Psyllid ID: psy14358

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
Protein Sequence
MVHERKLVLIVVGIFLCLCLLIDFLSIPPDSPNQEDQFALLLSQGLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTSLLES
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHcccccEEEEccccEEEEHHHHHHHHHHcccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccccccEEEEEcccHHHHHHHHHccccccccccccccEEEEEEccccccccccHHEEEEEcccccEEEEEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHEHccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHHcccccccccEEEEHHEEcccccccccccEEEccHHHccccccccccccccEEEcHHHHHHHHHHHHHHcccccccHEHHHHHHHHHccccccccccccccccccccHHHEEEEEccccHHHHHHHHHHHccccccccccccEEEEEcccccccccccHHHHHHHHHHcEEEEEEEEEEEEEEcccHccc
Coil and Loop (DISEMBL)
MVHERKLVLIVVGIFLCLCLLIdflsippdspnqEDQFALLLSqgltssdstwqsssdllppddstrlinltnfeflinppcldtVYLVLIHsapynydkrrlirntwgtRVSVYFFIgetdpsnqtrldiesetyhdivqgrfwdsyrnltYKHTMVFKWVVyncphvkyvfkldddVFMNVIQLDELLtrtlsphgtrnllmcpivweklpvlrtyrsKWRVSFseyrdhfypphchgnallysPDVVFKLYQHLqtdqeyfwvddVFITGIVFSKlnlthakfswwpghdepvVILYSKMDLQHNLSQYILAKLNLThakfswwpghdepvVILYSKmdlqyydphkTLFAYLWEKDYVFKYKYMYVATYVNTSLLES
Flexible Loop (DISEMBL)
MVHERKLVLIVVGIFLCLCLLIDFLSIPPDSPNQEDQFALLLSQGLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFigetdpsnqtrLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLtrtlsphgtrnllmcpivweklpvlRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTSLLES
Low Complexity Region (SEG)
MVHERKLVLIVVGiflclcllidflSIPPDSPNQEDQFALLLSQGltssdstwqsssdllppddsTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTSLLES
Disordered region (IsUnstruct)
*****KLVLIVVGIFLCLCLLIDFLSI***************************************RLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTS****
Disordered Region (DISOPRED)
***ERKL*LIVVGIFLCLCLLIDFLSIPPD********************************DDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTSLL**
Disordered Region (DISEMBL)
MVHERKLVLIVVGIFLCLCLLIDFLSIPPDSPNQEDQFALLLSQGL************LLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTSLLES
Disordered Region (DISPRO)
*VHERKLVLIVVGIFLCLCLLIDFLSIPPDSP******A****QGLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTSL***
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVHERKLVLIVVGIFLCLCLLIDFLSIPPDSPNQEDQFALLLSQGLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLINPPCLDTVYLVLIHSAPYNYDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEPVVILYSKMDLQHNLSQYILAKLNLTHAKFSWWPGHDEPVVILYSKMDLQYYDPHKTLFAYLWEKDYVFKYKYMYVATYVNTSLLES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	381	2.2.26 [Sep-21-2011]
Q99NB2	377	Lactosylceramide 1,3-N-ac	yes	N/A	0.585	0.591	0.321	9e-25
Q864U8	377	Lactosylceramide 1,3-N-ac	yes	N/A	0.608	0.615	0.324	1e-24
Q9BYG0	378	Lactosylceramide 1,3-N-ac	yes	N/A	0.608	0.613	0.313	2e-24
Q9MYM7	326	Beta-1,3-galactosyltransf	N/A	N/A	0.572	0.668	0.333	3e-24
Q7JK26	326	Beta-1,3-galactosyltransf	yes	N/A	0.572	0.668	0.333	3e-24
Q7JK25	326	Beta-1,3-galactosyltransf	N/A	N/A	0.572	0.668	0.333	3e-24
O54904	326	Beta-1,3-galactosyltransf	yes	N/A	0.572	0.668	0.333	3e-24
Q9Y5Z6	326	Beta-1,3-galactosyltransf	no	N/A	0.572	0.668	0.333	3e-24
Q7JK24	326	Beta-1,3-galactosyltransf	N/A	N/A	0.572	0.668	0.333	3e-24
Q9Y2C3	310	Beta-1,3-galactosyltransf	no	N/A	0.601	0.738	0.317	2e-23

>sp|Q99NB2|B3GN5_RAT Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Rattus norvegicus GN=B3gnt5 PE=2 SV=2

 Score =  114 bits (286), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 23/246 (9%)

Query: 84  DTVYLVLIHSAPYNYDKRRLIRNTWGTR----------VSVYFFIGETDPSN----QTRL 129
           D + L+ I +AP NY++R  IR TWG            + + F +G   P      Q RL
Sbjct: 86  DVLLLLFIKTAPENYERRSAIRKTWGNENYVQSQLNANIKILFALGTPHPLKGKELQKRL 145

Query: 130 DIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL 189
             E + YHDI+Q  F DS+ NLT+K  + F W    CPH +++   DDD+F+++  L E 
Sbjct: 146 IWEDQVYHDIIQQDFTDSFHNLTFKFLLQFGWANTFCPHARFLMTADDDIFIHMPNLIEY 205

Query: 190 LTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDV 249
           L + L   G R+  +   V    P +R   SK+ V +  Y+   YP +  G A + S DV
Sbjct: 206 L-QGLEQVGVRDFWIGH-VHRGGPPVRDKSSKYYVPYEMYKWPAYPDYTAGAAYVVSNDV 263

Query: 250 VFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE----PVVILYSKMDL 305
             K+Y+  QT     ++DDVF+ G+  +K+ +      ++ G  +    P +  Y KM  
Sbjct: 264 AAKIYEASQTLNSSMYIDDVFM-GLCANKVGVVPQDHVFFSGEGKIPYHPCI--YEKMIT 320

Query: 306 QHNLSQ 311
            H  SQ
Sbjct: 321 SHGHSQ 326

Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 6

>sp|Q864U8|B3GN5_PIG Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Sus scrofa GN=B3GNT5 PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 128/256 (50%), Gaps = 24/256 (9%)

Query: 74  FEFLIN--PPCL--DTVYLVLIHSAPYNYDKRRLIRNTWGTR----------VSVYFFIG 119
           +++LIN    C   D + L+ + +AP NY++R  IRNTWG            +   F +G
Sbjct: 71  YQYLINHEEKCQAQDVLLLLFVKTAPENYNRRSAIRNTWGNEKYVQSQLNANIKTLFVLG 130

Query: 120 E-TDP----SNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFK 174
             +DP      Q RL  E   Y DI+Q  F DS+ NLT K  + FKW    CPH K++  
Sbjct: 131 TPSDPLMRERLQRRLVWEDHMYSDIIQQDFVDSFYNLTLKFLLQFKWANSFCPHAKFLMT 190

Query: 175 LDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFY 234
            DDD+F+++  L E L ++L   G ++  +   V    P +R   SK+ VS+  Y+   Y
Sbjct: 191 ADDDIFIHMPNLIEYL-QSLEQMGVQDFWIGR-VHHGAPPVRDKSSKYYVSYDMYQWPAY 248

Query: 235 PPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE 294
           P +  G A + S DV  K+Y+  QT     ++DDVF+ G+  +K+ L     +++ G  +
Sbjct: 249 PDYTAGAAYVISGDVATKVYEASQTLNSSLYIDDVFM-GLCANKIGLVPQSHAFFSGEGK 307

Query: 295 PVV--ILYSKMDLQHN 308
                 +Y KM   H 
Sbjct: 308 TPYHPCIYEKMMTSHG 323

Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|Q9BYG0|B3GN5_HUMAN Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Homo sapiens GN=B3GNT5 PE=1 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 23/255 (9%)

Query: 74  FEFLIN--PPCL--DTVYLVLIHSAPYNYDKRRLIRNTWGTR----------VSVYFFIG 119
           +++LIN    C   D + L+ + +AP NYD+R  IR TWG            +   F +G
Sbjct: 73  YQYLINHKEKCQAQDVLLLLFVKTAPENYDRRSGIRRTWGNENYVRSQLNANIKTLFALG 132

Query: 120 ETDPSN----QTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKL 175
             +P      Q +L  E + Y+DI+Q  F DS+ NLT K  M F W    CPH K++   
Sbjct: 133 TPNPLEGEELQRKLAWEDQRYNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTA 192

Query: 176 DDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYP 235
           DDD+F+++  L E L ++L   G ++  +   V    P +R   SK+ VS+  Y+   YP
Sbjct: 193 DDDIFIHMPNLIEYL-QSLEQIGVQDFWIGR-VHRGAPPIRDKSSKYYVSYEMYQWPAYP 250

Query: 236 PHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDEP 295
            +  G A + S DV  K+Y+  QT     ++DDVF+ G+  +K+ +      ++ G  + 
Sbjct: 251 DYTAGAAYVISGDVAAKVYEASQTLNSSLYIDDVFM-GLCANKIGIVPQDHVFFSGEGKT 309

Query: 296 VV--ILYSKMDLQHN 308
                +Y KM   H 
Sbjct: 310 PYHPCIYEKMMTSHG 324

Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Probably plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 6

>sp|Q9MYM7|B3GT1_PONPY Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 22/240 (9%)

Query: 66  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYDKRRLIRNTWG-------TRVSV 114
           TR IN  +FEFLIN P  C   +   ++LI +    +D R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 115 YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSWW 289
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +    ++ F+ W
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGIHPFQNSGFNHW 288

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK26|B3GT1_PANTR Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 22/240 (9%)

Query: 66  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYDKRRLIRNTWG-------TRVSV 114
           TR IN  +FEFLIN P  C   +   ++LI +    +D R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 115 YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSWW 289
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +    ++ F+ W
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGIHPFQNSGFNHW 288

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK25|B3GT1_PANPA Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 22/240 (9%)

Query: 66  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYDKRRLIRNTWG-------TRVSV 114
           TR IN  +FEFLIN P  C   +   ++LI +    +D R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 115 YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSWW 289
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +    ++ F+ W
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGIHPFQNSGFNHW 288

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan paniscus (taxid: 9597)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|O54904|B3GT1_MOUSE Beta-1,3-galactosyltransferase 1 OS=Mus musculus GN=B3galt1 PE=2 SV=2

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 22/240 (9%)

Query: 66  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYDKRRLIRNTWG-------TRVSV 114
           TR IN  +FEFLIN P  C   +   ++LI +    +D R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 115 YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSWW 289
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +    ++ F+ W
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGIHPFQNSGFNHW 288

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9Y5Z6|B3GT1_HUMAN Beta-1,3-galactosyltransferase 1 OS=Homo sapiens GN=B3GALT1 PE=2 SV=1

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 22/240 (9%)

Query: 66  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYDKRRLIRNTWG-------TRVSV 114
           TR IN  +FEFLIN P  C   +   ++LI +    +D R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 115 YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSWW 289
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +    ++ F+ W
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGIHPFQNSGFNHW 288

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK24|B3GT1_GORGO Beta-1,3-galactosyltransferase 1 OS=Gorilla gorilla gorilla GN=B3GALT1 PE=3 SV=1

 Score =  113 bits (282), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 22/240 (9%)

Query: 66  TRLINLTNFEFLINPP--CLDTV--YLVLIHSAPYNYDKRRLIRNTWG-------TRVSV 114
           TR IN  +FEFLIN P  C   +   ++LI +    +D R+ IR TWG        +++ 
Sbjct: 55  TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query: 115 YFFIGE-TDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
            F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct: 115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
           K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct: 175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query: 233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSWW 289
            YPP C G   ++S DV   +Y+          ++DV++ G+   KL +    ++ F+ W
Sbjct: 231 NYPPFCSGTGYIFSADVAELIYK-TSLHTRLLHLEDVYV-GLCLRKLGIHPFQNSGFNHW 288

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Gorilla gorilla gorilla (taxid: 9595)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9Y2C3|B3GT5_HUMAN Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=1 SV=1

 Score =  110 bits (275), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 20/249 (8%)

Query: 73  NFEFLINPPCLDT--VYLVLIHSAPYNYDKRRLIRNTWGT-------RVSVYFFIGETDP 123
           NF  L +  C  T    ++L+ S+     +R  IR TWG        ++  +F +G T  
Sbjct: 43  NFLKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWGKERMVKGKQLKTFFLLGTTSS 102

Query: 124 SNQTR-LDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMN 182
           + +T+ +D ES+ + DI+Q  F D Y NLT K  M  +WV   CP   +V K D D+F+N
Sbjct: 103 AAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFIN 162

Query: 183 VIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNA 242
           V  L ELL   L  + T       +   + P+ + + SKW VS SEY    YPP C G  
Sbjct: 163 VDYLTELL---LKKNRTTRFFTGFLKLNEFPIRQPF-SKWFVSKSEYPWDRYPPFCSGTG 218

Query: 243 LLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLT----HAKFSWWPGHDEPVVI 298
            ++S DV  ++Y ++     Y  ++DVF+ G+   +LN+     H++ +++PG     V 
Sbjct: 219 YVFSGDVASQVY-NVSKSVPYIKLEDVFV-GLCLERLNIRLEELHSQPTFFPGGLRFSVC 276

Query: 299 LYSKMDLQH 307
           L+ ++   H
Sbjct: 277 LFRRIVACH 285

Catalyzes the transfer of Gal to GlcNAc-based acceptors with a preference for the core3 O-linked glycan GlcNAc(beta1,3)GalNAc structure. Can use glycolipid LC3Cer as an efficient acceptor.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
307174938	357	UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc	0.606	0.647	0.470	2e-54
332025130	357	UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc	0.619	0.661	0.465	3e-54
307211407	358	UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc	0.645	0.687	0.450	6e-53
380030215	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.587	0.629	0.476	3e-52
328779723	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.587	0.629	0.476	3e-52
340711970	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.577	0.617	0.475	1e-51
350402524	356	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.577	0.617	0.471	2e-51
328712545	350	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.616	0.671	0.460	4e-51
91079971	335	PREDICTED: similar to AGAP006142-PA [Tri	0.692	0.788	0.399	5e-51
383859071	357	PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N	0.587	0.627	0.463	8e-51

>gi|307174938|gb|EFN65178.1| UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Camponotus floridanus]

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 113/240 (47%), Positives = 158/240 (65%), Gaps = 9/240 (3%)

Query: 56  SSDLLPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYDKRRLIRNTWGTR- 111
           S + LP DD T LIN+T+F F++N  PC  T  + L+L+HSAP N+ KR ++R TWG + 
Sbjct: 70  SINELPSDDKTTLINITDFRFIMNHNPCNRTQPLLLMLVHSAPGNFPKRHVVRETWGQQA 129

Query: 112 --VSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHV 169
             V++ F +G ++   Q+RL+ E++ Y D++QG F D+YRN+TYKH M  KW  Y CP  
Sbjct: 130 PDVTLLFLVGYSE-EYQSRLEEENKKYQDLIQGNFLDAYRNMTYKHVMGLKWATYYCPSA 188

Query: 170 KYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEY 229
           KY+ KLDDDVF+++  + + LTR LSP G R L++C ++     V R++RSKWRVS  EY
Sbjct: 189 KYILKLDDDVFVHLPAMLDFLTRGLSPWGARRLILCDLLSAST-VKRSWRSKWRVSPQEY 247

Query: 230 RDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWW 289
               YP +C G A+LYSPD VF LY+  Q  + YFW+DDV +TG +  K+NLT      W
Sbjct: 248 PGRLYPTYCAGWAILYSPDSVFILYREAQ-KEPYFWIDDVHVTGTLARKVNLTQTSLHSW 306

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025130|gb|EGI65310.1| UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Acromyrmex echinatior]

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/245 (46%), Positives = 159/245 (64%), Gaps = 9/245 (3%)

Query: 51  STWQSSSDLLPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYDKRRLIRNT 107
           ST   S + LP DD + LIN+T+F F++N  PC  T  + L+L+HSAP N+ KR ++R T
Sbjct: 65  STQSYSINELPSDDKSTLINITDFRFIMNHNPCNRTQPLLLMLVHSAPGNFPKRHVVRET 124

Query: 108 WGTR---VSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVY 164
           WG +   V++ F +G ++   Q++L+ E+E Y D++QG F D+YRN+TYKH M  KW  Y
Sbjct: 125 WGQQAPDVTLLFLVGYSE-KYQSKLEKENEKYQDLIQGNFLDAYRNMTYKHVMGLKWATY 183

Query: 165 NCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRV 224
            CP  KY+ KLDDDVF+++  + + LT  LSP G R L++C ++     V R++RSKWRV
Sbjct: 184 YCPSAKYILKLDDDVFVHLPAMLDFLTHGLSPWGARRLILCDLL-SASAVKRSWRSKWRV 242

Query: 225 SFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHA 284
           S  EY    YP +C G A+LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT  
Sbjct: 243 SPREYPGRLYPAYCAGWAILYSPDSVFILYREAQ-KEPYFWIDDVHITGTLARKVNLTQT 301

Query: 285 KFSWW 289
               W
Sbjct: 302 SLHSW 306

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211407|gb|EFN87534.1| UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Harpegnathos saltator]

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 115/255 (45%), Positives = 160/255 (62%), Gaps = 9/255 (3%)

Query: 41  LLSQGLTSSDSTWQSSSDLLPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYN 97
           L+  G  ++ S    S + LP DD + LIN+ +F F IN  PC  T  + L+L+HSAP N
Sbjct: 56  LIFPGNVTTPSPQPYSINELPSDDKSTLINIKDFRFTINHSPCNRTQPLLLMLVHSAPEN 115

Query: 98  YDKRRLIRNTWGTR---VSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYK 154
           + KR ++R TWG +   V++ F IG ++   Q++L+ E++ Y D++QG F D+YRN+TYK
Sbjct: 116 FLKRHVVRETWGQQTPDVTLLFLIGYSE-KYQSKLEEENKKYQDLIQGNFLDAYRNMTYK 174

Query: 155 HTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPV 214
           H M  KW  Y CP  KY+ KLDDDVF+++  + + LT  LSP G R L++C ++     V
Sbjct: 175 HVMGLKWATYYCPSAKYILKLDDDVFVHLPAMLDFLTHGLSPWGARRLILCDLL-SASAV 233

Query: 215 LRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGI 274
            R++RSKWRVS  EY    YP +C G A+LYSPD VF LY+  Q  + YFW+DDV ITG 
Sbjct: 234 KRSWRSKWRVSPQEYPGRLYPAYCAGWAILYSPDSVFILYREAQ-KEPYFWIDDVHITGT 292

Query: 275 VFSKLNLTHAKFSWW 289
           +  K NLT      W
Sbjct: 293 LARKANLTQTSLHSW 307

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030215|ref|XP_003698749.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Apis florea]

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/233 (47%), Positives = 151/233 (64%), Gaps = 9/233 (3%)

Query: 60  LPPDDSTRLINLTNFEFLINP-PCLDT--VYLVLIHSAPYNYDKRRLIRNTWG---TRVS 113
           LP  D + LI++ +F F IN  PC  T  + L+L+HSAP N+ KR ++R TWG   + V+
Sbjct: 73  LPFGDKSTLIDIKDFRFTINNNPCNGTHLLLLMLVHSAPENFVKRNVVRETWGQQSSNVA 132

Query: 114 VYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
           + FF+G +D   QT L+ E+  Y D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ 
Sbjct: 133 LLFFVGSSD-EYQTMLEEENRKYKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYIL 191

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHF 233
           KLDDDVF+++  + + LTR LSP G R L++C +      V R++RSKWRVS  EY    
Sbjct: 192 KLDDDVFVHIPAMLDFLTRDLSPWGARRLILCDL-HPTGTVKRSWRSKWRVSPQEYPGRH 250

Query: 234 YPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286
           YP +C G A+LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT    
Sbjct: 251 YPAYCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSL 302

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779723|ref|XP_001120247.2| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Apis mellifera]

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 111/233 (47%), Positives = 151/233 (64%), Gaps = 9/233 (3%)

Query: 60  LPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYDKRRLIRNTWG---TRVS 113
           LP  D + LI++ +F F IN  PC  T  + L+L+HSAP N+ KR ++R TWG   + V+
Sbjct: 73  LPFGDKSTLIDIKDFRFTINNDPCNGTHLLLLMLVHSAPENFVKRNVVRETWGQQSSNVA 132

Query: 114 VYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
           + FF+G +D   QT L+ E+  Y D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ 
Sbjct: 133 LLFFVGSSD-EYQTMLEEENRKYKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYIL 191

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHF 233
           KLDDDVF+++  + + LTR LSP G R L++C +      V R++RSKWRVS  EY    
Sbjct: 192 KLDDDVFVHIPAMLDFLTRDLSPWGARRLILCDL-HPTGTVKRSWRSKWRVSPQEYPGRH 250

Query: 234 YPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286
           YP +C G A+LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT    
Sbjct: 251 YPAYCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSL 302

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711970|ref|XP_003394538.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Bombus terrestris]

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 109/229 (47%), Positives = 150/229 (65%), Gaps = 9/229 (3%)

