Psyllid ID: psy14169

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
Protein Sequence
MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHRERNKTRGKMITECEELSERD
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEHccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccc
Coil and Loop (DISEMBL)
MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLwlgvplhrvpltkpqDLARIISEFALEYRTTRERVIQTREKKASHRERNKTRGKMITECEELSERD
Flexible Loop (DISEMBL)
mseflsdtAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEfaleyrttrerviqtrekkashrernktrgkmiteceelserd
Low Complexity Region (SEG)
MSEFLSDTAQRIIVLSIvhrrvlhrfhrfCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHRERNKTRGKMITECEELSERD
Disordered region (IsUnstruct)
*******TAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRE*********************************
Disordered Region (DISOPRED)
*SEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRE*********************************
Disordered Region (DISEMBL)
********AQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRER*****************RGKMITECEELSERD
Disordered Region (DISPRO)
MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHR*********IT*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHRERNKTRGKMITECEELSERD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	97	2.2.26 [Sep-21-2011]
Q2V2M9	1422	FH1/FH2 domain-containing	yes	N/A	0.969	0.066	0.606	3e-27
Q76LL6	1578	FH1/FH2 domain-containing	yes	N/A	0.969	0.059	0.606	3e-27
Q9Y613	1164	FH1/FH2 domain-containing	no	N/A	0.969	0.080	0.5	5e-19
Q6P9Q4	1197	FH1/FH2 domain-containing	no	N/A	0.969	0.078	0.478	2e-18

>sp|Q2V2M9|FHOD3_HUMAN FH1/FH2 domain-containing protein 3 OS=Homo sapiens GN=FHOD3 PE=1 SV=2

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/94 (60%), Positives = 73/94 (77%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MSEFL D A+RII+L IVHRR+++RFH F L++G P + +         RIISEFALEYR
Sbjct: 1195 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1254

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
            TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct: 1255 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 1288

Actin-organizing protein that may cause stress fiber formation together with cell elongation.
Homo sapiens (taxid: 9606)

>sp|Q76LL6|FHOD3_MOUSE FH1/FH2 domain-containing protein 3 OS=Mus musculus GN=Fhod3 PE=1 SV=1

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/94 (60%), Positives = 73/94 (77%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MSEFL D A+RII+L IVHRR+++RFH F L++G P + +         RIISEFALEYR
Sbjct: 1351 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1410

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
            TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct: 1411 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 1444

Actin-organizing protein that may cause stress fiber formation together with cell elongation.

Mus musculus (taxid: 10090)

>sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo sapiens GN=FHOD1 PE=1 SV=3

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 64/94 (68%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            ++ FL   A+R+ +L IVHRRV +RFH F L+LG         +       + EFALEYR
Sbjct: 929  LTHFLDQCARRVAMLRIVHRRVCNRFHAFLLYLGYTPQAAREVRIMQFCHTLREFALEYR 988

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
            T RERV+Q ++K+A++RERNKTRG+MITE E+ S
Sbjct: 989  TCRERVLQQQQKQATYRERNKTRGRMITETEKFS 1022

Required for the assembly of F-actin structures, such as stress fibers. Depends on the Rho-ROCK cascade for its activity. Contributes to the coordination of microtubules with actin fibers and plays a role in cell elongation. Acts synergistically with ROCK1 to promote SRC-dependent non-apoptotic plasma membrane blebbing.

Homo sapiens (taxid: 9606)

>sp|Q6P9Q4|FHOD1_MOUSE FH1/FH2 domain-containing protein 1 OS=Mus musculus GN=Fhod1 PE=2 SV=3

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 64/94 (68%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            ++ FL+   +R+ +L +VHRRV +RFH F L+LG         +       + EFALEYR
Sbjct: 961  LTHFLAQCTRRVAMLRVVHRRVCNRFHAFLLYLGYTPQAARDVRIMQFCHTLREFALEYR 1020

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
            T RERV+Q ++K+A++RERNKTRG+MITE E+ S
Sbjct: 1021 TCRERVLQQQQKRATYRERNKTRGRMITETEKFS 1054

