCC
Q psy14147         27 KPYACE--ECGKAFRKKFSLTMHQRHVHLNDR   56 (100)
Q Consensus        27 ~~~~c~--~C~~~f~~~~~l~~h~~~~~~~~~   56 (100)
                      +||.|+  .|++.|....+|..|++ .|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r-~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC-cccccC
Confidence            589996  59999999999999995 899874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=9.4e-09  Score=38.93  Aligned_cols=29  Identities=24%  Similarity=0.434  Sum_probs=21.5

Q ss_pred             ccCccccccccChhHHHHHHHhcCCCCCe
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHDNTPRF   86 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~   86 (100)
                      ..|..||++|.....|+.|..+|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45777777777777777777777777776

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=7.1e-09  Score=39.01  Aligned_cols=25  Identities=28%  Similarity=0.642  Sum_probs=14.0

Q ss_pred             CccCcc--ccccccChhHHHHHHHhcC
Q psy14147         57 RYQCDL--CLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        57 ~~~c~~--c~~~~~~~~~l~~h~~~~~   81 (100)
                      ||.|++  |+++|....+|..|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            555544  5555555555555555553

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=6.9e-09  Score=39.43  Aligned_cols=27  Identities=41%  Similarity=0.899  Sum_probs=24.3

Q ss_pred             CceeCch--hhhhccChhHHHHHHhhhcCC
Q psy14147         27 KPYACEE--CGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        27 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      +||.|..  |++.|....+|..|++ .|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r-~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR-IHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH-HHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC-ccCC
Confidence            6899988  9999999999999995 8875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=3.2e-08  Score=38.37  Aligned_cols=28  Identities=36%  Similarity=0.871  Sum_probs=25.2

Q ss_pred             CCceeCch--hhhhccChhHHHHHHhhhcCC
Q psy14147         26 VKPYACEE--CGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        26 ~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      ++||.|..  |++.|....+|..|++ .|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r-~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh-hccC
Confidence            58999988  9999999999999995 8874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=3.7e-08  Score=34.84  Aligned_cols=26  Identities=46%  Similarity=0.853  Sum_probs=16.5

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      |.+|+.|++.|..+..|..|++ .|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr-~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMR-CHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGG-GCCC
T ss_pred             CCccchhhhHhcchhHHHHHhh-ccCC
Confidence            3456677777777777777763 5553

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=4.6e-08  Score=36.20  Aligned_cols=29  Identities=38%  Similarity=0.786  Sum_probs=20.4

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      ++||.|++|...|..+..+..|.+ .|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvr-shdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVR-SHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHH-HHSCC
T ss_pred             CCCcccchHHHHhhccccceEeee-cccCc
Confidence            467777777777777777777774 66553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=8.1e-08  Score=34.76  Aligned_cols=29  Identities=28%  Similarity=0.599  Sum_probs=23.0

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ++||.|+.|..+....+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            36788888888888888888888888763

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=2.5e-08  Score=37.47  Aligned_cols=26  Identities=35%  Similarity=0.719  Sum_probs=23.2

Q ss_pred             CceeCch--hhhhccChhHHHHHHhhhcC
Q psy14147         27 KPYACEE--CGKAFRKKFSLTMHQRHVHL   53 (100)
Q Consensus        27 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~   53 (100)
                      +||.|+.  |+++|....+|..|++ .|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r-~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL-THA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH-HHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh-hcc
Confidence            6899988  9999999999999995 764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.3e-07  Score=33.42  Aligned_cols=26  Identities=23%  Similarity=0.492  Sum_probs=23.6

Q ss_pred             CccCccccccccChhHHHHHHHhcCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      |..|++|++.|+....|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45799999999999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=2.2e-07  Score=34.34  Aligned_cols=29  Identities=28%  Similarity=0.690  Sum_probs=26.5

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      ++||.|++|...|.....+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47999999999999999999999999875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.3e-07  Score=35.02  Aligned_cols=33  Identities=39%  Similarity=0.755  Sum_probs=28.8