Query: 64  DSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYDKRRLIRNTWGTR---VSVYFF 117
           D + LI++ +F F IN  PC  T  + L+L+HSAP N+ KR ++R TWG +   V++ FF
Sbjct: 77  DKSTLIDIKDFRFTINNDPCNRTHPLLLMLVHSAPENFVKRNVVRETWGQQSPEVALLFF 136

Query: 118 IGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDD 177
           +G +D   QT L+ E+  + D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ KLDD
Sbjct: 137 VGSSD-EYQTMLEEENRKFKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYILKLDD 195

Query: 178 DVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPH 237
           DVF++V  + + LTR LSP G R L++C ++     V R++RSKWRVS  EY    YP +
Sbjct: 196 DVFVHVPAMLDFLTRDLSPWGARRLILCDLLPTGT-VKRSWRSKWRVSPQEYPGRHYPAY 254

Query: 238 CHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286
           C G A+LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT    
Sbjct: 255 CAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSL 302

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350402524|ref|XP_003486516.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Bombus impatiens]

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/229 (47%), Positives = 150/229 (65%), Gaps = 9/229 (3%)

Query: 64  DSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYDKRRLIRNTWGTR---VSVYFF 117
           D + LI++ +F F IN  PC  T  + L+L+HSAP N+ KR ++R TWG +   V++ FF
Sbjct: 77  DKSTLIDIKDFRFTINNDPCNRTHPLLLMLVHSAPENFVKRNVVRETWGQQSPEVALLFF 136

Query: 118 IGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDD 177
           +G +D   QT L+ E+  + D++QG F D+YRN+TYKH M  KW  Y+CP  KY+ KLDD
Sbjct: 137 VGSSD-EYQTMLEEENRKFKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYILKLDD 195

Query: 178 DVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPH 237
           DVF+++  + + LTR LSP G R L++C ++     V R++RSKWRVS  EY    YP +
Sbjct: 196 DVFVHIPAMLDFLTRDLSPWGARRLILCDLLPTGT-VKRSWRSKWRVSPREYPGRHYPAY 254

Query: 238 CHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286
           C G A+LYSPD VF LY+  Q  + YFW+DDV ITG +  K+NLT    
Sbjct: 255 CAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNLTQTSL 302

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328712545|ref|XP_003244837.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Acyrthosiphon pisum]

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/243 (46%), Positives = 150/243 (61%), Gaps = 8/243 (3%)

Query: 60  LPPDDSTRLINLTNFEFLINPPCLDT---VYLVLIHSAPYNYDKRRLIRNTWGTRVSVYF 116
           L   D   LI+L +F F IN    +    + + L+H+AP +Y KR+ IR+TW   +   F
Sbjct: 60  LADTDLHSLIDLPSFNFNINQKVCNNNTKLIMALVHTAPGHYAKRQAIRDTWAKMIPTLF 119

Query: 117 FIGETDPSNQTRLDI--ESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFK 174
           F+G  D SN T+ D+  E++ Y DIVQG F D YRNLTYKH MV KW +Y CP  +Y+ K
Sbjct: 120 FMGLPD-SNITQSDVVLENKIYSDIVQGDFIDCYRNLTYKHVMVLKWTLYYCPCARYLLK 178

Query: 175 LDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFY 234
            DDD  +N   L E+L   LSP G RNLLMC +++  + V R+YRSKWRVS+SEY + +Y
Sbjct: 179 TDDDTLVNAPYLLEILNHRLSPLGARNLLMCQLMFSSM-VKRSYRSKWRVSYSEYPNRWY 237

Query: 235 PPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE 294
           P +C G A++YSPDV++KLY   Q    YFW+DDV ITG +  K N+T          + 
Sbjct: 238 PIYCRGWAIMYSPDVIYKLYTEAQV-SPYFWIDDVHITGTIADKQNITQTDLGTLAVDES 296

Query: 295 PVV 297
            VV
Sbjct: 297 DVV 299

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079971|ref|XP_969899.1| PREDICTED: similar to AGAP006142-PA [Tribolium castaneum] gi|270004606|gb|EFA01054.1| hypothetical protein TcasGA2_TC003970 [Tribolium castaneum]

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/283 (39%), Positives = 165/283 (58%), Gaps = 19/283 (6%)

Query: 9   LIVVGIFLCLCLLIDFLSIPPDSPNQEDQFALLLSQGLTSSDSTWQSSSDLLPPDDSTRL 68
           +I V IF  LC+          +  +  Q        L +  S++      LP DD  +L
Sbjct: 10  VICVLIFFVLCI----------TSTESRQVTKKTVYNLYTKPSSYSYPVQTLPRDDYHQL 59

Query: 69  INLTNFEF-LINPPCLDT--VYLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGETD 122
            NL NF F ++N PC  T  + LVL+HS P +++ R+++R TWG    +V V F +G   
Sbjct: 60  NNLKNFTFTILNKPCNGTNPILLVLVHSNPTHFENRKVLRTTWGKNSLQVKVLFMLGLVK 119

Query: 123 PSN-QTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFM 181
               + +++ E+E + D+VQG F D+YRNLTYKH MV K+ +Y+CP  KY+ K DDD+F+
Sbjct: 120 NHRLKVQIEKENEEFGDLVQGSFLDTYRNLTYKHVMVLKYAIYHCPQAKYILKTDDDIFV 179

Query: 182 NVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGN 241
           N+  +   LT+ LSP G   ++ C ++ +KL V R  RSKW V+F EY   +YP +C G 
Sbjct: 180 NMPLMLNFLTKDLSPFGGARMIFCSVL-KKLSVSRNGRSKWSVTFQEYSGKWYPNYCQGW 238

Query: 242 ALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHA 284
            +LYSPDVVF LY+  Q    +FW+DD  ITG +  K++LTH 
Sbjct: 239 GILYSPDVVFDLYREAQ-KTNFFWIDDALITGTLAEKIHLTHV 280

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859071|ref|XP_003705021.1| PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5-like [Megachile rotundata]

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 108/233 (46%), Positives = 152/233 (65%), Gaps = 9/233 (3%)

Query: 60  LPPDDSTRLINLTNFEFLIN-PPCLDT--VYLVLIHSAPYNYDKRRLIRNTWGTR---VS 113
           LP  D + LI++ +F+F IN  PC  T  + L+L+HSAP N+ KR ++R TWG +   V+
Sbjct: 74  LPFGDRSTLIDIKDFKFTINHDPCNRTHPLLLMLVHSAPENFVKRNVVRETWGQQSPDVT 133

Query: 114 VYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
           + F +G +D   QT+L+ E+  + D++QG F D+YRN+TYKH M  KW  Y+CP  KYV 
Sbjct: 134 LLFLVGWSD-EYQTKLEEENRRFKDLIQGNFLDAYRNMTYKHVMALKWATYHCPSAKYVL 192

Query: 174 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHF 233
           KLDDDVF+++  + + LT  LSP G R L++C ++     V R++RSKWRVS  EY    
Sbjct: 193 KLDDDVFVHIPAMMDFLTHGLSPWGARRLILCDLLSAGT-VKRSWRSKWRVSPQEYPGRH 251

Query: 234 YPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286
           YP +C G A+LYSPD VF LY+  Q  + YFW+DDV ITG +  K+N+T    
Sbjct: 252 YPAYCAGWAILYSPDSVFLLYREAQ-KEPYFWIDDVHITGTLARKVNITQTSL 303

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
FB|FBgn0035558	434	CG11357 [Drosophila melanogast	0.540	0.474	0.437	5.7e-43
UNIPROTKB|E1C4T5	326	B3GALT1 "Uncharacterized prote	0.569	0.665	0.344	1.3e-27
UNIPROTKB|F1PGN6	326	B3GALT1 "Uncharacterized prote	0.569	0.665	0.344	1.7e-27
UNIPROTKB|F1N0D5	326	B3GALT1 "Uncharacterized prote	0.569	0.665	0.344	2.2e-27
UNIPROTKB|Q9Y5Z6	326	B3GALT1 "Beta-1,3-galactosyltr	0.569	0.665	0.344	2.2e-27
UNIPROTKB|F1S1X0	326	B3GALT1 "Uncharacterized prote	0.569	0.665	0.344	2.2e-27
MGI|MGI:1349403	326	B3galt1 "UDP-Gal:betaGlcNAc be	0.569	0.665	0.344	2.2e-27
RGD|1311898	326	B3galt1 "UDP-Gal:betaGlcNAc be	0.569	0.665	0.344	2.2e-27
ZFIN|ZDB-GENE-120215-203	328	si:dkey-276l13.6 "si:dkey-276l	0.548	0.637	0.356	5.7e-27
RGD|70955	377	B3gnt5 "UDP-GlcNAc:betaGal bet	0.590	0.596	0.323	1.5e-26

FB|FBgn0035558 CG11357 [Drosophila melanogaster (taxid:7227)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 98/224 (43%), Positives = 135/224 (60%)

Query:    68 LINLTNFEFLINPP-C-LDTVYLVLIHSAPYNYDKRRLIRNTWGTR-------VSVYFFI 118
             L++L NF +LI+ P C  D   L+L+HSA  N +KRR+IR TW  R       + VYF +
Sbjct:   115 LMDLPNFVYLIDQPACDKDVRALILVHSAVRNIEKRRIIRETWANRSYIDQTPLKVYFLV 174

Query:   119 GETDPSN---QTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKL 175
             G     +   Q  L  E+  + D++QG F D+YRN+TYKH M  KW    C H + + K+
Sbjct:   175 GGVSAKSEKWQQFLGRENHLHGDLIQGNFKDAYRNMTYKHVMALKWFNEKCAHAQLLVKV 234

Query:   176 DDDVFMNVIQLDELLTRTLSPHGTR----NLLMCPIVWEKLPVLRTYRSKWRVSFSEYRD 231
             DDDVFMN  QL + L     P  +     NL++C  V     V R+YRSKWRV++ EY +
Sbjct:   235 DDDVFMNTPQLVKYLATPSLPEYSMLRDPNLMLCRSVHHSR-VKRSYRSKWRVTYKEYPN 293

Query:   232 HFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIV 275
              FYP +C G A++Y+P+VV +LY+  Q  + YFWVDDV ITGI+
Sbjct:   294 RFYPEYCPGMAIVYAPEVVRRLYEAAQKSK-YFWVDDVLITGIL 336

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 83/241 (34%), Positives = 124/241 (51%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWGT-------RVSV 114
             TR IN  +F+FLIN P  C  +V +LV++ S  +  +D R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFDFLINEPNKCEKSVPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:   115 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATYCSKAKYVM 174

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+ + L P+   R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPNTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 288
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   289 W 289
             W
Sbjct:   288 W 288

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

UNIPROTKB|F1PGN6 B3GALT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 83/241 (34%), Positives = 123/241 (51%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWGT-------RVSV 114
             TR IN  +FEFLIN P  C  ++ +LV++ S  +  +D R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKSIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:   115 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 288
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   289 W 289
             W
Sbjct:   288 W 288

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|F1N0D5 B3GALT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 83/241 (34%), Positives = 122/241 (50%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWGT-------RVSV 114
             TR IN  +FEFLIN P  C   + +LV++ S  +  +D R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPTKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:   115 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCAKAKYVM 174

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 288
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   289 W 289
             W
Sbjct:   288 W 288

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|Q9Y5Z6 B3GALT1 "Beta-1,3-galactosyltransferase 1" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 83/241 (34%), Positives = 122/241 (50%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWGT-------RVSV 114
             TR IN  +FEFLIN P  C   + +LV++ S  +  +D R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:   115 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 288
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   289 W 289
             W
Sbjct:   288 W 288

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IDA

GO:0016021 "integral to membrane" evidence=NAS

GO:0006486 "protein glycosylation" evidence=IEA;IDA

GO:0030259 "lipid glycosylation" evidence=NAS

UNIPROTKB|F1S1X0 B3GALT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 83/241 (34%), Positives = 122/241 (50%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWGT-------RVSV 114
             TR IN  +FEFLIN P  C   + +LV++ S  +  +D R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:   115 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 288
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   289 W 289
             W
Sbjct:   288 W 288

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

MGI|MGI:1349403 B3galt1 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1" [Mus musculus (taxid:10090)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 83/241 (34%), Positives = 122/241 (50%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWGT-------RVSV 114
             TR IN  +FEFLIN P  C   + +LV++ S  +  +D R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:   115 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 288
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   289 W 289
             W
Sbjct:   288 W 288

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006486 "protein glycosylation" evidence=ISO

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=ISO;IDA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

RGD|1311898 B3galt1 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1" [Rattus norvegicus (taxid:10116)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 83/241 (34%), Positives = 122/241 (50%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWGT-------RVSV 114
             TR IN  +FEFLIN P  C   + +LV++ S  +  +D R+ IR TWG        +++ 
Sbjct:    55 TRPINPHSFEFLINEPNKCEKNIPFLVILISTTHKEFDARQAIRETWGDENNFKGIKIAT 114

Query:   115 YFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G+  DP     ++ ES+ +HDI+   F DSY NLT K  M  +WV   C   KYV 
Sbjct:   115 LFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVM 174

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+ + L P    R       V    P+ R  RSKW +    Y D 
Sbjct:   175 KTDSDIFVN---MDNLIYKLLKPSTKPRRRYFTGYVINGGPI-RDVRSKWYMPRDLYPDS 230

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL---THAKFSW 288
              YPP C G   ++S DV   +Y+  L T      ++DV++ G+   KL +    ++ F+ 
Sbjct:   231 NYPPFCSGTGYIFSADVAELIYKTSLHT--RLLHLEDVYV-GLCLRKLGIHPFQNSGFNH 287

Query:   289 W 289
             W
Sbjct:   288 W 288

GO:0000139 "Golgi membrane" evidence=IEA;ISO

GO:0006486 "protein glycosylation" evidence=IEA;ISO

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA;ISO

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-120215-203 si:dkey-276l13.6 "si:dkey-276l13.6" [Danio rerio (taxid:7955)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 82/230 (35%), Positives = 116/230 (50%)

Query:    66 TRLINLTNFEFLINPP--CLDTV-YLVLIHSAPYN-YDKRRLIRNTWG-------TRVSV 114
             TR +N  NF+FLIN P  C  T  +LVL+ S  +  +D R+ IR TWG         +  
Sbjct:    57 TRTLNPHNFKFLINEPKKCESTTPFLVLLISTNHKEFDARQAIRETWGDENTFSNVHILT 116

Query:   115 YFFIG-ETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF 173
              F +G  T+P     ++ ES+ +HDI+   F DSY NLT K  M  +WV   CP+ +YV 
Sbjct:   117 LFLLGYSTEPVLNQMVEQESQIFHDILVEDFVDSYHNLTLKTLMGMRWVSLFCPNAQYVM 176

Query:   174 KLDDDVFMNVIQLDELLTRTLSPHGT-RNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDH 232
             K D D+F+N   +D L+   L P+   R       V    P+ R   SKW +    Y D 
Sbjct:   177 KTDSDIFVN---MDNLVFNLLRPNAKPRRRFFTGHVINGGPI-RDVHSKWFMPRELYPDS 232

Query:   233 FYPPHCHGNALLYSPDVVFKLYQ-HLQTDQEYFWVDDVFITGIVFSKLNL 281
              YPP C G   +YS D+   LY+  L T      ++DV++ G+   KL +
Sbjct:   233 RYPPFCSGTGYVYSGDMAELLYKTSLHT--RLLHLEDVYV-GLCLRKLGI 279

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

RGD|70955 B3gnt5 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5" [Rattus norvegicus (taxid:10116)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 79/244 (32%), Positives = 121/244 (49%)

Query:    84 DTVYLVLIHSAPYNYDKRRLIRNTWGTR----------VSVYFFIGETDPSN----QTRL 129
             D + L+ I +AP NY++R  IR TWG            + + F +G   P      Q RL
Sbjct:    86 DVLLLLFIKTAPENYERRSAIRKTWGNENYVQSQLNANIKILFALGTPHPLKGKELQKRL 145

Query:   130 DIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL 189
               E + YHDI+Q  F DS+ NLT+K  + F W    CPH +++   DDD+F+++  L E 
Sbjct:   146 IWEDQVYHDIIQQDFTDSFHNLTFKFLLQFGWANTFCPHARFLMTADDDIFIHMPNLIEY 205

Query:   190 LTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDV 249
             L + L   G R+  +   V    P +R   SK+ V +  Y+   YP +  G A + S DV
Sbjct:   206 L-QGLEQVGVRDFWIGH-VHRGGPPVRDKSSKYYVPYEMYKWPAYPDYTAGAAYVVSNDV 263

Query:   250 VFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE-PV-VILYSKMDLQH 307
               K+Y+  QT     ++DDVF+ G+  +K+ +      ++ G  + P    +Y KM   H
Sbjct:   264 AAKIYEASQTLNSSMYIDDVFM-GLCANKVGVVPQDHVFFSGEGKIPYHPCIYEKMITSH 322

Query:   308 NLSQ 311
               SQ
Sbjct:   323 GHSQ 326

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005622 "intracellular" evidence=ISO

GO:0006486 "protein glycosylation" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA;ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0008457 "beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity" evidence=IEA;ISO

GO:0008917 "lipopolysaccharide N-acetylglucosaminyltransferase activity" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0047256 "lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9BYG0	B3GN5_HUMAN	2, ., 4, ., 1, ., 2, 0, 6	0.3137	0.6089	0.6137	yes	N/A
Q864U8	B3GN5_PIG	2, ., 4, ., 1, ., 2, 0, 6	0.3242	0.6089	0.6153	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	381
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	3e-33
PLN03133	636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	2e-12

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  122 bits (308), Expect = 3e-33
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 19/198 (9%)

Query: 99  DKRRLIRNTWG-------TRVSVYFFIGETDPSNQTRLDI---ESETYHDIVQGRFWDSY 148
            +R  IR TW         R+   F +G +  ++    D+   E++ Y DIV   F D+Y
Sbjct: 1   ARRNAIRKTWMNKGNSEGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVDFEDTY 60

Query: 149 RNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIV 208
            NLT+K      + V   P  KY+ K+DDDV+    +L  LL R               V
Sbjct: 61  ENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNINP--SESSFYGYV 118

Query: 209 WEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLY---QHLQTDQEYFW 265
            ++ PV+R  +SKW V  S+Y    YPP+  G   L S D    L    +H +    +  
Sbjct: 119 MKEGPVIRNKKSKWYVPPSDYPCSRYPPYASGPFYLLSRDAAELLLKASKHRR----FLQ 174

Query: 266 VDDVFITGIVFSKLNLTH 283
           ++DV++TGI+   L ++ 
Sbjct: 175 IEDVYVTGILADDLGISR 192

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional

 Score = 68.3 bits (167), Expect = 2e-12
 Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 22/214 (10%)

Query: 56  SSDLLPPDDSTRLINLTNFEFLINPPC--LDTVYLVL-IHSAPYNYDKRRLIRNTW---- 108
           +S L   +DS  +I+L   E L +PP      + L + + S   N+ +R  +R TW    
Sbjct: 356 ASGLPTSEDSEHVIDL---EALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYD 412

Query: 109 ---GTRVSVYFFIG-ETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVY 164
                 V+V FF+G   +      L  E+ TY DI    F D Y  +T+K T+       
Sbjct: 413 AVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWK-TLAICIFGT 471

Query: 165 NCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRV 224
                KYV K DDD F+ V ++   L RT   HG   LL   I  +  P      SKW +
Sbjct: 472 EVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHG---LLYGLINSDSQPHRNPD-SKWYI 527

Query: 225 SFSEYRDHFYPPHCHGNALLYSPDV---VFKLYQ 255
           S  E+ +  YPP  HG   + S D+   V+K ++
Sbjct: 528 SPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRHK 561

Length = 636

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	381
KOG2287|consensus	349		100.0
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	100.0
KOG2288|consensus	274		100.0
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.81
KOG2246|consensus	364		99.69
PLN03153	537	hypothetical protein; Provisional	99.34
KOG3708|consensus	681		96.62
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	96.28
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	95.87
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	94.76
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	94.3
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	94.29
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	94.28
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	94.2
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	93.91
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	93.79
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	93.25
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	92.21
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	92.17
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	92.06
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	91.55
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	90.8
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	90.74
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	90.72
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	90.69
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	90.6
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	89.85
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	89.59
PRK11204	420	N-glycosyltransferase; Provisional	89.28
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	87.55
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	87.27
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	87.03
COG1216	305	Predicted glycosyltransferases [General function p	84.87
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	83.11
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	81.65
PRK14583	444	hmsR N-glycosyltransferase; Provisional	80.69
COG1215	439	Glycosyltransferases, probably involved in cell wa	80.28

>KOG2287|consensus

Probab=100.00  E-value=2.9e-55  Score=436.81  Aligned_cols=247  Identities=31%  Similarity=0.492  Sum_probs=218.0