Required for the assembly of F-actin structures, such as stress fibers. Depends on the Rho-ROCK cascade for its activity. Contributes to the coordination of microtubules with actin fibers and plays a role in cell elongation. Acts synergistically with ROCK1 to promote SRC-dependent non-apoptotic plasma membrane blebbing.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
328703440	1885	PREDICTED: hypothetical protein LOC10015	1.0	0.051	0.711	2e-35
328703442	1928	PREDICTED: hypothetical protein LOC10015	1.0	0.050	0.711	2e-35
328703438	1927	PREDICTED: hypothetical protein LOC10015	1.0	0.050	0.711	2e-35
383865148	1140	PREDICTED: FH1/FH2 domain-containing pro	0.927	0.078	0.755	4e-34
251829648	1161	jazigo [Apis mellifera]	0.927	0.077	0.755	5e-34
307180845	1134	FH1/FH2 domain-containing protein 3 [Cam	0.927	0.079	0.733	5e-33
307191734	979	FH1/FH2 domain-containing protein 3 [Har	0.927	0.091	0.744	5e-33
332021730	1116	FH1/FH2 domain-containing protein 3 [Acr	0.927	0.080	0.733	5e-33
322798807	1135	hypothetical protein SINV_01606 [Solenop	0.927	0.079	0.733	6e-33
340714873	2697	PREDICTED: hypothetical protein LOC10064	0.917	0.032	0.764	2e-32

>gi|328703440|ref|XP_003242204.1| PREDICTED: hypothetical protein LOC100159326 isoform 2 [Acyrthosiphon pisum]

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 85/97 (87%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MSEFL+D A+RI+VL  VHRRV++RF++FCLWLG+PLH+V LTKP +L RI+SEF+LEYR
Sbjct: 1688 MSEFLADCAERIVVLGKVHRRVMNRFNKFCLWLGIPLHKVQLTKPNELCRIVSEFSLEYR 1747

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITECEELSERD 97
            TTRERVIQ   KKASHRERNKTRGKMITE  ++ ++D
Sbjct: 1748 TTRERVIQQLHKKASHRERNKTRGKMITEVGKIDKQD 1784

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703442|ref|XP_003242205.1| PREDICTED: hypothetical protein LOC100159326 isoform 3 [Acyrthosiphon pisum]

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 85/97 (87%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MSEFL+D A+RI+VL  VHRRV++RF++FCLWLG+PLH+V LTKP +L RI+SEF+LEYR
Sbjct: 1731 MSEFLADCAERIVVLGKVHRRVMNRFNKFCLWLGIPLHKVQLTKPNELCRIVSEFSLEYR 1790

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITECEELSERD 97
            TTRERVIQ   KKASHRERNKTRGKMITE  ++ ++D
Sbjct: 1791 TTRERVIQQLHKKASHRERNKTRGKMITEVGKIDKQD 1827

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703438|ref|XP_001949851.2| PREDICTED: hypothetical protein LOC100159326 isoform 1 [Acyrthosiphon pisum]

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 85/97 (87%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MSEFL+D A+RI+VL  VHRRV++RF++FCLWLG+PLH+V LTKP +L RI+SEF+LEYR
Sbjct: 1730 MSEFLADCAERIVVLGKVHRRVMNRFNKFCLWLGIPLHKVQLTKPNELCRIVSEFSLEYR 1789

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITECEELSERD 97
            TTRERVIQ   KKASHRERNKTRGKMITE  ++ ++D
Sbjct: 1790 TTRERVIQQLHKKASHRERNKTRGKMITEVGKIDKQD 1826

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865148|ref|XP_003708037.1| PREDICTED: FH1/FH2 domain-containing protein 3-like [Megachile rotundata]

 Score =  148 bits (374), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 79/90 (87%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MS+FL+D A+RIIVL IVHRR+++RFH+F LWLG+PLHRV  TKP +  RI+SEFALEYR
Sbjct: 940  MSDFLADCAERIIVLGIVHRRIINRFHKFVLWLGIPLHRVQDTKPNEFCRIVSEFALEYR 999

