Psyllid ID: psy14406
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 275 | 2.2.26 [Sep-21-2011] | |||||||
| O35459 | 327 | Delta(3,5)-Delta(2,4)-die | yes | N/A | 0.738 | 0.620 | 0.543 | 8e-64 | |
| Q62651 | 327 | Delta(3,5)-Delta(2,4)-die | yes | N/A | 0.738 | 0.620 | 0.552 | 1e-63 | |
| Q13011 | 328 | Delta(3,5)-Delta(2,4)-die | yes | N/A | 0.745 | 0.625 | 0.580 | 2e-63 | |
| Q5RFG0 | 328 | Delta(3,5)-Delta(2,4)-die | yes | N/A | 0.745 | 0.625 | 0.576 | 5e-63 | |
| Q54SS0 | 293 | Delta(3,5)-Delta(2,4)-die | yes | N/A | 0.738 | 0.692 | 0.364 | 5e-34 | |
| A9MR28 | 261 | Carnitinyl-CoA dehydratas | N/A | N/A | 0.698 | 0.735 | 0.326 | 2e-19 | |
| P52046 | 261 | 3-hydroxybutyryl-CoA dehy | yes | N/A | 0.650 | 0.685 | 0.360 | 5e-19 | |
| Q7U004 | 285 | Probable enoyl-CoA hydrat | no | N/A | 0.72 | 0.694 | 0.349 | 6e-19 | |
| O53163 | 285 | Probable enoyl-CoA hydrat | no | N/A | 0.72 | 0.694 | 0.349 | 8e-19 | |
| A8ALR7 | 261 | Carnitinyl-CoA dehydratas | yes | N/A | 0.701 | 0.739 | 0.301 | 1e-18 |
| >sp|O35459|ECH1_MOUSE Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 243 bits (621), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 161/208 (77%), Gaps = 5/208 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S E+ + +D AR + LR
Sbjct: 87 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMAS---ELMQPSGDDAARIAWYLRD 143
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
LI+ YQK+ + +E+CPKPVI+A+HG CIGGG+ L++A DIRY T+DA+F +KEVD+GL A
Sbjct: 144 LISKYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLVSACDIRYCTQDAFFQIKEVDMGLAA 203
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGNQSLVNE+ F+ARK+ A EA + GLVS+++ DK+++L A L I
Sbjct: 204 DVGTLQRLPKVIGNQSLVNELTFSARKMMADEALDSGLVSRVFQDKDAMLNAAFALAADI 263
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
+SKSPVAVQG+K L++SRDH+V+E L+
Sbjct: 264 SSKSPVAVQGSKINLIYSRDHSVDESLD 291
|
Isomerization of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA. Mus musculus (taxid: 10090) EC: 5EC: .EC: 3EC: .EC: 3EC: .EC: - |
| >sp|Q62651|ECH1_RAT Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus GN=Ech1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 243 bits (620), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 161/208 (77%), Gaps = 5/208 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S +I + +DVAR + LR
Sbjct: 87 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMAS---DILQPPGDDVARIAWYLRD 143
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
LI+ YQK+ + +E+CPKPVI+A+HG CIGGG+ LI+A DIRY T+DA+F +KEVD+GL A
Sbjct: 144 LISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAA 203
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGN+SLVNE+ FTARK+ A EA + GLVS+++ DK+ +L A L I
Sbjct: 204 DVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADI 263
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
+SKSPVAVQG+K L++SRDH+V+E L+
Sbjct: 264 SSKSPVAVQGSKINLIYSRDHSVDESLD 291
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Isomerization of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA. Rattus norvegicus (taxid: 10116) EC: 5 EC: . EC: 3 EC: . EC: 3 EC: . EC: - |
| >sp|Q13011|ECH1_HUMAN Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens GN=ECH1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 160/210 (76%), Gaps = 5/210 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF+ +S + +CR +++S AGK+FTAG+DL M S +I + +DVAR S LR
Sbjct: 88 EMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMAS---DILQPKGDDVARISWYLRD 144
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+IT YQ++ + +ERCPKPVI+AVHG CIGGG+ L+TA DIRY +DA+F +KEVD+GL A
Sbjct: 145 IITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAA 204
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGNQSLVNE+AFTARK+ A EA GLVS+++ DKE +L A+ L I
Sbjct: 205 DVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEI 264
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+SKSPVAVQ TK L++SRDH+V E LN V
Sbjct: 265 SSKSPVAVQSTKVNLLYSRDHSVAESLNYV 294
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Isomerization of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA. Homo sapiens (taxid: 9606) EC: 5 EC: . EC: 3 EC: . EC: 3 EC: . EC: - |
| >sp|Q5RFG0|ECH1_PONAB Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo abelii GN=ECH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (614), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 160/210 (76%), Gaps = 5/210 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF+ +S + +CR +++S AGK+FTAG+DL M S +I + +DVAR S LR
Sbjct: 88 EMVECFNKISRDADCRAVVISGAGKMFTAGVDLMDMAS---DILQPKGDDVARISWYLRD 144
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+IT YQ++ + +E+CPKPVI+AVHG CIGGG+ L+TA DIRY +DA+F +KEVD+GL A
Sbjct: 145 IITRYQETFNVIEKCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAA 204
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGNQSLVNE+AFTARK+ A EA GLVS+++ DKE +L A+ L I
Sbjct: 205 DVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEI 264
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+SKSPVAVQ TK L++SRDH+V E LN V
Sbjct: 265 SSKSPVAVQSTKVNLLYSRDHSVAESLNYV 294
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Isomerization of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA. Pongo abelii (taxid: 9601) EC: 5 EC: . EC: 3 EC: . EC: 3 EC: . EC: - |
| >sp|Q54SS0|ECH1_DICDI Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 8/211 (3%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSL---GQEIAEQEDVARKSKILR 57
E +D + + + R +IL GK TAGL+L + L E+++ ++ K++R
Sbjct: 56 EFISIYDEIQNDSKIRCVILRGEGKGLTAGLNLGKIAPLITGDSEVSQSQNNLDLFKMIR 115
Query: 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT 117
+ +Q S+ + +C KP I+ +HGACIGGG+ +ITA DIR + DA F+++E + +
Sbjct: 116 R----WQASLDKINKCSKPTIALIHGACIGGGVDMITACDIRLCSSDAKFSIRETKLSII 171
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
AD+G LQR+ +I+G+ E+A T + I+A A LV+ +Y D ++LL+ +L
Sbjct: 172 ADLGTLQRISKIVGS-GFARELALTGKDIDAKTAERFNLVNHVYPDHDTLLSEGRKLALS 230
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
IA SP+ VQ TK TL + DH ++EGL +V
Sbjct: 231 IAQNSPLVVQATKLTLNHADDHTIDEGLYRV 261
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Isomerization of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA. Dictyostelium discoideum (taxid: 44689) EC: 5 EC: . EC: 3 EC: . EC: 3 EC: . EC: - |
| >sp|A9MR28|CAID_SALAR Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F S ++ RV I++ AG K F+AG DL E D L
Sbjct: 34 MGEAFLSFRDDPHLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + KPVI+AV+G GGG L AAD A F L E +G+ D
Sbjct: 89 ELFDLN--------KPVIAAVNGYAFGGGFELALAADFIICADHASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+I+ ++VN++ T R++ A EA G+V+++ E LL A EL +
Sbjct: 141 GGVLRLPKIL-PPAIVNDMVMTGRRMTAEEALRWGVVNRVVSPHE-LLDSARELARQLVQ 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+AV K+ +RD +VEEG +
Sbjct: 199 SAPLAVAALKEITRTTRDMSVEEGYRYI 226
|
Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) (taxid: 41514) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=crt PE=3 SV=1 | Back alignment and function description |
|---|
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 15/194 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ + + E +IL+ AG K F AG D+S M +E+ E RK IL
Sbjct: 35 EMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEM----KEMNTIE--GRKFGIL--- 85
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
K LE KPVI+AV+G +GGG + + DIR A+ +A F EV +G+T
Sbjct: 86 ---GNKVFRRLELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPG 142
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G QRL R++G + ++ FTA+ I+A EA GLV+K+ + E L+ A E+ I
Sbjct: 143 FGGTQRLSRLVG-MGMAKQLIFTAQNIKADEALRIGLVNKVVEPSE-LMNTAKEIANKIV 200
Query: 180 SKSPVAVQGTKKTL 193
S +PVAV+ +K+ +
Sbjct: 201 SNAPVAVKLSKQAI 214
|
Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (taxid: 272562) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 5 |
| >sp|Q7U004|ECH12_MYCBO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=echA12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E +S + RV++L+ AG+ F++G D + E++ R + LR +
Sbjct: 53 EALAQVSYDNSVRVVVLTGAGRGFSSGADHKS----AGVVPHVENLTRPTYALRSM-ELL 107
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGA 122
I L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ GLTA ++G
Sbjct: 108 DDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGL 167
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
LPR IG+ S EI T R + A EA GLVS+ D E LL + +A S
Sbjct: 168 SYLLPRAIGS-SRAFEIMLTGRDVSAEEAERIGLVSRQVPD-EQLLDACYAIAARMAGFS 225
Query: 183 PVAVQGTKKTLVFSRD------HAVEEGLNQV 208
++ TK+TL D H EGL Q+
Sbjct: 226 RPGIELTKRTLWSGLDAASLEAHMQAEGLGQL 257
|
Could possibly oxidize fatty acids using specific components. Mycobacterium bovis (taxid: 1765) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|O53163|ECH12_MYCTU Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis GN=echA12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 94.4 bits (233), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E +S + RV++L+ AG+ F+ G D + E++ R + LR +
Sbjct: 53 EALAQVSYDNSVRVVVLTGAGRGFSPGADHKS----AGVVPHVENLTRPTYALRSM-ELL 107
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGA 122
I L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ GLTA ++G
Sbjct: 108 DDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGL 167
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
LPR IG+ S EI T R + A EA GLVS+ D E LL + +A S
Sbjct: 168 SYLLPRAIGS-SRAFEIMLTGRDVSAEEAERIGLVSRQVPD-EQLLDACYAIAARMAGFS 225
Query: 183 PVAVQGTKKTLVFSRD------HAVEEGLNQV 208
++ TK+TL D H EGL Q+
Sbjct: 226 RPGIELTKRTLWSGLDAASLEAHMQAEGLGQL 257
|
Could possibly oxidize fatty acids using specific components. Mycobacterium tuberculosis (taxid: 1773) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|A8ALR7|CAID_CITK8 Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+++ ++VNE+ T R+++A EA G+V+++ +++L+ A EL + +
Sbjct: 140 SGGVLRLPKLL-PPAIVNEMLMTGRRMDAEEALRWGIVNRVV-SQQALMDSARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEEG +
Sbjct: 198 NSAPLAIAALKEIYRATSEMPVEEGYRYI 226
|
Catalyzes the reversible dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA. Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) (taxid: 290338) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 275 | ||||||
| 189235851 | 279 | PREDICTED: similar to GA21887-PA [Tribol | 0.756 | 0.745 | 0.634 | 2e-74 | |
| 242008283 | 290 | delta3,5-delta2,4-dienoyl-CoA isomerase, | 0.756 | 0.717 | 0.641 | 2e-74 | |
| 195345905 | 312 | GM23012 [Drosophila sechellia] gi|194134 | 0.854 | 0.753 | 0.578 | 2e-72 | |
| 195479585 | 314 | GE15891 [Drosophila yakuba] gi|194188468 | 0.854 | 0.748 | 0.574 | 3e-72 | |
| 91093258 | 274 | PREDICTED: similar to GA21887-PA [Tribol | 0.756 | 0.759 | 0.605 | 7e-72 | |