Q ss_pred             cCCCCcccee-c-CCCCCC---cEEEEEECCCCCHHHHHHHHHHhcc-------CceEEEEecCCC-h-hhHHHHHHHHh
Q psy14358         69 INLTNFEFLI-N-PPCLDT---VYLVLIHSAPYNYDKRRLIRNTWGT-------RVSVYFFIGETD-P-SNQTRLDIESE  134 (381)
Q Consensus        69 ~~~~~f~~li-~-~~C~~~---~Lli~V~S~p~~~~rR~aIR~TWg~-------~v~~~FvlG~~~-~-~~~~~L~~E~~  134 (381)
                      .++..+.+++ . +.|...   +++++|+|+++|++||++||+|||+       .++++|++|.+. + ++++.|++|++
T Consensus        74 ~~~~~~~~~l~~p~~~~~~~~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~  153 (349)
T KOG2287|consen   74 ADFQKFFYLLYLPEICDPDRPPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEAR  153 (349)
T ss_pred             hhhccChhhhcCChhhcCCCCceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHH
Confidence            3555555555 4 455543   7999999999999999999999999       589999999993 3 45899999999


Q ss_pred             hCCCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcc
Q psy14358        135 TYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPV  214 (381)
Q Consensus       135 ~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~  214 (381)
                      .||||||+||.|+|.|||+||+++++|+.++||+|+||+|+|||+|+|+++|+++|.....  +.+.+++|.+ ..+.+|
T Consensus       154 ~ygDIi~~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~--~~~~~~~G~v-~~~~~p  230 (349)
T KOG2287|consen  154 LYGDIIQVDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLND--PSSDLYYGRV-IQNAPP  230 (349)
T ss_pred             HhCCEEEEecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCC--CCcceEEEee-cccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999842  4789999999 778999


Q ss_pred             eeccCCccccccccccCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecCCCCCCCC
Q psy14358        215 LRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE  294 (381)
Q Consensus       215 ~R~~~sKwyv~~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~~f~~~~~  294 (381)
                      +|++.+|||||+++||++.||+||+|+||++|+++|++|++++.+ .+++++|||++||++++.+||++.+++++.....
T Consensus       231 ~R~~~~KwyVp~~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~-~~~~~iEDV~~g~~l~~~~gi~~~~~~~~~~~~~  309 (349)
T KOG2287|consen  231 IRDKTSKWYVPESEYPCSVYPPYASGPGYVISGDAARRLLKASKH-LKFFPIEDVFVGGCLAEDLGIKPVNHPGFFEIPL  309 (349)
T ss_pred             CCCCCCCCccCHHHCCCCCCCCcCCCceeEecHHHHHHHHHHhcC-CCccchHHHHHHHHHHHhcCCCcccCcccccccc
Confidence            999999999999999999999999999999999999999999999 9999999999955555555999999998655554


Q ss_pred             Ce-eeecCceeEEeccCHHHHHHccc
Q psy14358        295 PV-VILYSKMDLQHNLSQYILAKLNL  319 (381)
Q Consensus       295 ~~-~~~~~~~i~~H~~spy~m~~~~~  319 (381)
                      .+ .||+.++++.|..+|.+|..++.
T Consensus       310 ~~~~~~~~~~~~~H~~~p~e~~~~w~  335 (349)
T KOG2287|consen  310 SFDPCCYRDLLAVHRLSPNEMIYLWK  335 (349)
T ss_pred             cCCCCcccceEEEecCCHHHHHHHHH
Confidence            44 58999999999999976555443

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=1e-51  Score=431.92  Aligned_cols=232  Identities=27%  Similarity=0.331  Sum_probs=202.6

Q ss_pred             ecCCCCCC---cEEEEEECCCCCHHHHHHHHHHhcc-------CceEEEEecCC-ChhhHHHHHHHHhhCCCEEEecccC
Q psy14358         78 INPPCLDT---VYLVLIHSAPYNYDKRRLIRNTWGT-------RVSVYFFIGET-DPSNQTRLDIESETYHDIVQGRFWD  146 (381)
Q Consensus        78 i~~~C~~~---~Lli~V~S~p~~~~rR~aIR~TWg~-------~v~~~FvlG~~-~~~~~~~L~~E~~~~~DII~~df~D  146 (381)
                      ..++|+..   +|+|+|+|+|+|++||+|||+|||+       .++++|++|.+ +..+++.|++|+++||||||+||.|
T Consensus       375 kAppL~~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~dF~D  454 (636)
T PLN03133        375 KSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVD  454 (636)
T ss_pred             cCCCCCCCCceEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEEeeec
Confidence            35567643   8999999999999999999999998       47899999999 7788999999999999999999999


Q ss_pred             CCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCcccccc
Q psy14358        147 SYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSF  226 (381)
Q Consensus       147 sY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~  226 (381)
                      +|+|||+||++++.|+. +|++++|+||+|||+|||+++|+++|+....   .+++|+|.+ ..+..|+|++.+|||||.
T Consensus       455 sY~NLTlKtl~~~~wa~-~c~~akFilK~DDDvFVnv~~Ll~~L~~~~~---~~~Ly~G~v-~~~~~PiRd~~sKWYVs~  529 (636)
T PLN03133        455 YYSLITWKTLAICIFGT-EVVSAKYVMKTDDDAFVRVDEVLASLKRTNV---SHGLLYGLI-NSDSQPHRNPDSKWYISP  529 (636)
T ss_pred             hhhhhHHHHHHHHHHHH-hCCCceEEEEcCCceEEcHHHHHHHHHhcCC---CCceEEEEe-ccCCCcccCCCCCCCCCH
Confidence            99999999999999985 6889999999999999999999999986542   567999998 778899999999999999


Q ss_pred             ccccCCCCCCccccceEeeCHHHHHHHHHHhc--cCCCCCCccchhhHHhhHH---hCCCceeecCCCCCCCCCeeeecC
Q psy14358        227 SEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQ--TDQEYFWVDDVFITGIVFS---KLNLTHAKFSWWPGHDEPVVILYS  301 (381)
Q Consensus       227 ~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~--~~~~~~~~EDV~vTGi~l~---~~gi~~~~~~~f~~~~~~~~~~~~  301 (381)
                      ++||++.|||||+|+|||||+|+|+.|+.++.  . ++.|++|||+| |+|++   ++|+.+.+...+....   ..|..
T Consensus       530 ~eyp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~-l~~f~lEDVyv-Gi~l~~l~k~gl~v~~~~~~r~~~---~~C~~  604 (636)
T PLN03133        530 EEWPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGR-LKMFKLEDVAM-GIWIAEMKKEGLEVKYENDGRIYN---EGCKD  604 (636)
T ss_pred             HHCCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcc-cCcCChhhHhH-HHHHHHhcccCCCceeeCCCcccC---CcCCC
Confidence            99999999999999999999999999998863  5 89999999999 99975   4677776554332221   23557


Q ss_pred             ceeEEeccCHHHHHHccc
Q psy14358        302 KMDLQHNLSQYILAKLNL  319 (381)
Q Consensus       302 ~~i~~H~~spy~m~~~~~  319 (381)
                      ++++.|+++|.+|..++.
T Consensus       605 ~~i~~H~~sP~eM~~lW~  622 (636)
T PLN03133        605 GYVVAHYQSPREMLCLWQ  622 (636)
T ss_pred             CeEEEecCCHHHHHHHHH
Confidence            788999999998877655

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=3.2e-49  Score=362.48  Aligned_cols=185  Identities=42%  Similarity=0.713  Sum_probs=172.8

Q ss_pred             HHHHHHHHHhcc-------CceEEEEecCC---ChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCC
Q psy14358         99 DKRRLIRNTWGT-------RVSVYFFIGET---DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPH  168 (381)
Q Consensus        99 ~rR~aIR~TWg~-------~v~~~FvlG~~---~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~  168 (381)
                      +||++||+||++       .++++|++|.+   +..+++.|.+|+++|+||||+||.|+|.|||+|++++++|+.++||+
T Consensus         1 ~rR~~IR~TW~~~~~~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~   80 (195)
T PF01762_consen    1 ERRQAIRETWGNQRNFKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWASKHCPN   80 (195)
T ss_pred             ChHHHHHHHHhcccccCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHHhhCCc
Confidence            589999999998       78999999999   45678889999999999999999999999999999999999999999


Q ss_pred             ccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCCccccceEeeCHH
Q psy14358        169 VKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPD  248 (381)
Q Consensus       169 a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y~~G~gYvLS~d  248 (381)
                      ++|++|+|||+|||+++|.++|...... ..++.++|.. ..+.+|.|++.+|||+|.++||.+.||+||+|+||+||++
T Consensus        81 ~~~v~k~DDD~~vn~~~l~~~L~~~~~~-~~~~~~~g~~-~~~~~~~r~~~~kw~v~~~~y~~~~yP~y~~G~~yvls~~  158 (195)
T PF01762_consen   81 AKYVLKVDDDVFVNPDRLVSFLKSLKQD-PSKNSIYGGC-IKNGPPIRDPSSKWYVSEEEYPDDYYPPYCSGGGYVLSSD  158 (195)
T ss_pred             hhheeecCcEEEEehHHhhhhhhhcccC-cccccccccc-ccCCccccccccCceeeeeecccccCCCcCCCCeEEecHH
Confidence            9999999999999999999999987221 3567888988 7778899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecC
Q psy14358        249 VVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       249 ~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      +|+.|++++.. ++.+++|||++ |+|++++||++.|++
T Consensus       159 ~v~~i~~~~~~-~~~~~~eDv~i-Gi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  159 VVKRIYKASSH-TPFFPLEDVFI-GILAEKLGIKPIHDP  195 (195)
T ss_pred             HHHHHHHHhhc-CCCCCchHHHH-HHHHHHCCCCccCCC
Confidence            99999999999 99999999999 999999999999864

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=9.4e-47  Score=375.48  Aligned_cols=198  Identities=19%  Similarity=0.225  Sum_probs=177.1

Q ss_pred             cEEEEEECCCCCHHHHHHHHHHhcc------------CceEEEEecCC---ChhhHHHHHHHHhhCCCEEEecccCCCCc
Q psy14358         86 VYLVLIHSAPYNYDKRRLIRNTWGT------------RVSVYFFIGET---DPSNQTRLDIESETYHDIVQGRFWDSYRN  150 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aIR~TWg~------------~v~~~FvlG~~---~~~~~~~L~~E~~~~~DII~~df~DsY~N  150 (381)
                      +++|+|+|+++|++||++||+|||+            .++++|++|++   +...+++|++|+++|||||++||.|+|.|
T Consensus       140 ~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~N  219 (408)
T PLN03193        140 LMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLE  219 (408)
T ss_pred             EEEEEEeCCCCCHHHHHHHHHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEeccccccc
Confidence            7889999999999999999999996            37899999998   35788999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccc-
Q psy14358        151 LTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEY-  229 (381)
Q Consensus       151 Lt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~y-  229 (381)
                      ||.||+++|+|+.++| +++|++|+|||+|||+++|+++|.....   .+++|+|++ ..  .|+|++.++||.+++.| 
T Consensus       220 LT~KTl~~f~wA~~~~-dAkF~mK~DDDvfVnv~~L~~~L~~~~~---~~rlYiG~m-~~--gPvr~~~~~ky~epe~w~  292 (408)
T PLN03193        220 LSAKTKTYFATAVAMW-DADFYVKVDDDVHVNIATLGETLVRHRK---KPRVYIGCM-KS--GPVLSQKGVRYHEPEYWK  292 (408)
T ss_pred             chHHHHHHHHHHHHcC-CCeEEEEcCCCceEcHHHHHHHHHhcCC---CCCEEEEec-cc--CccccCCCCcCcCccccc
Confidence            9999999999999988 8999999999999999999999986532   456999987 43  36677666666665665 


Q ss_pred             ---cCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecCCCCCC
Q psy14358        230 ---RDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGH  292 (381)
Q Consensus       230 ---p~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~~f~~~  292 (381)
                         |++.|||||+|+|||||+|+|+.|+.+... .+.+++|||+| |+|+..++|+++|.++|-..
T Consensus       293 ~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~-L~~y~~EDV~v-G~Wl~~L~V~~vdd~~fcc~  356 (408)
T PLN03193        293 FGENGNKYFRHATGQLYAISKDLASYISINQHV-LHKYANEDVSL-GSWFIGLDVEHIDDRRLCCG  356 (408)
T ss_pred             ccCccccCCCCCCcceEEehHHHHHHHHhChhh-hcccCcchhhh-hhHhccCCceeeecccccCC
Confidence               679999999999999999999999988888 88899999999 99999999999999988654

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=100.00  E-value=1.7e-40  Score=326.51  Aligned_cols=239  Identities=15%  Similarity=0.161  Sum_probs=194.5

Q ss_pred             CCccceec---CCCCCC--cEEEEEECCCCC--HHHHHHHHHHhcc-------------CceEEEEecCC---ChhhHHH
Q psy14358         72 TNFEFLIN---PPCLDT--VYLVLIHSAPYN--YDKRRLIRNTWGT-------------RVSVYFFIGET---DPSNQTR  128 (381)
Q Consensus        72 ~~f~~li~---~~C~~~--~Lli~V~S~p~~--~~rR~aIR~TWg~-------------~v~~~FvlG~~---~~~~~~~  128 (381)
                      ....|+.+   ..++..  .++++|+|..++  +.||+++|+||.+             .+.++|++|.+   +.+.+++
T Consensus        62 ~~l~~~~~~~~~~w~~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~  141 (382)
T PTZ00210         62 EYLMFVPSNVAAVWKAQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHS  141 (382)
T ss_pred             hhhhccCHHHHHHhccCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHH
Confidence            44456662   356665  456899999987  8999999999877             56789999999   4589999


Q ss_pred             HHHHHhhCCCEEEecc------------------cCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHH
Q psy14358        129 LDIESETYHDIVQGRF------------------WDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  190 (381)
Q Consensus       129 L~~E~~~~~DII~~df------------------~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L  190 (381)
                      |++|+++|||||++||                  .|++.|||+||+++++|+.+.||+++||+|+|||+|||+++++++|
T Consensus       142 L~eEA~~~~DIVilpf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~L  221 (382)
T PTZ00210        142 LKEEAARTHDIITLPTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADL  221 (382)
T ss_pred             HHHHHHHhCCEEEEecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHH
Confidence            9999999999999999                  6777899999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCCccccceEeeCHHHHHHHHHHhcc-CC--------
Q psy14358        191 TRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQT-DQ--------  261 (381)
Q Consensus       191 ~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~-~~--------  261 (381)
                      +..    +++++|+|.+ .....|.|+               .+||||+|+||+||+|+|+.|++.... ..        
T Consensus       222 r~~----prr~LY~G~v-~~~~~p~Rd---------------~~PpY~~G~gYvLSrDVA~~Lvs~~pl~rL~~~pys~~  281 (382)
T PTZ00210        222 RVM----PRHGLYMGRY-NYYNRIWRR---------------NQLTYVNGYCITLSRDTAQAIISYKPLERLVNMPFSMW  281 (382)
T ss_pred             hhC----CCCceEEEee-CCCCccccC---------------CCCCccccceeeccHHHHHHHHhhChHhHhhcCCCchH
Confidence            766    3667999998 666566665               259999999999999999999998532 01        


Q ss_pred             -------CCCCccchhhHHhhH-HhCCCceeec-----CCCCCCCCCe--eeecCceeEEeccCH--H--HHHHcccc--
Q psy14358        262 -------EYFWVDDVFITGIVF-SKLNLTHAKF-----SWWPGHDEPV--VILYSKMDLQHNLSQ--Y--ILAKLNLT--  320 (381)
Q Consensus       262 -------~~~~~EDV~vTGi~l-~~~gi~~~~~-----~~f~~~~~~~--~~~~~~~i~~H~~sp--y--~m~~~~~~--  320 (381)
                             -.+..||+++ |.++ .+++.++.-.     -+|+....+.  .....+++++|+++|  |  +|++|++.  
T Consensus       282 ~~~~y~~~~~~~EDiMv-G~vLr~~~k~~~l~~V~~~~c~Fhd~~~~~~~~~v~~~sVvvHhike~dYa~Lm~~F~n~~~  360 (382)
T PTZ00210        282 DYFDFLDLGMFYEDVMV-GMILREKVVYRNLISVEMGRCHFHNAGKFGVRKSVRNMSVVIHHIQEADYEMLMDYFPEGVI  360 (382)
T ss_pred             HHHHHHHhhcCchHHHH-HHHHHHhcCcCceeeeccccccceecCCCCCccccccceEEEEecCHHHHHHHHHHhcCCCC
Confidence                   2478999999 9988 5555555422     2777654322  356778999999999  3  99999994  


Q ss_pred             --ccccccccCCC
Q psy14358        321 --HAKFSWWPGHD  331 (381)
Q Consensus       321 --~~~~~~w~~~~  331 (381)
                        +....+|.++|
T Consensus       361 ~~~P~~~~~~~~~  373 (382)
T PTZ00210        361 PPAPSKVMWLNSN  373 (382)
T ss_pred             CCCCcceEEecCC
Confidence              33778898888

>KOG2288|consensus

Probab=100.00  E-value=1.8e-34  Score=269.39  Aligned_cols=194  Identities=24%  Similarity=0.344  Sum_probs=177.1

Q ss_pred             cEEEEEECCCCCHHHHHHHHHHhcc------------CceEEEEecCC--ChhhHHHHHHHHhhCCCEEEec-ccCCCCc
Q psy14358         86 VYLVLIHSAPYNYDKRRLIRNTWGT------------RVSVYFFIGET--DPSNQTRLDIESETYHDIVQGR-FWDSYRN  150 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aIR~TWg~------------~v~~~FvlG~~--~~~~~~~L~~E~~~~~DII~~d-f~DsY~N  150 (381)
                      .++|+|.|++++.+||+.+|+||+.            .+..+|++|+.  +.....+|++|+++|+|.+.+| ..|+|.+
T Consensus        12 l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~~~~g~~~~r~ie~E~~~~~DfllLd~h~E~Y~~   91 (274)
T KOG2288|consen   12 LLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGTATLGASLDRALEEENAQHGDFLLLDRHEEAYEE   91 (274)
T ss_pred             EEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEeccCCccHHHHHHHHHHHHhcCCeEeechhHHHHHH
Confidence            7789999999999999999999998            67899999995  7888999999999999999999 9999999


Q ss_pred             hhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCcccccccccc
Q psy14358        151 LTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYR  230 (381)
Q Consensus       151 Lt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp  230 (381)
                      |+.||+.+|.++.+++ +++|++|+|||+|||+..|...|.....   .+++|+|++  .+.+++-.+++||+.|++-+.
T Consensus        92 Ls~Kt~~~f~~A~~~~-daeFyvKvDDDv~v~l~~L~~~la~~r~---~pr~YiGcm--ksg~v~~~~~~kw~EpeWkfg  165 (274)
T KOG2288|consen   92 LSAKTKAFFSAAVAHW-DAEFYVKVDDDVYVRLARLGTLLARERS---HPRLYIGCM--KSGPVLTQPGGKWYEPEWKFG  165 (274)
T ss_pred             HHHHHHHHHHHHHHhc-cceEEEEccccceecHHHHHHHHHhhcc---CCceEEEEe--cCCccccCCCCcccChhhhcC
Confidence            9999999999999999 9999999999999999999999988753   478999986  667777888999999995554


Q ss_pred             CC-CCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecC
Q psy14358        231 DH-FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       231 ~~-~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      .. .|-+|+.|++|+||+|+|..|..+.+. ...+..|||.+ |.|+--++|+++|.+
T Consensus       166 ~~g~YfrhA~G~~YvlS~dLa~yi~in~~l-L~~y~nEDVSl-GaW~~gldV~h~dd~  221 (274)
T KOG2288|consen  166 DNGNYFRHATGGGYVLSKDLATYISINRQL-LHKYANEDVSL-GAWMIGLDVEHVDDP  221 (274)
T ss_pred             cccccchhccCceEEeeHHHHHHHHHhHHH-HHhhccCCccc-ceeeeeeeeeEecCC
Confidence            32 299999999999999999999999988 88999999999 999988888888876

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.81  E-value=2.5e-19  Score=171.50  Aligned_cols=209  Identities=15%  Similarity=0.179  Sum_probs=110.5

Q ss_pred             cEEEEEECCCCCHH-HHHHHHHHhcc-CceEEEE-ecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHH
Q psy14358         86 VYLVLIHSAPYNYD-KRRLIRNTWGT-RVSVYFF-IGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV  162 (381)
Q Consensus        86 ~Lli~V~S~p~~~~-rR~aIR~TWg~-~v~~~Fv-lG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~  162 (381)
                      +++|+|+|++++.+ |-.+|++||++ .-..+|+ ....+..+..    +  .-.+++..+..+++...+++.++...+-
T Consensus         7 dI~i~V~T~~k~h~tR~~~I~~TW~~~~~~~~~ifsd~~d~~l~~----~--~~~~l~~~~~~~~~~~~~~~~~~~~~y~   80 (252)
T PF02434_consen    7 DIFIAVKTTKKFHKTRAPAIKQTWAKRCNKQTFIFSDAEDPSLPT----V--TGVHLVNPNCDAGHCRKTLSCKMAYEYD   80 (252)
T ss_dssp             GEEEEEE--GGGTTTTHHHHHHTGGGGSGGGEEEEESS--HHHHH----H--HGGGEEE-------------HHHHHHHH
T ss_pred             cEEEEEEeCHHHHHHHHHHHHHHHHhhcCCceEEecCcccccccc----c--cccccccCCCcchhhHHHHHHHHHHHHH
Confidence            78999999997665 45799999999 3334554 4433443322    2  3456777777766665566666666654


