Psyllid ID: psy14167
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| 157135444 | 384 | hypothetical protein AaeL_AAEL003238 [Ae | 0.935 | 0.830 | 0.400 | 1e-73 | |
| 157133525 | 384 | hypothetical protein AaeL_AAEL012784 [Ae | 0.941 | 0.835 | 0.396 | 5e-73 | |
| 170029693 | 382 | zinc finger DHHC domain containing prote | 0.950 | 0.848 | 0.384 | 1e-69 | |
| 357614840 | 343 | hypothetical protein KGM_10883 [Danaus p | 0.914 | 0.909 | 0.4 | 2e-69 | |
| 118785120 | 380 | AGAP004856-PA [Anopheles gambiae str. PE | 0.920 | 0.826 | 0.383 | 3e-69 | |
| 195036582 | 381 | GH18968 [Drosophila grimshawi] gi|193893 | 0.929 | 0.832 | 0.398 | 3e-68 | |
| 195144074 | 381 | GL23902 [Drosophila persimilis] gi|19845 | 0.917 | 0.821 | 0.409 | 9e-68 | |
| 195349870 | 381 | GM10369 [Drosophila sechellia] gi|194123 | 0.920 | 0.824 | 0.399 | 2e-67 | |
| 194907631 | 381 | GG11528 [Drosophila erecta] gi|190656226 | 0.917 | 0.821 | 0.403 | 3e-67 | |
| 195108913 | 381 | GI23298 [Drosophila mojavensis] gi|19391 | 0.947 | 0.847 | 0.4 | 4e-67 |
| >gi|157135444|ref|XP_001656662.1| hypothetical protein AaeL_AAEL003238 [Aedes aegypti] gi|108881291|gb|EAT45516.1| AAEL003238-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/332 (40%), Positives = 203/332 (61%), Gaps = 13/332 (3%)
Query: 6 VEPIFWVVDSVLISIGPFLTVLVIFISGFTVFIAYWILFPFYRRQSEWLAYTLAVIGNWI 65
+EPIFW VD+ +GPF V+ ++ V I YWI P++ ++S Y L V+GNW+
Sbjct: 49 LEPIFWFVDNFTHLLGPFFVFAVVCLTAAVVIICYWIGLPYWWKKSPNTTYFLLVVGNWL 108
Query: 66 LINFVFNYYMGFSTSPGHPPKHSVSSKSSDVCKKCLTPKPPRTHHCSICDQCILKMDHHC 125
L+N FN+Y +TSPG+PP+ + ++ +CKKC+ PKPPRTHHCS+C++C+LKMDHHC
Sbjct: 109 LVNVAFNFYKAAATSPGYPPEKELIIEAVSICKKCIAPKPPRTHHCSVCNRCVLKMDHHC 168
Query: 126 PWMNHCVGHWNHRYFYMFMIYTLLGCAFLFIIGYRPAYSILVANSKHFDFHYENVHDVLA 185
PW+N+CVG+ NHRYF+++M+YT +G F+ + G+ Y++L+ E +H
Sbjct: 169 PWLNNCVGYGNHRYFFLYMLYTTVGVLFIIVFGFELGYNVLIVGDGEGWNEVEPLHGHPV 228
Query: 186 A-------IPEGKLGRRDTMFFRSSFQPMK--IPLSYYLETYQFRYKSLMFLSLVLCVIF 236
IP ++ + P K +P+ + ++++++F++L+
Sbjct: 229 RFNLSGHIIPVTEMND----YVDDGLAPAKHDLPVPQEYSSNAAKHRAIIFMALINVATL 284
Query: 237 CAVLTLSLWHAKLISGGETSVEFLKNKYEMTKKKKEGGTFKNPFDFGWKTNWRIFLGLYG 296
A+ L+ WH+ LI+ GETS+E NK E + G +++NP+DFG + NWR+FLGL
Sbjct: 285 FALGALTSWHSSLITRGETSIEAHINKSETKRLSALGKSYQNPYDFGPRRNWRLFLGLVR 344
Query: 297 GRTIWRHILLPSTHKPLDNGVTWTTSEDIQAM 328
RT WRHILLPS HKP NG+TW T D A+
Sbjct: 345 KRTWWRHILLPSGHKPEGNGLTWLTVNDFIAI 376
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157133525|ref|XP_001662877.1| hypothetical protein AaeL_AAEL012784 [Aedes aegypti] gi|108870794|gb|EAT35019.1| AAEL012784-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|170029693|ref|XP_001842726.1| zinc finger DHHC domain containing protein 16 [Culex quinquefasciatus] gi|167864045|gb|EDS27428.1| zinc finger DHHC domain containing protein 16 [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|357614840|gb|EHJ69313.1| hypothetical protein KGM_10883 [Danaus plexippus] | Back alignment and taxonomy information |