| 270016807 | 278 | hypothetical protein TcasGA2_TC001523 [T | 0.756 | 0.748 | 0.605 | 9e-72 | |
| 194893335 | 314 | GG19273 [Drosophila erecta] gi|190649505 | 0.854 | 0.748 | 0.570 | 1e-71 | |
| 383863558 | 304 | PREDICTED: delta(3,5)-Delta(2,4)-dienoyl | 0.756 | 0.684 | 0.596 | 4e-71 | |
| 195134272 | 310 | GI11030 [Drosophila mojavensis] gi|19390 | 0.756 | 0.670 | 0.615 | 1e-70 | |
| 194762832 | 318 | GF20237 [Drosophila ananassae] gi|190629 | 0.854 | 0.738 | 0.548 | 2e-70 |
| >gi|189235851|ref|XP_968046.2| PREDICTED: similar to GA21887-PA [Tribolium castaneum] gi|270004519|gb|EFA00967.1| hypothetical protein TcasGA2_TC003878 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/208 (63%), Positives = 173/208 (83%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+IG+CF++L+ +E CRVI+LS AGKIFTAGLD ML+L ++AEQEDVARKSKIL +LI
Sbjct: 40 DIGQCFENLNTDENCRVIVLSGAGKIFTAGLDFQDMLTLAPQLAEQEDVARKSKILYQLI 99
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
TTYQKSIS+LE C KP+++A+H AC+GGG+ LI AAD+RY TKD+WF +KEVDIG+ ADV
Sbjct: 100 TTYQKSISALELCKKPILAAIHLACVGGGVDLIAAADMRYCTKDSWFQVKEVDIGMAADV 159
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP+IIG+ SLV E+ +TARK+ AAEA GLVS++++DK S++ G I + + I+
Sbjct: 160 GTLQRLPKIIGSDSLVRELCYTARKMPAAEALGSGLVSRVFEDKASMIEGVIGIAKEISK 219
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPVAVQGTK +LV+SRDH V+EGL+ +
Sbjct: 220 KSPVAVQGTKVSLVYSRDHTVQEGLDHI 247
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242008283|ref|XP_002424936.1| delta3,5-delta2,4-dienoyl-CoA isomerase, putative [Pediculus humanus corporis] gi|212508550|gb|EEB12198.1| delta3,5-delta2,4-dienoyl-CoA isomerase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
EIGECF++LS N +CRVIILS G K+FTAG+DL M+SLG E+++ ED+ARKSKIL L
Sbjct: 50 EIGECFNNLSSNPDCRVIILSGKGPKLFTAGIDLHDMISLGAELSQHEDIARKSKILWGL 109
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
I TYQ SISSLE+C KPVI AVHG CIGGG++LI A DIRY T DAWF KE+DIG+ AD
Sbjct: 110 IKTYQTSISSLEKCHKPVIGAVHGPCIGGGLNLICATDIRYCTSDAWFQNKEIDIGMAAD 169
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
VG LQR+P+IIG+ SLVNE+A+T RK A+EA+E G VSK++D KES++ +++L E IA
Sbjct: 170 VGTLQRMPKIIGSTSLVNELAYTCRKFPASEAKESGFVSKIFDSKESMIEASLKLAETIA 229
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPVAVQ TK++L++SRDH V+EGL +
Sbjct: 230 QKSPVAVQVTKRSLIYSRDHTVDEGLENI 258
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195345905|ref|XP_002039509.1| GM23012 [Drosophila sechellia] gi|194134735|gb|EDW56251.1| GM23012 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/235 (57%), Positives = 175/235 (74%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI ECFD L+ N +CR I+LSAAGK FTAG+DL+ M++LGQ +AE +D ARK I+ ++I
Sbjct: 73 EIKECFDGLATNPDCRAIVLSAAGKHFTAGIDLNDMMNLGQTLAETDDYARKGVIMERMI 132
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ SISSLE CPKPVI+AVH ACIG G+ LITAADIRY T+DA+F +KEVDIG+ ADV
Sbjct: 133 KVYQDSISSLEHCPKPVITAVHKACIGAGVDLITAADIRYCTEDAFFQVKEVDIGMAADV 192
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP+ +G+QSL E+ FT RK EAAEA GLVS+L+ DKESLL GA+ + ELIAS
Sbjct: 193 GTLQRLPKAVGSQSLARELCFTGRKFEAAEAHSSGLVSRLFPDKESLLTGALAVAELIAS 252
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235
KSPVAV+ TK++LV+S +H +EGL+ + +K + + V+ + D P
Sbjct: 253 KSPVAVKTTKESLVYSLEHTNQEGLDHILLLNKLNLLSEDFAQAVAAQLTKDDKP 307
|
Source: Drosophila sechellia Species: Drosophila sechellia Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195479585|ref|XP_002100944.1| GE15891 [Drosophila yakuba] gi|194188468|gb|EDX02052.1| GE15891 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/235 (57%), Positives = 175/235 (74%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI ECFD L+ N +CR I+LSAAGK FTAG+DL+ M++LGQ +AE +D ARK I+ ++I
Sbjct: 75 EIKECFDGLATNPDCRAIVLSAAGKHFTAGIDLNDMMNLGQTLAETDDYARKGVIMERMI 134
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ SISSLE CPKPVI+AVH ACIG G+ LITAADIRY T+DA+F +KEVDIG+ ADV
Sbjct: 135 KVYQDSISSLEHCPKPVITAVHKACIGAGVDLITAADIRYCTEDAFFQVKEVDIGMAADV 194
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP+ +G+QSL E+ +T RK EAAEA GLVS+L+ DKESLL GA+ + ELIAS
Sbjct: 195 GTLQRLPKAVGSQSLARELCYTGRKFEAAEAHSAGLVSRLFPDKESLLTGALAVAELIAS 254
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235
KSPVAV+ TK++LV+S +H +EGL+ + +K + + V+ + D P
Sbjct: 255 KSPVAVKTTKESLVYSLEHTNQEGLDHILLLNKLNLLSEDFAQAVAAQLTKDDKP 309
|
Source: Drosophila yakuba Species: Drosophila yakuba Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91093258|ref|XP_970695.1| PREDICTED: similar to GA21887-PA [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 168/208 (80%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI +CF++L+ +E CR I+LSAAGKIFT GLD ++ +G ++A+ D+ARK+KIL + +
Sbjct: 39 EIKKCFETLNTDENCRAIVLSAAGKIFTCGLDFQQVMQVGPQLAQMSDIARKAKILYQFV 98
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T YQ S+SSLE C KPV++AVH ACIGGG +LITAAD+RY TKDA+F LKEVDIG+ ADV
Sbjct: 99 TNYQNSVSSLELCRKPVLAAVHSACIGGGFNLITAADMRYCTKDAFFQLKEVDIGMAADV 158
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GALQRLP+++G+ SLV E+A+TARK+ A+EA GLVSK++DDK+ ++ G + + IAS
Sbjct: 159 GALQRLPKVVGSDSLVRELAYTARKMPASEALSSGLVSKVFDDKDGMIEGVVGIAAEIAS 218
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPVAVQGTK LV+SRDH V+EGL+ +
Sbjct: 219 KSPVAVQGTKFNLVYSRDHTVQEGLDHI 246
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270016807|gb|EFA13253.1| hypothetical protein TcasGA2_TC001523 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 168/208 (80%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI +CF++L+ +E CR I+LSAAGKIFT GLD ++ +G ++A+ D+ARK+KIL + +
Sbjct: 39 EIKKCFETLNTDENCRAIVLSAAGKIFTCGLDFQQVMQVGPQLAQMSDIARKAKILYQFV 98
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T YQ S+SSLE C KPV++AVH ACIGGG +LITAAD+RY TKDA+F LKEVDIG+ ADV
Sbjct: 99 TNYQNSVSSLELCRKPVLAAVHSACIGGGFNLITAADMRYCTKDAFFQLKEVDIGMAADV 158
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GALQRLP+++G+ SLV E+A+TARK+ A+EA GLVSK++DDK+ ++ G + + IAS
Sbjct: 159 GALQRLPKVVGSDSLVRELAYTARKMPASEALSSGLVSKVFDDKDGMIEGVVGIAAEIAS 218
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPVAVQGTK LV+SRDH V+EGL+ +
Sbjct: 219 KSPVAVQGTKFNLVYSRDHTVQEGLDHI 246
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194893335|ref|XP_001977856.1| GG19273 [Drosophila erecta] gi|190649505|gb|EDV46783.1| GG19273 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/235 (57%), Positives = 175/235 (74%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI ECFD L+ N +CR I+LSAAGK FTAG+DL+ M++LGQ ++E +D ARK I+ ++I
Sbjct: 75 EIKECFDGLATNPDCRAIVLSAAGKHFTAGIDLNDMMNLGQTLSETDDYARKGVIMERVI 134
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ SISSLERCPKPVI+AVH ACIG G+ LITAADIRY T+DA+F +KEVDIG+ ADV
Sbjct: 135 KVYQDSISSLERCPKPVITAVHKACIGAGVDLITAADIRYCTEDAFFQVKEVDIGMAADV 194
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP+ +G+QSL E+ +T RK EA EA GLVS+L+ DKESLL GA+ + ELIAS
Sbjct: 195 GTLQRLPKAVGSQSLARELCYTGRKFEAVEAHSSGLVSRLFPDKESLLTGALAVAELIAS 254
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235
KSPVAV+ TK++LV+S +H +EGL+ + +K + + V+ + D P
Sbjct: 255 KSPVAVKTTKESLVYSLEHTNQEGLDHILLLNKLNLLSEDFAQAVAAQLTKDDKP 309
|
Source: Drosophila erecta Species: Drosophila erecta Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383863558|ref|XP_003707247.1| PREDICTED: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 165/208 (79%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E CFD L+ ECRVI+LSAAGKIF AG+DL M++LGQ++ E +DVARK K+L++ I
Sbjct: 66 EFKLCFDELAVEPECRVIVLSAAGKIFCAGIDLQDMMNLGQQLVEHDDVARKCKVLQQKI 125
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ S +++E+CPKPVI+AVH ACIG G+ +I+AADIRY T DAWF +KEVDIGL ADV
Sbjct: 126 KGYQDSFTAIEKCPKPVIAAVHNACIGAGIDMISAADIRYCTSDAWFQIKEVDIGLAADV 185
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQR P+IIG+ SL E+ +TARK ++EA +CG +S+L+D++ESLL +++L E IAS
Sbjct: 186 GTLQRFPKIIGSDSLARELVYTARKFTSSEALQCGFISRLFDNQESLLENSMKLAEEIAS 245
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPVAVQG+K LV+SRDH+V+E L+ +
Sbjct: 246 KSPVAVQGSKINLVYSRDHSVQESLDYI 273
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195134272|ref|XP_002011561.1| GI11030 [Drosophila mojavensis] gi|193906684|gb|EDW05551.1| GI11030 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 168/208 (80%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI CF++L+ N +CR I+LSAAGK F AG+DLS M++LGQ++A+ +DVARK +L + I
Sbjct: 71 EIRACFETLAVNPDCRAIVLSAAGKHFCAGIDLSSMMALGQQLADYDDVARKGVVLERTI 130
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ SI+++E CPKPVI AVH ACIG G+ LITAADIRY+T+DA+F +KEVDIG+ ADV
Sbjct: 131 KIYQDSITAVELCPKPVIMAVHQACIGAGVDLITAADIRYSTQDAFFQVKEVDIGMAADV 190
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G+LQRLP+ IG+QSL E+ FT R+ E+AEA CGLVS++Y DKESLLAGAI L E IAS
Sbjct: 191 GSLQRLPKAIGSQSLARELCFTGRRFESAEAERCGLVSRVYPDKESLLAGAIALAEEIAS 250
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSP+AVQ TK+++V+S +H +EGL+ +
Sbjct: 251 KSPIAVQTTKESMVYSLEHTNQEGLDHI 278
|
Source: Drosophila mojavensis Species: Drosophila mojavensis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194762832|ref|XP_001963538.1| GF20237 [Drosophila ananassae] gi|190629197|gb|EDV44614.1| GF20237 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/235 (54%), Positives = 176/235 (74%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI ECF+ LS N +CR I++SAAGK FTAG+DL+ M++LGQ++AE +DVARK I+ +LI
Sbjct: 79 EIKECFEGLSTNPDCRAIVVSAAGKHFTAGIDLNDMMNLGQQLAETDDVARKGVIMERLI 138
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ SIS+LERCPKPVI+AVH ACIG G+ LIT+ADIRY T+DA+F +KEV+IG+ ADV
Sbjct: 139 RLYQDSISTLERCPKPVITAVHKACIGAGVDLITSADIRYCTEDAYFQVKEVEIGMAADV 198
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP+ +G+QSL E+ FT R+ EAAEA GLVS+++ DKESLL+GA+ L E IA
Sbjct: 199 GTLQRLPKAVGSQSLARELCFTGRRFEAAEAHSSGLVSRVFPDKESLLSGALALAENIAG 258
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235
KSP+AVQ TK+++ +S +H ++GL+ + +K + + V+ + D P
Sbjct: 259 KSPIAVQTTKESMTYSLEHTNQQGLDHIRTINKLNLQSEDFAQAVAAQLTKDDKP 313
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 275 | ||||||
| FB|FBgn0031092 | 312 | CG9577 [Drosophila melanogaste | 0.756 | 0.666 | 0.615 | 5.8e-66 | |
| ZFIN|ZDB-GENE-041010-170 | 313 | ech1 "enoyl CoA hydratase 1, p | 0.752 | 0.661 | 0.580 | 6.9e-63 | |
| UNIPROTKB|Q13011 | 328 | ECH1 "Delta(3,5)-Delta(2,4)-di | 0.745 | 0.625 | 0.580 | 5e-60 | |
| UNIPROTKB|E2R921 | 352 | ECH1 "Uncharacterized protein" | 0.738 | 0.576 | 0.581 | 5.7e-59 | |
| UNIPROTKB|F6PRB5 | 328 | ECH1 "Uncharacterized protein" | 0.810 | 0.679 | 0.535 | 2.5e-58 | |
| RGD|69353 | 327 | Ech1 "enoyl CoA hydratase 1, p | 0.738 | 0.620 | 0.552 | 3.2e-58 | |
| MGI|MGI:1858208 | 327 | Ech1 "enoyl coenzyme A hydrata | 0.745 | 0.626 | 0.543 | 4e-58 | |