Q ss_pred             HHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCCcc-ccc
Q psy14358        163 VYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHC-HGN  241 (381)
Q Consensus       163 ~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y~-~G~  241 (381)
                      ...-++++|++++|||+||++++|+++|...++   .+++|+|.. ....+ ..... +.  ....-+...| .|+ +|+
T Consensus        81 ~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~---~~~~yiG~~-~~~~~-~~~~~-~~--~~~~~~~~~~-~f~~GGa  151 (252)
T PF02434_consen   81 HFLNSDKDWFCFADDDTYVNVENLRRLLSKYDP---SEPIYIGRP-SGDRP-IEIIH-RF--NPNKSKDSGF-WFATGGA  151 (252)
T ss_dssp             HHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-T---TS--EEE-E-E---------------------------EE-GGG
T ss_pred             hhhcCCceEEEEEeCCceecHHHHHHHHhhCCC---ccCEEeeee-ccCcc-ceeec-cc--cccccCcCce-EeeCCCe
Confidence            444468999999999999999999999999875   688999987 32211 11100 00  0000001122 454 789


Q ss_pred             eEeeCHHHHHHHHHHhcc-CCC-----CCCccchhhHHhhHHh-CCCceeecCCCCCCCCCe------eeecCceeEEec
Q psy14358        242 ALLYSPDVVFKLYQHLQT-DQE-----YFWVDDVFITGIVFSK-LNLTHAKFSWWPGHDEPV------VILYSKMDLQHN  308 (381)
Q Consensus       242 gYvLS~d~a~~l~~~~~~-~~~-----~~~~EDV~vTGi~l~~-~gi~~~~~~~f~~~~~~~------~~~~~~~i~~H~  308 (381)
                      ||+|||.+++++...... ...     .-..||+.| |.|++. +||+.++.+.||.+....      ....+-.+++|+
T Consensus       152 G~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~l-G~ci~~~lgv~lt~s~~fhs~~~~l~~~~~~~l~~q~~~s~~~  230 (252)
T PF02434_consen  152 GYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTL-GYCIENLLGVPLTHSPLFHSHLENLQDYNPETLHRQVPISYHK  230 (252)
T ss_dssp             -EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHH-HHHHHHTT---EEE-TT---SSS-GGG--TTTGGG-SEEE-EE
T ss_pred             eHHHhHHHHHHHhhhcccccccCCcCCCCCcccChh-hhhHHhcCCcceeechhhcccCcccccCCHHHhccCCCeecCC
Confidence            999999999999654432 011     234799999 999988 999999999999987552      123334677777


Q ss_pred             cC
Q psy14358        309 LS  310 (381)
Q Consensus       309 ~s  310 (381)
                      ..
T Consensus       231 ~~  232 (252)
T PF02434_consen  231 FE  232 (252)
T ss_dssp             ET
T ss_pred             Cc
Confidence            64

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246|consensus

Probab=99.69  E-value=9.1e-17  Score=160.92  Aligned_cols=165  Identities=18%  Similarity=0.235  Sum_probs=128.6

Q ss_pred             cEEEEEECCCCCHHHH-HHHHHHhcc-CceEEEEe---cCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHH
Q psy14358         86 VYLVLIHSAPYNYDKR-RLIRNTWGT-RVSVYFFI---GETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFK  160 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR-~aIR~TWg~-~v~~~Fvl---G~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lk  160 (381)
                      .+++.|.|.+.+...| ..+-+||++ +-+..|+-   ++.+..           +. .|..+..|+|+++..||..+++
T Consensus        92 ~v~cwv~t~~~~~~~~~~~v~~TW~~rc~~~~f~s~~~s~~~~~-----------f~-~v~~~~~~g~~~~~~ktr~~~~  159 (364)
T KOG2246|consen   92 RVLCWVLTSPMRHVTRADAVKETWLKRCDKGIFFSPTLSKDDSR-----------FP-TVYYNLPDGYRSLWRKTRIAFK  159 (364)
T ss_pred             eEEEEEEecCcCceeehhhhhcccccccCcceecCccCCCCCCc-----------Cc-eeeccCCcchHHHHHHHHHHHH
Confidence            8899999998766655 599999999 44555654   333221           11 2478899999999999999999


Q ss_pred             HHHHhC-CCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCCc-c
Q psy14358        161 WVVYNC-PHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPH-C  238 (381)
Q Consensus       161 w~~~~c-p~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y-~  238 (381)
                      ++.++. .+++|++|+|||||+.++||+.+|...++   .++.|+|.. ...           +.-      +.   | -
T Consensus       160 yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yDp---~~p~YiG~~-~~~-----------~~~------~~---y~~  215 (364)
T KOG2246|consen  160 YVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYDP---EKPVYLGYR-SKS-----------YFQ------NG---YSS  215 (364)
T ss_pred             HHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcCC---CCcEEeccc-ccc-----------ccc------cc---ccc
Confidence            998655 68999999999999999999999999985   788999986 210           000      11   3 2


Q ss_pred             ccceEeeCHHHHHHHHHHhcc---CCCCC---CccchhhHHhhHHhCCCceeecC
Q psy14358        239 HGNALLYSPDVVFKLYQHLQT---DQEYF---WVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       239 ~G~gYvLS~d~a~~l~~~~~~---~~~~~---~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      +|+||++|+.+.+.+++....   .++.-   ..||+.| |.|++.+||.+.+..
T Consensus       216 g~ag~~ls~aa~~~la~~l~~~~~~C~~~~~~~~eD~~i-~~Cl~~~GV~~~d~~  269 (364)
T KOG2246|consen  216 GGAGYVLSFAALRRLAERLLNNEDKCPQRYPSYGEDRRI-GRCLAEVGVPATDER  269 (364)
T ss_pred             CCCCcceeHHHHHHHHHHHhcchhhcccccCCchhHHHH-HHHHHHhCCCccCch
Confidence            799999999999998887644   13322   4899999 999999999998853

>PLN03153 hypothetical protein; Provisional

Probab=99.34  E-value=4.8e-11  Score=122.72  Aligned_cols=195  Identities=13%  Similarity=0.147  Sum_probs=124.9

Q ss_pred             cEEEEEECCCCCH-HHHHHHHHHhcc-Cce-EEEEecCCChhhHHHHHHHHhhCCCE--EEecccCC---CC---chhHH
Q psy14358         86 VYLVLIHSAPYNY-DKRRLIRNTWGT-RVS-VYFFIGETDPSNQTRLDIESETYHDI--VQGRFWDS---YR---NLTYK  154 (381)
Q Consensus        86 ~Lli~V~S~p~~~-~rR~aIR~TWg~-~v~-~~FvlG~~~~~~~~~L~~E~~~~~DI--I~~df~Ds---Y~---NLt~K  154 (381)
                      .++++|.++.+.. +|+..|+.+|+. .++ .+|+.......      .|   -.++  +.+.-..+   |.   +....
T Consensus       123 hIvF~I~~s~~~w~~R~~yik~wW~p~~~rg~v~ld~~~~~~------~~---~~~~P~i~is~d~s~f~y~~~~Gh~sa  193 (537)
T PLN03153        123 HIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQVSPE------EG---DDSLPPIMVSEDTSRFRYTNPTGHPSG  193 (537)
T ss_pred             cEEEEEEEchhhhhhhhhhhhhhcCcccceeEEEecccCCCC------CC---cCCCCCEEeCCCcccccccCCCCcHHH
Confidence            7888998887655 566899999998 444 44543332110      00   0111  11111111   22   22221


Q ss_pred             -HH--HHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccC
Q psy14358        155 -HT--MVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRD  231 (381)
Q Consensus       155 -tl--~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~  231 (381)
                       -+  +..+-+..+-|+++|++++|||||+.++||++.|...++   .++.|+|.. ......                .
T Consensus       194 ~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDp---tkp~YIGs~-Se~~~q----------------n  253 (537)
T PLN03153        194 LRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYDP---SEMVYVGGP-SESHSA----------------N  253 (537)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcCC---CCCEEeccc-cccccc----------------c
Confidence             11  334444455799999999999999999999999999875   788999986 211100                0


Q ss_pred             CCCC-Cc-cccceEeeCHHHHHHHHHHhccCC----CCCCccchhhHHhhHHhCCCceeecCCCCCCCC-----Ce-eee
Q psy14358        232 HFYP-PH-CHGNALLYSPDVVFKLYQHLQTDQ----EYFWVDDVFITGIVFSKLNLTHAKFSWWPGHDE-----PV-VIL  299 (381)
Q Consensus       232 ~~yP-~Y-~~G~gYvLS~d~a~~l~~~~~~~~----~~~~~EDV~vTGi~l~~~gi~~~~~~~f~~~~~-----~~-~~~  299 (381)
                      ..+. .| -+|+||+||+.++++|...-.. +    +...-+|..| |.|+..+||..++.++||...-     ++ ...
T Consensus       254 ~~f~~~fA~GGAG~~LSrPLae~L~~~~d~-C~~rY~~~~~gD~rL-~~CL~elGV~LT~~~gfhQ~D~~Gd~~G~les~  331 (537)
T PLN03153        254 SYFSHNMAFGGGGIAISYPLAEALSRILDD-CLDRYPKLYGSDDRL-HACITELGVPLSREPGFHQWDIRGNAHGLLSSH  331 (537)
T ss_pred             cccccccccCCceEEEcHHHHHHHHHHhhh-hhhhcccCCCcHHHH-HHHHHHcCCCceecCCccccccCCCcchHhhcC
Confidence            0111 23 3899999999999998876433 2    2345688889 9999999999999999987641     22 111


Q ss_pred             -cCceeEEeccCH
Q psy14358        300 -YSKMDLQHNLSQ  311 (381)
Q Consensus       300 -~~~~i~~H~~sp  311 (381)
                       ..-.+++||..-
T Consensus       332 p~~P~vSlHH~~~  344 (537)
T PLN03153        332 PIAPFVSIHHVEA  344 (537)
T ss_pred             CCCCceeeeeccc
Confidence             123578887764

>KOG3708|consensus

Probab=96.62  E-value=0.0064  Score=63.11  Aligned_cols=154  Identities=15%  Similarity=0.172  Sum_probs=103.8

Q ss_pred             cEEEEEECCCCCHHHHHHHHHHhccC-ceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCC-chhHHHHHHHHHHH
Q psy14358         86 VYLVLIHSAPYNYDKRRLIRNTWGTR-VSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYR-NLTYKHTMVFKWVV  163 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aIR~TWg~~-v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~-NLt~Ktl~~lkw~~  163 (381)
                      .++++|+|.   ..---+|-.|=+.. -++.|+.+.+.-.            .|.-|.....-|. +=....-+.++++.
T Consensus        27 rl~~aVmte---~tlA~a~NrT~ahhvprv~~F~~~~~i~------------~~~a~~~~vs~~d~r~~~~~s~vl~~l~   91 (681)
T KOG3708|consen   27 RLMAAVMTE---STLALAINRTLAHHVPRVHLFADSSRID------------NDLAQLTNVSPYDLRGQKTHSMVLGLLF   91 (681)
T ss_pred             HHHHHHHHH---HHHHHHHHHHHHhhcceeEEeecccccc------------ccHhhccccCccccCccccHHHHHHHHH
Confidence            788888882   25667888888883 3555666665111            1111111111222 22334557788888


Q ss_pred             HhC-CCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCCcc-ccc
Q psy14358        164 YNC-PHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHC-HGN  241 (381)
Q Consensus       164 ~~c-p~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y~-~G~  241 (381)
                      +++ .+++|++-+-||+|||.+.|++.+...+.   ..++|+|.-...++                   +.    | .|.
T Consensus        92 ~~~~~~YDwFll~~D~tYv~a~~L~~l~~hmsi---n~dlymGEe~~~gs-------------------~r----C~l~~  145 (681)
T KOG3708|consen   92 NMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMSI---NEDLYMGEEAEDGS-------------------GR----CRLDT  145 (681)
T ss_pred             HhhccccceEEEecCcceecHHHHHHHHhhccc---ccccccchhhhCcc-------------------Cc----ccccc
Confidence            877 47999999999999999999999998875   67899996411111                   11    5 589


Q ss_pred             eEeeCHHHHHHHHHHhccCCC---CCCccchhhHHhhHH-hCCCc
Q psy14358        242 ALLYSPDVVFKLYQHLQTDQE---YFWVDDVFITGIVFS-KLNLT  282 (381)
Q Consensus       242 gYvLS~d~a~~l~~~~~~~~~---~~~~EDV~vTGi~l~-~~gi~  282 (381)
                      ||+||+.++.++-.+-.. +.   .-.=.|+.+ |-|.. ..|+.
T Consensus       146 G~LLS~s~l~~lrnnle~-C~~~~lsad~d~~l-grCi~~At~v~  188 (681)
T KOG3708|consen  146 GMLLSQSLLHALRNNLEG-CRNDILSADPDEWL-GRCIQDATGVG  188 (681)
T ss_pred             ceeecHHHHHHHHhhHHH-hhcccccCCcHHHH-HHHHHHhhcCC
Confidence            999999999999887655 33   234567999 99984 44554

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.28  E-value=0.056  Score=49.22  Aligned_cols=97  Identities=15%  Similarity=0.231  Sum_probs=60.3

Q ss_pred             EEEECCCCCHHHHHHHHHHhcc-CceEEEEecCCChhhHH-HHHHHHhhCCCEE-----EecccCCCCchhHHHHHHHHH
Q psy14358         89 VLIHSAPYNYDKRRLIRNTWGT-RVSVYFFIGETDPSNQT-RLDIESETYHDIV-----QGRFWDSYRNLTYKHTMVFKW  161 (381)
Q Consensus        89 i~V~S~p~~~~rR~aIR~TWg~-~v~~~FvlG~~~~~~~~-~L~~E~~~~~DII-----~~df~DsY~NLt~Ktl~~lkw  161 (381)
                      |.|.|-+...+||+.+.+.... .+..-|+-|..+..... .+..   .+..-.     .-.+.-+...=++-++..++-
T Consensus         4 i~vInL~~~~~Rr~~~~~~~~~~~~~~e~~~Avdg~~l~~~~~~~---~~~~~~~~~~~~~~lt~gEiGC~lSH~~~w~~   80 (200)
T PF01755_consen    4 IYVINLDRSTERRERIQQQLAKLGINFEFFDAVDGRDLSEDELFR---RYDPELFKKRYGRPLTPGEIGCALSHIKAWQR   80 (200)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHcCCceEEEEeecccccchHHHHH---HhhhhhhhccccccCCcceEeehhhHHHHHHH
Confidence            5677888889999999988776 66666766665222221 1111   111111     112233334446778888888


Q ss_pred             HHHhCCCccEEEEeCCceeeeHHHHHHHHH
Q psy14358        162 VVYNCPHVKYVFKLDDDVFMNVIQLDELLT  191 (381)
Q Consensus       162 ~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~  191 (381)
                      +.+.  +.++++-..||+.++.+ +.+.|.
T Consensus        81 ~v~~--~~~~~lIlEDDv~~~~~-f~~~l~  107 (200)
T PF01755_consen   81 IVDS--GLEYALILEDDVIFDPD-FKEFLE  107 (200)
T ss_pred             HHHc--CCCeEEEEecccccccc-HHHHHH
Confidence            8765  68999999999999855 444443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=95.87  E-value=0.34  Score=44.15  Aligned_cols=186  Identities=15%  Similarity=0.128  Sum_probs=87.2

Q ss_pred             EEEEEECCCCCHHHHHHHHHHhcc---CceEEEEecCCChhhHHHHHHHHhhCCCE--EEecccCCCCch--hHHHHHHH
Q psy14358         87 YLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGETDPSNQTRLDIESETYHDI--VQGRFWDSYRNL--TYKHTMVF  159 (381)
Q Consensus        87 Lli~V~S~p~~~~rR~aIR~TWg~---~v~~~FvlG~~~~~~~~~L~~E~~~~~DI--I~~df~DsY~NL--t~Ktl~~l  159 (381)
                      +.|+|++..+...-++.++.--..   .+.++.+...++.+..+.+++-.+.+..+  -.+.-.   .|.  +.|. ..+
T Consensus         3 v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~---~~~g~~~k~-~a~   78 (228)
T PF13641_consen    3 VSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRP---RNPGPGGKA-RAL   78 (228)
T ss_dssp             EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE-------HHHHHHH-HHH
T ss_pred             EEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecC---CCCCcchHH-HHH
Confidence            456777766544445555554433   56666655444444445555555566553  222111   223  2343 355


Q ss_pred             HHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCC-----ccccccccccCCCC
Q psy14358        160 KWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRS-----KWRVSFSEYRDHFY  234 (381)
Q Consensus       160 kw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~s-----Kwyv~~~~yp~~~y  234 (381)
                      +++.++. +.+|++..|||+.+..+-|.+.+.....  ++-....|..........-....     .|+...... ....
T Consensus        79 n~~~~~~-~~d~i~~lD~D~~~~p~~l~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  154 (228)
T PF13641_consen   79 NEALAAA-RGDYILFLDDDTVLDPDWLERLLAAFAD--PGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFRSG-RRAL  154 (228)
T ss_dssp             HHHHHH----SEEEEE-SSEEE-CHHHHHHHHHHHB--SS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-TT--B--
T ss_pred             HHHHHhc-CCCEEEEECCCcEECHHHHHHHHHHHHh--CCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhhhh-hccc
Confidence            7777777 6999999999999988877776665511  13334444431111000000001     111100000 0111


Q ss_pred             -CCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358        235 -PPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       235 -P~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                       ..++.|++.++.+++++++-.-    .+....||..+ +.-+.+.|.+...
T Consensus       155 ~~~~~~G~~~~~rr~~~~~~g~f----d~~~~~eD~~l-~~r~~~~G~~~~~  201 (228)
T PF13641_consen  155 GVAFLSGSGMLFRRSALEEVGGF----DPFILGEDFDL-CLRLRAAGWRIVY  201 (228)
T ss_dssp             --S-B--TEEEEEHHHHHHH-S------SSSSSHHHHH-HHHHHHTT--EEE
T ss_pred             ceeeccCcEEEEEHHHHHHhCCC----CCCCcccHHHH-HHHHHHCCCcEEE
Confidence             2456899999999999888621    22455599999 8888777776553

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.76  E-value=0.81  Score=38.75  Aligned_cols=84  Identities=18%  Similarity=0.191  Sum_probs=56.5

Q ss_pred             CccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCce-EEEeeeecCCcceeccCCccccccccccCCCCCCccccceEeeC
Q psy14358        168 HVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNL-LMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYS  246 (381)
Q Consensus       168 ~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l-~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y~~G~gYvLS  246 (381)
                      +.+|++..|||..+..+.+...++....   .+.. .++..                              +.|++.+++
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~---~~~~~~~~~~------------------------------~~~~~~~~~  120 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQ---DPDVGIVGPK------------------------------VSGAFLLVR  120 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHh---CCCceEEEcc------------------------------CceeeEeee
Confidence            7999999999999998888777764321   1121 11110                              689999999


Q ss_pred             HHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecC
Q psy14358        247 PDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       247 ~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      +++++.+-..... . ....||..+ ..-+...|.+....+
T Consensus       121 ~~~~~~~~~~~~~-~-~~~~eD~~~-~~~~~~~g~~i~~~~  158 (166)
T cd04186         121 REVFEEVGGFDED-F-FLYYEDVDL-CLRARLAGYRVLYVP  158 (166)
T ss_pred             HHHHHHcCCCChh-h-hccccHHHH-HHHHHHcCCeEEEcc
Confidence            9998876432222 1 126699998 776666677665543

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=94.30  E-value=0.48  Score=40.49  Aligned_cols=115  Identities=14%  Similarity=0.143  Sum_probs=73.9

Q ss_pred             EEEECCCCCHHHHHHHHHHhcc-CceEEEEecCCChhhH-HHHHHHHhhCCC-EEEecccCCCCchhHHHHHHHHHHHHh
Q psy14358         89 VLIHSAPYNYDKRRLIRNTWGT-RVSVYFFIGETDPSNQ-TRLDIESETYHD-IVQGRFWDSYRNLTYKHTMVFKWVVYN  165 (381)
Q Consensus        89 i~V~S~p~~~~rR~aIR~TWg~-~v~~~FvlG~~~~~~~-~~L~~E~~~~~D-II~~df~DsY~NLt~Ktl~~lkw~~~~  165 (381)
                      +.|.|-+...+||+.+++.-.. .+..-|+-|....+.. ..+......... ....++.-+...-.+-++..++-+.+.
T Consensus         2 i~vInL~~~~~Rr~~~~~~~~~~~~~~~~~~Avd~~~~~~~~~~~~~~~~~~~~~~~~l~~gEiGC~lSH~~~w~~~~~~   81 (128)
T cd06532           2 IFVINLDRSTDRRERMEAQLAALGLDFEFFDAVDGKDLSEEELAALYDALFLPRYGRPLTPGEIGCFLSHYKLWQKIVES   81 (128)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHcCCCeEEEeccccccCCHHHHHHHhHHHhhhhcCCCCChhhHHHHHHHHHHHHHHHHc
Confidence            4567778888999999987666 6677777776622221 122221110000 111223334445567777788777764