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITEC 90
            TTRERVIQ  EKKA+HRERNKTRGKMITE 
Sbjct: 1000 TTRERVIQQLEKKANHRERNKTRGKMITEV 1029

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|251829648|gb|ACT21202.1| jazigo [Apis mellifera]

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 79/90 (87%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MS+FL+D A+RIIVL IVHRR+++RFH+F LWLG+PLHRV  TKP +  RI+SEFALEYR
Sbjct: 961  MSDFLADCAERIIVLGIVHRRIINRFHKFILWLGIPLHRVQDTKPNEFCRIVSEFALEYR 1020

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITEC 90
            TTRERVIQ  EKKA+HRERNKTRGKMITE 
Sbjct: 1021 TTRERVIQQLEKKANHRERNKTRGKMITEV 1050

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180845|gb|EFN68683.1| FH1/FH2 domain-containing protein 3 [Camponotus floridanus]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 66/90 (73%), Positives = 79/90 (87%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
           MS+FL+D A+RIIVL+IVHRR+++RF +F LWLG+PLHR+  TKP +  RI+SEFALEYR
Sbjct: 907 MSDFLADCAERIIVLNIVHRRIINRFRKFILWLGIPLHRIQDTKPNEFCRIVSEFALEYR 966

Query: 61  TTRERVIQTREKKASHRERNKTRGKMITEC 90
           TTRERVIQ  EKKA+HRERNKTRGKMITE 
Sbjct: 967 TTRERVIQQLEKKANHRERNKTRGKMITEV 996

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191734|gb|EFN75176.1| FH1/FH2 domain-containing protein 3 [Harpegnathos saltator]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/90 (74%), Positives = 78/90 (86%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
           MS+FL+D A+RIIVL IVHRR+++RF +F LWLG+PLHRV  TKP +  RI+SEFALEYR
Sbjct: 763 MSDFLADCAERIIVLGIVHRRIINRFRKFILWLGIPLHRVQDTKPNEFCRIVSEFALEYR 822

Query: 61  TTRERVIQTREKKASHRERNKTRGKMITEC 90
           TTRERVIQ  EKKA+HRERNKTRGKMITE 
Sbjct: 823 TTRERVIQQLEKKANHRERNKTRGKMITEV 852

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021730|gb|EGI62086.1| FH1/FH2 domain-containing protein 3 [Acromyrmex echinatior]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 66/90 (73%), Positives = 78/90 (86%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
           MS+FL+D A+RIIVL IVHRR+++RF +F LWLG+PLHR+  TKP +  RI+SEFALEYR
Sbjct: 909 MSDFLADCAERIIVLGIVHRRIINRFRKFILWLGIPLHRIQDTKPNEFCRIVSEFALEYR 968

Query: 61  TTRERVIQTREKKASHRERNKTRGKMITEC 90
           TTRERVIQ  EKKA+HRERNKTRGKMITE 
Sbjct: 969 TTRERVIQQLEKKANHRERNKTRGKMITEV 998

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798807|gb|EFZ20354.1| hypothetical protein SINV_01606 [Solenopsis invicta]

 Score =  144 bits (364), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 66/90 (73%), Positives = 78/90 (86%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MS+FL+D A+RIIVL IVHRR+++RF +F LWLG+PLHR+  TKP +  RI+SEFALEYR
Sbjct: 940  MSDFLADCAERIIVLDIVHRRIINRFRKFILWLGIPLHRIQDTKPNEFCRIVSEFALEYR 999

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITEC 90
            TTRERVIQ  EKKA+HRERNKTRGKMITE 
Sbjct: 1000 TTRERVIQQLEKKANHRERNKTRGKMITEV 1029

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714873|ref|XP_003395947.1| PREDICTED: hypothetical protein LOC100648204 [Bombus terrestris]

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/89 (76%), Positives = 79/89 (88%)

Query: 1    MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
            MS+FL+D A+RIIVL IVHRR+++RFH+F LWLG+PLHRV  TKP +  RI+SEFALEYR
Sbjct: 2498 MSDFLADCAERIIVLGIVHRRIINRFHKFILWLGIPLHRVQDTKPNEFCRIVSEFALEYR 2557