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| >gi|118785120|ref|XP_314335.3| AGAP004856-PA [Anopheles gambiae str. PEST] gi|116128105|gb|EAA09699.3| AGAP004856-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|195036582|ref|XP_001989749.1| GH18968 [Drosophila grimshawi] gi|193893945|gb|EDV92811.1| GH18968 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
| >gi|195144074|ref|XP_002013021.1| GL23902 [Drosophila persimilis] gi|198451219|ref|XP_002137257.1| GA27100 [Drosophila pseudoobscura pseudoobscura] gi|194101964|gb|EDW24007.1| GL23902 [Drosophila persimilis] gi|198131389|gb|EDY67815.1| GA27100 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
| >gi|195349870|ref|XP_002041465.1| GM10369 [Drosophila sechellia] gi|194123160|gb|EDW45203.1| GM10369 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
| >gi|194907631|ref|XP_001981588.1| GG11528 [Drosophila erecta] gi|190656226|gb|EDV53458.1| GG11528 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
| >gi|195108913|ref|XP_001999037.1| GI23298 [Drosophila mojavensis] gi|193915631|gb|EDW14498.1| GI23298 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| FB|FBgn0039489 | 381 | CG5880 [Drosophila melanogaste | 0.929 | 0.832 | 0.379 | 1.2e-58 | |
| MGI|MGI:1921418 | 361 | Zdhhc16 "zinc finger, DHHC dom | 0.434 | 0.409 | 0.434 | 1.1e-48 | |
| UNIPROTKB|Q969W1 | 377 | ZDHHC16 "Probable palmitoyltra | 0.434 | 0.392 | 0.434 | 1.4e-48 | |
| ZFIN|ZDB-GENE-040426-1621 | 387 | zdhhc16a "zinc finger, DHHC do | 0.909 | 0.801 | 0.324 | 2e-47 | |
| UNIPROTKB|Q58CU4 | 377 | ZDHHC16 "Probable palmitoyltra | 0.434 | 0.392 | 0.427 | 6.8e-47 | |
| UNIPROTKB|F1S8Y3 | 377 | LOC100152371 "Uncharacterized | 0.434 | 0.392 | 0.427 | 8.6e-47 | |
| UNIPROTKB|E1BZS7 | 361 | ZDHHC16 "Uncharacterized prote | 0.466 | 0.440 | 0.407 | 1.8e-46 | |
| UNIPROTKB|E2RT02 | 377 | ZDHHC16 "Uncharacterized prote | 0.434 | 0.392 | 0.434 | 7.6e-46 | |
| ZFIN|ZDB-GENE-040426-1301 | 386 | zdhhc16b "zinc finger, DHHC do | 0.888 | 0.784 | 0.344 | 5e-44 | |
| UNIPROTKB|H0Y536 | 301 | ZDHHC16 "Probable palmitoyltra | 0.434 | 0.491 | 0.434 | 3.2e-43 |
| FB|FBgn0039489 CG5880 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 123/324 (37%), Positives = 175/324 (54%)
Query: 8 PIFWVVDSVLISIGPFLTVLVIFISGFTVFIAYWILFPFYRRQSEWLAYTLAVIGNWILI 67
PIFW VD+ +GPF V V ++ V IAYWI PF+ +S+ + Y L ++GNW+L+
Sbjct: 50 PIFWFVDNYTHCLGPFFVVGVAALTTSVVSIAYWIGLPFWWAKSQLVTYFLLIVGNWLLL 109
Query: 68 NFVFNYYMGFSTSPGXXXXXXXXXXXXXXXXXXLTPKPPRTHHCSICDQCILKMDHHCPW 127
N VF+Y M T G + PKPPRTHHCSIC++CILKMDHHCPW
Sbjct: 110 NVVFHYVMAVITPAGHPPEGVSLVEAVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPW 169
Query: 128 MNHCVGHWNHRYFYMFMIYTLLGCAFLFIIGYRPAYSIL-VANSKHFD----FHYENVHD 182
+N+CVG+ NHRYF+++M YT LGC FL + G + L + + +++ + V
Sbjct: 170 LNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKF 229