Q ss_pred             CCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCCccccceEee
Q psy14358        166 CPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLY  245 (381)
Q Consensus       166 cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y~~G~gYvL  245 (381)
                        +.++.+-..||+.+..+                                                      +..||++
T Consensus        82 --~~~~alIlEDDv~~~~~------------------------------------------------------~~~~Y~v  105 (128)
T cd06532          82 --NLEYALILEDDAILDPD------------------------------------------------------GTAGYLV  105 (128)
T ss_pred             --CCCeEEEEccCcEECCC------------------------------------------------------CceEEEe
Confidence              57889999999875433                                                      5679999


Q ss_pred             CHHHHHHHHHHhcc
Q psy14358        246 SPDVVFKLYQHLQT  259 (381)
Q Consensus       246 S~d~a~~l~~~~~~  259 (381)
                      |++.|+++++....
T Consensus       106 s~~~A~~ll~~~~~  119 (128)
T cd06532         106 SRKGAKKLLAALEP  119 (128)
T ss_pred             CHHHHHHHHHhCCC
Confidence            99999999987754

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=94.29  E-value=2.3  Score=38.09  Aligned_cols=142  Identities=10%  Similarity=0.069  Sum_probs=82.7

Q ss_pred             HHHhccCceEEEEecCCChhhHHHHHHHHhhCC--CEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeee
Q psy14358        105 RNTWGTRVSVYFFIGETDPSNQTRLDIESETYH--DIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMN  182 (381)
Q Consensus       105 R~TWg~~v~~~FvlG~~~~~~~~~L~~E~~~~~--DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvn  182 (381)
                      .+++. ...++++...++....+.+++-...+.  ++........ .....|.- .+..+.+++ +.+|++..|+|+.+.
T Consensus        25 ~q~~~-~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~-~~n~g~~~a-~~d~i~~~D~D~~~~  100 (196)
T cd02520          25 QQDYP-KYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEK-VGINPKVN-NLIKGYEEA-RYDILVISDSDISVP  100 (196)
T ss_pred             hccCC-CeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCc-CCCCHhHH-HHHHHHHhC-CCCEEEEECCCceEC
Confidence            33443 477777776663333444554445554  3322211111 12223432 344555555 689999999999998


Q ss_pred             HHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCCccccceEeeCHHHHHHHHHHhccCCC
Q psy14358        183 VIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQE  262 (381)
Q Consensus       183 v~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~  262 (381)
                      .+-|.+.+.....    ++  +|.+ ...                         ++.|++.++.+++.+++-....  ..
T Consensus       101 ~~~l~~l~~~~~~----~~--~~~v-~~~-------------------------~~~g~~~~~r~~~~~~~ggf~~--~~  146 (196)
T cd02520         101 PDYLRRMVAPLMD----PG--VGLV-TCL-------------------------CAFGKSMALRREVLDAIGGFEA--FA  146 (196)
T ss_pred             hhHHHHHHHHhhC----CC--CCeE-Eee-------------------------cccCceeeeEHHHHHhccChHH--Hh
Confidence            8777777765421    11  1222 100                         5689999999999998753322  12


Q ss_pred             CCCccchhhHHhhHHhCCCceee
Q psy14358        263 YFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       263 ~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                      ....||..+ +.-+...|.+...
T Consensus       147 ~~~~eD~~l-~~rl~~~G~~i~~  168 (196)
T cd02520         147 DYLAEDYFL-GKLIWRLGYRVVL  168 (196)
T ss_pred             HHHHHHHHH-HHHHHHcCCeEEE
Confidence            234699999 7877777766553

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=94.28  E-value=0.89  Score=45.82  Aligned_cols=188  Identities=11%  Similarity=0.041  Sum_probs=98.2

Q ss_pred             EEEEEECCCCCHHHHHHHHHHhcc---CceEEEEecCCChhhHHHHHHHHhhCCC--EEEecccCCCCchhHHHHHHHHH
Q psy14358         87 YLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGETDPSNQTRLDIESETYHD--IVQGRFWDSYRNLTYKHTMVFKW  161 (381)
Q Consensus        87 Lli~V~S~p~~~~rR~aIR~TWg~---~v~~~FvlG~~~~~~~~~L~~E~~~~~D--II~~df~DsY~NLt~Ktl~~lkw  161 (381)
                      +-|+|++.-+...-.+.++.-=.+   ...++++.+.++....+.+++=.++|.+  |... ..+.-.+...|.-...+ 
T Consensus        43 VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v-~~~~~~G~~~K~~~l~~-  120 (373)
T TIGR03472        43 VSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLV-IDARRHGPNRKVSNLIN-  120 (373)
T ss_pred             eEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEE-ECCCCCCCChHHHHHHH-
Confidence            446666655433333334322222   4777777666633333333333345665  3222 11111223346544433 


Q ss_pred             HHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCC--------cccccccccc-CC
Q psy14358        162 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRS--------KWRVSFSEYR-DH  232 (381)
Q Consensus       162 ~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~s--------Kwyv~~~~yp-~~  232 (381)
                      +.+.+ +.++++..|+|+.+..+-|.+.+.....  ++-.+..|.. ..  .+..+..+        -++.|..... ..
T Consensus       121 ~~~~a-~ge~i~~~DaD~~~~p~~L~~lv~~~~~--~~v~~V~~~~-~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  194 (373)
T TIGR03472       121 MLPHA-RHDILVIADSDISVGPDYLRQVVAPLAD--PDVGLVTCLY-RG--RPVPGFWSRLGAMGINHNFLPSVMVARAL  194 (373)
T ss_pred             HHHhc-cCCEEEEECCCCCcChhHHHHHHHHhcC--CCcceEeccc-cC--CCCCCHHHHHHHHHhhhhhhHHHHHHHhc
Confidence            44555 7999999999999988888777766532  1223333322 11  10000000        1122110000 00


Q ss_pred             CCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358        233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       233 ~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                      .-+.+|.|.++++.+++.+++--....  ...-.||+.+ |.-+.+.|.+..-
T Consensus       195 ~~~~~~~G~~~a~RR~~l~~iGGf~~~--~~~~~ED~~l-~~~i~~~G~~v~~  244 (373)
T TIGR03472       195 GRARFCFGATMALRRATLEAIGGLAAL--AHHLADDYWL-GELVRALGLRVVL  244 (373)
T ss_pred             cCCccccChhhheeHHHHHHcCChHHh--cccchHHHHH-HHHHHHcCCeEEe
Confidence            113568899999999999987644322  2223599999 8888888877653

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.20  E-value=1.9  Score=38.86  Aligned_cols=166  Identities=10%  Similarity=0.024  Sum_probs=84.9

Q ss_pred             HHHhcc-CceEEEEecCCChhhHHHHHHHHhhC--CCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceee
Q psy14358        105 RNTWGT-RVSVYFFIGETDPSNQTRLDIESETY--HDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFM  181 (381)
Q Consensus       105 R~TWg~-~v~~~FvlG~~~~~~~~~L~~E~~~~--~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fv  181 (381)
                      ++|+.. .+.++.+-+.++....+.+. +....  ..+......+ -.|. .|. .++++..+++ +.+|++.+|+|..+
T Consensus        21 ~q~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~~~~~v~~~~~~~-~~~~-g~~-~a~n~g~~~~-~~d~i~~~D~D~~~   95 (229)
T cd04192          21 ALDYPKEKFEVILVDDHSTDGTVQILE-FAAAKPNFQLKILNNSR-VSIS-GKK-NALTTAIKAA-KGDWIVTTDADCVV   95 (229)
T ss_pred             hCCCCCCceEEEEEcCCCCcChHHHHH-HHHhCCCcceEEeeccC-cccc-hhH-HHHHHHHHHh-cCCEEEEECCCccc
Confidence            334443 25565555544333334444 22233  3444454443 1222 233 3456666666 78999999999999


Q ss_pred             eHHHHHHHHHhcCCCCCCCceEEEeeeecCCcc---eeccCCcccccc---ccccCCCCCCccccceEeeCHHHHHHHHH
Q psy14358        182 NVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPV---LRTYRSKWRVSF---SEYRDHFYPPHCHGNALLYSPDVVFKLYQ  255 (381)
Q Consensus       182 nv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~---~R~~~sKwyv~~---~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~  255 (381)
                      ..+-|.+.+.....  .....+.|.. ......   .+-..-.+....   ........+..+.|++.++++++.+++--
T Consensus        96 ~~~~l~~l~~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~gg  172 (229)
T cd04192          96 PSNWLLTFVAFIQK--EQIGLVAGPV-IYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEVGG  172 (229)
T ss_pred             CHHHHHHHHHHhhc--CCCcEEeeee-eecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHhcC
Confidence            88777777764432  1234455544 211000   000000000000   00112235566789999999999988753


Q ss_pred             HhccCCCCCCccchhhHHhhHHhCCC
Q psy14358        256 HLQTDQEYFWVDDVFITGIVFSKLNL  281 (381)
Q Consensus       256 ~~~~~~~~~~~EDV~vTGi~l~~~gi  281 (381)
                      -..  ......||..+ +.-+...|.
T Consensus       173 f~~--~~~~~~eD~~~-~~~~~~~g~  195 (229)
T cd04192         173 FEG--NDHIASGDDEL-LLAKVASKY  195 (229)
T ss_pred             Ccc--ccccccCCHHH-HHHHHHhCC
Confidence            322  22355688887 665555555

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=93.91  E-value=3.1  Score=42.05  Aligned_cols=190  Identities=9%  Similarity=0.053  Sum_probs=97.1

Q ss_pred             cEEEEEECCCCCHHHHHHH----HHHhccCceEEEEecCCChhhHHHHHHHHhhCC---CEEEecccCCCCchhHHH---
Q psy14358         86 VYLVLIHSAPYNYDKRRLI----RNTWGTRVSVYFFIGETDPSNQTRLDIESETYH---DIVQGRFWDSYRNLTYKH---  155 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aI----R~TWg~~v~~~FvlG~~~~~~~~~L~~E~~~~~---DII~~df~DsY~NLt~Kt---  155 (381)
                      .+-|+|++.-+...-.+.+    .+++.....++++-+.+++...+.+++-.+++.   .+......+.-.+-..|.   
T Consensus        41 ~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A~  120 (384)
T TIGR03469        41 AVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWAV  120 (384)
T ss_pred             CEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHHH
Confidence            4556666665433333333    334432456666665552222222222223333   344333222222233453   


Q ss_pred             HHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCcccccc------ccc
Q psy14358        156 TMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSF------SEY  229 (381)
Q Consensus       156 l~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~------~~y  229 (381)
                      -.+++.+.+.+++.+|++.+|+|+.+..+.+.+.+.....  .+..+ .+.......   .+...+..++.      ..+
T Consensus       121 n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~--~~~~~-vs~~~~~~~---~~~~~~~~~~~~~~~~~~~~  194 (384)
T TIGR03469       121 SQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARA--EGLDL-VSLMVRLRC---ESFWEKLLIPAFVFFFQKLY  194 (384)
T ss_pred             HHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHh--CCCCE-EEecccccC---CCHHHHHHHHHHHHHHHHhc
Confidence            3356666666666899999999999998887777765421  12222 222201000   00001110010      001


Q ss_pred             c------CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCcee
Q psy14358        230 R------DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHA  284 (381)
Q Consensus       230 p------~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~  284 (381)
                      |      .......+.|++.++++++.+++--.... . ....||+.+ +.-+++.|.+..
T Consensus       195 ~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~-~-~~~~ED~~L-~~r~~~~G~~v~  252 (384)
T TIGR03469       195 PFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAI-R-GALIDDCTL-AAAVKRSGGRIW  252 (384)
T ss_pred             chhhhcCCCccceeecceEEEEEHHHHHHcCCHHHH-h-hCcccHHHH-HHHHHHcCCcEE
Confidence            1      01123446799999999999987443322 1 224799999 888887875544

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.79  E-value=2  Score=38.23  Aligned_cols=156  Identities=10%  Similarity=0.065  Sum_probs=76.8

Q ss_pred             CceEEEEecCCChhhHHHHHHHHhhCCC-EEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHH
Q psy14358        111 RVSVYFFIGETDPSNQTRLDIESETYHD-IVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL  189 (381)
Q Consensus       111 ~v~~~FvlG~~~~~~~~~L~~E~~~~~D-II~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~  189 (381)
                      .+.++++-..+.....+.+++-..+++. +....... -.+....    +......+ +.+|++..|+|..+..+.+.+.
T Consensus        27 ~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~----~n~g~~~~-~g~~v~~ld~Dd~~~~~~l~~~  100 (214)
T cd04196          27 NDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGK-NLGVARN----FESLLQAA-DGDYVFFCDQDDIWLPDKLERL  100 (214)
T ss_pred             CeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCC-CccHHHH----HHHHHHhC-CCCEEEEECCCcccChhHHHHH
Confidence            4666666544433333444444444432 33332222 2222222    22334444 7999999999999887777777


Q ss_pred             HHh-cCCCCCCCceEEEeeee--cCCcceec-cC-CccccccccccCCCCCCccccceEeeCHHHHHHHHHHhccCCCCC
Q psy14358        190 LTR-TLSPHGTRNLLMCPIVW--EKLPVLRT-YR-SKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYF  264 (381)
Q Consensus       190 L~~-~~~~~~~~~l~~G~~~~--~~~~~~R~-~~-sKwyv~~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~  264 (381)
                      +.. ...  +...++.|....  ........ .. .....+...+........+.|++.++.+++++++......   ..
T Consensus       101 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~---~~  175 (214)
T cd04196         101 LKAFLKD--DKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELALPFPDA---DV  175 (214)
T ss_pred             HHHHhcC--CCceEEecCcEEECCCCCCcccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhhcccccc---cc
Confidence            775 221  122333333211  11111100 00 0000000001111123566899999999999987643322   25


Q ss_pred             CccchhhHHhhHHh
Q psy14358        265 WVDDVFITGIVFSK  278 (381)
Q Consensus       265 ~~EDV~vTGi~l~~  278 (381)
                      ..||..+ .+.+..
T Consensus       176 ~~~D~~~-~~~~~~  188 (214)
T cd04196         176 IMHDWWL-ALLASA  188 (214)
T ss_pred             ccchHHH-HHHHHH
Confidence            6799888 665554

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=93.25  E-value=4.3  Score=36.97  Aligned_cols=164  Identities=10%  Similarity=-0.042  Sum_probs=83.3

Q ss_pred             CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHH
Q psy14358        111 RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  190 (381)
Q Consensus       111 ~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L  190 (381)
                      ...++.+-+.++.+..+.+++..+++..+....-.+  .+..    .+++.+.+.. +.+|++..|||..+...-|.+.+
T Consensus        31 ~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~--~~~~----~a~N~g~~~a-~~d~v~~lD~D~~~~~~~l~~~~  103 (249)
T cd02525          31 LIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK--RIQS----AGLNIGIRNS-RGDIIIRVDAHAVYPKDYILELV  103 (249)
T ss_pred             ccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC--CCch----HHHHHHHHHh-CCCEEEEECCCccCCHHHHHHHH
Confidence            456666655554344455555444443344332221  1121    3456665554 78999999999999877777766


Q ss_pred             HhcCCCCCCCceEEEeeeecCCcceec-----cCCccccccccccCCC--CCCccccceEeeCHHHHHHHHHHhccCCCC
Q psy14358        191 TRTLSPHGTRNLLMCPIVWEKLPVLRT-----YRSKWRVSFSEYRDHF--YPPHCHGNALLYSPDVVFKLYQHLQTDQEY  263 (381)
Q Consensus       191 ~~~~~~~~~~~l~~G~~~~~~~~~~R~-----~~sKwyv~~~~yp~~~--yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~  263 (381)
                      .....  .......|............     ..+.+......+....  .-.++.|++.++++++.+++.-.  . ...
T Consensus       104 ~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~-~~~  178 (249)
T cd02525         104 EALKR--TGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKVGGF--D-ESL  178 (249)
T ss_pred             HHHhc--CCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHHhCCC--C-ccc
Confidence            54421  12233333331111111000     0000000000000000  01245788889999998776422  1 234


Q ss_pred             CCccchhhHHhhHHhCCCceeecC
Q psy14358        264 FWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       264 ~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      ...||..+ +.-+.+.|.+....+
T Consensus       179 ~~~eD~~l-~~r~~~~G~~~~~~~  201 (249)
T cd02525         179 VRNEDAEL-NYRLRKAGYKIWLSP  201 (249)
T ss_pred             CccchhHH-HHHHHHcCcEEEEcC
Confidence            45799999 777777777766543

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.21  E-value=4.8  Score=35.84  Aligned_cols=95  Identities=18%  Similarity=0.110  Sum_probs=58.2

Q ss_pred             HHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCC
Q psy14358        156 TMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYP  235 (381)
Q Consensus       156 l~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP  235 (381)
                      -.+++++.  ..+.+|++..|||..+..+.+.+.+.....  +.-.+..|.. .       ...+               
T Consensus        69 n~~~~~a~--~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~--~~~~~~~~~~-~-------~~~~---------------  121 (202)
T cd04185          69 YEGVRRAY--ELGYDWIWLMDDDAIPDPDALEKLLAYADK--DNPQFLAPLV-L-------DPDG---------------  121 (202)
T ss_pred             HHHHHHHh--ccCCCEEEEeCCCCCcChHHHHHHHHHHhc--CCceEeccee-E-------cCCC---------------
Confidence            34556665  347899999999999998776666655431  1222222222 1       1000               


Q ss_pred             CccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCce
Q psy14358        236 PHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTH  283 (381)
Q Consensus       236 ~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~  283 (381)
                         .++|.++++++.+++--.. . .-....||+.+ +.-+...|...
T Consensus       122 ---~~~~~~~~~~~~~~~g~~~-~-~~~~~~eD~~~-~~r~~~~G~~i  163 (202)
T cd04185         122 ---SFVGVLISRRVVEKIGLPD-K-EFFIWGDDTEY-TLRASKAGPGI  163 (202)
T ss_pred             ---ceEEEEEeHHHHHHhCCCC-h-hhhccchHHHH-HHHHHHcCCcE
Confidence               4567889999988763211 1 11245699999 88777777765

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=92.17  E-value=7.3  Score=33.85  Aligned_cols=123  Identities=8%  Similarity=-0.091  Sum_probs=70.2

Q ss_pred             HHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCCC
Q psy14358        157 MVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYPP  236 (381)
Q Consensus       157 ~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP~  236 (381)
                      .+++.+.+++ +.+|++-.|+|..+..+.+...+...... +...+..|......... +. ..................
T Consensus        65 ~a~n~~~~~a-~~~~v~~ld~D~~~~~~~~~~~~~~~~~~-~~~~~v~g~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~  140 (202)
T cd06433          65 DAMNKGIALA-TGDIIGFLNSDDTLLPGALLAVVAAFAEH-PEVDVVYGDVLLVDENG-RV-IGRRRPPPFLDKFLLYGM  140 (202)
T ss_pred             HHHHHHHHHc-CCCEEEEeCCCcccCchHHHHHHHHHHhC-CCccEEEeeeEEEcCCC-Cc-ccCCCCcchhhhHHhhcC
Confidence            4456666666 68999999999999988888877433110 23455556541111000 00 011101111111122346


Q ss_pred             ccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecC
Q psy14358        237 HCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       237 Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      ++.|++.++++++.+.+-.-.   ......||..+ .+-+...|......+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~f~---~~~~~~~D~~~-~~r~~~~g~~~~~~~  187 (202)
T cd06433         141 PICHQATFFRRSLFEKYGGFD---ESYRIAADYDL-LLRLLLAGKIFKYLP  187 (202)
T ss_pred             cccCcceEEEHHHHHHhCCCc---hhhCchhhHHH-HHHHHHcCCceEecc
Confidence            677888999999998875322   22334689888 666666777665443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=92.06  E-value=1.7  Score=36.41  Aligned_cols=151  Identities=11%  Similarity=0.078  Sum_probs=72.2

Q ss_pred             CCCHHHH-HHHHHHhccCceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEE
Q psy14358         95 PYNYDKR-RLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVF  173 (381)
Q Consensus        95 p~~~~rR-~aIR~TWg~~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvl  173 (381)
                      ++...+- +.+++.-.....++++-..++.+..+.+++-.+....+......+.. ++.    .++..+.++. +.+|++
T Consensus        10 ~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~-g~~----~~~n~~~~~a-~~~~i~   83 (169)
T PF00535_consen   10 AEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENL-GFS----AARNRGIKHA-KGEYIL   83 (169)
T ss_dssp             TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCS-HHH----HHHHHHHHH---SSEEE
T ss_pred             HHHHHHHHHHHhhccCCCEEEEEeccccccccccccccccccccccccccccccc-ccc----cccccccccc-ceeEEE
Confidence            3444432 34666622256665555555444444444444334455555554432 333    3334444444 566999