Query: 61   TTRERVIQTREKKASHRERNKTRGKMITE 89
            TTRERVIQ  EKKA+HRERNKTRGKMITE
Sbjct: 2558 TTRERVIQQLEKKANHRERNKTRGKMITE 2586

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
FB|FBgn0261259	2511	Fhos [Drosophila melanogaster	0.979	0.037	0.515	3.2e-19
UNIPROTKB|K7EKZ0	375	FHOD3 "FH1/FH2 domain-containi	0.917	0.237	0.539	4.5e-19
UNIPROTKB|I3LDS5	1443	FHOD3 "Uncharacterized protein	0.979	0.065	0.526	1.2e-18
UNIPROTKB|K7EP24	635	FHOD3 "FH1/FH2 domain-containi	0.969	0.148	0.521	1.4e-18
RGD|2322319	480	Fhod3 "formin homology 2 domai	0.969	0.195	0.510	3.4e-18
UNIPROTKB|K7ER94	1200	FHOD3 "FH1/FH2 domain-containi	0.969	0.078	0.521	4e-18
UNIPROTKB|F1PDT3	1233	FHOD3 "Uncharacterized protein	0.969	0.076	0.521	4.1e-18
UNIPROTKB|I3LBC3	1245	FHOD3 "Uncharacterized protein	0.969	0.075	0.521	4.2e-18
UNIPROTKB|K7EIY5	1303	FHOD3 "FH1/FH2 domain-containi	0.969	0.072	0.521	4.5e-18
UNIPROTKB|J9NVV0	1356	FHOD3 "Uncharacterized protein	0.969	0.069	0.521	4.7e-18

FB|FBgn0261259 Fhos [Drosophila melanogaster (taxid:7227)]

 Score = 247 (92.0 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 49/95 (51%), Positives = 63/95 (66%)

Query:     3 EFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYRTT 62
             +FL+D A+RII+L I             LWLG+P H V  ++P +  R +SEFALEYRTT
Sbjct:  2310 DFLADCAERIIILQIVHRRVMNRYRKFLLWLGMPQHSVAESRPNEFCRTLSEFALEYRTT 2369

Query:    63 RERVIQTREKKASHRERNKTRGKMITECEELSERD 97
             RERV Q  EKKA+HRERNKTRGK+I +  +   +D
Sbjct:  2370 RERVQQQLEKKANHRERNKTRGKLIIDMAKFKTKD 2404

GO:0003779 "actin binding" evidence=IEA;ISS

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003012 "muscle system process" evidence=IEP;IGI

GO:0046716 "muscle cell homeostasis" evidence=IGI;IMP

UNIPROTKB|K7EKZ0 FHOD3 "FH1/FH2 domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 231 (86.4 bits), Expect = 4.5e-19, P = 4.5e-19
 Identities = 48/89 (53%), Positives = 60/89 (67%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:   229 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 288

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITE 89
             TTRERV+Q ++K+A+HRERNKTRGKMIT+
Sbjct:   289 TTRERVLQQKQKRANHRERNKTRGKMITD 317

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|I3LDS5 FHOD3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 239 (89.2 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 50/95 (52%), Positives = 63/95 (66%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:  1208 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1267

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELSE 95
             TTRERV+Q ++K+A+HRERNKTRGKMIT+ +E  E
Sbjct:  1268 TTRERVLQQKQKRANHRERNKTRGKMITDTDEEDE 1302

GO:0045214 "sarcomere organization" evidence=IEA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|K7EP24 FHOD3 "FH1/FH2 domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 233 (87.1 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:   408 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 467

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
             TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct:   468 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 501

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

RGD|2322319 Fhod3 "formin homology 2 domain containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 227 (85.0 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 48/94 (51%), Positives = 61/94 (64%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSE L D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:   253 MSELLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 312

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
             TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct:   313 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 346

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0030837 "negative regulation of actin filament polymerization" evidence=ISO