| WB|WBGene00021296 | 297 | Y25C1A.13 [Caenorhabditis eleg | 0.749 | 0.693 | 0.461 | 1.5e-49 | |
| WB|WBGene00019022 | 278 | F58A6.1 [Caenorhabditis elegan | 0.749 | 0.741 | 0.475 | 4.1e-49 | |
| TAIR|locus:2169258 | 278 | DCI1 ""delta(3,5),delta(2,4)-d | 0.832 | 0.823 | 0.443 | 5.4e-47 |
| FB|FBgn0031092 CG9577 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 128/208 (61%), Positives = 165/208 (79%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI ECFD L+ N +CR I+LSA+GK FTAG+DL+ M+++GQ +AE +D ARK + ++I
Sbjct: 73 EIKECFDGLATNPDCRAIVLSASGKHFTAGIDLNDMINVGQTLAETDDYARKGVSMERMI 132
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ SISSLE CPKPVI+AVH ACIG G+ LITAADIRY T+DA+F +KEVDIG+ ADV
Sbjct: 133 KVYQDSISSLEHCPKPVITAVHKACIGAGVDLITAADIRYCTEDAFFQVKEVDIGMAADV 192
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP+ +G+QSL E+ FT RK EAAEA GLVS+L+ DK+SLL GA+ + ELIAS
Sbjct: 193 GTLQRLPKAVGSQSLARELCFTGRKFEAAEAHSSGLVSRLFPDKDSLLTGALAVAELIAS 252
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPVAV+ TK++LV+S +H +EGL+ +
Sbjct: 253 KSPVAVKTTKESLVYSLEHTNQEGLDHI 280
|
|
| ZFIN|ZDB-GENE-041010-170 ech1 "enoyl CoA hydratase 1, peroxisomal" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 122/210 (58%), Positives = 166/210 (79%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS-LGQEIAEQEDVARKSKILRKL 59
E+ +CF+ ++E+ ECR ++ S AGK+FT+G+DL GM + Q + + D AR S LR+
Sbjct: 73 EMVDCFNQIAEDPECRAVVFSGAGKLFTSGIDLMGMAGDILQPVGD--DTARISWNLRRT 130
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
I+ YQ++ S +E+CPKPVI AVHGACIGGG+ LITA DIR T+DAWF +KEVDIGL AD
Sbjct: 131 ISKYQETFSVIEKCPKPVIVAVHGACIGGGVDLITACDIRLCTQDAWFQVKEVDIGLAAD 190
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
VG LQRLPR+IG++SLVNE+A TARK+ A EA+ CGLVS+++ DKE+++AGA+E+ + IA
Sbjct: 191 VGTLQRLPRVIGSRSLVNELALTARKMYADEAKSCGLVSRVFPDKETMMAGALEMAQEIA 250
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQVD 209
SKSPVAVQGTK L++S DH+V + LN ++
Sbjct: 251 SKSPVAVQGTKVNLIYSGDHSVPDSLNYMN 280
|
|
| UNIPROTKB|Q13011 ECH1 "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 122/210 (58%), Positives = 160/210 (76%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF+ +S + +CR +++S AGK+FTAG+DL M S +I + +DVAR S LR
Sbjct: 88 EMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMAS---DILQPKGDDVARISWYLRD 144
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+IT YQ++ + +ERCPKPVI+AVHG CIGGG+ L+TA DIRY +DA+F +KEVD+GL A
Sbjct: 145 IITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAA 204
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGNQSLVNE+AFTARK+ A EA GLVS+++ DKE +L A+ L I
Sbjct: 205 DVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEI 264
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+SKSPVAVQ TK L++SRDH+V E LN V
Sbjct: 265 SSKSPVAVQSTKVNLLYSRDHSVAESLNYV 294
|
|
| UNIPROTKB|E2R921 ECH1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 121/208 (58%), Positives = 157/208 (75%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE--DVARKSKILRK 58
E+ ECF+ ++++ +CR +++S AGK+FTAG+DL M S EI + + DVAR S LR
Sbjct: 112 EMVECFNKIAQDPDCRAVVISGAGKVFTAGIDLMDMAS---EILQPQGDDVARISWNLRN 168
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
LIT YQ++ S +E+CPKPVI+A+HGACIG G+ LITA DIRY +DA+F +KEVDIGL A
Sbjct: 169 LITRYQETFSVIEKCPKPVIAAIHGACIGAGVDLITACDIRYCAQDAFFQVKEVDIGLAA 228
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP+IIGNQSLVNE+AFT R + A EA GLVS+++ DKE +L A L I
Sbjct: 229 DVGTLQRLPKIIGNQSLVNELAFTCRTMMADEALASGLVSRVFPDKEGMLDAAFTLAAEI 288
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
++KSPVAVQ TK L++SR+H V EGLN
Sbjct: 289 STKSPVAVQSTKINLIYSRNHPVTEGLN 316
|
|
| UNIPROTKB|F6PRB5 ECH1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 122/228 (53%), Positives = 167/228 (73%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS-LGQEIAEQEDVARKSKILRKL 59
E+ CF+ ++E+ +CRV+++S AGK+F++G+DL M S L Q + D AR S L L
Sbjct: 86 EMVVCFNKIAEDSDCRVVVISGAGKMFSSGIDLMDMASDLLQPAGD--DSARISWHLHSL 143
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+T YQ++ S +E+CPKPVI+A+HG CIGGG+ LITA DIRY+T+D++F +KEVD+GL AD
Sbjct: 144 LTRYQETFSVIEKCPKPVIAAIHGGCIGGGVDLITACDIRYSTRDSFFQVKEVDVGLAAD 203
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS--KLYDDKESLLAGAIELGEL 177
VG LQRLP++IGNQSLVNE+A+TARK+ A EA E GLVS +L+ DKES+L A L
Sbjct: 204 VGTLQRLPKVIGNQSLVNELAYTARKMMADEALESGLVSLSRLFPDKESMLDAAFTLAAE 263
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGV 225
I+SKSPVAVQ TK L++SRDH+V E LN + + + ++ K V
Sbjct: 264 ISSKSPVAVQSTKINLIYSRDHSVMESLNYMKSWNMSMLQTKDIMKSV 311
|
|
| RGD|69353 Ech1 "enoyl CoA hydratase 1, peroxisomal" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 115/208 (55%), Positives = 161/208 (77%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S +I + +DVAR + LR
Sbjct: 87 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMAS---DILQPPGDDVARIAWYLRD 143
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
LI+ YQK+ + +E+CPKPVI+A+HG CIGGG+ LI+A DIRY T+DA+F +KEVD+GL A
Sbjct: 144 LISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAA 203
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGN+SLVNE+ FTARK+ A EA + GLVS+++ DK+ +L A L I
Sbjct: 204 DVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADI 263
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
+SKSPVAVQG+K L++SRDH+V+E L+
Sbjct: 264 SSKSPVAVQGSKINLIYSRDHSVDESLD 291
|
|
| MGI|MGI:1858208 Ech1 "enoyl coenzyme A hydratase 1, peroxisomal" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 112/206 (54%), Positives = 159/206 (77%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S + +D AR + LR LI
Sbjct: 87 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASELMQ-PSGDDAARIAWYLRDLI 145
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ YQK+ + +E+CPKPVI+A+HG CIGGG+ L++A DIRY T+DA+F +KEVD+GL ADV
Sbjct: 146 SKYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLVSACDIRYCTQDAFFQIKEVDMGLAADV 205
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP++IGNQSLVNE+ F+ARK+ A EA + GLVS+++ DK+++L A L I+S
Sbjct: 206 GTLQRLPKVIGNQSLVNELTFSARKMMADEALDSGLVSRVFQDKDAMLNAAFALAADISS 265
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLN 206
KSPVAVQG+K L++SRDH+V+E L+
Sbjct: 266 KSPVAVQGSKINLIYSRDHSVDESLD 291
|
|
| WB|WBGene00021296 Y25C1A.13 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 96/208 (46%), Positives = 148/208 (71%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE--DVARKSKILRK 58
E + DSL+++ +CR II+S GK F AG+D++ LS I + + +V RK +++RK
Sbjct: 57 EFKKAIDSLADDPKCRSIIISGEGKAFCAGIDIAHGLSDILRIIQDDTIEVGRKGRLVRK 116
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
I Q ++LERCPKP+I+++H C+G G+ LITA DIR A++DA F+++EVD+GL A
Sbjct: 117 FIGEIQDCYTALERCPKPIIASIHSHCLGAGIDLITACDIRVASQDAIFSIREVDVGLAA 176
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
D+G L R+ +++GN S ++AFTAR A EA GL+S++YDD++SLL +I++ I
Sbjct: 177 DIGTLNRIQKVVGNDSWTRDVAFTARDFGADEALRFGLISRIYDDRQSLLENSIDMAARI 236
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
A KSP+AVQGTK+TL ++R+H+ ++ LN
Sbjct: 237 AEKSPIAVQGTKETLNYAREHSTDDSLN 264
|
|
| WB|WBGene00019022 F58A6.1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 99/208 (47%), Positives = 140/208 (67%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EIG+CF + E+ ECRV+IL GK F +GLDLS + L E E +D AR+ + + + I
Sbjct: 41 EIGDCFQLIDEDPECRVVILQGEGKHFCSGLDLSEVTFLNGE--EADDSARRGRSILRTI 98
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
QK + ++ C KPVI A+HG C+G + + TA D+R ATKDA ++KEVDIG+ ADV
Sbjct: 99 KFMQKQFTYIDECSKPVILAMHGYCLGAALDIATACDVRVATKDAVLSVKEVDIGMAADV 158
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G L RLP+I+GN S + +I+ +AR A EA + GL+S++YD +E ++ +++ +LIA
Sbjct: 159 GTLNRLPKIVGNHSWIKDISLSARHFSAGEALQFGLLSRVYDTREEMINEVLKMAKLIAL 218
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPV VQGTK L ++RDH VE LN V
Sbjct: 219 KSPVGVQGTKNALNYARDHTVENSLNYV 246
|
|
| TAIR|locus:2169258 DCI1 ""delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 102/230 (44%), Positives = 152/230 (66%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E + SL +N + VIILS AGK F +G+DL+ + S+ + + D R S+ LR+ I
Sbjct: 41 EFPKALSSLDQNPDVSVIILSGAGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKI 100
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ Q +I+++E+C KPVI+A+HGACIGGG+ LITA DIRY ++DA+F++KEVD+ + AD+
Sbjct: 101 KSMQAAITAIEQCRKPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADL 160
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP I+G + + E+A TAR+ +EA++ GLVSK++ K L G + E I
Sbjct: 161 GTLQRLPSIVGYANAM-ELALTARRFSGSEAKDLGLVSKVFGSKSELDNGVTTIAEGIGG 219
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230
KSP+AV GTK L+ SR+ +VE+GL+ V + + N+ VS + M
Sbjct: 220 KSPLAVTGTKAVLLRSREVSVEQGLDYVATWNSAMLISDDLNEAVSAQMM 269
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| B4TIG9 | CAID_SALHS | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| Q13011 | ECH1_HUMAN | 5, ., 3, ., 3, ., - | 0.5809 | 0.7454 | 0.625 | yes | N/A |
| Q57TJ1 | CAID_SALCH | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| Q5RFG0 | ECH1_PONAB | 5, ., 3, ., 3, ., - | 0.5761 | 0.7454 | 0.625 | yes | N/A |
| Q8FLA6 | CAID_ECOL6 | 4, ., 2, ., 1, ., - | 0.3062 | 0.7018 | 0.7394 | yes | N/A |
| P52046 | CRT_CLOAB | 4, ., 2, ., 1, ., 5, 5 | 0.3608 | 0.6509 | 0.6858 | yes | N/A |
| B5FHG4 | CAID_SALDC | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| Q8ZRX5 | CAID_SALTY | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| B5F749 | CAID_SALA4 | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| O35459 | ECH1_MOUSE | 5, ., 3, ., 3, ., - | 0.5432 | 0.7381 | 0.6207 | yes | N/A |
| B5RGA4 | CAID_SALG2 | 4, ., 2, ., 1, ., - | 0.3076 | 0.6981 | 0.7356 | yes | N/A |
| C0Q4L2 | CAID_SALPC | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| B4T6J5 | CAID_SALNS | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| B4EY26 | CAID_PROMH | 4, ., 2, ., 1, ., - | 0.3073 | 0.6872 | 0.7241 | yes | N/A |
| B1IRE0 | CAID_ECOLC | 4, ., 2, ., 1, ., - | 0.3062 | 0.7018 | 0.7394 | yes | N/A |
| B5BL54 | CAID_SALPK | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| Q62651 | ECH1_RAT | 5, ., 3, ., 3, ., - | 0.5528 | 0.7381 | 0.6207 | yes | N/A |
| B4TWR3 | CAID_SALSV | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| B5R1Q9 | CAID_SALEP | 4, ., 2, ., 1, ., - | 0.3076 | 0.6981 | 0.7356 | yes | N/A |
| B1LFW9 | CAID_ECOSM | 4, ., 2, ., 1, ., - | 0.3062 | 0.7018 | 0.7394 | yes | N/A |
| Q0TLV3 | CAID_ECOL5 | 4, ., 2, ., 1, ., - | 0.3062 | 0.7018 | 0.7394 | yes | N/A |
| A8ALR7 | CAID_CITK8 | 4, ., 2, ., 1, ., - | 0.3014 | 0.7018 | 0.7394 | yes | N/A |
| Q54SS0 | ECH1_DICDI | 5, ., 3, ., 3, ., - | 0.3649 | 0.7381 | 0.6928 | yes | N/A |
| A9MYJ5 | CAID_SALPB | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