Q ss_pred             EeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecC--CcceeccCC--c-ccccc--ccccCCCCCCccccceEeeC
Q psy14358        174 KLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEK--LPVLRTYRS--K-WRVSF--SEYRDHFYPPHCHGNALLYS  246 (381)
Q Consensus       174 K~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~--~~~~R~~~s--K-wyv~~--~~yp~~~yP~Y~~G~gYvLS  246 (381)
                      .+|||.++..+.|...+.....  ......+|......  .........  . +....  .......--.++.|++.+++
T Consensus        84 ~ld~D~~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  161 (169)
T PF00535_consen   84 FLDDDDIISPDWLEELVEALEK--NPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFR  161 (169)
T ss_dssp             EEETTEEE-TTHHHHHHHHHHH--CTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEE
T ss_pred             EeCCCceEcHHHHHHHHHHHHh--CCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEE
Confidence            9999999987755555544321  13345555541111  111111000  0 01100  11111223577889999999


Q ss_pred             HHHHHHH
Q psy14358        247 PDVVFKL  253 (381)
Q Consensus       247 ~d~a~~l  253 (381)
                      +++.+++
T Consensus       162 r~~~~~~  168 (169)
T PF00535_consen  162 RSVFEEI  168 (169)
T ss_dssp             EHHHHHC
T ss_pred             HHHHHhh
Confidence            9998764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=91.55  E-value=6.5  Score=36.58  Aligned_cols=189  Identities=11%  Similarity=0.043  Sum_probs=96.6

Q ss_pred             cEEEEEECCCCCHHHHH---HHHHHhcc--CceEEEEecCCChhhHHHHHHHHhhCCC-EEEecccCCCCchhHHHHHHH
Q psy14358         86 VYLVLIHSAPYNYDKRR---LIRNTWGT--RVSVYFFIGETDPSNQTRLDIESETYHD-IVQGRFWDSYRNLTYKHTMVF  159 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~---aIR~TWg~--~v~~~FvlG~~~~~~~~~L~~E~~~~~D-II~~df~DsY~NLt~Ktl~~l  159 (381)
                      .+-|+|++.-+...-..   .+++.-..  .+.++++-+.+.....+.+++-.+++++ .+..-....-.+..    .++
T Consensus        10 ~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~----~a~   85 (243)
T PLN02726         10 KYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLG----TAY   85 (243)
T ss_pred             eEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHH----HHH
Confidence            45677776544332222   34433322  5667666655533344444444445553 22221111111222    244


Q ss_pred             HHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCc-----ceeccCCcc--ccccccccCC
Q psy14358        160 KWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLP-----VLRTYRSKW--RVSFSEYRDH  232 (381)
Q Consensus       160 kw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~-----~~R~~~sKw--yv~~~~yp~~  232 (381)
                      +.+.+.. +.+|++..|+|..+..+.|.+.+.....  ....+..|........     ..|.-.++.  .+..... ..
T Consensus        86 n~g~~~a-~g~~i~~lD~D~~~~~~~l~~l~~~~~~--~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~  161 (243)
T PLN02726         86 IHGLKHA-SGDFVVIMDADLSHHPKYLPSFIKKQRE--TGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLL-WP  161 (243)
T ss_pred             HHHHHHc-CCCEEEEEcCCCCCCHHHHHHHHHHHHh--cCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHh-CC
Confidence            4444444 6899999999999998888777765422  1345666653111110     011100100  0000111 11


Q ss_pred             CCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecC
Q psy14358        233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       233 ~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                       .-+.+.|++.++++++++.+...... .  ...+|..+ .+-+.+.|.+....+
T Consensus       162 -~~~d~~g~~~~~rr~~~~~i~~~~~~-~--~~~~~~el-~~~~~~~g~~i~~vp  211 (243)
T PLN02726        162 -GVSDLTGSFRLYKRSALEDLVSSVVS-K--GYVFQMEI-IVRASRKGYRIEEVP  211 (243)
T ss_pred             -CCCcCCCcccceeHHHHHHHHhhccC-C--CcEEehHH-HHHHHHcCCcEEEeC
Confidence             12346788889999999999754332 2  22346667 677777888877765

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=90.80  E-value=3.9  Score=34.05  Aligned_cols=137  Identities=10%  Similarity=0.015  Sum_probs=65.2

Q ss_pred             CceEEEEecCCChhhHHHHHHHHhhCCC-EEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHH
Q psy14358        111 RVSVYFFIGETDPSNQTRLDIESETYHD-IVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDEL  189 (381)
Q Consensus       111 ~v~~~FvlG~~~~~~~~~L~~E~~~~~D-II~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~  189 (381)
                      ...++.+-..++....+.+.++...+.- ++.... +.-.++    -..++++.+.+ +.+|++..|+|..+....+.+.
T Consensus        26 ~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~-~~~~g~----~~~~n~~~~~~-~~~~i~~~D~D~~~~~~~l~~~   99 (180)
T cd06423          26 KLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRD-KENGGK----AGALNAGLRHA-KGDIVVVLDADTILEPDALKRL   99 (180)
T ss_pred             ceEEEEEeCCCccchHHHHHHHhccccceEEEEEe-cccCCc----hHHHHHHHHhc-CCCEEEEECCCCCcChHHHHHH
Confidence            3455454444443444445554444322 222222 211121    24556666666 8999999999999987766666


Q ss_pred             HHhcCCCCCCCceEEEeeeecCCc--ceeccC-Ccccccc-cccc---CCCCCCccccceEeeCHHHHHHHH
Q psy14358        190 LTRTLSPHGTRNLLMCPIVWEKLP--VLRTYR-SKWRVSF-SEYR---DHFYPPHCHGNALLYSPDVVFKLY  254 (381)
Q Consensus       190 L~~~~~~~~~~~l~~G~~~~~~~~--~~R~~~-sKwyv~~-~~yp---~~~yP~Y~~G~gYvLS~d~a~~l~  254 (381)
                      +...... +.-....|........  ...... .++.... ...+   .......+.|.++++++++.+++-
T Consensus       100 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g  170 (180)
T cd06423         100 VVPFFAD-PKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALREVG  170 (180)
T ss_pred             HHHhccC-CCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhheecceeecCchHHHHHHHHHHHhC
Confidence            4543210 1222233332111110  011000 0000000 0001   123456678999999999888754

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=90.74  E-value=7.1  Score=35.31  Aligned_cols=186  Identities=13%  Similarity=0.066  Sum_probs=90.0

Q ss_pred             EEEEECCCCCHH-HHHH----HHHHhcc-CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHH
Q psy14358         88 LVLIHSAPYNYD-KRRL----IRNTWGT-RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKW  161 (381)
Q Consensus        88 li~V~S~p~~~~-rR~a----IR~TWg~-~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw  161 (381)
                      -|+|++.-+..+ -++.    ..+++.. .+.++++-..++....+.+++-...+ ++.......   |.-.|.- .+..
T Consensus         4 sviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~---~~~~~~~-~~n~   78 (234)
T cd06421           4 DVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRPD---NRHAKAG-NLNN   78 (234)
T ss_pred             EEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeCC---CCCCcHH-HHHH
Confidence            456666543322 2332    3344444 25666655444333333333322222 333332222   2222221 2344


Q ss_pred             HHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCC-cc---eecc--CCcccccccccc-CCCC
Q psy14358        162 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKL-PV---LRTY--RSKWRVSFSEYR-DHFY  234 (381)
Q Consensus       162 ~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~-~~---~R~~--~sKwyv~~~~yp-~~~y  234 (381)
                      +.++. +.+|++..|+|..+..+.|.+.+...... +.-....|....... ..   .+..  ....+....... ....
T Consensus        79 ~~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (234)
T cd06421          79 ALAHT-TGDFVAILDADHVPTPDFLRRTLGYFLDD-PKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWG  156 (234)
T ss_pred             HHHhC-CCCEEEEEccccCcCccHHHHHHHHHhcC-CCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            44444 78999999999999988777777654310 011122222101010 00   0000  000010000000 0112


Q ss_pred             CCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358        235 PPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       235 P~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                      ..++.|++.++++++.+++-.-    ......||..+ +.-+.+.|.+...
T Consensus       157 ~~~~~g~~~~~r~~~~~~ig~~----~~~~~~eD~~l-~~r~~~~g~~i~~  202 (234)
T cd06421         157 AAFCCGSGAVVRREALDEIGGF----PTDSVTEDLAT-SLRLHAKGWRSVY  202 (234)
T ss_pred             CceecCceeeEeHHHHHHhCCC----CccceeccHHH-HHHHHHcCceEEE
Confidence            4667899999999999886422    12344799999 8777777765543

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=90.72  E-value=14  Score=35.63  Aligned_cols=122  Identities=16%  Similarity=0.112  Sum_probs=65.4

Q ss_pred             HHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeec-CC-cc--------eec-----cCCcc
Q psy14358        158 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWE-KL-PV--------LRT-----YRSKW  222 (381)
Q Consensus       158 ~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~-~~-~~--------~R~-----~~sKw  222 (381)
                      +.+.+.++. +.+|++..|+|+.+..+-|.+.+.....   .+....|..... .. ..        .+.     -...|
T Consensus        74 a~N~g~~~A-~gd~i~fLD~D~~~~~~wL~~ll~~l~~---~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (299)
T cd02510          74 ARIAGARAA-TGDVLVFLDSHCEVNVGWLEPLLARIAE---NRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKW  149 (299)
T ss_pred             HHHHHHHHc-cCCEEEEEeCCcccCccHHHHHHHHHHh---CCCeEEEeeeccccCCCeeEecCCCceeEEecccceecc
Confidence            344444554 6899999999999987766666654421   112233321010 00 00        000     00111


Q ss_pred             cccccc-----cc-CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358        223 RVSFSE-----YR-DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       223 yv~~~~-----yp-~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                      ......     .+ .....+.+.|++.++++++.+.+-.-... ......||+-+ .+=+..+|.+...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~-~~~~~~ED~Dl-~~R~~~~G~~i~~  216 (299)
T cd02510         150 LPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEG-MDIWGGENLEL-SFKVWQCGGSIEI  216 (299)
T ss_pred             ccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCc-ccccCchhHHH-HHHHHHcCCeEEE
Confidence            111000     01 11234567899999999999888543333 33334699998 6666667776544

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=90.69  E-value=5.7  Score=36.13  Aligned_cols=76  Identities=16%  Similarity=0.089  Sum_probs=45.6

Q ss_pred             CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHH
Q psy14358        111 RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  190 (381)
Q Consensus       111 ~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L  190 (381)
                      ...++++...++....+.+ ++...+..+....- + -.   .|.- ++....+.. +.+|++..|+|+.+..+.|.+.+
T Consensus        28 ~~eiivvdd~s~d~~~~~l-~~~~~~~~~~v~~~-~-~~---g~~~-a~n~g~~~a-~~d~v~~lD~D~~~~~~~l~~l~   99 (235)
T cd06434          28 PLEIIVVTDGDDEPYLSIL-SQTVKYGGIFVITV-P-HP---GKRR-ALAEGIRHV-TTDIVVLLDSDTVWPPNALPEML   99 (235)
T ss_pred             CCEEEEEeCCCChHHHHHH-HhhccCCcEEEEec-C-CC---ChHH-HHHHHHHHh-CCCEEEEECCCceeChhHHHHHH
Confidence            4566666555533333433 34455666655432 1 12   2332 233333333 79999999999999999888888


Q ss_pred             HhcC
Q psy14358        191 TRTL  194 (381)
Q Consensus       191 ~~~~  194 (381)
                      ....
T Consensus       100 ~~~~  103 (235)
T cd06434         100 KPFE  103 (235)
T ss_pred             Hhcc
Confidence            7663

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=90.60  E-value=5.6  Score=34.78  Aligned_cols=138  Identities=12%  Similarity=0.017  Sum_probs=72.2

Q ss_pred             CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHH
Q psy14358        111 RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELL  190 (381)
Q Consensus       111 ~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L  190 (381)
                      ...++.+-+.++....+.+++..+++..+.......+.    .|. .+++.+.+++ ..+|++..|+|.....+.|.+.+
T Consensus        29 ~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~----G~~-~a~n~g~~~a-~~d~i~~~D~D~~~~~~~l~~l~  102 (181)
T cd04187          29 DYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNF----GQQ-AALLAGLDHA-RGDAVITMDADLQDPPELIPEML  102 (181)
T ss_pred             CeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCC----CcH-HHHHHHHHhc-CCCEEEEEeCCCCCCHHHHHHHH
Confidence            55666665555333334444444455555544443322    122 3445555555 56999999999999877676666


Q ss_pred             HhcCCCCCCCceEEEeeeecCCc-ceeccCCccccccccccCCCCCCccccceEeeCHHHHHHHHHHhc
Q psy14358        191 TRTLSPHGTRNLLMCPIVWEKLP-VLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQ  258 (381)
Q Consensus       191 ~~~~~~~~~~~l~~G~~~~~~~~-~~R~~~sKwyv~~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~  258 (381)
                      .....   .....+|.. ..... ..+.-.++.+...........-+...|++.++++++++.+..-..
T Consensus       103 ~~~~~---~~~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i~~~d~  167 (181)
T cd04187         103 AKWEE---GYDVVYGVR-KNRKESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDALLLLPE  167 (181)
T ss_pred             HHHhC---CCcEEEEEe-cCCcchHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHHHHhcCC
Confidence            65432   345666654 21110 000000111100000001122355678889999999998875443

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=89.85  E-value=0.47  Score=45.65  Aligned_cols=72  Identities=13%  Similarity=0.072  Sum_probs=50.5

Q ss_pred             ccceEeeCHHHHHHHHHHhcc---CCCCCCccchhhHHhhHHhCCCceeecCCCCCCC-----CCee-ee-cCceeEEec
Q psy14358        239 HGNALLYSPDVVFKLYQHLQT---DQEYFWVDDVFITGIVFSKLNLTHAKFSWWPGHD-----EPVV-IL-YSKMDLQHN  308 (381)
Q Consensus       239 ~G~gYvLS~d~a~~l~~~~~~---~~~~~~~EDV~vTGi~l~~~gi~~~~~~~f~~~~-----~~~~-~~-~~~~i~~H~  308 (381)
                      +|+|+.+|..+|+.|.+.-..   ..+.+.--|-.| ..|+..+|++.+.-++||...     .++. .. ..-++++||
T Consensus        12 GGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i-~~C~~~lgv~LT~e~g~hQ~Di~Gd~~G~~~a~~~~pl~SlHH   90 (255)
T PF04646_consen   12 GGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRI-QACIAELGVPLTKEPGFHQMDIRGDPSGFLEAHPLAPLVSLHH   90 (255)
T ss_pred             cCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHH-HHHHHHhCCCceecCCceeEeeccCcceeeecCCCCceeeeee
Confidence            899999999999999987533   134445578888 888888999999888886542     2221 11 123677787


Q ss_pred             cCH
Q psy14358        309 LSQ  311 (381)
Q Consensus       309 ~sp  311 (381)
                      ..-
T Consensus        91 ~~~   93 (255)
T PF04646_consen   91 WDS   93 (255)
T ss_pred             hhh
Confidence            754

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=89.59  E-value=9.2  Score=35.25  Aligned_cols=180  Identities=8%  Similarity=-0.042  Sum_probs=87.4

Q ss_pred             cEEEEEECCCCCHHHHHHHHHHhcc-----CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHH
Q psy14358         86 VYLVLIHSAPYNYDKRRLIRNTWGT-----RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFK  160 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aIR~TWg~-----~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lk  160 (381)
                      .+-|+|++.-+...-...++.-..+     ...++++...++....+.+.+..+.  .+......+   |. .|. ..++
T Consensus        30 ~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~---~~-g~~-~a~n  102 (251)
T cd06439          30 TVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPE---RR-GKA-AALN  102 (251)
T ss_pred             EEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCC---CC-ChH-HHHH
Confidence            5667777766544344455554444     2456555544433333333333222  343332222   21 232 3455


Q ss_pred             HHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcc--eeccCCcccccccc--cc-CCCCC
Q psy14358        161 WVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPV--LRTYRSKWRVSFSE--YR-DHFYP  235 (381)
Q Consensus       161 w~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~--~R~~~sKwyv~~~~--yp-~~~yP  235 (381)
                      ...++. +.+|++-.|+|+.+..+-|.+.+.....  +.-....|.. ......  .+.....|......  +. ....+
T Consensus       103 ~gi~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~--~~~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (251)
T cd06439         103 RALALA-TGEIVVFTDANALLDPDALRLLVRHFAD--PSVGAVSGEL-VIVDGGGSGSGEGLYWKYENWLKRAESRLGST  178 (251)
T ss_pred             HHHHHc-CCCEEEEEccccCcCHHHHHHHHHHhcC--CCccEEEeEE-EecCCcccchhHHHHHHHHHHHHHHHHhcCCe
Confidence            555555 5699999999999997666666665532  1223333433 211110  00000011110000  00 01123


Q ss_pred             CccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCcee
Q psy14358        236 PHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHA  284 (381)
Q Consensus       236 ~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~  284 (381)
                      ..+.|+++.+.+++.+      .. ......||..+ +.-+...|.+..
T Consensus       179 ~~~~g~~~~~rr~~~~------~~-~~~~~~eD~~l-~~~~~~~G~~~~  219 (251)
T cd06439         179 VGANGAIYAIRRELFR------PL-PADTINDDFVL-PLRIARQGYRVV  219 (251)
T ss_pred             eeecchHHHhHHHHhc------CC-CcccchhHHHH-HHHHHHcCCeEE
Confidence            4456777777777665      11 22344799998 666666676544

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>PRK11204 N-glycosyltransferase; Provisional

Probab=89.28  E-value=16  Score=37.00  Aligned_cols=180  Identities=10%  Similarity=0.044  Sum_probs=95.7

Q ss_pred             cEEEEEECCCCCHHHHHHHHHHhcc---CceEEEEecCC-ChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHH
Q psy14358         86 VYLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKW  161 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aIR~TWg~---~v~~~FvlG~~-~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw  161 (381)
                      .+-|+|++.-+...-++.++.-=.+   ...+ +++... +++..+.+++..+++..+...+..+   |. .|. .+++.
T Consensus        55 ~vsViIp~yne~~~i~~~l~sl~~q~yp~~ei-iVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~---n~-Gka-~aln~  128 (420)
T PRK11204         55 GVSILVPCYNEGENVEETISHLLALRYPNYEV-IAINDGSSDNTGEILDRLAAQIPRLRVIHLAE---NQ-GKA-NALNT  128 (420)
T ss_pred             CEEEEEecCCCHHHHHHHHHHHHhCCCCCeEE-EEEECCCCccHHHHHHHHHHhCCcEEEEEcCC---CC-CHH-HHHHH
Confidence            4567777766543333333332222   3444 444444 4445555555566666665554333   32 243 44666


Q ss_pred             HHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCcccccc--cccc---------
Q psy14358        162 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSF--SEYR---------  230 (381)
Q Consensus       162 ~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~--~~yp---------  230 (381)
                      +.+++ +.+|++..|+|..+..+.|.+.++....   .++  .|.+ ... +..++..+ +.-..  .+|.         
T Consensus       129 g~~~a-~~d~i~~lDaD~~~~~d~L~~l~~~~~~---~~~--v~~v-~g~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  199 (420)
T PRK11204        129 GAAAA-RSEYLVCIDGDALLDPDAAAYMVEHFLH---NPR--VGAV-TGN-PRIRNRST-LLGRIQVGEFSSIIGLIKRA  199 (420)
T ss_pred             HHHHc-CCCEEEEECCCCCCChhHHHHHHHHHHh---CCC--eEEE-ECC-ceeccchh-HHHHHHHHHHHHhhhHHHHH
Confidence            66666 7899999999999999888777765521   112  1211 111 11111110 00000  0000         


Q ss_pred             CC--CCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358        231 DH--FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       231 ~~--~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                      ..  ..+..++|.+.++++++.+++---    .+..-.||+.+ ++-+.+.|.+..-
T Consensus       200 ~~~~~~~~~~~G~~~~~rr~~l~~vgg~----~~~~~~ED~~l-~~rl~~~G~~i~~  251 (420)
T PRK11204        200 QRVYGRVFTVSGVITAFRKSALHEVGYW----STDMITEDIDI-SWKLQLRGWDIRY  251 (420)
T ss_pred             HHHhCCceEecceeeeeeHHHHHHhCCC----CCCcccchHHH-HHHHHHcCCeEEe
Confidence            00  112235788899999998775321    22345699999 8888777776543

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=87.55  E-value=22  Score=32.28  Aligned_cols=185  Identities=10%  Similarity=0.015  Sum_probs=85.7