Query: 183 VLAA--IPEGKLGRRDTMFFRSSFQPMKIPLSYYLETYQFRYKSLMFLSLVLCVIFCAVL 240
L+ IP D + + P+ R ++L F++ + A+
Sbjct: 230 NLSGHIIPVTHPNEYDEFVLPPAVHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLALG 289
Query: 241 TLSLWHAKLISGGETSVEFLXXXXXXXXXXXXXXXXXXPFDFGWKTNWRIFLGLYGGRTI 300
+LS+WHAKLI+ GETSVE P++FG K NW++FLGL GR+
Sbjct: 290 SLSIWHAKLITRGETSVEAHINEAERKRHLQQQRIYINPYNFGTKKNWKLFLGLVRGRSF 349
Query: 301 WRHILLPSTHKPLDNGVTWTTSED 324
WR +LLPS HKP G+++ T D
Sbjct: 350 WRTVLLPSWHKPEGTGLSFHTVND 373
|
|
| MGI|MGI:1921418 Zdhhc16 "zinc finger, DHHC domain containing 16" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q969W1 ZDHHC16 "Probable palmitoyltransferase ZDHHC16" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-1621 zdhhc16a "zinc finger, DHHC domain containing 16a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q58CU4 ZDHHC16 "Probable palmitoyltransferase ZDHHC16" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S8Y3 LOC100152371 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BZS7 ZDHHC16 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RT02 ZDHHC16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-1301 zdhhc16b "zinc finger, DHHC domain containing 16b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H0Y536 ZDHHC16 "Probable palmitoyltransferase ZDHHC16" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| pfam01529 | 167 | pfam01529, zf-DHHC, DHHC palmitoyltransferase | 3e-27 | |
| COG5273 | 309 | COG5273, COG5273, Uncharacterized protein containi | 2e-22 |
| >gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-27
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 17/131 (12%)
Query: 70 VFNYYMGFSTSPGHPPK----------------HSVSSKSSDVCKKCLTPKPPRTHHCSI 113
+++Y+ T PG+ PK C C KPPR+HHC +
Sbjct: 1 LWSYFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRV 60
Query: 114 CDQCILKMDHHCPWMNHCVGHWNHRYFYMFMIYTLLGCAFLFIIGYRPAYSILVANSKHF 173
C++C+L+ DHHCPW+N+C+G NH+YF +F++Y L L ++ + L+ N + F
Sbjct: 61 CNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFY-YLVYLIRNIELF 119
Query: 174 DFHYENVHDVL 184
F ++ +
Sbjct: 120 FFLILSLFSSI 130
|
This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167 |
| >gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| KOG1313|consensus | 309 | 100.0 | ||
| KOG1314|consensus | 414 | 100.0 | ||
| KOG1315|consensus | 307 | 100.0 | ||
| KOG1311|consensus | 299 | 100.0 | ||
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 100.0 | |
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 100.0 | |
| KOG1312|consensus | 341 | 99.97 | ||
| KOG0509|consensus | 600 | 99.96 | ||
| KOG1314|consensus | 414 | 92.89 | ||
| COG5273 | 309 | Uncharacterized protein containing DHHC-type Zn fi | 92.01 | |
| PF13240 | 23 | zinc_ribbon_2: zinc-ribbon domain | 89.84 | |
| KOG1311|consensus | 299 | 88.26 | ||
| PF01529 | 174 | zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 | 86.01 | |
| PF13248 | 26 | zf-ribbon_3: zinc-ribbon domain | 84.58 | |