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCcc
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQ   59 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~   59 (100)
                      .+...|..||+.|.....|..|. ..|.+++||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhk-lshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhh-cccCCCCCCC
Confidence            35578999999999999999999 6999999873

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=2.1e-07  Score=33.90  Aligned_cols=26  Identities=35%  Similarity=0.861  Sum_probs=17.2

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhc
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      ++||.|++||+.|..+.....|.+ .|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~k-iH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTK-IH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHG-GG
T ss_pred             CCCcccchhhhhhhcchhhhhhhh-hc
Confidence            466777777777777766666663 44

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2.8e-07  Score=33.14  Aligned_cols=24  Identities=33%  Similarity=0.510  Sum_probs=13.4

Q ss_pred             cCccccccccChhHHHHHHHhcCC
Q psy14147         59 QCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        59 ~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      .|.+||++|...+.|.+|+..|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            355555555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=4.8e-07  Score=32.92  Aligned_cols=27  Identities=22%  Similarity=0.581  Sum_probs=23.4

Q ss_pred             CCCccCccccccccChhHHHHHHHhcC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      ++||.|..||+.|........|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999988888888774

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.4e-06  Score=31.55  Aligned_cols=27  Identities=30%  Similarity=0.458  Sum_probs=22.5

Q ss_pred             ccCccccccccChhHHHHHHHhcCCCC
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      |.|+.|+..-..++-|+.|.++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888888764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=2.3e-06  Score=30.25  Aligned_cols=26  Identities=27%  Similarity=0.672  Sum_probs=17.6

Q ss_pred             cCccccccccChhHHHHHHHhcCCCC
Q psy14147         59 QCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        59 ~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +|+.|.+.|.+...|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46667777777777777777776653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.4e-06  Score=30.66  Aligned_cols=26  Identities=46%  Similarity=0.778  Sum_probs=23.2

Q ss_pred             eeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      ..|..||+.|.-.+.|..|+ ..|+++
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccCC
Confidence            57999999999999999999 588874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.84  E-value=9.4e-06  Score=31.95  Aligned_cols=28  Identities=36%  Similarity=0.716  Sum_probs=17.7

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      +.|.|..|++.|.+...|-.|+ ..|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~-~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM-NVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCCS
T ss_pred             CccCCCCCCCccCCcccccchH-hhhcch
Confidence            4466777777777766677776 355443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.78  E-value=1.3e-05  Score=31.58  Aligned_cols=30  Identities=27%  Similarity=0.522  Sum_probs=26.7

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      .+.|.|..|++.|.+...|-.|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            357899999999999999999999998664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.6e-05  Score=29.21  Aligned_cols=21  Identities=38%  Similarity=0.785  Sum_probs=10.0

Q ss_pred             ceeCch--hhhhccChhHHHHHH
Q psy14147         28 PYACEE--CGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~--C~~~f~~~~~l~~h~   48 (100)
                      ||.|.+  |++++...++|..|+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~   24 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHV   24 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHH
Confidence            444444  444444444444444

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.5e-05  Score=28.67  Aligned_cols=29  Identities=38%  Similarity=0.690  Sum_probs=25.1

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCC
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      ++||+|..|......++.|.-|.+ .|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr-~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLR-SHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHT-TCCSC
T ss_pred             CCcceeeecccccCCchheEEeee-cccCc
Confidence            479999999999999999999995 88763

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.68  E-value=1.3e-05  Score=29.72  Aligned_cols=26  Identities=35%  Similarity=0.805  Sum_probs=17.1

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHL   53 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~   53 (100)
                      ||.|.+|++.|..+.-|..|+...|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            56777777777777777777643443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.7e-05  Score=28.79  Aligned_cols=22  Identities=36%  Similarity=0.643  Sum_probs=11.0

Q ss_pred             CccCccccccccChhHHHHHHH
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~   78 (100)
                      ||+|+.|.......++|..|.+
T Consensus         2 py~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhh
Confidence            4455555544444455555544

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=3.6e-05  Score=27.42  Aligned_cols=22  Identities=41%  Similarity=0.717  Sum_probs=11.4