| Q5PIL1 | CAID_SALPA | 4, ., 2, ., 1, ., - | 0.3028 | 0.6981 | 0.7356 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 275 | |||
| PRK06142 | 272 | PRK06142, PRK06142, enoyl-CoA hydratase; Provision | 6e-87 | |
| PLN02664 | 275 | PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d | 2e-62 | |
| cd06558 | 195 | cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme | 5e-54 | |
| COG1024 | 257 | COG1024, CaiD, Enoyl-CoA hydratase/carnithine race | 2e-49 | |
| pfam00378 | 245 | pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami | 3e-41 | |
| PRK07658 | 257 | PRK07658, PRK07658, enoyl-CoA hydratase; Provision | 2e-39 | |
| PRK06688 | 259 | PRK06688, PRK06688, enoyl-CoA hydratase; Provision | 1e-32 | |
| PRK06495 | 257 | PRK06495, PRK06495, enoyl-CoA hydratase; Provision | 5e-32 | |
| PRK07509 | 262 | PRK07509, PRK07509, enoyl-CoA hydratase; Provision | 1e-31 | |
| PRK07657 | 260 | PRK07657, PRK07657, enoyl-CoA hydratase; Provision | 1e-29 | |
| PRK06144 | 262 | PRK06144, PRK06144, enoyl-CoA hydratase; Provision | 5e-29 | |
| PRK08138 | 261 | PRK08138, PRK08138, enoyl-CoA hydratase; Provision | 6e-29 | |
| PRK05995 | 262 | PRK05995, PRK05995, enoyl-CoA hydratase; Provision | 9e-29 | |
| PRK05809 | 260 | PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata | 2e-28 | |
| PRK03580 | 261 | PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr | 2e-27 | |
| PRK07938 | 249 | PRK07938, PRK07938, enoyl-CoA hydratase; Provision | 4e-27 | |
| PRK07799 | 263 | PRK07799, PRK07799, enoyl-CoA hydratase; Provision | 2e-26 | |
| PRK05864 | 276 | PRK05864, PRK05864, enoyl-CoA hydratase; Provision | 2e-26 | |
| PRK08252 | 254 | PRK08252, PRK08252, enoyl-CoA hydratase; Provision | 6e-26 | |
| PRK09245 | 266 | PRK09245, PRK09245, enoyl-CoA hydratase; Provision | 1e-25 | |
| PRK05981 | 266 | PRK05981, PRK05981, enoyl-CoA hydratase; Provision | 9e-25 | |
| PRK06210 | 272 | PRK06210, PRK06210, enoyl-CoA hydratase; Provision | 2e-24 | |
| PRK06494 | 259 | PRK06494, PRK06494, enoyl-CoA hydratase; Provision | 2e-24 | |
| PRK08150 | 255 | PRK08150, PRK08150, enoyl-CoA hydratase; Provision | 3e-24 | |
| PRK09674 | 255 | PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; | 4e-24 | |
| PRK06563 | 255 | PRK06563, PRK06563, enoyl-CoA hydratase; Provision | 8e-24 | |
| PRK06127 | 269 | PRK06127, PRK06127, enoyl-CoA hydratase; Provision | 9e-24 | |
| PRK05980 | 260 | PRK05980, PRK05980, enoyl-CoA hydratase; Provision | 1e-23 | |
| PLN02600 | 251 | PLN02600, PLN02600, enoyl-CoA hydratase | 2e-23 | |
| PRK08258 | 277 | PRK08258, PRK08258, enoyl-CoA hydratase; Provision | 1e-22 | |
| PRK08260 | 296 | PRK08260, PRK08260, enoyl-CoA hydratase; Provision | 2e-22 | |
| PLN02888 | 265 | PLN02888, PLN02888, enoyl-CoA hydratase | 8e-22 | |
| PRK06190 | 258 | PRK06190, PRK06190, enoyl-CoA hydratase; Provision | 1e-21 | |
| PRK11154 | 708 | PRK11154, fadJ, multifunctional fatty acid oxidati | 1e-20 | |
| PRK08139 | 266 | PRK08139, PRK08139, enoyl-CoA hydratase; Validated | 3e-20 | |
| PRK11423 | 261 | PRK11423, PRK11423, methylmalonyl-CoA decarboxylas | 3e-20 | |
| PRK07511 | 260 | PRK07511, PRK07511, enoyl-CoA hydratase; Provision | 8e-20 | |
| PRK05862 | 257 | PRK05862, PRK05862, enoyl-CoA hydratase; Provision | 2e-19 | |
| PRK07854 | 243 | PRK07854, PRK07854, enoyl-CoA hydratase; Provision | 6e-19 | |
| PRK06143 | 256 | PRK06143, PRK06143, enoyl-CoA hydratase; Provision | 1e-18 | |
| PRK07468 | 262 | PRK07468, PRK07468, enoyl-CoA hydratase; Provision | 1e-18 | |
| PRK05870 | 249 | PRK05870, PRK05870, enoyl-CoA hydratase; Provision | 1e-18 | |
| PRK08140 | 262 | PRK08140, PRK08140, enoyl-CoA hydratase; Provision | 6e-18 | |
| TIGR02280 | 256 | TIGR02280, PaaB1, phenylacetate degradation probab | 8e-18 | |
| TIGR02441 | 737 | TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c | 1e-17 | |
| PRK08290 | 288 | PRK08290, PRK08290, enoyl-CoA hydratase; Provision | 5e-17 | |
| PRK11730 | 715 | PRK11730, fadB, multifunctional fatty acid oxidati | 2e-16 | |
| TIGR02440 | 699 | TIGR02440, FadJ, fatty oxidation complex, alpha su | 6e-16 | |
| PRK07260 | 255 | PRK07260, PRK07260, enoyl-CoA hydratase; Provision | 8e-16 | |
| PRK07327 | 268 | PRK07327, PRK07327, enoyl-CoA hydratase; Provision | 1e-15 | |
| PRK05869 | 222 | PRK05869, PRK05869, enoyl-CoA hydratase; Validated | 4e-15 | |
| TIGR02437 | 714 | TIGR02437, FadB, fatty oxidation complex, alpha su | 5e-15 | |
| PRK07827 | 260 | PRK07827, PRK07827, enoyl-CoA hydratase; Provision | 8e-15 | |
| PRK07110 | 249 | PRK07110, PRK07110, polyketide biosynthesis enoyl- | 2e-14 | |
| PRK07659 | 260 | PRK07659, PRK07659, enoyl-CoA hydratase; Provision | 6e-14 | |
| TIGR01929 | 259 | TIGR01929, menB, naphthoate synthase (dihydroxynap | 8e-14 | |
| PRK06072 | 248 | PRK06072, PRK06072, enoyl-CoA hydratase; Provision | 2e-13 | |
| PLN02267 | 239 | PLN02267, PLN02267, enoyl-CoA hydratase/isomerase | 2e-13 | |
| PRK09120 | 275 | PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydrata | 7e-13 | |
| PRK05674 | 265 | PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr | 9e-13 | |
| PLN02874 | 379 | PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol | 3e-12 | |
| PRK08321 | 302 | PRK08321, PRK08321, naphthoate synthase; Validated | 9e-12 | |
| PRK08259 | 254 | PRK08259, PRK08259, enoyl-CoA hydratase; Provision | 7e-11 | |
| PLN02921 | 327 | PLN02921, PLN02921, naphthoate synthase | 2e-10 | |
| TIGR03189 | 251 | TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecar | 5e-10 | |
| PRK08272 | 302 | PRK08272, PRK08272, enoyl-CoA hydratase; Provision | 1e-09 | |
| PRK06023 | 251 | PRK06023, PRK06023, enoyl-CoA hydratase; Provision | 2e-09 | |
| PLN02851 | 407 | PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol | 6e-09 | |
| PRK09076 | 258 | PRK09076, PRK09076, enoyl-CoA hydratase; Provision | 6e-09 | |
| PRK07112 | 255 | PRK07112, PRK07112, polyketide biosynthesis enoyl- | 7e-09 | |
| PRK12478 | 298 | PRK12478, PRK12478, enoyl-CoA hydratase; Provision | 8e-09 | |
| COG0447 | 282 | COG0447, MenB, Dihydroxynaphthoic acid synthase [C | 1e-08 | |
| TIGR03210 | 256 | TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd | 1e-08 | |
| PRK07396 | 273 | PRK07396, PRK07396, dihydroxynaphthoic acid synthe | 1e-08 | |
| PLN02988 | 381 | PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol | 2e-08 | |
| PRK05617 | 342 | PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol | 2e-06 | |
| PRK06213 | 229 | PRK06213, PRK06213, enoyl-CoA hydratase; Provision | 2e-05 | |
| PLN02157 | 401 | PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol | 3e-05 | |
| PLN03214 | 278 | PLN03214, PLN03214, probable enoyl-CoA hydratase/i | 7e-05 | |
| TIGR03200 | 360 | TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-car | 5e-04 |
| >gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (665), Expect = 6e-87
Identities = 100/208 (48%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ E F L + E R ++LS +GK F+ G+DL M + ++ ++ +AR LR+ I
Sbjct: 37 ELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLG-KDGLARPRTDLRREI 95
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q +I+++ C KPVI+AV G CIGGG+ LI+A D+RYA+ DA F+++EVD+G+ ADV
Sbjct: 96 LRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADV 155
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G+LQRLPRIIG+ L E+A T R I+AAEA + GLV+++YDD ++LLA A IA+
Sbjct: 156 GSLQRLPRIIGDGHL-RELALTGRDIDAAEAEKIGLVNRVYDDADALLAAAHATAREIAA 214
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSP+AV+GTK+ L + RDH V +GL V
Sbjct: 215 KSPLAVRGTKEVLDYMRDHRVADGLRYV 242
|
Length = 272 |
| >gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 2e-62
Identities = 96/208 (46%), Positives = 143/208 (68%), Gaps = 2/208 (0%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E + SL +N VIILS AG F +G+DL + S+ ++ + D R + LR+ I
Sbjct: 39 EFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQ-SSSGDRGRSGERLRRKI 97
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q +I+++E+C KPVI+A+HGACIGGG+ ++TA DIRY ++DA+F++KEVD+ +TAD+
Sbjct: 98 KFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADL 157
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP I+G + + E+A T R+ +EA+E GLVS+++ KE L G + E IA+
Sbjct: 158 GTLQRLPSIVGYGNAM-ELALTGRRFSGSEAKELGLVSRVFGSKEDLDEGVRLIAEGIAA 216
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSP+AV GTK L+ SR+ +VE+GL+ V
Sbjct: 217 KSPLAVTGTKAVLLRSRELSVEQGLDYV 244
|
Length = 275 |
| >gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily | Back alignment and domain information |
|---|
Score = 173 bits (441), Expect = 5e-54
Identities = 72/178 (40%), Positives = 98/178 (55%), Gaps = 12/178 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ D + + RV++L+ AGK F AG DL + +L E R I
Sbjct: 30 ELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEE----------ARAFI 79
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q+ + +L R PKPVI+AV+GA +GGG+ L A DIR A +DA F L EV +GL
Sbjct: 80 RELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGG 139
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G QRLPR++G + E+ T R+I A EA E GLV ++ D E LLA A+EL +
Sbjct: 140 GGTQRLPRLVG-PARARELLLTGRRISAEEALELGLVDEVVPD-EELLAAALELARRL 195
|
This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195 |
| >gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 2e-49
Identities = 77/205 (37%), Positives = 110/205 (53%), Gaps = 13/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ E D + + RV++L+ AGK F+AG DL +LS A + + +LR L
Sbjct: 36 ELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLRAL- 94
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
PKPVI+AV+G +GGG+ L A DIR A +DA F L EV++GL
Sbjct: 95 ----------ADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGD 144
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRLPR++G + E+ T I AAEA E GLV ++ D E LL A+EL +A
Sbjct: 145 GGTQRLPRLLG-RGRAKELLLTGEPISAAEALELGLVDEVVPDAEELLERALELARRLA- 202
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P+A+ TK+ + + + + E L
Sbjct: 203 APPLALAATKRLVRAALEADLAEAL 227
|
Length = 257 |
| >gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 3e-41
Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + L ++ + I+L+ F+AG D+ M + Q+
Sbjct: 29 ELIQALEKLEQDPSVKAIVLTGGPGAFSAGADIKEMAAEPLA---QQAQFSL-------- 77
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q S LE PKPVI+AV+G +GGG+ L A D R A +A F L EV +G+
Sbjct: 78 -EAQDLWSRLEDLPKPVIAAVNGYALGGGLELALACDYRIAADNAKFGLPEVKLGIIPGA 136
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRLPRIIG S E+ T R+I A EA + GLV K+ +E L+ AIEL + +A
Sbjct: 137 GGTQRLPRIIG-VSAALEMLLTGRRIRAQEALKMGLVDKV-VPEEQLVEEAIELAQRLAD 194
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
K P+A+ K + + + A+ E Q