GO:0045214 "sarcomere organization" evidence=ISO

UNIPROTKB|K7ER94 FHOD3 "FH1/FH2 domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 233 (87.1 bits), Expect = 4.0e-18, P = 4.0e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:   973 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1032

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
             TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct:  1033 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 1066

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|F1PDT3 FHOD3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 233 (87.1 bits), Expect = 4.1e-18, P = 4.1e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:  1006 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1065

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
             TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct:  1066 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 1099

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|I3LBC3 FHOD3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 233 (87.1 bits), Expect = 4.2e-18, P = 4.2e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:  1018 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1077

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
             TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct:  1078 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 1111

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|K7EIY5 FHOD3 "FH1/FH2 domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 233 (87.1 bits), Expect = 4.5e-18, P = 4.5e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:  1076 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1135

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
             TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct:  1136 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 1169

GO:0003779 "actin binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|J9NVV0 FHOD3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 233 (87.1 bits), Expect = 4.7e-18, P = 4.7e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%)

Query:     1 MSEFLSDTAQRIIVLSIXXXXXXXXXXXXCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
             MSEFL D A+RII+L I             L++G P + +         RIISEFALEYR
Sbjct:  1129 MSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYR 1188

Query:    61 TTRERVIQTREKKASHRERNKTRGKMITECEELS 94
             TTRERV+Q ++K+A+HRERNKTRGKMIT+  + S
Sbjct:  1189 TTRERVLQQKQKRANHRERNKTRGKMITDSGKFS 1222

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2V2M9	FHOD3_HUMAN	No assigned EC number	0.6063	0.9690	0.0661	yes	N/A
Q76LL6	FHOD3_MOUSE	No assigned EC number	0.6063	0.9690	0.0595	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	97
KOG1925|consensus	817		100.0
smart00498	432	FH2 Formin Homology 2 Domain. FH proteins control	98.68
PF02181	370	FH2: Formin Homology 2 Domain; InterPro: IPR015425	97.89

>KOG1925|consensus

Probab=100.00  E-value=8.3e-48  Score=329.78  Aligned_cols=95  Identities=52%  Similarity=0.805  Sum_probs=93.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhh
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHRERN   80 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq~~K~a~~ReRn   80 (97)
                      |++||+||||||++||+||||++||||+||||||||+++++++.||+||+||+||||||||||||||||++|+|+|||||
T Consensus       585 ~~~fl~~cA~RI~~LKivhrr~~NRfHSFLLy~Gy~p~aIrev~iN~fc~~~~EFaLEYRTTRervLQQ~qk~A~~RERN  664 (817)
T KOG1925|consen  585 LTHFLDQCARRIAMLKIVHRRVCNRFHSFLLYLGYTPQAIREVRINQFCHTLREFALEYRTTRERVLQQQQKQATYRERN  664 (817)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhchhHhhhhhccc
Q psy14169         81 KTRGKMITECEELSE   95 (97)
Q Consensus        81 KTrGKmit~~~~~s~   95 (97)
                      ||||||||+.|+||+
T Consensus       665 KTRGKmit~~Gkfs~  679 (817)
T KOG1925|consen  665 KTRGKMITETGKFSG  679 (817)
T ss_pred             ccccceeeecccccC
Confidence            999999999999984

>smart00498 FH2 Formin Homology 2 Domain

Probab=98.68  E-value=1.7e-07  Score=76.29  Aligned_cols=86  Identities=26%  Similarity=0.353  Sum_probs=74.1

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhh
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHRERN   80 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq~~K~a~~ReRn   80 (97)
                      |.+|+.+|..++..|+..+..+.+.|.+++.|||.++..   .+|++||.++++|..+|..+++.-+   ++++...+|.
T Consensus       315 m~~F~~~a~~~~~~l~~~~~~~~~~~~~~~~yfge~~~~---~~~~efF~~f~~F~~~f~ka~~en~---~~~~~e~~~~  388 (432)
T smart00498      315 MKPFLKAAKEKYDKLQKDLSDLKTRFEKLVEYYGEDPKD---TSPEEFFKDFNEFLKEFSKAAEENI---KKEEEEEERR  388 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence            568999999999999999999999999999999999995   7999999999999999999988743   3334556788


Q ss_pred             hhhchhHhhhhh
Q psy14169         81 KTRGKMITECEE   92 (97)
Q Consensus        81 KTrGKmit~~~~   92 (97)
                      +.+.|.+++-..
T Consensus       389 ~~~~~~~~~~~~  400 (432)
T smart00498      389 KQLVKETTEYEQ  400 (432)
T ss_pred             HHHHHHHHhhhh
Confidence            888887776433

FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.