Q ss_pred             CceeCchhhhhccChhHHHHHH
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +|++|..|.......++|..|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~   23 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHL   23 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccccccchhcchhhHhhhh
Confidence            4455555555555555555554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=3.6e-05  Score=30.50  Aligned_cols=23  Identities=30%  Similarity=0.707  Sum_probs=11.2

Q ss_pred             CCCccCccccccccChhHHHHHH
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHK   77 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~   77 (100)
                      -+||.|..|++.|.+...+..|.
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhh
Confidence            34555555555555554444443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.56  E-value=4.1e-05  Score=27.58  Aligned_cols=25  Identities=28%  Similarity=0.805  Sum_probs=12.0

Q ss_pred             eeCchhhhhccChhHHHHHHhhhcCC
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      |.|..|...|...-.|..|| ..|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hm-vshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHM-VSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHH-HHHSS
T ss_pred             EEeHHHHHHHHHHHhheeee-ecccC
Confidence            44555555555554454454 34443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=2.6e-05  Score=27.05  Aligned_cols=22  Identities=36%  Similarity=0.795  Sum_probs=17.0

Q ss_pred             ceeCchhhhhccChhHHHHHHh
Q psy14147         28 PYACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      ||.|..|...|-.+.+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6778888888888888877773

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.7e-05  Score=28.59  Aligned_cols=27  Identities=33%  Similarity=0.636  Sum_probs=23.3

Q ss_pred             CCccCcc--ccccccChhHHHHHHHhcCC
Q psy14147         56 RRYQCDL--CLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        56 ~~~~c~~--c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +||.|.+  |++.+..++.|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4788876  99999999999999997654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.7e-05  Score=30.86  Aligned_cols=24  Identities=38%  Similarity=0.704  Sum_probs=22.0

Q ss_pred             CCCceeCchhhhhccChhHHHHHH
Q psy14147         25 CVKPYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        25 ~~~~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      +.|||.|..|++.|--..++..|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            679999999999999999998886

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.48  E-value=4.5e-05  Score=27.45  Aligned_cols=24  Identities=38%  Similarity=0.663  Sum_probs=15.1

Q ss_pred             CccCcc--ccccccChhHHHHHHHhc
Q psy14147         57 RYQCDL--CLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        57 ~~~c~~--c~~~~~~~~~l~~h~~~~   80 (100)
                      ||.|+.  |++.|..++.|.+|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            555543  666677777777666654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=5.1e-05  Score=27.00  Aligned_cols=26  Identities=31%  Similarity=0.496  Sum_probs=24.0

Q ss_pred             CCccCccccccccChhHHHHHHHhcC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      +|+.|..|..+....+.|..|++.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999885

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=5.1e-05  Score=26.69  Aligned_cols=26  Identities=35%  Similarity=0.782  Sum_probs=22.7

Q ss_pred             eCchhhhhccChhHHHHHHhhhcCCCC
Q psy14147         30 ACEECGKAFRKKFSLTMHQRHVHLNDR   56 (100)
Q Consensus        30 ~c~~C~~~f~~~~~l~~h~~~~~~~~~   56 (100)
                      +|+.|.+.|.++..|.-|-+ .|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr-~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR-KHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH-HHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccc-cccCCC
Confidence            59999999999999999985 888763

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=2.8e-05  Score=28.78  Aligned_cols=25  Identities=28%  Similarity=0.615  Sum_probs=12.7

Q ss_pred             CccCcc--ccccccChhHHHHHH-HhcC
Q psy14147         57 RYQCDL--CLARFVTNSSLIVHK-QRHD   81 (100)
Q Consensus        57 ~~~c~~--c~~~~~~~~~l~~h~-~~~~   81 (100)
                      ||.|+.  |.++|+..++-..|+ ++|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            445543  555555555555554 4443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=9.5e-05  Score=25.58  Aligned_cols=19  Identities=37%  Similarity=0.740  Sum_probs=9.3

Q ss_pred             eCchhhhhccChhHHHHHH
Q psy14147         30 ACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        30 ~c~~C~~~f~~~~~l~~h~   48 (100)
                      +|..|..+|..++.|..|+
T Consensus         2 kcglcersfveksalsrhq   20 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQ   20 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHG
T ss_pred             cccchHHHHHHHHHHHHHH
Confidence            3444444554444444444