Q ss_pred             EEECCCCC-HHHHHHHHHHhccCceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCC
Q psy14358         90 LIHSAPYN-YDKRRLIRNTWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPH  168 (381)
Q Consensus        90 ~V~S~p~~-~~rR~aIR~TWg~~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~  168 (381)
                      +|++.-+. ..-++.|..--.+...++.+=+.++.+....  .|. ....+.......+ .+...---.+++.+...  +
T Consensus         2 vI~~yn~~~~~l~~~l~sl~~q~~~iivvDn~s~~~~~~~--~~~-~~~~i~~i~~~~n-~G~~~a~N~g~~~a~~~--~   75 (237)
T cd02526           2 VVVTYNPDLSKLKELLAALAEQVDKVVVVDNSSGNDIELR--LRL-NSEKIELIHLGEN-LGIAKALNIGIKAALEN--G   75 (237)
T ss_pred             EEEEecCCHHHHHHHHHHHhccCCEEEEEeCCCCccHHHH--hhc-cCCcEEEEECCCc-eehHHhhhHHHHHHHhC--C
Confidence            34444444 3334444443333344444434333322221  121 2344444443332 12232233345555432  6


Q ss_pred             ccEEEEeCCceeeeHHHHHHHH---HhcCCCCCCCce-EEEeeeecCCcceecc---CCccccccccccCCC--CCCccc
Q psy14358        169 VKYVFKLDDDVFMNVIQLDELL---TRTLSPHGTRNL-LMCPIVWEKLPVLRTY---RSKWRVSFSEYRDHF--YPPHCH  239 (381)
Q Consensus       169 a~fvlK~DDD~fvnv~~L~~~L---~~~~~~~~~~~l-~~G~~~~~~~~~~R~~---~sKwyv~~~~yp~~~--yP~Y~~  239 (381)
                      ++|++..|+|+.+..+.|.+.+   .....   .... ..|.............   ...+...........  -..++.
T Consensus        76 ~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
T cd02526          76 ADYVLLFDQDSVPPPDMVEKLLAYKILSDK---NSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLI  152 (237)
T ss_pred             CCEEEEECCCCCcCHhHHHHHHHHHHhhcc---CCCeEEEeeeEEcCCCCeeccceeccCccceecccccCCceEeeeee
Confidence            8999999999999977777774   22211   1222 2232211111100000   000110000000011  124456


Q ss_pred             cceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        240 GNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       240 G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                      |+|.++++++.+.+-.-...  -....||+.+ ++-+.+.|.+....
T Consensus       153 ~~~~~~rr~~~~~~ggfd~~--~~~~~eD~d~-~~r~~~~G~~~~~~  196 (237)
T cd02526         153 TSGSLISLEALEKVGGFDED--LFIDYVDTEW-CLRARSKGYKIYVV  196 (237)
T ss_pred             ccceEEcHHHHHHhCCCCHH--HcCccchHHH-HHHHHHcCCcEEEE
Confidence            78889999998886432222  1245689999 77777777765443

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=87.27  E-value=2.2  Score=38.58  Aligned_cols=128  Identities=12%  Similarity=0.013  Sum_probs=78.1

Q ss_pred             hhHHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCC---ccccc--
Q psy14358        151 LTYKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRS---KWRVS--  225 (381)
Q Consensus       151 Lt~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~s---Kwyv~--  225 (381)
                      ...|.-.....+.. -.+.++++-.|+|+.++.+-|.+.+.....  +.-.+..|.. . . .+.++-.+   +-++.  
T Consensus        15 ~N~Kv~nL~~~~~~-~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~--p~vglVt~~~-~-~-~~~~~~~~~l~~~~~~~~   88 (175)
T PF13506_consen   15 CNPKVNNLAQGLEA-GAKYDYLVISDSDIRVPPDYLRELVAPLAD--PGVGLVTGLP-R-G-VPARGFWSRLEAAFFNFL   88 (175)
T ss_pred             CChHHHHHHHHHHh-hCCCCEEEEECCCeeECHHHHHHHHHHHhC--CCCcEEEecc-c-c-cCCcCHHHHHHHHHHhHH
Confidence            34677666666655 248999999999999999988888876643  1333333322 1 1 11111100   01110  


Q ss_pred             cccccCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecC
Q psy14358        226 FSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       226 ~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      ...+..-.-.++|.|+++++.+++.+++---..  ....--||..+ |-.+.+.|.+..-.+
T Consensus        89 ~~~~~a~~~~~~~~G~~m~~rr~~L~~~GG~~~--l~~~ladD~~l-~~~~~~~G~~v~~~~  147 (175)
T PF13506_consen   89 PGVLQALGGAPFAWGGSMAFRREALEEIGGFEA--LADYLADDYAL-GRRLRARGYRVVLSP  147 (175)
T ss_pred             HHHHHHhcCCCceecceeeeEHHHHHHcccHHH--HhhhhhHHHHH-HHHHHHCCCeEEEcc
Confidence            000111124688999999999999998732211  22345799999 888888899877544

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=87.03  E-value=11  Score=34.24  Aligned_cols=117  Identities=10%  Similarity=0.035  Sum_probs=67.4

Q ss_pred             HHHHHHHHhCC-CccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccc------cccc
Q psy14358        157 MVFKWVVYNCP-HVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVS------FSEY  229 (381)
Q Consensus       157 ~~lkw~~~~cp-~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~------~~~y  229 (381)
                      .++.++.+.+. +.+|++..|+|+.+..+.|.+.+.....  +.-.+..|..      ..++....++..      ...+
T Consensus        72 ~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~--~~~~~v~~~~------~~~~~~~~~~~~~~~~~~~~~~  143 (236)
T cd06435          72 GALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDD--PRVGFVQAPQ------DYRDGEESLFKRMCYAEYKGFF  143 (236)
T ss_pred             HHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcC--CCeeEEecCc------cccCCCccHHHHHHhHHHHHHH
Confidence            45777777763 5899999999999999888888776531  1212222211      111111111100      0000


Q ss_pred             ----cC-CC-CCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        230 ----RD-HF-YPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       230 ----p~-~~-yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                          +. .. =..++.|++.++++++.+.+---.    +.+..||+-+ +.=+.+.|.+..-.
T Consensus       144 ~~~~~~~~~~~~~~~~g~~~~~rr~~~~~iGgf~----~~~~~eD~dl-~~r~~~~G~~~~~~  201 (236)
T cd06435         144 DIGMVSRNERNAIIQHGTMCLIRRSALDDVGGWD----EWCITEDSEL-GLRMHEAGYIGVYV  201 (236)
T ss_pred             HHHhccccccCceEEecceEEEEHHHHHHhCCCC----CccccchHHH-HHHHHHCCcEEEEc
Confidence                00 00 013567899999999998874222    2235799999 77777777665443

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=84.87  E-value=40  Score=32.76  Aligned_cols=189  Identities=13%  Similarity=0.090  Sum_probs=99.1

Q ss_pred             EEEEEECCCCCHHHHHHHHHHhcc--CceEEEEecCC-ChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHH
Q psy14358         87 YLVLIHSAPYNYDKRRLIRNTWGT--RVSVYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVV  163 (381)
Q Consensus        87 Lli~V~S~p~~~~rR~aIR~TWg~--~v~~~FvlG~~-~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~  163 (381)
                      +-++|.|.-.-....+.++..=..  ....+.++-.. .....+.+.+..  +.++......++..- ..=.-.+++.+.
T Consensus         5 i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~--~~~v~~i~~~~NlG~-agg~n~g~~~a~   81 (305)
T COG1216           5 ISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARF--FPNVRLIENGENLGF-AGGFNRGIKYAL   81 (305)
T ss_pred             eEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhc--CCcEEEEEcCCCccc-hhhhhHHHHHHh
Confidence            345555555444555555555455  22222234333 222223333322  678776655554210 111114666665


Q ss_pred             HhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCC---cce-ec-----cCCcc-ccccccccC--
Q psy14358        164 YNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKL---PVL-RT-----YRSKW-RVSFSEYRD--  231 (381)
Q Consensus       164 ~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~---~~~-R~-----~~sKw-yv~~~~yp~--  231 (381)
                      ..-  .+|++-.++|+.+..+-|.+.++.....  ......|.......   .+. +.     ....| ..+....+.  
T Consensus        82 ~~~--~~~~l~LN~D~~~~~~~l~~ll~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (305)
T COG1216          82 AKG--DDYVLLLNPDTVVEPDLLEELLKAAEED--PAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDL  157 (305)
T ss_pred             cCC--CcEEEEEcCCeeeChhHHHHHHHHHHhC--CCCeEeeeeEecCCCCcchheeccccccccccceecccccccccc
Confidence            542  2299999999999998888888765321  22334444311100   010 10     01112 222211111  


Q ss_pred             ---CCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358        232 ---HFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       232 ---~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                         .....++.|++.++++++.+++-- -.. .-++..||+-. +.=+.++|.+..-
T Consensus       158 ~~~~~~~~~~~G~~~li~~~~~~~vG~-~de-~~F~y~eD~D~-~~R~~~~G~~i~~  211 (305)
T COG1216         158 SSYLEVVASLSGACLLIRREAFEKVGG-FDE-RFFIYYEDVDL-CLRARKAGYKIYY  211 (305)
T ss_pred             cchhhhhhhcceeeeEEcHHHHHHhCC-CCc-ccceeehHHHH-HHHHHHcCCeEEE
Confidence               112235799999999999999876 222 23578999999 8877888875443

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=83.11  E-value=22  Score=30.73  Aligned_cols=144  Identities=12%  Similarity=0.072  Sum_probs=74.5

Q ss_pred             HHHHHHHhcc-CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCce
Q psy14358        101 RRLIRNTWGT-RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDDV  179 (381)
Q Consensus       101 R~aIR~TWg~-~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD~  179 (381)
                      ..+.+++... ...++.+-..++....+.+++...++..+.......+.. .    -.++....+.. ..+|++..|+|.
T Consensus        17 ~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G-~----~~a~n~g~~~a-~gd~i~~lD~D~   90 (185)
T cd04179          17 ERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFG-K----GAAVRAGFKAA-RGDIVVTMDADL   90 (185)
T ss_pred             HHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCC-c----cHHHHHHHHHh-cCCEEEEEeCCC
Confidence            3455555522 445544444443344555555555666655444444322 1    13444444444 459999999999


Q ss_pred             eeeHHHHHHHHHhcCCCCCCCceEEEeeeecCC----cceeccCCcccccc--ccccCCCCCCccccceEeeCHHHHHHH
Q psy14358        180 FMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKL----PVLRTYRSKWRVSF--SEYRDHFYPPHCHGNALLYSPDVVFKL  253 (381)
Q Consensus       180 fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~----~~~R~~~sKwyv~~--~~yp~~~yP~Y~~G~gYvLS~d~a~~l  253 (381)
                      .+..+.|.+.+.....  .......|.......    ...+.. ..+....  ... ...-.....|+++++++++.+.+
T Consensus        91 ~~~~~~l~~l~~~~~~--~~~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~i  166 (185)
T cd04179          91 QHPPEDIPKLLEKLLE--GGADVVIGSRFVRGGGAGMPLLRRL-GSRLFNFLIRLL-LGVRISDTQSGFRLFRREVLEAL  166 (185)
T ss_pred             CCCHHHHHHHHHHHhc--cCCcEEEEEeecCCCcccchHHHHH-HHHHHHHHHHHH-cCCCCcCCCCceeeeHHHHHHHH
Confidence            9988888777775221  244566666411111    011100 0000000  000 11123445678889999999998


Q ss_pred             H
Q psy14358        254 Y  254 (381)
Q Consensus       254 ~  254 (381)
                      -
T Consensus       167 ~  167 (185)
T cd04179         167 L  167 (185)
T ss_pred             H
Confidence            6

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=81.65  E-value=40  Score=31.06  Aligned_cols=184  Identities=11%  Similarity=0.017  Sum_probs=90.9

Q ss_pred             EEEEECCCCCHHH----HHHHHHHhcc-CceEEEEecCCChhhHHHHHHHHhhCCC--EEEecccCCCCchhHHHHHHHH
Q psy14358         88 LVLIHSAPYNYDK----RRLIRNTWGT-RVSVYFFIGETDPSNQTRLDIESETYHD--IVQGRFWDSYRNLTYKHTMVFK  160 (381)
Q Consensus        88 li~V~S~p~~~~r----R~aIR~TWg~-~v~~~FvlG~~~~~~~~~L~~E~~~~~D--II~~df~DsY~NLt~Ktl~~lk  160 (381)
                      -|+|++.-+...-    +.+.++||.. .+.++++...++....+.+ ++...-.+  ++..+- +.  |. .|. .+++
T Consensus         4 sIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~-~~~~~~~~~~i~~~~~-~~--~~-G~~-~a~n   77 (241)
T cd06427           4 TILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAA-RALRLPSIFRVVVVPP-SQ--PR-TKP-KACN   77 (241)
T ss_pred             EEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHH-HHhccCCCeeEEEecC-CC--CC-chH-HHHH
Confidence            3556654432222    2233345543 4667777666533333333 33222112  222221 11  11 222 3566


Q ss_pred             HHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCce-EEEeeeecCCcceeccCCccccc--cc----ccc---
Q psy14358        161 WVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNL-LMCPIVWEKLPVLRTYRSKWRVS--FS----EYR---  230 (381)
Q Consensus       161 w~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l-~~G~~~~~~~~~~R~~~sKwyv~--~~----~yp---  230 (381)
                      ...++. +.+||+..|+|+.+..+.+.+.+.....  ...++ ..|+........ .+...+.+..  ..    ..+   
T Consensus        78 ~g~~~a-~gd~i~~~DaD~~~~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
T cd06427          78 YALAFA-RGEYVVIYDAEDAPDPDQLKKAVAAFAR--LDDKLACVQAPLNYYNAR-ENWLTRMFALEYAAWFDYLLPGLA  153 (241)
T ss_pred             HHHHhc-CCCEEEEEcCCCCCChHHHHHHHHHHHh--cCCCEEEEeCceEeeCCC-ccHHHHHHHHHHHHHHHHHHHHHH
Confidence            666665 6799999999999999988888876531  11232 222210110000 0000011000  00    001   


Q ss_pred             CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        231 DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       231 ~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                      ....+..++|++.++++++.+.+...    .+....||..+ ++=+...|.+....
T Consensus       154 ~~~~~~~~~g~~~~~rr~~~~~vgg~----~~~~~~eD~~l-~~rl~~~G~r~~~~  204 (241)
T cd06427         154 RLGLPIPLGGTSNHFRTDVLRELGGW----DPFNVTEDADL-GLRLARAGYRTGVL  204 (241)
T ss_pred             hcCCeeecCCchHHhhHHHHHHcCCC----CcccchhhHHH-HHHHHHCCceEEEe
Confidence            11233456788899999999887432    12234699999 77766667665543

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=80.69  E-value=73  Score=32.82  Aligned_cols=179  Identities=12%  Similarity=0.107  Sum_probs=96.2

Q ss_pred             cEEEEEECCCCCHHHHHHHHH----HhccCceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHH
Q psy14358         86 VYLVLIHSAPYNYDKRRLIRN----TWGTRVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKW  161 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aIR~----TWg~~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw  161 (381)
                      .+-|+|++.-+...-++.|+.    ++. +..++.+-..++++..+.+++..+++..+.......   |. .|. .+++.
T Consensus        76 ~vsViIP~yNE~~~i~~~l~sll~q~yp-~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~---n~-Gka-~AlN~  149 (444)
T PRK14583         76 LVSILVPCFNEGLNARETIHAALAQTYT-NIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAH---NQ-GKA-IALRM  149 (444)
T ss_pred             cEEEEEEeCCCHHHHHHHHHHHHcCCCC-CeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCC---CC-CHH-HHHHH
Confidence            455777777654433333332    222 455555444444444455555556666654433222   22 243 45666


Q ss_pred             HHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccC---CccccccccccC-------
Q psy14358        162 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYR---SKWRVSFSEYRD-------  231 (381)
Q Consensus       162 ~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~---sKwyv~~~~yp~-------  231 (381)
                      +.+++ +.+|++..|.|+.+..+.+.+.+...... ++-...-|..      ..++..   ++....  +|..       
T Consensus       150 gl~~a-~~d~iv~lDAD~~~~~d~L~~lv~~~~~~-~~~g~v~g~~------~~~~~~~~~~~~~~~--e~~~~~~~~~~  219 (444)
T PRK14583        150 GAAAA-RSEYLVCIDGDALLDKNAVPYLVAPLIAN-PRTGAVTGNP------RIRTRSTLIGRVQVG--EFSSIIGLIKR  219 (444)
T ss_pred             HHHhC-CCCEEEEECCCCCcCHHHHHHHHHHHHhC-CCeEEEEccc------eecCCCcchhhHHHH--HHHHHHHHHHH
Confidence            66665 78999999999999999888777654210 1212222211      112111   111110  0100       


Q ss_pred             --CCC-CC-ccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358        232 --HFY-PP-HCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK  285 (381)
Q Consensus       232 --~~y-P~-Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~  285 (381)
                        ..+ +. .++|.+..+.+++.+++--..    +..-.||..+ |+-+...|.+...
T Consensus       220 ~~~~~g~~~~~sG~~~~~rr~al~~vGg~~----~~~i~ED~dl-~~rl~~~G~~i~~  272 (444)
T PRK14583        220 TQRVYGQVFTVSGVVAAFRRRALADVGYWS----PDMITEDIDI-SWKLQLKHWSVFF  272 (444)
T ss_pred             HHHHhCCceEecCceeEEEHHHHHHcCCCC----CCcccccHHH-HHHHHHcCCeEEE
Confidence              111 22 357888999999887763222    2234699999 9988887876543

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=80.28  E-value=68  Score=32.21  Aligned_cols=191  Identities=9%  Similarity=-0.040  Sum_probs=109.1

Q ss_pred             cEEEEEECCCCCH-HHHHHHHHHhcc---CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHH
Q psy14358         86 VYLVLIHSAPYNY-DKRRLIRNTWGT---RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKW  161 (381)
Q Consensus        86 ~Lli~V~S~p~~~-~rR~aIR~TWg~---~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw  161 (381)
                      .+-|+|++.-+.. .-.+.++..=..   ...++.+...++++..+.+++-..++++.+.....   .+-...-..++.+
T Consensus        55 ~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~gK~~al~~  131 (439)
T COG1215          55 KVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYP---EKKNGGKAGALNN  131 (439)
T ss_pred             ceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEec---cccCccchHHHHH
Confidence            5667788877666 344455554444   35666666545445555666666666544433311   1112222456777


Q ss_pred             HHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCcccccc--------cccc-CC
Q psy14358        162 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSF--------SEYR-DH  232 (381)
Q Consensus       162 ~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~--------~~yp-~~  232 (381)
                      +.... +.++|+..|-|+.+..+.|.+.+.....+  ......|.....+.....+..++-..-+        .... ..
T Consensus       132 ~l~~~-~~d~V~~~DaD~~~~~d~l~~~~~~f~~~--~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  208 (439)
T COG1215         132 GLKRA-KGDVVVILDADTVPEPDALRELVSPFEDP--PVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKG  208 (439)
T ss_pred             HHhhc-CCCEEEEEcCCCCCChhHHHHHHhhhcCC--CeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhc
Confidence            77666 59999999999999999999998876421  1111222210000000000000000000        0001 12


Q ss_pred             CCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeecC
Q psy14358        233 FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKFS  287 (381)
Q Consensus       233 ~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~~  287 (381)
                      ....+|.|++.++.+++++.+.   .. .+..-.||..+ ++-+...|.+....+
T Consensus       209 g~~~~~~G~~~~~rr~aL~~~g---~~-~~~~i~ED~~l-t~~l~~~G~~~~~~~  258 (439)
T COG1215         209 GLISFLSGSSSAFRRSALEEVG---GW-LEDTITEDADL-TLRLHLRGYRVVYVP  258 (439)
T ss_pred             CCeEEEcceeeeEEHHHHHHhC---CC-CCCceeccHHH-HHHHHHCCCeEEEee
Confidence            2578899999999999998887   22 34455699998 888887777766544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	381
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	2e-07

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 50.5 bits (120), Expect = 2e-07
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 24/198 (12%)

Query: 96  YNYDKRRLIRNTWGTRVS--VYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTY 153
           ++  +  L+ +TW +R+    + F    D   Q RL      +  + Q     S+  L+ 
Sbjct: 25  FHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQERLGP----HLVVTQCSAEHSHPALSC 80

Query: 154 KHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLP 213
           K  M  ++  +    +++   +DDD ++N     + L + L        +         P
Sbjct: 81  K--MAAEFDAFLVSGLRWFCHVDDDNYVNP----KALLQLLKTFPQDRDVYVGKPSLNRP 134

Query: 214 VLRTYRSKWRVSFSEYRDHFYPPHCHGNALLYSPDVVFKLYQH------LQTDQEYFWVD 267
           +  +       S    +   +     G     +  +  K+         + T       D
Sbjct: 135 IHASELQ----SKQRTKLVRFWFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPD 190

Query: 268 DVFITGIVFSKLN--LTH 283
           D  +  I+  KL   L  
Sbjct: 191 DCTVGYIIECKLGGRLQP 208

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	381
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.94
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	93.28
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	92.6
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	89.81
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	88.78
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	85.79

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.94  E-value=4.1e-26  Score=219.85  Aligned_cols=195  Identities=15%  Similarity=0.138  Sum_probs=135.3