Sbjct: 195 KPPLALAALKAAMRAALEDALPEVRAQA 222
|
This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245 |
| >gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 2e-39
Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 16/213 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ E D + +++ RV+++ G+ F+AG D+ S+ E + ++A+
Sbjct: 32 ELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSV-TEAEQATELAQLG------- 83
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q + +E+ KPVI+A+HGA +GGG+ L + IR+AT+ A L E+++GL
Sbjct: 84 ---QVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGF 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
QRLPR +G + E+ T+ I AEA + GLV+ ++ + E+LL A +L + IA
Sbjct: 141 AGTQRLPRYVGKAKAL-EMMLTSEPITGAEALKWGLVNGVFPE-ETLLDDAKKLAKKIAG 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESK 213
KSP + + L ++ + EG V +E+K
Sbjct: 199 KSPATTRAVLELLQTTKSSSYYEG---VKREAK 228
|
Length = 257 |
| >gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (302), Expect = 1e-32
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT 61
+ + ++ + + RV++L+ AG+ F+AG D+ + ++ +A ++ LR
Sbjct: 37 LADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPKPPDE--LAPVNRFLRA--- 91
Query: 62 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG 121
I++L PKPV++AV+G +G G+SL A D+ YA++ A F+L +GL D G
Sbjct: 92 -----IAAL---PKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAG 143
Query: 122 ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
LPR+IG E+ + A EA GLV+++ E L A A +A+
Sbjct: 144 GSALLPRLIGRAR-AAEMLLLGEPLSAEEALRIGLVNRVVPAAE-LDAEADAQAAKLAAG 201
Query: 182 SPVAVQGTKKTLVFSRDHAVEEGL 205
A++ TK+ + + +EE L
Sbjct: 202 PASALRYTKRAINAATLTELEEAL 225
|
Length = 259 |
| >gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 5e-32
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 15/193 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ FD +SE + RV++L+ AGK+F AG DL G + + + R+++
Sbjct: 34 ELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKGPGDLRAHNRRTR------ 87
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ ++ C KPVI+AV+G +G G+ L+ + DI A+++A F L E+D+GL
Sbjct: 88 ----ECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGL---A 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + R+ G SL + T ++ AAE G++ E L+ A+E+ IAS
Sbjct: 141 GGGKHAMRLFG-HSLTRRMMLTGYRVPAAELYRRGVIEACL-PPEELMPEAMEIAREIAS 198
Query: 181 KSPVAVQGTKKTL 193
KSP+A + K L
Sbjct: 199 KSPLATRLAKDAL 211
|
Length = 257 |
| >gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 1e-31
Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ L ++ R +ILS G F AGLD+ VA KL+
Sbjct: 34 ELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVK-------------SVASSPGNAVKLL 80
Query: 61 TTYQKSISSL--------ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 112
++L R P PVI+A+ G C GGG+ + ADIR A D ++ E
Sbjct: 81 FKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEA 140
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
GL D+ L ++ + + E+ +TAR A EA E GLV+ + DD LA A+
Sbjct: 141 KWGLVPDMAGTVSLRGLVR-KDVARELTYTARVFSAEEALELGLVTHVSDDP---LAAAL 196
Query: 173 ELGELIASKSPVAVQGTKKTL 193
L IA +SP A+ K+ +
Sbjct: 197 ALAREIAQRSPDAIAAAKRLI 217
|
Length = 262 |
| >gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 1e-29
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 50/254 (19%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDL---SGMLSLGQEIAEQEDVARKSKIL 56
E+ ++E RV+IL+ AG K F AG DL +GM +E V
Sbjct: 35 ELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM--------NEEQV------- 79
Query: 57 RKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL 116
R ++ + ++ +E+ P+PVI+A++G +GGG+ L A D R A + A L E + +
Sbjct: 80 RHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAI 139
Query: 117 TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG E+ +T R+I A EA+E GLV + L AIE+ E
Sbjct: 140 IPGAGGTQRLPRLIG-VGRAKELIYTGRRISAQEAKEIGLVEFVV-PAHLLEEKAIEIAE 197
Query: 177 LIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCPE 236
IAS P+AV+ K+ A+ G+ QVD + G+ E+ +++
Sbjct: 198 KIASNGPIAVRQAKE--------AISNGI-QVDLHT-----------GLQIEKQAYE--- 234
Query: 237 CLIGSIGVFHTLDR 250
G T DR
Sbjct: 235 ------GTIPTKDR 242
|
Length = 260 |
| >gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 5e-29
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 27/212 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQED-VARKSKILRK 58
+ E ++++ + R ++L AG K F AG D++ + + ED VA + +I R
Sbjct: 39 GLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQF----RAFSTAEDAVAYERRIDR- 93
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWF------TLKEV 112
+ +LE+ P I+A+ GAC+GGG ++ A D+R AT A F TL
Sbjct: 94 -------VLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTL--- 143
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
G + L RL ++G V ++ FTAR +EA EA GLV+++ +D +L A A
Sbjct: 144 --GNCLSMSNLARLVALLGAAR-VKDMLFTARLLEAEEALAAGLVNEVVED-AALDARAD 199
Query: 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEG 204
L EL+A+ +P+ ++ TK+ L R + +G
Sbjct: 200 ALAELLAAHAPLTLRATKEALRRLRREGLPDG 231
|
Length = 262 |
| >gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 6e-29
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E F LSE+ + R I+L+ K+F AG D+ + G I Y
Sbjct: 42 EHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAGA------------------IEMY 83
Query: 64 QKSI----SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ ++ +CPKPVI+AV+G +GGG L ADI A + A F E+ +GL
Sbjct: 84 LRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPG 143
Query: 120 VGALQRLPRIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G QRL R +G +++ +A T + A EA GLVS++ +D E L A+EL I
Sbjct: 144 AGGTQRLVRAVGKFKAM--RMALTGCMVPAPEALAIGLVSEVVED-EQTLPRALELAREI 200
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGL 205
A P+A+ K+ ++ D ++ L
Sbjct: 201 ARMPPLALAQIKEVVLAGADAPLDAAL 227
|
Length = 261 |
| >gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 9e-29
Identities = 66/208 (31%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ F +L ++ R ++L+ AGK F AG DL+ M + ++ D R + +LR
Sbjct: 35 ELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSDDENRADARRLADMLR- 93
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL-T 117
++ RCPKPVI+ VHG GGM L+ A DI A A F L EV +GL
Sbjct: 94 ----------AIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIP 143
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
A + + R +G + TA + +AAEA GLV ++ E+L A EL
Sbjct: 144 ATISPY--VIRAMGER-AARRYFLTAERFDAAEALRLGLVHEVV-PAEALDAKVDELLAA 199
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ + SP AV+ K+ + ++ L
Sbjct: 200 LVANSPQAVRAGKRLVRDVAGRPIDAAL 227
|
Length = 262 |
| >gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 2e-28
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ D + ++ +IL+ AG K F AG D+S M +++ E+E RK +L
Sbjct: 35 ELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEM----KDLNEEE--GRKFGLLG-- 86
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
K LE KPVI+A++G +GGG L A DIR A++ A F EV +G+T
Sbjct: 87 ----NKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPG 142
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G QRL RI+G E+ +T I A EA GLV+K+ + E L+ A L IA
Sbjct: 143 FGGTQRLARIVG-PGKAKELIYTGDMINAEEALRIGLVNKVV-EPEKLMEEAKALANKIA 200
Query: 180 SKSPVAVQGTK 190
+ +P+AV+ K
Sbjct: 201 ANAPIAVKLCK 211
|
Length = 260 |
| >gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-27
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDL---------SGMLSLGQEIAEQEDVA 50
+GE F + ++ E RV I++ AG K F+AG DL G E
Sbjct: 33 AMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTE--- 89
Query: 51 RKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLK 110
+ L KPVI+AV+G GGG L AAD +A F L
Sbjct: 90 -----IFDL--------------DKPVIAAVNGYAFGGGFELALAADFIVCADNASFALP 130
Query: 111 EVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAG 170
E +G+ D G + RLP+ + ++ NE+ T R+++A EA G+V+++ + L+
Sbjct: 131 EAKLGIVPDSGGVLRLPKRL-PPAIANEMVMTGRRMDAEEALRWGIVNRVV-PQAELMDR 188
Query: 171 AIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDK 210
A EL + + + +P+A+ K+ + + VEE +
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRS 228
|
Length = 261 |
| >gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 4e-27
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + + + + RV++L A G+ F AG+D+ +E+ R
Sbjct: 32 ALADAITAAGADPDTRVVVLRAEGRGFNAGVDI-------KELQATPGFTALIDANRGCF 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ ++ C PVI+AVHG C+GGG+ L+ AD+ A+ DA F L EVD G +
Sbjct: 85 AAF----RAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGA---L 137
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA L R++ Q L+ + FTA I AAE G V ++ ++ L A+E+ IA+
Sbjct: 138 GAATHLQRLVP-QHLMRALFFTAATITAAELHHFGSVEEVV-PRDQLDEAALEVARKIAA 195
Query: 181 KSPVAVQGTKKTL 193
K ++ K+ L
Sbjct: 196 KDTRVIRAAKEAL 208
|
Length = 249 |
| >gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 2e-26
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS--LGQEIAE-QEDVARKSKILRKLI 60
+ +D + + + R IL+ AG F AG+DL G + D +R +L+
Sbjct: 39 DAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKG-- 96
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
R KP+I+AV G I GG ++ DIR A + A F + E L
Sbjct: 97 ----------RRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMG 146
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G+ RL R I ++ ++ T R I AAEA+E GL+ + D ++ L A+EL ELI +
Sbjct: 147 GSAVRLVRQI-PYTVACDLLLTGRHITAAEAKEIGLIGHVVPDGQA-LDKALELAELINA 204
Query: 181 KSPVAVQGTKKTL 193
P+AVQ +T+
Sbjct: 205 NGPLAVQAILRTI 217
|
Length = 263 |
| >gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-26
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 14/212 (6%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E +S + RV++L+ AG+ F++G D + E + R + LR +
Sbjct: 44 EALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGV----VPHVEGLTRPTYALRSM-ELL 98
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGA 122
I +L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ GLTA ++G
Sbjct: 99 DDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGL 158
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
LPR IG+ S EI T R ++A EA GLVS+ D E LL + +A S
Sbjct: 159 SYLLPRAIGS-SRAFEIMLTGRDVDAEEAERIGLVSRQVPD-EQLLDTCYAIAARMAGFS 216
Query: 183 PVAVQGTKKTLVFSRD------HAVEEGLNQV 208
++ TK+TL D H EGL Q+
Sbjct: 217 RPGIELTKRTLWSGLDAASLEAHMQAEGLGQL 248
|
Length = 276 |
| >gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 6e-26
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT 61
+ D L + + V IL+ AG F AG+DL + +
Sbjct: 35 LAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFA------------RGERPSIPG--- 79
Query: 62 TYQKSISSLERCP--KPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ L P KP+I+AV G + GG L A D+ A +DA F L EV GL A
Sbjct: 80 ---RGFGGLTERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAA 136