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.31  E-value=9.7e-05  Score=26.58  Aligned_cols=29  Identities=21%  Similarity=0.544  Sum_probs=26.1

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      +..|.|.+|...|.....|..|+-+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688999999999999999999999985

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00016  Score=26.20  Aligned_cols=28  Identities=25%  Similarity=0.436  Sum_probs=23.9

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhcCC
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      +||.|..|.......++|..|++..|..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            6899999999999999999999755543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00011  Score=26.45  Aligned_cols=21  Identities=43%  Similarity=0.822  Sum_probs=12.8

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      ||.|..|...|..+.+|..||
T Consensus         1 py~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhh
Confidence            455666666666666666665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=9.2e-05  Score=26.77  Aligned_cols=26  Identities=23%  Similarity=0.654  Sum_probs=16.2

Q ss_pred             CceeCchhhhhccChhHHHHHHhhhc
Q psy14147         27 KPYACEECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        27 ~~~~c~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      +||+|+.|...-...++|..|++..|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            36677777666666666766665333

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=6.2e-05  Score=27.15  Aligned_cols=25  Identities=28%  Similarity=0.579  Sum_probs=22.4

Q ss_pred             CccCccccccccChhHHHHHHHhcC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      ||.|..|...|....+|..|+++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6889999999999999999998643

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.25  E-value=8.9e-05  Score=25.65  Aligned_cols=24  Identities=42%  Similarity=0.845  Sum_probs=21.1

Q ss_pred             ccCccccccccChhHHHHHHHhcC
Q psy14147         58 YQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        58 ~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      |.|-.|.+.|...+.|..|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            568889999999999999999875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00011  Score=26.06  Aligned_cols=21  Identities=38%  Similarity=0.950  Sum_probs=15.9

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      ||+|..||+.+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            577777887777777777775

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.07  E-value=0.00019  Score=25.91  Aligned_cols=21  Identities=43%  Similarity=0.939  Sum_probs=10.2

Q ss_pred             ceeCch--hhhhccChhHHHHHH
Q psy14147         28 PYACEE--CGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~--C~~~f~~~~~l~~h~   48 (100)
                      ||.|..  |.+.|.....|.+|.
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs   24 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHS   24 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHH
T ss_pred             CcCcccccccccchhhhhhhhhh
Confidence            444433  445555555555554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00025  Score=25.51  Aligned_cols=27  Identities=44%  Similarity=0.742  Sum_probs=23.2

Q ss_pred             eeCchhhhhccChhHHHHHHhhhcCCCC
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVHLNDR   56 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~~~~~   56 (100)
                      |.|+.|+..-.-.+-|+.|++ .|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIR-sHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIR-THTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH-HTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHH-HhcCCC
Confidence            789999999888899999995 898753

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.95  E-value=0.0002  Score=25.80  Aligned_cols=28  Identities=21%  Similarity=0.481  Sum_probs=23.6

Q ss_pred             CCccCcc--ccccccChhHHHHHHHhcCCC
Q psy14147         56 RRYQCDL--CLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        56 ~~~~c~~--c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      +||.|..  |.+.|...-.|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677754  999999999999999999875

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.92  E-value=0.0003  Score=24.27  Aligned_cols=22  Identities=27%  Similarity=0.649  Sum_probs=19.6

Q ss_pred             CccCccccccccChhHHHHHHH
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~   78 (100)
                      ||.|..|...|.+..+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.83  E-value=0.0005  Score=25.33  Aligned_cols=26  Identities=38%  Similarity=0.756  Sum_probs=21.7

Q ss_pred             CccCccccccccChhHHHHHHHh-cCC
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQR-HDN   82 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~~-~~~   82 (100)
                      ||.|.+|++.|....-|.+|.+. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            68999999999999999999774 443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00055  Score=24.66  Aligned_cols=27  Identities=22%  Similarity=0.485  Sum_probs=22.7