>PF02181 FH2: Formin Homology 2 Domain; InterPro: IPR015425 Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis []

Probab=97.89  E-value=3.5e-05  Score=60.46  Aligned_cols=57  Identities=19%  Similarity=0.410  Sum_probs=51.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHH
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR   60 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYR   60 (97)
                      |.+|+.+|..++..|+.-+.++.+.|..++.|||-.++   +.+|++|+.++++|+.+|.
T Consensus       314 ~~~f~~~~~~~~~~l~~~~~~~~~~~~~~~~yfge~~~---~~~~~~ff~~l~~F~~~fk  370 (370)
T PF02181_consen  314 MKEFLEEAETKLDELQELYEELEEAFKQLLQYFGEDPK---KMSPEEFFKILSQFIDMFK  370 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TT---CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---CCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999998887   8889999999999999884

Formins are multidomain proteins that interact with diverse signalling molecules and cytoskeletal proteins, although some formins have been assigned functions within the nucleus. Formins are characterised by the presence of three FH domains (FH1, FH2 and FH3), although members of the formin family do not necessarily contain all three domains []. The proline-rich FH1 domain mediates interactions with a variety of proteins, including the actin-binding protein profilin, SH3 (Src homology 3) domain proteins, and WW domain proteins. The FH2 domain is required for the self-association of formin proteins through the ability of FH2 domains to directly bind each other [], and may also act to inhibit actin polymerisation []. The FH3 domain (IPR010472 from INTERPRO) is less well conserved and may be important for determining intracellular localisation of formin family proteins. In addition, some formins can contain a GTPase-binding domain (GBD) (IPR010473 from INTERPRO) required for binding to Rho small GTPases, and a C-terminal conserved Dia-autoregulatory domain (DAD). This entry represents the FH2 domain, which was shown by X-ray crystallography to have an elongated, crescent shape containing three helical subdomains [].; PDB: 1Y64_B 1UX4_A 1UX5_A 3O4X_H 3OBV_E 1V9D_D 2Z6E_B 2J1D_G.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	97
3obv_E	457	Protein diaphanous homolog 1; autoinhibition, acti	2e-09
1v9d_A	340	Diaphanous protein homolog 1; helix bundle, protei	9e-09
2j1d_G	483	DAAM1, disheveled-associated activator of morphoge	3e-08
1ux5_A	411	BNI1 protein; structural protein, FH2 actin cytosk	3e-06

>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D Length = 457

 Score = 51.4 bits (123), Expect = 2e-09
 Identities = 12/96 (12%), Positives = 33/96 (34%), Gaps = 3/96 (3%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
           M+ F+ D  ++   L ++H  +   +     +      ++     ++    +  F   + 
Sbjct: 321 MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLS---VEEFFMDLHNFRNMFL 377

Query: 61  TTRERVIQTREKKASHRERNKTRGKMITECEELSER 96
              +   + RE +   R     + K   E  E  ++
Sbjct: 378 QAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQK 413

>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1 Length = 340

 Score = 49.8 bits (119), Expect = 9e-09
 Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 3/85 (3%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
           M+ F+ D  ++   L ++H  +   +     +      ++     ++    +  F   + 
Sbjct: 250 MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLS---VEEFFMDLHNFRNMFL 306