| PRK04136 | 48 | rpl40e 50S ribosomal protein L40e; Provisional | 83.38 |
| >KOG1313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-52 Score=362.12 Aligned_cols=292 Identities=35% Similarity=0.594 Sum_probs=222.7
Q ss_pred CcccchHHHHHhhhhhccchhhHHHHHHHHHHHHhheeeeeeccccccchhHHHH-HHHHHHHHHHHHHHHHHHhhccCC
Q psy14167 3 HAFVEPIFWVVDSVLISIGPFLTVLVIFISGFTVFIAYWILFPFYRRQSEWLAYT-LAVIGNWILINFVFNYYMGFSTSP 81 (341)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~g~~~~~l~~~l~~~~~~~~~~~~lp~~~~~~~~~~~~-~~~~~~~l~~~~~~~y~~~~~tdP 81 (341)
|-|..|+.|+++..++-+||+++++|.......+.+.++...|+..........+ ......+++.++++.|+++..+.|
T Consensus 14 ~~c~~pl~~~l~s~~~~~g~~~~~~V~~~~~~~~~t~~fi~~~f~~~~~~~~~~f~~~~l~i~~l~nvi~hy~ka~t~pP 93 (309)
T KOG1313|consen 14 DICLGPLNLVLPSYARCFGPFLVGAVTNQNTVRVETKSFILRPFRDVILAVFMLFLLATLAIYLLSNVIFHYYKARTKPP 93 (309)
T ss_pred hhhhhHHHHhcccccccCCCeEEEEEEeeccchhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccCC
Confidence 4477899999999999999999999988888888888888888766444333222 223335788888888999887764
Q ss_pred CCCCCCCCcccccccccccccCCCCCCcCCcccCccccCCCccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14167 82 GHPPKHSVSSKSSDVCKKCLTPKPPRTHHCSICDQCILKMDHHCPWMNHCVGHWNHRYFYMFMIYTLLGCAFLFIIGYRP 161 (341)
Q Consensus 82 G~~p~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CVlr~DHHCpwi~nCVG~~N~r~FilFL~~~~l~~~~~~~~~~~~ 161 (341)
...+..+....|.+|+.+||||+||||.|||||+||||||||+|||||++|||||++|++|+.+++.++.+.+.+.
T Consensus 94 ----vgn~~~~~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~ 169 (309)
T KOG1313|consen 94 ----VGNPGLENDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYT 169 (309)
T ss_pred ----cCCCCCccccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556678889999999999999999999999999999999999999999999999999999999999976654432
Q ss_pred HHHHHHhccCccccccccchhhhccccCCccCcccccccccccCCCCccccchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q psy14167 162 AYSILVANSKHFDFHYENVHDVLAAIPEGKLGRRDTMFFRSSFQPMKIPLSYYLETYQFRYKSLMFLSLVLCVIFCAVLT 241 (341)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~l~~~~~~~l~~ 241 (341)
....+ ..-+....|.++ ...+.+ +|. -..............+.++++.++++++.
T Consensus 170 w~~~l--e~~~~~tay~~d---------------------~~h~~P-p~~-i~r~~~~i~~t~~~~~~fls~~~lv~vg~ 224 (309)
T KOG1313|consen 170 WIDHL--EPIEEITAYASD---------------------VAHVAP-PPS-ILRVYKNITRTSIANLWFLSVRVLVAVGL 224 (309)
T ss_pred HHHhc--chHhhcccccCc---------------------ccccCC-Chh-hhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 22111 100001111000 001111 110 01122333344456677888889999999
Q ss_pred HHHHHHHHHHhCCchHHHHHhHHHHhhhhhcCCcccCCCCcchHhhHHHhccCCCCCcceeeeecCCCCCCCCCCceecc
Q psy14167 242 LSLWHAKLISGGETSVEFLKNKYEMTKKKKEGGTFKNPFDFGWKTNWRIFLGLYGGRTIWRHILLPSTHKPLDNGVTWTT 321 (341)
Q Consensus 242 l~~~h~~li~~n~TTiE~~~~~~~~~~~~~~~~~~~npyd~G~~~N~~~vfG~~~~~~W~~~~~~P~~~~p~~dG~~~~~ 321 (341)
+..||.++|++|.|++|.+++.+++++...++. +||++.|.+.||+.++|..+.+..|.+.++|+.++|.+.|-.|+.