Q ss_pred             CCccCccccccccChhHHHHHHHhcCC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHDN   82 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~~   82 (100)
                      +||.|..|..--.+.++|..|.+.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            489999999888999999999885443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.72  E-value=0.00068  Score=24.78  Aligned_cols=27  Identities=33%  Similarity=0.563  Sum_probs=19.0

Q ss_pred             CccC--ccccccccChhHHHHHHHhcCCC
Q psy14147         57 RYQC--DLCLARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        57 ~~~c--~~c~~~~~~~~~l~~h~~~~~~~   83 (100)
                      .|.|  +.|+..|...+.|..|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4555  34777777777788887777764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00064  Score=26.44  Aligned_cols=23  Identities=35%  Similarity=0.869  Sum_probs=14.9

Q ss_pred             CCceeCch--hhhhccChhHHHHHH
Q psy14147         26 VKPYACEE--CGKAFRKKFSLTMHQ   48 (100)
Q Consensus        26 ~~~~~c~~--C~~~f~~~~~l~~h~   48 (100)
                      ++||.|..  |+.+|.+...|..|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk   28 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHK   28 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhh
Confidence            56677733  666777766666665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.0012  Score=25.70  Aligned_cols=28  Identities=36%  Similarity=0.801  Sum_probs=23.8

Q ss_pred             CCCCccC--ccccccccChhHHHHHHHhcC
Q psy14147         54 NDRRYQC--DLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        54 ~~~~~~c--~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      .++||.|  +.|+..|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3789999  569999999999999988764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.26  E-value=0.0017  Score=22.37  Aligned_cols=21  Identities=38%  Similarity=0.724  Sum_probs=17.4

Q ss_pred             eeCchhhhhccChhHHHHHHh
Q psy14147         29 YACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      |.|+.|-+.|..+.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            678888888888888888875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0016  Score=24.49  Aligned_cols=26  Identities=23%  Similarity=0.690  Sum_probs=20.6

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhcCC
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVHLN   54 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   54 (100)
                      .|.|..|+++|.....+..|.. ...|
T Consensus         4 afvcskcgktftrrntm~rha~-nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHAD-NCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH-HCCC
T ss_pred             eeeecccccchhcchHHHHHhh-hcCC
Confidence            4889999999999988888874 4544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.0028  Score=22.36  Aligned_cols=24  Identities=29%  Similarity=0.697  Sum_probs=17.2

Q ss_pred             eeCchhhhhccChhHHHHHHhhhc
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      |.|+.|+.....+++|.-|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            677888877777777777775433

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.0024  Score=24.19  Aligned_cols=19  Identities=32%  Similarity=0.517  Sum_probs=12.6

Q ss_pred             ccccChhHHHHHHHhcCCC
Q psy14147         65 ARFVTNSSLIVHKQRHDNT   83 (100)
Q Consensus        65 ~~~~~~~~l~~h~~~~~~~   83 (100)
                      +.|.....|..|+|.|+||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3466666777777777664

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.53  E-value=0.0088  Score=24.25  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=20.0

Q ss_pred             CCCccCccccccccChhHHHHHHHhcCCCC
Q psy14147         55 DRRYQCDLCLARFVTNSSLIVHKQRHDNTP   84 (100)
Q Consensus        55 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~   84 (100)
                      +.|..|+.|+....+..+|..|+...+-.+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            456677777777777777777776544333

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0038  Score=25.45  Aligned_cols=24  Identities=33%  Similarity=0.625  Sum_probs=19.7

Q ss_pred             ceeCchhhhhccChhHHHHHHhhhc
Q psy14147         28 PYACEECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      -+.|..|++.|+....|..|.. .|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEA-QH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEA-QH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHH-HH
T ss_pred             eeeccccccccCCHHHHhHhHH-hc
Confidence            4779999999999999988884 55

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.0068  Score=24.66  Aligned_cols=26  Identities=27%  Similarity=0.498  Sum_probs=22.9

Q ss_pred             CCccCccccccccChhHHHHHHHhcC
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQRHD   81 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~~~~   81 (100)
                      .-|.|-.|++.|.....|..|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45789999999999999999988774