Query: 61  TTRERVIQTREKKASHRERNKTRGK 85
              +   + RE +   R     + K
Sbjct: 307 QAVKENQKRRETEEKMRRAKLAKEK 331

>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A Length = 483

 Score = 48.3 bits (115), Expect = 3e-08
 Identities = 11/89 (12%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
           +S+F++  +     +  +       F +     G    ++    P +   I  +F     
Sbjct: 333 VSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQ---PDEFFGIFDQFLQAVS 389

Query: 61  TTRERVIQTREKKASHRERNKTRGKMITE 89
             ++     R+KK     R +   ++  +
Sbjct: 390 EAKQENENMRKKKEEEERRARMEAQLKEQ 418

>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A Length = 411

 Score = 42.6 bits (100), Expect = 3e-06
 Identities = 8/78 (10%), Positives = 25/78 (32%), Gaps = 2/78 (2%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
               L +  ++  +L    +  +  F       G               +  ++F  EY+
Sbjct: 335 TLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKF--AKISFFKKFADFINEYK 392

Query: 61  TTRERVIQTREKKASHRE 78
             + + +   E++  + +
Sbjct: 393 KAQAQNLAAEEEERLYIK 410

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	97
4eah_A	402	Formin-like protein 3, actin, alpha skeletal muscl	99.2
1ux5_A	411	BNI1 protein; structural protein, FH2 actin cytosk	98.94
1v9d_A	340	Diaphanous protein homolog 1; helix bundle, protei	98.81
3obv_E	457	Protein diaphanous homolog 1; autoinhibition, acti	98.8
2j1d_G	483	DAAM1, disheveled-associated activator of morphoge	98.79

>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}

Probab=99.20  E-value=6.5e-11  Score=94.88  Aligned_cols=77  Identities=14%  Similarity=0.280  Sum_probs=66.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhh
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHRERN   80 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq~~K~a~~ReRn   80 (97)
                      |.+||.+|.+++..|+..+.++.+.|++++.|||.+|..   ++|++||.++++|+.+|+.+++...+++++.+.++|+.
T Consensus       318 l~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgedpk~---~~~~~fF~~~~~F~~~fk~A~~en~~r~~~e~~~~~~~  394 (402)
T 4eah_A          318 LRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYFGESPKT---TPPSVFFPVFVRFIRSYKEAEQENEARKKQEEVMREKQ  394 (402)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTT---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            578999999999999999999999999999999999864   68999999999999999999999999999999999874

>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A

Probab=98.94  E-value=2.2e-09  Score=85.02  Aligned_cols=77  Identities=10%  Similarity=0.110  Sum_probs=69.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhh
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTREKKASHRER   79 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq~~K~a~~ReR   79 (97)
                      |.+|+.+|.+.+..|+.-+.++.+.|.+++.|||.++..  +++|++||.++++|+.+|+.+++...++++.++.+..|
T Consensus       335 ~~~fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~--~~~~~~fF~~~~~F~~~f~~a~~en~~~~e~~~~~e~r  411 (411)
T 1ux5_A          335 TLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGD--KFAKISFFKKFADFINEYKKAQAQNLAAEEEERLYIKH  411 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            457999999999999999999999999999999999974  56899999999999999999999999888877765443

>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1

Probab=98.81  E-value=2.8e-08  Score=77.19  Aligned_cols=68  Identities=12%  Similarity=0.188  Sum_probs=61.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTRE   71 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq~~   71 (97)
                      |.+||.+|.+++..|+..|+.+.+.|..++.|||.+|.   +++|++||.++++|.-.|..+.+...++++
T Consensus       250 m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~---~~~~~~fF~~~~~F~~~f~~a~~en~~r~e  317 (340)
T 1v9d_A          250 MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPK---KLSVEEFFMDLHNFRNMFLQAVKENQKRRE  317 (340)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTT---TSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999876   478999999999999999999887765443

>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D

Probab=98.80  E-value=2.6e-08  Score=81.19  Aligned_cols=68  Identities=12%  Similarity=0.188  Sum_probs=61.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTRE   71 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq~~   71 (97)
                      |++||.+|.+.+..|+..|..+.+.|.+++.|||..|.   +++|++||.++++|.-.|..+.+...++++
T Consensus       321 m~~Fl~~A~~~~~~L~~~~~~~~~~~~~l~~yFgedp~---~~~~~eFF~~~~~F~~~fkkA~~eN~~r~e  388 (457)
T 3obv_E          321 MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPK---KLSVEEFFMDLHNFRNMFLQAVKENQKRRE  388 (457)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTT---TSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999875   578999999999999999998877665443