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G L RLPR I + E+A T + A A E GLV++L + ++ L A+EL E IA
Sbjct: 137 GGGLLRLPRRIPYH-IAMELALTGDMLTAERAHELGLVNRLTEPGQA-LDAALELAERIA 194
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEE 203
+ P+AV +K+ +V S D + +E
Sbjct: 195 ANGPLAVAASKRIVVESGDWSEDE 218
|
Length = 254 |
| >gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-25
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ +++ + R +IL+ AG F++G ++ M A +R
Sbjct: 35 ALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMR------ARVGAFGGSPADIR--- 85
Query: 61 TTYQKSIS----SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL 116
Y+ I +L PVI+AV+G IG G L DIR A++ A F V +GL
Sbjct: 86 QGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGL 145
Query: 117 TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G LPRIIG + E+AFT I+AA A E GLVS++ + LL A L E
Sbjct: 146 IPGDGGAWLLPRIIGM-ARAAEMAFTGDAIDAATALEWGLVSRVVPA-DQLLPAARALAE 203
Query: 177 LIASKSPVAVQGTKKTL 193
IA+ P A++ TK+ L
Sbjct: 204 RIAANPPHALRLTKRLL 220
|
Length = 266 |
| >gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 9e-25
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 1 EIGECFDSLSENE-ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
+ E D++ + + E R ++L+ AG+ F G +L G S G+E D L
Sbjct: 35 GLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAA------L 88
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
T Y + L P P+++AV+G G GMS D+ + A+F IGL D
Sbjct: 89 ETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPD 148
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G+ LPR++G + E++ K+ A A + GLV+++ DD E L+A A++L +A
Sbjct: 149 GGSTWLLPRLVGKARAM-ELSLLGEKLPAETALQWGLVNRVVDDAE-LMAEAMKLAHELA 206
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLN 206
+ VA+ +K S ++ EE LN
Sbjct: 207 NGPTVALGLIRKLYWDSPENDFEEQLN 233
|
Length = 266 |
| >gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 98.6 bits (246), Expect = 2e-24
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ D + RVI+L+ AG+ F AG D+ + ++ ++ R R+
Sbjct: 37 EVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRR-- 94
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ L KPVI+A++GAC G G++ D+R+A A FT GL A+
Sbjct: 95 PDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEH 154
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LPR++G+ + + ++ +AR A EA GLV+++ E L+ + E +A
Sbjct: 155 GISWILPRLVGHANAL-DLLLSARTFYAEEALRLGLVNRVVPPDE-LMERTLAYAEDLAR 212
Query: 181 K-SPVAVQGTKKTL 193
SP ++ K+ L
Sbjct: 213 NVSPASMAVIKRQL 226
|
Length = 272 |
| >gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 2e-24
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ E FD + + E V I++ AG K F+AG DL + G+ +
Sbjct: 35 ELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKRGWPESGFG--------- 85
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
++S KP+I+AV+G +GGG L A D+ A ++A F L E +GL A
Sbjct: 86 ------GLTSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAAL 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G L RLPR IG + + I T R++ A E E G V+++ E LLA A + I
Sbjct: 140 AGGLHRLPRQIGLKRAMGMI-LTGRRVTAREGLELGFVNEVVPAGE-LLAAAERWADDIL 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEE 203
+ SP++++ +K+ + + ++EE
Sbjct: 198 ACSPLSIRASKQAVYRGLEVSLEE 221
|
Length = 259 |
| >gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 3e-24
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ F L E R ++L G F AGLDLS E+ E++ R
Sbjct: 33 ALRAAFARLPE--GVRAVVLHGEGDHFCAGLDLS-------ELRERDAGEGMHHSRR--- 80
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + ++ PVI+A+HGA +GGG+ L +AA IR A + +F L E G+
Sbjct: 81 --WHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGG 138
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G R+PR+IG + + ++ T R +A E GL L E+ L A+EL IA
Sbjct: 139 GGSVRVPRLIG-VARMTDMMLTGRVYDAQEGERLGLAQYLVPAGEA-LDKAMELARRIAQ 196
Query: 181 KSPVA 185
+P+
Sbjct: 197 NAPLT 201
|
Length = 255 |
| >gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 4e-24
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 16/207 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ ++ + + V +++ + F AG DL E+AE++ A L
Sbjct: 33 QLVNELEAAATDTSIGVCVITGNARFFAAGADL-------NEMAEKDLAA----TLNDPR 81
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + KP+I+AV+G +G G L DI A ++A F L E+ +G+
Sbjct: 82 PQLWQRLQAFN---KPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGA 138
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL +++ T I A +A++ GLVS+++ E L A++L IA
Sbjct: 139 GGTQRLIRSVG-KSLASQMVLTGESITAQQAQQAGLVSEVFPP-ELTLERALQLASKIAR 196
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
SP+A++ K+ L S++ ++ GL Q
Sbjct: 197 HSPLALRAAKQALRQSQEVDLQAGLAQ 223
|
Length = 255 |
| >gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 96.6 bits (241), Expect = 8e-24
Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 9 LSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 68
++E RV +L A G+ FTAGLDL+ DVA K+ + I
Sbjct: 38 YEADDELRVAVLFAHGEHFTAGLDLA-------------DVA--PKLAAGGFPFPEGGID 82
Query: 69 SL----ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQ 124
R KP++ AV G C+ G+ L+ AADI A + F EV G+ GA
Sbjct: 83 PWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATL 142
Query: 125 RLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPV 184
R P+ G + + + T + +A EA GLV ++ E L AIEL E IA +P+
Sbjct: 143 RFPQAAGWGNAMRYL-LTGDEFDAQEALRLGLVQEVVPPGE-QLERAIELAERIARAAPL 200
Query: 185 AVQGTKKTLVFSRDHAVEEG 204
VQ T + +R AV EG
Sbjct: 201 GVQATLAS---ARA-AVREG 216
|
Length = 255 |
| >gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 9e-24
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + + +++ RV++L+ AG K F +G D+S + ++ E VA + +
Sbjct: 43 LPQALAAAEDDDAIRVVVLTGAGEKAFVSGADIS---QFEESRSDAEAVAAYEQA----V 95
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q +++ KP I+ + G CIGGGM + A DIR A +D+ F + +GL
Sbjct: 96 EAAQAALAD---YAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGY 152
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
++ L ++G S ++ +TAR+ +AAEA GLV ++ + L + IA
Sbjct: 153 DGVKNLVDLVG-PSAAKDLFYTARRFDAAEALRIGLVHRVTAADD-LETALADYAATIAG 210
Query: 181 KSPVAVQGTKKTLV 194
+P+ ++ K+ +
Sbjct: 211 NAPLTLRAAKRAIA 224
|
Length = 269 |
| >gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 1e-23
Identities = 68/205 (33%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 4 ECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 62
D++ +E R +IL+ AG + F+AG D+ +A DVA LR +
Sbjct: 37 ARLDAIEVDESVRAVILTGAGDRAFSAGADIHE---FSASVAAGADVA-----LRDFVRR 88
Query: 63 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA 122
Q + LE PKPVI+AV+G GGG + A + A++ A F E+ +G+ G
Sbjct: 89 GQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGG 148
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
QRLPR+ G + E+ T A A E GLV+ + E LL A L I S
Sbjct: 149 TQRLPRLAGRKR-ALELLLTGDAFSAERALEIGLVNAVV-PHEELLPAARALARRIIRHS 206
Query: 183 PVAVQGTKKTLVFSRDHAVEEGLNQ 207
PVAV AV GLN
Sbjct: 207 PVAVAAIL--------TAVTRGLNL 223
|
Length = 260 |
| >gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 2e-23
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 6 FDSLSENEECRVIIL-SAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 64
F+ + + RV++L S+ +F AG DL +E ++K + + +
Sbjct: 31 FEKIQADASARVVMLRSSVPGVFCAGADL------------KERRKMSPSEVQKFVNSLR 78
Query: 65 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQ 124
+ SSLE P I+ V GA +GGG+ L + D+R ++A F L E + + G Q
Sbjct: 79 STFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQ 138
Query: 125 RLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPV 184
RLPR++G +S E+ FT R+I A EA GLV+ E+ A+EL + I K P+
Sbjct: 139 RLPRLVG-RSRAKELIFTGRRIGAREAASMGLVNYCVPAGEAYEK-ALELAQEINQKGPL 196
Query: 185 AVQGTKKTLVFSRDHAVEEGLNQVDKES 212
A++ KK A+ EG +VD S
Sbjct: 197 AIKMAKK--------AINEGS-EVDMAS 215
|
Length = 251 |
| >gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 1e-22
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS--LGQEIAEQEDVARKSKILRK 58
E+ + F L ++ + ++L+ AG F +G D+ ++ ++ E R + L K
Sbjct: 48 ELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVK 107
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT- 117
++ CP+P+I+AV G C G G L A+D+R T A +GL
Sbjct: 108 ----------AMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAG 157
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
AD+GA LPRIIG Q +E+ +T R + A E G ++L + E LLA A L
Sbjct: 158 ADMGACALLPRIIG-QGRASELLYTGRSMSAEEGERWGFFNRLVEP-EELLAEAQALARR 215
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEE 203
+A+ A TK L D +EE
Sbjct: 216 LAAGPTFAHGMTKTMLHQEWDMGLEE 241
|
Length = 277 |
| >gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 2e-22
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG-----MLSLGQEIAEQEDVARKSKI 55
E+ E FD+ ++ R +I++ AG+ F AG DLS L + E ++ R
Sbjct: 35 ELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPS 94
Query: 56 LRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 115
+ + + KPVI+AV+G +G G ++ A DIR A+ A F G
Sbjct: 95 DDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRG 154
Query: 116 LTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELG 175
+ + + LPR++G Q+ + E ++ R +A EA + GLV ++ + LL A L
Sbjct: 155 IVPEAASSWFLPRLVGLQTAL-EWVYSGRVFDAQEALDGGLVRSVH-PPDELLPAARALA 212
Query: 176 -ELIASKSPVAV 186
E+ + SPV+V
Sbjct: 213 REIADNTSPVSV 224
|
Length = 296 |
| >gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 8e-22
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
F L E++ +VIIL+ +G+ F +G+DL+ E+V + + Q
Sbjct: 46 FKRLDEDDSVKVIILTGSGRAFCSGVDLTA----------AEEVFKGDVKDVETDPVAQ- 94
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQR 125
+ERC KP+I A++G I G + A DI A++ A F G+ G Q+
Sbjct: 95 ----MERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQK 150
Query: 126 LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
L RIIG E++ TA + A A GLV+ + ++ E LL A E+ E I
Sbjct: 151 LSRIIGANR-AREVSLTAMPLTAETAERWGLVNHVVEESE-LLKKAREVAEAIIKN 204
|
Length = 265 |
| >gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 1e-21
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 2 IGECFDSLSE---NEECRVIILSAAGKIFTAGLDL----SGMLSLGQEIAEQEDVARKSK 54
F +L+E +++ V++L+ A F AGLDL + G + A
Sbjct: 33 RRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGSAYGAQDALPNPSPA--- 89
Query: 55 ILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI 114
KPVI A++GA + GG+ L A DI A++ A F +
Sbjct: 90 ---------------WPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARV 134
Query: 115 GLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIEL 174
G+ G RLP+ +G ++ T ++AA+A GLV+++ E LL A L
Sbjct: 135 GILPGWGLSVRLPQKVG-IGRARRMSLTGDFLDAADALRAGLVTEVVPHDE-LLPRARRL 192
Query: 175 GELIASKSPVAVQGTKK 191
IA +P AV+ K
Sbjct: 193 AASIAGNNPAAVRALKA 209
|
Length = 258 |