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.013  Score=20.61  Aligned_cols=22  Identities=23%  Similarity=0.567  Sum_probs=12.4

Q ss_pred             cCccccccccChhHHHHHHHhc
Q psy14147         59 QCDLCLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        59 ~c~~c~~~~~~~~~l~~h~~~~   80 (100)
                      .|+.|...-+....|..|.+.|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4555555555555555555554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.02  E-value=0.011  Score=21.90  Aligned_cols=23  Identities=30%  Similarity=0.553  Sum_probs=16.7

Q ss_pred             CCccCccccccccChhHHHHHHH
Q psy14147         56 RRYQCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        56 ~~~~c~~c~~~~~~~~~l~~h~~   78 (100)
                      ..|.|.-||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            35677778888888777777754

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.46  E-value=0.0089  Score=23.28  Aligned_cols=12  Identities=25%  Similarity=0.587  Sum_probs=7.1

Q ss_pred             CCCCccCccccc
Q psy14147         54 NDRRYQCDLCLA   65 (100)
Q Consensus        54 ~~~~~~c~~c~~   65 (100)
                      ++.|-.|++|+.
T Consensus        17 g~~P~~CPvCg~   28 (37)
T d1nnqa2          17 DEAPEYCPVCGA   28 (37)
T ss_dssp             SCCCSBCTTTCC
T ss_pred             CCCCCcCCCCCC
Confidence            345556776664

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=94.44  E-value=0.0092  Score=23.09  Aligned_cols=12  Identities=17%  Similarity=0.692  Sum_probs=6.5

Q ss_pred             CCCCccCccccc
Q psy14147         54 NDRRYQCDLCLA   65 (100)
Q Consensus        54 ~~~~~~c~~c~~   65 (100)
                      ++.|-.|++|+.
T Consensus        17 g~~Pe~CPvCg~   28 (36)
T d1yuza2          17 GEDFEKCPICFR   28 (36)
T ss_dssp             SSCCSBCTTTCC
T ss_pred             CCCCCcCCCCCC
Confidence            344556666654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.57  E-value=0.0078  Score=26.70  Aligned_cols=22  Identities=23%  Similarity=0.467  Sum_probs=13.2

Q ss_pred             CccCccccccccChhHHHHHHH
Q psy14147         57 RYQCDLCLARFVTNSSLIVHKQ   78 (100)
Q Consensus        57 ~~~c~~c~~~~~~~~~l~~h~~   78 (100)
                      .|.|..|++.|.....|..|.+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3556666666666666666554

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.53  E-value=0.03  Score=20.94  Aligned_cols=21  Identities=19%  Similarity=0.610  Sum_probs=11.1

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      .|.|..|.+.+...+++-.|.
T Consensus         8 ~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHH
Confidence            455555555555555555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.54  E-value=0.088  Score=18.65  Aligned_cols=21  Identities=29%  Similarity=0.752  Sum_probs=14.3

Q ss_pred             eeCchhhhhccChhHHHHHHh
Q psy14147         29 YACEECGKAFRKKFSLTMHQR   49 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~   49 (100)
                      |.|..|++...+...+..|..
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            567777777777776666663

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.17  E-value=0.045  Score=23.76  Aligned_cols=36  Identities=14%  Similarity=0.480  Sum_probs=17.4

Q ss_pred             CCceeCchhhhhccChhHHHHHHhhhcCCCCCccCccccc
Q psy14147         26 VKPYACEECGKAFRKKFSLTMHQRHVHLNDRRYQCDLCLA   65 (100)
Q Consensus        26 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~~~~~~c~~c~~   65 (100)
                      ...|.|+.|++.|.....++.    .......|.|..|+.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L----~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL----FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH----EETTTTEEBCSSSCC
T ss_pred             CCceECCCCCCCcchhhHHHh----cCcCCCeEEecCCCC
Confidence            344666666666654433211    222334556666654

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=91.02  E-value=0.028  Score=21.82  Aligned_cols=10  Identities=20%  Similarity=-0.260  Sum_probs=4.6