>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A

Probab=98.79  E-value=2.4e-08  Score=81.23  Aligned_cols=65  Identities=11%  Similarity=0.160  Sum_probs=60.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHH
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQ   68 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlq   68 (97)
                      |.+|+.+|.+.+..|+..+..+.+.|.+++.|||.++.   +++|++||.++++|..+|+.+++.+.+
T Consensus       333 m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~---~~~~~~fF~~~~~F~~~f~~A~~en~~  397 (483)
T 2j1d_G          333 VSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAG---KIQPDEFFGIFDQFLQAVSEAKQENEN  397 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTT---SCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999986   468999999999999999999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	97
d1ux5a_	411	a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces	2e-06

>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 411

class: All alpha proteins
fold: Formin homology 2 domain (FH2 domain)
superfamily: Formin homology 2 domain (FH2 domain)
family: Formin homology 2 domain (FH2 domain)
domain: Bni1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.0 bits (98), Expect = 2e-06
 Identities = 8/74 (10%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 1   MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYR 60
               L +  ++  +L    +  +  F       G               +  ++F  EY+
Sbjct: 335 TLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGED--SGDKFAKISFFKKFADFINEYK 392

Query: 61  TTRERVIQTREKKA 74
             + + +   E++ 
Sbjct: 393 KAQAQNLAAEEEER 406

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	97
d1ux5a_	411	Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	98.53
d1v9da_	332	Diaphanous protein homolog 1, dia1 {Mouse (Mus mus	98.44

>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: Formin homology 2 domain (FH2 domain)
superfamily: Formin homology 2 domain (FH2 domain)
family: Formin homology 2 domain (FH2 domain)
domain: Bni1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.53  E-value=1.3e-07  Score=72.69  Aligned_cols=69  Identities=12%  Similarity=0.136  Sum_probs=60.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQTRE   71 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq~~   71 (97)
                      |.+|+.++.+++..|+..+.++.+.|..++.|||.+++  ...+|++||+++++|.-.|+.+++..+++++
T Consensus       335 ~~~fl~~~~~~~~~l~~~~~~~~~~~~~~~~yfGEd~~--~~~~~~~fF~~~~~F~~~~~~a~~en~~~~e  403 (411)
T d1ux5a_         335 TLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSG--DKFAKISFFKKFADFINEYKKAQAQNLAAEE  403 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998774  2467999999999999999999876554443

>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Formin homology 2 domain (FH2 domain)
superfamily: Formin homology 2 domain (FH2 domain)
family: Formin homology 2 domain (FH2 domain)
domain: Diaphanous protein homolog 1, dia1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.44  E-value=6.6e-07  Score=66.91  Aligned_cols=66  Identities=9%  Similarity=0.151  Sum_probs=59.2

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCCCCChhHHHHHHHHHHHHHHhHHHHHHHH
Q psy14169          1 MSEFLSDTAQRIIVLSIVHRRVLHRFHRFCLWLGVPLHRVPLTKPQDLARIISEFALEYRTTRERVIQT   69 (97)
Q Consensus         1 l~~FL~d~aeRI~iL~~VhrRv~NRF~~fLL~lG~s~~~~~~~k~~~fck~iSEFALEYRTtrervlqq   69 (97)
                      |.+|+.++.+.+..|...+..+.+-|..++.|||.+|.   +.+|++||.++++|.-.|..+++...++
T Consensus       245 ~~~Fl~~a~~~l~~l~~~~~~~~~~~~~~~~yfgEd~~---~~~~~efF~~~~~F~~~~~~a~~e~~~~  310 (332)
T d1v9da_         245 MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPK---KLSVEEFFMDLHNFRNMFLQAVKENQKR  310 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTT---TSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999998874   5679999999999999999888765443