| >gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 1e-20
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L E++E + V+ +S F AG D++ ML+ + E E +AR+
Sbjct: 38 QVRAILKQLREDKELKGVVFISGKPDNFIAGADIN-MLAACKTAQEAEALARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA--WFTLKEVDIGLT 117
Q+ + +E P PV++A+HGAC+GGG+ L A R T D L EV +GL
Sbjct: 91 ----QQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDD---KESLLAGAIEL 174
G QRLPR+IG + ++ I T +++ A +A + GLV DD LL A+EL
Sbjct: 147 PGSGGTQRLPRLIGVSTALDMI-LTGKQLRAKQALKLGLV----DDVVPHSILLEVAVEL 201
|
Length = 708 |
| >gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 3e-20
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ D+++ + RV++L+AAGK F AG DL M + AR R L
Sbjct: 42 ALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRA-----------ARGLAYFRALF 90
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL---T 117
+ + ++ P+PVI+ VHG G L+ + D+ A A F + V+IGL T
Sbjct: 91 ARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCST 150
Query: 118 ADVGALQR-LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
V AL R +PR Q++ E+ T I+AA ARE GLV+++ ++L A L
Sbjct: 151 PMV-ALSRNVPR---KQAM--EMLLTGEFIDAATAREWGLVNRVV-PADALDAAVARLAA 203
Query: 177 LIASKSPVAV 186
+IA+KSP AV
Sbjct: 204 VIAAKSPAAV 213
|
Length = 266 |
| >gnl|CDD|236908 PRK11423, PRK11423, methylmalonyl-CoA decarboxylase; Provisional | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 3e-20
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 18/195 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAA--GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRK 58
++ + L+ E RV+IL A K+++AG D+ + S G+ D LR+
Sbjct: 35 DLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGR------DPLSYDDPLRQ 87
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
++ +++ PKPVI+ V G+ GG LI + D+ A + F + ++G+
Sbjct: 88 IL-------RMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPY 140
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
++ + G +V E+ FTA I A A G+++ + + +E L +++ I
Sbjct: 141 NLSGILNFTNDAGFH-IVKEMFFTASPITAQRALAVGILNHVVEVEE-LEDFTLQMAHHI 198
Query: 179 ASKSPVAVQGTKKTL 193
+ K+P+A+ K+ L
Sbjct: 199 SEKAPLAIAVIKEQL 213
|
Length = 261 |
| >gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 8e-20
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E ++ + R ++L+ AG F AG +L+ +L + + I
Sbjct: 37 EALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAKPPSVQ---------AASIDGL 87
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGAL 123
I ++ PKPVI+AV GA G G SL A D+ A +DA F + V +GLT D G
Sbjct: 88 HDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGS 147
Query: 124 QRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSP 183
L R + Q L E+ + I A G+V++L + ++ LA A+ L + +A+ SP
Sbjct: 148 WFLARALPRQ-LATELLLEGKPISAERLHALGVVNRLAEPGQA-LAEALALADQLAAGSP 205
Query: 184 VAVQGTK 190
A+ K
Sbjct: 206 NALARIK 212
|
Length = 260 |
| >gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 85.1 bits (211), Expect = 2e-19
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+G + +E I+++ + K F AG D+ M L + D I
Sbjct: 35 ELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSFMDVYKGD----------YI 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T ++K + R KPVI+AV G +GGG L DI A A F E+ +G+ +
Sbjct: 85 TNWEK----VARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGM 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G ++ ++ T R ++AAEA GLVS++ + LL A+ IAS
Sbjct: 141 GGSQRLTRAVG-KAKAMDLCLTGRMMDAAEAERAGLVSRVV-PADKLLDEALAAATTIAS 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
S AV K+ + + + + EGL
Sbjct: 199 FSLPAVMMAKEAVNRAYETTLAEGL 223
|
Length = 257 |
| >gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 6e-19
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 10 SENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 69
+ +E R I+L+ G +F AG DLSG LI + + +
Sbjct: 39 AVDESARAIVLTGQGTVFCAGADLSGD-------------VYADDFPDALI----EMLHA 81
Query: 70 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI 129
++ P PVI+A++G IG G+ L A D+R +A+F G+ D ++RL +
Sbjct: 82 IDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSL 141
Query: 130 IGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGT 189
+G + A K+ A +A G+ +++ LA A IA +P+A+Q
Sbjct: 142 VGG-GRARAMLLGAEKLTAEQALATGMANRIGT-----LADAQAWAAEIAGLAPLALQHA 195
Query: 190 KKTLVFSRDHAVEE 203
K+ V + D A+EE
Sbjct: 196 KR--VLNDDGAIEE 207
|
Length = 243 |
| >gnl|CDD|180423 PRK06143, PRK06143, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 1e-18
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 6 FDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 64
L+ + + RV++L AG K F G D+ M +L Q AE I+ +
Sbjct: 43 LRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAE------------AFISRLR 90
Query: 65 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQ 124
++ P PVI+ + G C+GGG+ L A D+R A DA F + EV +G+ + + A
Sbjct: 91 DLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGIPSVIHA-A 149
Query: 125 RLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE-LGELIASKSP 183
LPR+IG + + T I+AA+A GLV ++ E L A+E L +A P
Sbjct: 150 LLPRLIGW-ARTRWLLLTGETIDAAQALAWGLVDRVVPLAE--LDAAVERLAASLAGCGP 206
Query: 184 VAVQGTKKTLVFSRDHAVEEGLN 206
A++ K+ L D ++ ++
Sbjct: 207 QALRQQKRLLREWEDMPLDVAID 229
|
Length = 256 |
| >gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 1e-18
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ L+ + RV++L+ AGK F AG DL M Q A++ ++ R+L
Sbjct: 36 ELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMR--AQMTADRATRIEEA---RRLA 90
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT-AD 119
+ +L PKP+I + G GGG+ LI+ D+ A A F L E +GL A
Sbjct: 91 MMLK----ALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPAT 146
Query: 120 VGALQRLPRIIG--NQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
+ P ++ ++ + +AR +A EA GL+S++ + L A+E E+
Sbjct: 147 IS-----PYVVARMGEANARRVFMSARLFDAEEAVRLGLLSRVVPAER--LDAAVE-AEV 198
Query: 178 IA--SKSPVAVQGTKK 191
S +P AV K
Sbjct: 199 TPYLSCAPGAVAAAKA 214
|
Length = 262 |
| >gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 1e-18
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ + + + ++++ AGK F AG DL+ + + AE LR++
Sbjct: 34 QLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGRPAEDG--------LRRI- 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Y ++ CP P I+AV+GA +G G++L AAD+R A A F + +GL
Sbjct: 85 --YD-GFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGG 141
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA L R +G Q + F R +A A GL + DD +A A+EL A+
Sbjct: 142 GATWMLQRAVGPQVARAALLFGMR-FDAEAAVRHGLALMVADD---PVAAALELAAGPAA 197
Query: 181 KSPVAVQGTKKTL 193
V TK ++
Sbjct: 198 APRELVLATKASM 210
|
Length = 249 |
| >gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 6e-18
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLS--------GMLSLGQEIAEQEDVARK 52
E+ E D + E++ R ++L+ AG+ F AG DL+ M LG+ I
Sbjct: 35 ELREALDQV-EDDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGESIE-------- 85
Query: 53 SKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 112
T Y + L P PVI+AV+G G G +L A DI A + A F V
Sbjct: 86 --------TFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFV 137
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
IGL D G LPR++G + +A K+ A +A + GL+ ++ DD +L A
Sbjct: 138 KIGLVPDSGGTWFLPRLVG-MARALGLALLGEKLSAEQAEQWGLIWRVVDD-AALADEAQ 195
Query: 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211
+L +A++ + K+ + S + ++ Q+D E
Sbjct: 196 QLAAHLATQPTRGLALIKQAMNASATNTLDA---QLDLE 231
|
Length = 262 |
| >gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 8e-18
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLS-------GMLSLGQEIAEQEDVARKS 53
E+ E + + E ++ R ++L+ AG+ F AG DLS G LG+ I
Sbjct: 30 ELREALERV-ERDDARALMLTGAGRGFCAGQDLSERNPTPGGAPDLGRTIETF------- 81
Query: 54 KILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVD 113
Y + L P PV+ AV+G G G +L A DI A + A F
Sbjct: 82 ---------YNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAK 132
Query: 114 IGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173
IGL D G LPR++G ++ +A K++A A GL+ ++ DD +L+ A
Sbjct: 133 IGLIPDSGGTWSLPRLVG-RARAMGLAMLGEKLDARTAASWGLIWQVVDD-AALMDEAQA 190
Query: 174 LGELIASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
L +A++ + TK+ + + ++++ L+
Sbjct: 191 LAVHLAAQPTRGLALTKRAIQAAATNSLDTQLD 223
|
This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256 |
| >gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 1e-17
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 1 EIGECFDSLSENEECRVIIL-SAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E E + L NE + +L S F AG D+ M++ + E ++++
Sbjct: 45 EFKEVMNELWTNEAIKSAVLISGKPGSFVAGADI-QMIAACKTAQEVTQLSQEG------ 97
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
Q+ +E+ KP+++A+ G+C+GGG+ L A R ATKD L EV +GL
Sbjct: 98 ----QEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLL 153
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYD 162
G QRLP++ G + + ++ T +KI A A++ G+V +L D
Sbjct: 154 PGAGGTQRLPKLTGVPAAL-DMMLTGKKIRADRAKKMGIVDQLVD 197
|
Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human , pig , and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). Length = 737 |
| >gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 5e-17
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ F ++ RVI+L+ AGK F+AG DL G +++ + L
Sbjct: 35 ELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGS----GTPGRDRDPGPDQHPTLWWDG 90
Query: 61 TTY--------QKSISSLERC------PKPVISAVHGACIGGGMSLITAADIRYATKDAW 106
T ++ L C PKP I+ V GACI GG+ L D+ A+ DA+
Sbjct: 91 ATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAF 150
Query: 107 FTLKEVDIGLTADVGALQRL-------PRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159
F+ V +G + ++ PR E+ FT ++ A EA G+V++
Sbjct: 151 FSDPVVRMG----IPGVEYFAHPWELGPRK------AKELLFTGDRLTADEAHRLGMVNR 200
Query: 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKK 191
+ E L A +EL IA+ P ++ TK+
Sbjct: 201 VVPRDE-LEAETLELARRIAAMPPFGLRLTKR 231
|
Length = 288 |
| >gnl|CDD|183293 PRK11730, fadB, multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 2e-16
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE D+L + + ++L++A F G D++ LSL E+ L + +
Sbjct: 38 SLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAAPEEE---------LSQWL 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ LE P P ++A++G +GGG + A D R A+ DA L E +G+
Sbjct: 89 HFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGF 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV------SKLYDDKESLLAGAIEL 174
G RLPR+IG + + IA + + A +A + G V KL + +LL AI
Sbjct: 149 GGTVRLPRLIGADNALEWIA-AGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIA- 206
Query: 175 GEL 177
G+L
Sbjct: 207 GKL 209
|
Length = 715 |
| >gnl|CDD|131493 TIGR02440, FadJ, fatty oxidation complex, alpha subunit FadJ | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 6e-16