Q ss_pred             CccCcccccc
Q psy14147         57 RYQCDLCLAR   66 (100)
Q Consensus        57 ~~~c~~c~~~   66 (100)
                      .-.|..|+..
T Consensus        22 ~g~CD~cg~~   31 (37)
T d2ak3a2          22 MGIDDLTGEP   31 (37)
T ss_dssp             TTBCTTTCCB
T ss_pred             cCCccCCCCc
Confidence            3445555443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.27  E-value=0.12  Score=18.22  Aligned_cols=21  Identities=29%  Similarity=0.638  Sum_probs=14.7

Q ss_pred             chhhhhccChhHHHHHHhhhc
Q psy14147         32 EECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        32 ~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      +-|++.|.....|..|.+..|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            348888888888777765444

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.24  E-value=0.079  Score=22.97  Aligned_cols=21  Identities=29%  Similarity=0.686  Sum_probs=11.9

Q ss_pred             ceeCchhhhhccChhHHHHHH
Q psy14147         28 PYACEECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        28 ~~~c~~C~~~f~~~~~l~~h~   48 (100)
                      -|+|..|+..|.....|..|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl   38 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHL   38 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHH
Confidence            355555555555555555555

>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: RING/U-box
superfamily: RING/U-box
family: RING finger domain, C3HC4
domain: Deltex protein 2 RING-H2 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.06  E-value=0.32  Score=23.29  Aligned_cols=69  Identities=12%  Similarity=0.187  Sum_probs=36.3

Q ss_pred             eeCchhhhhccChhHHHHHHhhhcCCC-CCccCccccccccChhHHHHHHHhcCCCCCeecCCCccccCCC
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVHLND-RRYQCDLCLARFVTNSSLIVHKQRHDNTPRFKCKLCPKMFTNT   98 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~~~~-~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~   98 (100)
                      -.|.+|-..+................. ....-..|+..|.. .-|..+++....+....|+.|...|..+
T Consensus        26 ~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~-~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~   95 (114)
T d1v87a_          26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHL-LCLLAMYCNGNKDGSLQCPSCKTIYGEK   95 (114)
T ss_dssp             CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECH-HHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred             ccccchhheecccccccccccccccccccceEECCCCChhhH-HHHHHHHHhcCcCCCCccccccchhccC
Confidence            469999876644322111110001111 12223448888754 4566666654444457899998877543

>d1d4ua2 g.39.1.5 (A:1-36) DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain
domain: DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.11  Score=19.62  Aligned_cols=13  Identities=31%  Similarity=0.746  Sum_probs=10.0

Q ss_pred             eecCCCccccCCC
Q psy14147         86 FKCKLCPKMFTNT   98 (100)
Q Consensus        86 ~~C~~C~~~f~~~   98 (100)
                      ..|.+||+.|..+
T Consensus         6 ~~C~eCg~~F~DS   18 (36)
T d1d4ua2           6 VICEECGKEFMDS   18 (36)
T ss_dssp             EECTTTCCEESCS
T ss_pred             HHHHHhCcHHHHH
Confidence            4688899988754

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.50  E-value=0.11  Score=20.16  Aligned_cols=9  Identities=11%  Similarity=0.482  Sum_probs=4.1

Q ss_pred             eCchhhhhc
Q psy14147         30 ACEECGKAF   38 (100)
Q Consensus        30 ~c~~C~~~f   38 (100)
                      .|..||..|
T Consensus         4 ~C~~cG~~Y   12 (38)
T d1akya2           4 IHPASGRSY   12 (38)
T ss_dssp             ECTTTCCEE
T ss_pred             CCcCccchh
Confidence            344454443

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.89  E-value=0.32  Score=20.00  Aligned_cols=31  Identities=35%  Similarity=0.647  Sum_probs=19.7

Q ss_pred             CCCceeCch--hhhhccChhHHHHHHhhhcCCC
Q psy14147         25 CVKPYACEE--CGKAFRKKFSLTMHQRHVHLND   55 (100)
Q Consensus        25 ~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~~   55 (100)
                      .-+||.|-.  |-..|....+|..|.+.+|...
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~avh~s~   49 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSD   49 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSC
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHHHhhhc
Confidence            345667754  6667777777777775555443