Q ss_pred             CCCCCcEEEEEECCCC-CHHHHHHHHHHhccC--ceEEEEecCCChhhHHHHHHHHhhCCCEEEecccC--CCCchhHHH
Q psy14358         81 PCLDTVYLVLIHSAPY-NYDKRRLIRNTWGTR--VSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWD--SYRNLTYKH  155 (381)
Q Consensus        81 ~C~~~~Lli~V~S~p~-~~~rR~aIR~TWg~~--v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~D--sY~NLt~Kt  155 (381)
                      .|..+.++|+|+|+++ +.+||.+||+||++.  ...+|+.+..+..++.    .  ..+++++.++.+  ++.+++.|+
T Consensus         9 ~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~l~~----~--~~~~~~~~~~~~~~~~~~l~~K~   82 (280)
T 2j0a_A            9 ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQE----R--LGPHLVVTQCSAEHSHPALSCKM   82 (280)
T ss_dssp             CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHHHHH----H--HGGGEEECCC-------CCCHHH
T ss_pred             CCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCcccccc----c--ccccceeccccccccccchHHHH
Confidence            4555589999999997 557889999999993  3333344433444322    1  245788887754  677899999


Q ss_pred             HHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCC
Q psy14358        156 TMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYP  235 (381)
Q Consensus       156 l~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP  235 (381)
                      ...+++..  +++++|++|+|||+||+++||+++|...++   .+++|+|.. .. ..++|.   ++++|.+.++...|+
T Consensus        83 ~~~~~~~l--~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~---~~~~YiG~~-~~-~~~~~~---~~~~~~~~~~~~~~~  152 (280)
T 2j0a_A           83 AAEFDAFL--VSGLRWFCHVDDDNYVNPKALLQLLKTFPQ---DRDVYVGKP-SL-NRPIHA---SELQSKQRTKLVRFW  152 (280)
T ss_dssp             HHHHHHHH--HHTCSEEEEEETTEEECHHHHHHHHTTSCT---TSCCEEECE-EC-----------------------CC
T ss_pred             HHHHHHHh--CCCCcEEEEeCCCcEEcHHHHHHHHHhCCC---CCCEEEEEe-cc-Cccccc---cccCccccccccccC
Confidence            99998664  368999999999999999999999998874   688999998 43 334442   455554444444554


Q ss_pred             Ccc-ccceEeeCHHHHHHHHHHhccCC-------CCCCccchhhHHhhHH-hCCCceeecCCCCCCCC
Q psy14358        236 PHC-HGNALLYSPDVVFKLYQHLQTDQ-------EYFWVDDVFITGIVFS-KLNLTHAKFSWWPGHDE  294 (381)
Q Consensus       236 ~Y~-~G~gYvLS~d~a~~l~~~~~~~~-------~~~~~EDV~vTGi~l~-~~gi~~~~~~~f~~~~~  294 (381)
                       || +|+||+||++++++|+..... .       .....||++| |+|++ ++||++++.++|+.+..
T Consensus       153 -y~~GGaG~vlSr~~l~~l~~~~~~-~~~~~~~~~~~~~dD~~l-G~Cl~~~lGV~~~~~~~Fh~~~~  217 (280)
T 2j0a_A          153 -FATGGAGFCINRQLALKMVPWASG-SHFVDTSALIRLPDDCTV-GYIIECKLGGRLQPSPLFHSHLE  217 (280)
T ss_dssp             -EECGGGCEEEEHHHHHHHHHHHTT-CTTSCCTTTTTSCHHHHH-HHHHHHTTCCCEEECTTCCCSSS
T ss_pred             -cccCCCEEEECHHHHHHHHHhhcc-cccccccccCCCCccHHH-HHHHHhcCCCCceecccccCCCc
Confidence             65 678999999999999986544 2       2345799999 99998 99999999999998764

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=93.28  E-value=1.8  Score=42.87  Aligned_cols=190  Identities=12%  Similarity=0.009  Sum_probs=99.6

Q ss_pred             cEEEEEECCCCC-HHHHHHH----HHHhcc-CceEEEEecCC-ChhhHHHHHHHHhhCC-CEEEecccCCCCchhHHHHH
Q psy14358         86 VYLVLIHSAPYN-YDKRRLI----RNTWGT-RVSVYFFIGET-DPSNQTRLDIESETYH-DIVQGRFWDSYRNLTYKHTM  157 (381)
Q Consensus        86 ~Lli~V~S~p~~-~~rR~aI----R~TWg~-~v~~~FvlG~~-~~~~~~~L~~E~~~~~-DII~~df~DsY~NLt~Ktl~  157 (381)
                      .+-|+|++.-+. ..-++.|    ++|... ...++.|-..+ +.+..+.+++-.+.+. .|..+...++. ++    -.
T Consensus        30 ~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~-G~----~~  104 (472)
T 1xhb_A           30 TTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRS-GL----IR  104 (472)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCC-CH----HH
T ss_pred             CeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCC-Ch----HH
Confidence            466777777655 3333333    333322 23555555444 4445556666556666 46555443322 22    23


Q ss_pred             HHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCcceeccC-------Ccccc----
Q psy14358        158 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLPVLRTYR-------SKWRV----  224 (381)
Q Consensus       158 ~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~~~R~~~-------sKwyv----  224 (381)
                      +.....++. +.+||+..|+|+.+..+-|...+.....   .+...++....  ..........       -.|..    
T Consensus       105 a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (472)
T 1xhb_A          105 ARLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH---DRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRW  180 (472)
T ss_dssp             HHHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH---CTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEE
T ss_pred             HHHHHHHhc-cCCeEEEECCCeEeCccHHHHHHHHHHh---CCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeec
Confidence            445555555 6899999999999987766665554321   12223332201  1110000000       01111    


Q ss_pred             ---ccccc-------cCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        225 ---SFSEY-------RDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       225 ---~~~~y-------p~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                         +....       ......+++.|+++++++++.+++-.-... ......||+-+ ++=+...|.+....
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~-~~~~g~ED~dl-~~R~~~~G~~i~~~  250 (472)
T 1xhb_A          181 YPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAG-MDIWGGENLEI-SFRIWQCGGTLEIV  250 (472)
T ss_dssp             EECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTT-SCTTCCCCSHH-HHHHHHTTCEEEEE
T ss_pred             ccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCc-ccccCchhHHH-HHHHHhcCCeEEEc
Confidence               10000       001223678899999999999887532222 22334799999 87777788766543

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=92.60  E-value=3  Score=37.05  Aligned_cols=182  Identities=7%  Similarity=-0.026  Sum_probs=92.8

Q ss_pred             EEEEEECCCCCHHHHHHHHHHhcc---CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCC-----CchhHHHHHH
Q psy14358         87 YLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSY-----RNLTYKHTMV  158 (381)
Q Consensus        87 Lli~V~S~p~~~~rR~aIR~TWg~---~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY-----~NLt~Ktl~~  158 (381)
                      +-|+|++.-....-+++|+.--.+   .+.++.+-..+.... ..+.++......|........-     .|..  .-.+
T Consensus         3 vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t-~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a   79 (255)
T 1qg8_A            3 VSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEET-LNVIRPFLNDNRVRFYQSDISGVKERTEKTR--YAAL   79 (255)
T ss_dssp             EEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHH-HHHHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHH
T ss_pred             EEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchH-HHHHHHHhhcCCEEEEecccccccccccccC--HHHH
Confidence            346666654333333333333222   456666555443333 3344444334555443332100     2321  3345


Q ss_pred             HHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeec--C--CcceeccCCccccccccccCCCC
Q psy14358        159 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWE--K--LPVLRTYRSKWRVSFSEYRDHFY  234 (381)
Q Consensus       159 lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~--~--~~~~R~~~sKwyv~~~~yp~~~y  234 (381)
                      ++.+.+++ +.+|++..|+|.++..+.|...+...... +.-.+..|.....  .  ..+..    .+..+..... ...
T Consensus        80 ~N~gi~~a-~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~  152 (255)
T 1qg8_A           80 INQAIEMA-EGEYITYATDDNIYMPDRLLKMVRELDTH-PEKAVIYSASKTYHLNENRDIVK----ETVRPAAQVT-WNA  152 (255)
T ss_dssp             HHHHHHHC-CCSEEEEEETTEEECTTHHHHHHHHHHHC-TTCCEEEEEEEEEEEC---CEEE----EEEECCCSCB-SCC
T ss_pred             HHHHHHHc-CCCEEEEeCCCCccChHHHHHHHHHHHhC-CCceEEEeceEEEEeCCCCcchh----hccCchHHHH-Hhh
Confidence            66667777 78999999999999877766666543210 1334555543111  1  01110    1111111111 134


Q ss_pred             CCccccceEeeCHHHHHHHH-HHh----ccCCCCCCccchhhHHhhHHhCC
Q psy14358        235 PPHCHGNALLYSPDVVFKLY-QHL----QTDQEYFWVDDVFITGIVFSKLN  280 (381)
Q Consensus       235 P~Y~~G~gYvLS~d~a~~l~-~~~----~~~~~~~~~EDV~vTGi~l~~~g  280 (381)
                      ..++.|++.++.+++.+++- .-.    .. ......||..+ .+-+...|
T Consensus       153 ~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~-~~~~~~eD~~~-~~r~~~~g  201 (255)
T 1qg8_A          153 PCAIDHCSVMHRYSVLEKVKEKFGSYWDES-PAFYRIGDARF-FWRVNHFY  201 (255)
T ss_dssp             TTTSCGGGEEEETHHHHHHHHHHSSSSCCC-GGGSTTHHHHH-HHHHTTTC
T ss_pred             cCCCccceEEEEHHHHHhhcccccccccCC-cccchHHHHHH-HHHHHHhC
Confidence            46678999999999999986 320    01 22456799988 55554434

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=89.81  E-value=4.2  Score=42.88  Aligned_cols=192  Identities=10%  Similarity=0.003  Sum_probs=97.7

Q ss_pred             cEEEEEECCCCCHHHHHHHHHHhcc-----CceEEEEecCC--ChhhHHHHHHHHhh-CCCEEEecccCCCCchhHHHHH
Q psy14358         86 VYLVLIHSAPYNYDKRRLIRNTWGT-----RVSVYFFIGET--DPSNQTRLDIESET-YHDIVQGRFWDSYRNLTYKHTM  157 (381)
Q Consensus        86 ~Lli~V~S~p~~~~rR~aIR~TWg~-----~v~~~FvlG~~--~~~~~~~L~~E~~~-~~DII~~df~DsY~NLt~Ktl~  157 (381)
                      .+-|+|++.-....-++.|..--.+     ...-+.|+...  +......+.+..+. ...|....- + -.+.+.=-=.
T Consensus       181 kVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~-~-N~G~a~a~N~  258 (657)
T 4fix_A          181 NIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQ-P-NLGGSGGYSR  258 (657)
T ss_dssp             CEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEEC-C-CCHHHHHHHH
T ss_pred             eEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEEC-C-CCCHHHHHHH
Confidence            6667777765433334444332222     23245566544  33222223332222 234544332 2 1122322334


Q ss_pred             HHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeec-CCc-cee------cc-CCcc------
Q psy14358        158 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWE-KLP-VLR------TY-RSKW------  222 (381)
Q Consensus       158 ~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~-~~~-~~R------~~-~sKw------  222 (381)
                      +++.+.... +++||+..|||+.+..+.|...+.....  ......+|..... ..+ .+.      +. ...|      
T Consensus       259 Gl~~A~g~~-~~dyIlfLD~D~~~~pd~L~~ll~~l~~--~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~  335 (657)
T 4fix_A          259 VMYEALKNT-DCQQILFMDDDIRLEPDSILRVLAMHRF--AKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHA  335 (657)
T ss_dssp             HHHHHHHHC-CCSEEEEECSSEEECTHHHHHHHHHHHH--BSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTC
T ss_pred             HHHHHHhcC-CCCEEEEECCCCccChhHHHHHHHHHHh--CCCcEEEEeEEecCCCCceeeecccEeccccccccccccc
Confidence            666666554 7899999999999998776666654321  0122344432121 111 000      00 0000      


Q ss_pred             -c--------c-----ccccccCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        223 -R--------V-----SFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       223 -y--------v-----~~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                       |        +     ....+.......|++|++.++.+++.+.+--  .. .-++..||+-+ ++=+.+.|.+....
T Consensus       336 ~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGg--fd-~~F~~~ED~Dl-~lR~~~~G~ki~~~  409 (657)
T 4fix_A          336 EYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQ--PL-PLFIKWDDADY-GLRAAEHGYPTVTL  409 (657)
T ss_dssp             CSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCS--CC-SCSSSSHHHHH-HHHHHHTTCCEEEE
T ss_pred             cccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCC--Ch-hHhccCcHHHH-HHHHHHcCCeEEEE
Confidence             0        0     0011122234568899999999999988642  11 22456799999 88777888775543

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=88.78  E-value=5.9  Score=40.66  Aligned_cols=190  Identities=13%  Similarity=0.049  Sum_probs=100.8

Q ss_pred             cEEEEEECCCCC-HHHH----HHHHHHhcc-CceEEEEecCC-ChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHH
Q psy14358         86 VYLVLIHSAPYN-YDKR----RLIRNTWGT-RVSVYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMV  158 (381)
Q Consensus        86 ~Lli~V~S~p~~-~~rR----~aIR~TWg~-~v~~~FvlG~~-~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~  158 (381)
                      .+-|+|++.-+. ..-+    .++++|... ...++.|-..+ +.++.+.|++..+.+..|..+...+. .++.    .+
T Consensus       113 ~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~----~A  187 (570)
T 2d7i_A          113 NTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLI----RT  187 (570)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHH----HH
T ss_pred             CeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHH----HH
Confidence            456778887665 2222    344445433 23566555444 54435666666666766655544332 2332    33


Q ss_pred             HHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCc-ceecc--C-----Cccccccc-
Q psy14358        159 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLP-VLRTY--R-----SKWRVSFS-  227 (381)
Q Consensus       159 lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~-~~R~~--~-----sKwyv~~~-  227 (381)
                      .....++. +.+||+..|+|+.+..+-|...+.....   .....+|....  .... ..+..  .     -.|..... 
T Consensus       188 ~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~~l~~---~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (570)
T 2d7i_A          188 RMLGASVA-TGDVITFLDSHCEANVNWLPPLLDRIAR---NRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKR  263 (570)
T ss_dssp             HHHHHHHC-CSSEEEECCSSEEECTTCSHHHHHHHHH---CTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEE
T ss_pred             HHHHHHhc-CCCEEEEEcCCccccccHHHHHHHHHHh---CCCEEEeeeeeccCCCchhhccccCCcccccccccccccc
Confidence            44445555 6899999999999987655555443311   12334443211  1100 00100  0     01111000 


Q ss_pred             -------ccc---CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        228 -------EYR---DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       228 -------~yp---~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                             .+.   ...-.+++.|++.++++++.+.+-.-... ......||+-+ .+=+...|.+....
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~-~~~~g~ED~dl-~~Rl~~~G~~i~~~  330 (570)
T 2d7i_A          264 IPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPG-LEIWGGEQYEI-SFKVWMCGGRMEDI  330 (570)
T ss_dssp             ECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTT-CCSSSSHHHHH-HHHHHHTTCEEEEE
T ss_pred             cccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCc-ccccCcchHHH-HHHHHhCCCeEEEc
Confidence                   010   01123567899999999999887432222 22333799999 77777788776544

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=85.79  E-value=9.7  Score=38.04  Aligned_cols=186  Identities=12%  Similarity=0.007  Sum_probs=96.3

Q ss_pred             cEEEEEECCCCCH-HHH----HHHHHHhcc-CceEEEEecCC-ChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHH
Q psy14358         86 VYLVLIHSAPYNY-DKR----RLIRNTWGT-RVSVYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMV  158 (381)
Q Consensus        86 ~Lli~V~S~p~~~-~rR----~aIR~TWg~-~v~~~FvlG~~-~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~  158 (381)
                      .+-|+|++.-+.. .-+    .++++|... ...+++|-..+ +.+...    ..+.+..|..+...+   |.-  .-.+
T Consensus        67 ~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~----~~~~~~~v~vi~~~~---n~G--~~~A  137 (501)
T 2ffu_A           67 ATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGA----LLGKIEKVRVLRNDR---REG--LMRS  137 (501)
T ss_dssp             CEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHH----GGGGBTTEEEEECSS---CCH--HHHH
T ss_pred             CEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHH----HHhcCCCEEEEECCC---CcC--HHHH
Confidence            4557777776543 222    334444433 24666665444 443322    233455665544333   221  2345


Q ss_pred             HHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCcc--------eecc-----CCccc
Q psy14358        159 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLPV--------LRTY-----RSKWR  223 (381)
Q Consensus       159 lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~~--------~R~~-----~sKwy  223 (381)
                      .....++. +.+||+..|+|..+..+-|...+.....   .+...+|....  .....        .+..     ..+|.
T Consensus       138 ~N~G~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~---~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (501)
T 2ffu_A          138 RVRGADAA-QAKVLTFLDSHCECNEHWLEPLLERVAE---DRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWD  213 (501)
T ss_dssp             HHHHHHHC-CSSEEEECCSSEEECTTCHHHHHHHHHH---CTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEE
T ss_pred             HHHHHHhc-CCCEEEEECCCcccCccHHHHHHHHHHh---CCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccc
Confidence            55555666 7899999999999987766665554321   11223333211  00000        0000     00110


Q ss_pred             -ccccc------cc-CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        224 -VSFSE------YR-DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       224 -v~~~~------yp-~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                       ++...      -+ .....+++.|++.++++++.+.+-.-... ......||+-+ .+=+...|.+....
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~-~~~~g~ED~dl-~~Rl~~~G~~i~~~  282 (501)
T 2ffu_A          214 YMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMM-MDVWGGENLEI-SFRVWQCGGSLEII  282 (501)
T ss_dssp             ECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTT-CCSSSSHHHHH-HHHHHHTTCEEEEE
T ss_pred             cCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCcc-ccccCcchHHH-HHHHHhcCCeEEEc
Confidence             11000      00 01123577899999999999887533222 33334899999 77677778766544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	381
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	89.78

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.78  E-value=2.4  Score=37.26  Aligned_cols=190  Identities=13%  Similarity=-0.024  Sum_probs=94.0

Q ss_pred             EEEEEECCCCCHH-HHH----HHHHHhccC-ceEEEEecCC-ChhhHHHHHHHHhhCCCEE-EecccCCCCchhHHHHHH
Q psy14358         87 YLVLIHSAPYNYD-KRR----LIRNTWGTR-VSVYFFIGET-DPSNQTRLDIESETYHDIV-QGRFWDSYRNLTYKHTMV  158 (381)
Q Consensus        87 Lli~V~S~p~~~~-rR~----aIR~TWg~~-v~~~FvlG~~-~~~~~~~L~~E~~~~~DII-~~df~DsY~NLt~Ktl~~  158 (381)
                      +=|+|++.-+... -.+    ++.+|-... ..++.|=..+ +....+.+++-.+++.+-+ .....+ -.+.+    .+
T Consensus        24 vSIIIp~yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~-n~G~~----~a   98 (328)
T d1xhba2          24 TSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQ-RSGLI----RA   98 (328)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSS-CCCHH----HH
T ss_pred             EEEEEeccCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecc-cccch----HH
Confidence            4477777753322 222    222332222 2454443333 5545555555455555533 333222 12222    24


Q ss_pred             HHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeee-ec--------CCcceecc-----CCccc-
Q psy14358        159 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIV-WE--------KLPVLRTY-----RSKWR-  223 (381)
Q Consensus       159 lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~-~~--------~~~~~R~~-----~sKwy-  223 (381)
                      .+...+++ +.+||+..|+|+.+..+-|...+.....  .......|... ..        +....+..     ...|. 
T Consensus        99 ~N~Gi~~a-~gd~i~flD~D~~~~p~~l~~l~~~~~~--~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (328)
T d1xhba2          99 RLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH--DRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYP  175 (328)
T ss_dssp             HHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH--CTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEE
T ss_pred             HHHHHHhh-hcceeeecCcccccChhHHHHHHHHHhc--CCCeEEecceeeeccCceeeccCCccccccccccccccccc
Confidence            56666666 7899999999999987655554443211  01222222220 00        00111100     00111 


Q ss_pred             ccccc-------ccCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358        224 VSFSE-------YRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF  286 (381)
Q Consensus       224 v~~~~-------yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~  286 (381)
                      ++...       ......-+++.|+++++++++.+.+-.--.. ......||+-+ ++=+.+.|......
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~-~~~~g~ED~Dl-~~R~~~~G~~i~~~  243 (328)
T d1xhba2         176 VPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAG-MDIWGGENLEI-SFRIWQCGGTLEIV  243 (328)
T ss_dssp             CCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTT-SCTTCCCCSHH-HHHHHHTTCEEEEE
T ss_pred             cchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCC-CcCcCchHHHH-HHHHHHhCCeEEEe
Confidence            11100       0111123567899999999999886432222 22334799999 77777788776544