T Consensus 225 l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a~~R--~~~~n~g~k~nWr~fLg~~~~r~~wk~v~lPt~~~p~~~~~~~~~ 302 (309)
T KOG1313|consen 225 LTAWHAVLISRGETSIEQLINIKERKRYLAHLR--SNPTNFGGKANWRNFLGLFRGRHFWKTVLLPTIRKPVKYGDSKEK 302 (309)
T ss_pred HHHHhheeeehhhhhHHHHHHHHHhHhHHHhcc--CCCcccchHHHHHHhhccccCCceeEEEeccccccccccCCcccc
Confidence 999999999999999999999888777655544 899999999999999998888855568999999999999999996
Q ss_pred CccH
Q psy14167 322 SEDI 325 (341)
Q Consensus 322 ~~~~ 325 (341)
++-+
T Consensus 303 ~da~ 306 (309)
T KOG1313|consen 303 SDAY 306 (309)
T ss_pred cchh
Confidence 6543
|
|
| >KOG1314|consensus | Back alignment and domain information |
|---|
| >KOG1315|consensus | Back alignment and domain information |
|---|
| >KOG1311|consensus | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1312|consensus | Back alignment and domain information |
|---|
| >KOG0509|consensus | Back alignment and domain information |
|---|
| >KOG1314|consensus | Back alignment and domain information |
|---|
| >COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] | Back alignment and domain information |
|---|
| >PF13240 zinc_ribbon_2: zinc-ribbon domain | Back alignment and domain information |
|---|
| >KOG1311|consensus | Back alignment and domain information |
|---|
| >PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF13248 zf-ribbon_3: zinc-ribbon domain | Back alignment and domain information |
|---|
| >PRK04136 rpl40e 50S ribosomal protein L40e; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| 2ayj_A | 56 | 50S ribosomal protein L40E; Zn-binding, beta-stran | 89.69 |
| >2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7 | Back alignment and structure |
|---|
Probab=89.69 E-value=0.24 Score=32.82 Aligned_cols=42 Identities=26% Similarity=0.475 Sum_probs=31.4
Q ss_pred cCCCCCCCCCCcccccccccccccCCCCCCcCCcccCccccC
Q psy14167 79 TSPGHPPKHSVSSKSSDVCKKCLTPKPPRTHHCSICDQCILK 120 (341)
Q Consensus 79 tdPG~~p~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CVlr 120 (341)
++|...+...........|..|...-|+||.-|+.|+.--+|
T Consensus 4 ~e~~~~~lA~k~~~~k~ICrkC~ARnp~~A~~CRKCg~~~LR 45 (56)
T 2ayj_A 4 TDPAKLQIVQQRVFLKKVCRKCGALNPIRATKCRRCHSTNLR 45 (56)
T ss_dssp CCSCCSSTTTTCSCCCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred cchhHHHHHHHHHhchhhhccccCcCCcccccccCCCCCCCC
Confidence 356555544445556789999999999999999998865443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| d2ayja1 | 56 | Ribosomal protein L40e {Sulfolobus solfataricus [T | 92.79 |
| >d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Rubredoxin-like superfamily: Zn-binding ribosomal proteins family: Ribosomal protein L40e domain: Ribosomal protein L40e species: Sulfolobus solfataricus [TaxId: 2287]
Probab=92.79 E-value=0.036 Score=34.91 Aligned_cols=38 Identities=26% Similarity=0.496 Sum_probs=27.9
Q ss_pred cCCCCCCCCCCcccccccccccccCCCCCCcCCcccCc
Q psy14167 79 TSPGHPPKHSVSSKSSDVCKKCLTPKPPRTHHCSICDQ 116 (341)
Q Consensus 79 tdPG~~p~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~ 116 (341)
+||.-..-..........|..|...-|+||..|+.|+.
T Consensus 4 ~eP~l~~lA~k~~~~k~ICrkC~AR~p~rAt~CRKCg~ 41 (56)
T d2ayja1 4 TDPAKLQIVQQRVFLKKVCRKCGALNPIRATKCRRCHS 41 (56)
T ss_dssp CCSCCSSTTTTCSCCCEEETTTCCEECTTCSSCTTTCC
T ss_pred cCHHHHHHHHHHhhhhHHHhhccccCCccccccccCCC
Confidence 45544333334445678999999999999999998765
|