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.20  E-value=0.33  Score=17.10  Aligned_cols=20  Identities=25%  Similarity=0.693  Sum_probs=14.0

Q ss_pred             eeCc--hhhhhccChhHHHHHH
Q psy14147         29 YACE--ECGKAFRKKFSLTMHQ   48 (100)
Q Consensus        29 ~~c~--~C~~~f~~~~~l~~h~   48 (100)
                      |.|+  .|+-+|..++++..|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhf   24 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHF   24 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHH
Confidence            4554  3777788888877776

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.04  E-value=0.3  Score=17.05  Aligned_cols=18  Identities=33%  Similarity=0.552  Sum_probs=11.3

Q ss_pred             ccccccChhHHHHHHHhc
Q psy14147         63 CLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        63 c~~~~~~~~~l~~h~~~~   80 (100)
                      |.+.|...+.+..|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            666666666666665554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.47  E-value=0.3  Score=16.79  Aligned_cols=18  Identities=33%  Similarity=0.552  Sum_probs=8.5

Q ss_pred             ccccccChhHHHHHHHhc
Q psy14147         63 CLARFVTNSSLIVHKQRH   80 (100)
Q Consensus        63 c~~~~~~~~~l~~h~~~~   80 (100)
                      |+++|..-..|..|+-+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            445554444444444433

>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus stearothermophilus [TaxId: 1422]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.76  E-value=0.12  Score=19.60  Aligned_cols=7  Identities=43%  Similarity=0.748  Sum_probs=3.0

Q ss_pred             ccCcccc
Q psy14147         58 YQCDLCL   64 (100)
Q Consensus        58 ~~c~~c~   64 (100)
                      -.|+.|+
T Consensus        23 g~CD~cG   29 (35)
T d1zina2          23 GVCDKCG   29 (35)
T ss_dssp             TBCTTTC
T ss_pred             CcCCCCC
Confidence            3444444

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.78  E-value=0.43  Score=17.86  Aligned_cols=24  Identities=42%  Similarity=0.797  Sum_probs=15.8

Q ss_pred             eeCchhhhhccChhHHHHHHhhhc
Q psy14147         29 YACEECGKAFRKKFSLTMHQRHVH   52 (100)
Q Consensus        29 ~~c~~C~~~f~~~~~l~~h~~~~~   52 (100)
                      ..|..|-.+|....++..|+-.+|
T Consensus         4 ltclecmrtfkssfsiwrhqvevh   27 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVH   27 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTS
T ss_pred             ccHHHHHHHHHHHHHHHHhhheec
Confidence            456777777777777777764333

>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK, insert "zinc finger" domain {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Escherichia coli [TaxId: 562]

Probab=81.39  E-value=0.2  Score=18.99  Aligned_cols=8  Identities=13%  Similarity=-0.168  Sum_probs=3.5

Q ss_pred             ccCccccc
Q psy14147         58 YQCDLCLA   65 (100)
Q Consensus        58 ~~c~~c~~   65 (100)
                      -.|+.|+.
T Consensus        23 g~CD~cg~   30 (35)
T d1e4va2          23 GKDDVTGE   30 (35)
T ss_dssp             TBCTTTCC
T ss_pred             CcccCCCC
Confidence            34444443

>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK, insert "zinc finger" domain {Bacillus globisporus [TaxId: 1459]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Bacillus globisporus [TaxId: 1459]

Probab=80.19  E-value=0.15  Score=19.37  Aligned_cols=8  Identities=38%  Similarity=1.464  Sum_probs=3.5

Q ss_pred             Cchhhhhc
Q psy14147         31 CEECGKAF   38 (100)
Q Consensus        31 c~~C~~~f   38 (100)
                      |..|+..|
T Consensus         5 C~~CG~~Y   12 (35)
T d1s3ga2           5 CKVCGTSY   12 (35)
T ss_dssp             ETTTCCEE
T ss_pred             CcCcCchh
Confidence            44444443