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ E L ++ R ++++S F AG D+S ML+ Q E + +A++ ++L
Sbjct: 33 QVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADIS-MLAACQTAGEAKALAQQGQVL--- 88
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
+ LE P PV++A+HGAC+GGG+ L A R + D L EV +GL
Sbjct: 89 -------FAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLL 141
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157
G QRLPR+IG + ++ I T +++ A +A + GLV
Sbjct: 142 PGSGGTQRLPRLIGVSTALDMI-LTGKQLRAKQALKLGLV 180
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog model [Fatty acid and phospholipid metabolism, Degradation]. Length = 699 |
| >gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 8e-16
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI E E+ R ++++A GK+F+ G DL M + +++DV KI +L+
Sbjct: 33 EILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEM----KRAVDEDDVQSLVKIA-ELV 87
Query: 61 TTYQKSIS-SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
IS ++++ PKPVI V GA G ++ AAD A+ F V +GL D
Sbjct: 88 NE----ISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPD 143
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160
G L L R IG +A T + A +A E G V ++
Sbjct: 144 AGGLFLLTRAIGLNRAT-HLAMTGEALTAEKALEYGFVYRV 183
|
Length = 255 |
| >gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 1e-15
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 26/200 (13%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDV-ARKSKILRKL 59
E+ + + + + + RV+++ GK F+AG G L+L +E+A+ +V AR + R L
Sbjct: 43 ELADIWRDVDRDPDVRVVLIRGEGKAFSAG----GDLALVEEMADDFEVRARVWREARDL 98
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ ++ C KP++SA+HG +G G+ ADI A KDA +G+ A
Sbjct: 99 VY-------NVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAG 151
Query: 120 VGALQRLPRIIGNQSLVNEIA------FTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173
A P + G +A + EA GLVS DD E LL A+E
Sbjct: 152 DHAAIVWPLLCG-------MAKAKYYLLLCEPVSGEEAERIGLVSLAVDDDE-LLPKALE 203
Query: 174 LGELIASKSPVAVQGTKKTL 193
+ E +A+ S A++ TK L
Sbjct: 204 VAERLAAGSQTAIRWTKYAL 223
|
Length = 268 |
| >gnl|CDD|235632 PRK05869, PRK05869, enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 4e-15
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI + L ++ +IL +IF+AG D+ + +L + A+ R
Sbjct: 38 EIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLSAQEADTAARVR--------- 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q+++ ++ PKP ++A+ G +G G++L AAD R + + F E+ GL
Sbjct: 89 ---QQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSG 145
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160
+ RL R G S E+ F+ R +A EA GL+ ++
Sbjct: 146 DGMARLTRAAG-PSRAKELVFSGRFFDAEEALALGLIDEM 184
|
Length = 222 |
| >gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 5e-15
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 11/174 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + D++ + +IL++ F G D++ L L A L + +
Sbjct: 38 SLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGL---------FALPDAELIQWL 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ LE P P ++A++G +GGG + A D R A A L E +G+
Sbjct: 89 LFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGF 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIEL 174
G RLPR+IG + + E + ++ A +A + G V + + L A A++L
Sbjct: 149 GGTVRLPRVIGADNAL-EWIASGKENRAEDALKVGAVDAVV-TADKLGAAALQL 200
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714 |
| >gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 8e-15
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 16 RVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPK 75
R ++L+ G F AG DLS G + D A R++ + + PK
Sbjct: 52 RAVVLTHTGGTFCAGADLS---EAGGGGGDPYDAAVARA--REMTALLRAIVEL----PK 102
Query: 76 PVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSL 135
PVI+A+ G GG L+ A DI A ++ F L E IG+ + +L LPR+ +
Sbjct: 103 PVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRL--SPRA 160
Query: 136 VNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKK 191
T K AAEA GLV+ DD ++ +A L + SP + +K
Sbjct: 161 AARYYLTGEKFGAAEAARIGLVTAAADDVDAAVA---ALLADLRRGSPQGLAESKA 213
|
Length = 260 |
| >gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 2e-14
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ E FD+++++ +V+IL+ F G G+LSL +
Sbjct: 36 QLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQTGKGTFTEA----------- 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
S CP PVI+A+ G IGGG+ L ADI ++++ +T + G T +
Sbjct: 85 ----NLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGM 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA LP +G +L E+ TAR AE ++ G+ + E +L A+EL +A
Sbjct: 141 GATAILPEKLG-LALGQEMLLTARYYRGAELKKRGVPFPVLPRAE-VLEKALELARSLAE 198
Query: 181 KSPVAVQGTKKTLV 194
K ++ K LV
Sbjct: 199 KPRHSLVLLKDHLV 212
|
Length = 249 |
| >gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 6e-14
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++E+ +++L G+ F+AG D+ MLS E SK ++
Sbjct: 37 ELLQALKEVAESS-AHIVVLRGNGRGFSAGGDIKMMLSSNDE----------SKF-DGVM 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T + + +L PK ISA+HG G G+S+ AD A A + + IGL D
Sbjct: 85 NTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDG 144
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDD 163
G L + +G +I + +K+ A EA + GL+ ++
Sbjct: 145 GGHFFLQKRVGENK-AKQIIWEGKKLSATEALDLGLIDEVIGG 186
|
Length = 260 |
| >gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase) | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 8e-14
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 16/195 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
EI + D E+ + V+IL+ AG K F +G D Q++ S + R
Sbjct: 34 EIIQALDDAREDPDIGVVILTGAGDKAFCSGGD--------QKVRGDYGYIDDSGVHRLN 85
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ Q+ I + CPKPVI+ V+G IGGG L D+ A ++A F +G + D
Sbjct: 86 VLDVQRQIRT---CPKPVIAMVNGYAIGGGHVLHMMCDLTIAAENARFGQTGPKVG-SFD 141
Query: 120 VG-ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G + RI+G Q EI F R+ +A +A + GLV+ + L + I
Sbjct: 142 GGYGSSYMARIVG-QKKAREIWFLCRQYDAKQALDMGLVNTVV-PLADLEKETVRWCREI 199
Query: 179 ASKSPVAVQGTKKTL 193
KSP+A++ K L
Sbjct: 200 LQKSPMAIRMLKAAL 214
|
This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259 |
| >gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 2e-13
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 21/174 (12%)
Query: 7 DSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 66
++ + + RV+I++ G+ F G DLS + A L T+
Sbjct: 37 KQINADPKIRVVIVTGEGRAFCVGADLS---EFAPDFAID------------LRETFYPI 81
Query: 67 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRL 126
I + K ISA++G G + + + D ++A++D F +GL +D G L
Sbjct: 82 IREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFL 141
Query: 127 PRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
++ G + EI + A EA GL+ K+ +D L+ A E+ I++
Sbjct: 142 LKLTGQRFY--EILVLGGEFTAEEAERWGLL-KISEDP---LSDAEEMANRISN 189
|
Length = 248 |
| >gnl|CDD|215151 PLN02267, PLN02267, enoyl-CoA hydratase/isomerase family protein | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 2e-13
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 17 VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKP 76
V+I +A GK F+ G DL A+ A L ++ + ++ L P P
Sbjct: 47 VLITTAEGKFFSNGFDL--------AWAQAAGSAPSR--LHLMVAKLRPLVADLISLPMP 96
Query: 77 VISAVHGACIGGGMSLITAADIRYATKDAWFT-LKEVDIGLTADVGALQRLPRIIGNQSL 135
I+AV G G L + D KD + EVDIGL + L IG+ +
Sbjct: 97 TIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAA 156
Query: 136 VNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
++ A K+ A EA E G+V +D E + A+ LGE +A++
Sbjct: 157 RRDVLLRAAKLTAEEAVEMGIVDSAHDSAEETVEAAVRLGEELAAR 202
|
Length = 239 |
| >gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 7e-13
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGML--SLGQEIAEQEDVARKSKILRK 58
E+ + D+L +++ V++L+ AG ++AG+DL + Q QE + R++ +
Sbjct: 39 EMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWR 98
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+ YQK P I+ V+G C GGG S + A D+ A +A F L E++ G+
Sbjct: 99 RLRWYQK----------PTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPP 148
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G + + +G++ + I T +A E GLV++ L A EL +
Sbjct: 149 GGGVSKAMADTVGHRDALYYI-MTGETFTGRKAAEMGLVNESV-PLAQLRARTRELAAKL 206
Query: 179 ASKSPVAVQGTKKTLVFSRD----------HAVEEGLNQVDKE 211
K+PV ++ K R+ +A E N +D E
Sbjct: 207 LEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLDPE 249
|
Length = 275 |
| >gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 9e-13
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 7 DSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE-----DVARKSKILRKLIT 61
D + + R ++L G+ F+AG DL+ M Q+ A+ + D AR+ L +L+
Sbjct: 43 DQVQSDASLRFLLLRGRGRHFSAGADLAWM----QQSADLDYNTNLDDARE---LAELMY 95
Query: 62 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG 121
+L R P ++ V GA GG + LI+ D+ DA F L EV IGL V
Sbjct: 96 -------NLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVI 148
Query: 122 ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
+ + + IG ++ A TA + + ARE GL+++ Y E L A +
Sbjct: 149 S-PFVVKAIGERA-ARRYALTAERFDGRRARELGLLAESYPAAE-LEAQVEAWIANLLLN 205
Query: 182 SPVAVQGTKKTL 193
SP A++ +K L
Sbjct: 206 SPQALRASKDLL 217
|
Length = 265 |
| >gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 3e-12
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ E + +++ +II+ AG+ F+AG DL + +V + L I
Sbjct: 42 LLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRESDDSCLEVVYRMYWLCYHI 101
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
TY+K ++ VHG +GGG L+ R T+ F E +G D
Sbjct: 102 HTYKK----------TQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDC 151
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL 156
G L R+ G+ L +A T ++ E CGL
Sbjct: 152 GFSYILSRLPGH--LGEYLALTGARLNGKEMVACGL 185
|
Length = 379 |
| >gnl|CDD|181386 PRK08321, PRK08321, naphthoate synthase; Validated | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 9e-12
Identities = 52/160 (32%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 34 SGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLI 93
G + A+ D AR R I Q+ I + PK VI+ V G GGG SL
Sbjct: 101 DGYQYAEGDEADTVDPARAG---RLHILEVQRLIRFM---PKVVIAVVPGWAAGGGHSLH 154
Query: 94 TAADIRYATKD-AWFTLKEVDIGLTADVGALQR------LPRIIGNQSLVNEIAFTARKI 146
D+ A+++ A F K+ D ADVG+ L R +G Q EI F R
Sbjct: 155 VVCDLTLASREHARF--KQTD----ADVGSFDGGYGSAYLARQVG-QKFAREIFFLGRTY 207
Query: 147 EAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAV 186
A EA + G V+ + E L A+E I KSP A+
Sbjct: 208 SAEEAHDMGAVNAVVPHAE-LETEALEWAREINGKSPTAM 246
|
Length = 302 |
| >gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 7e-11
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
F + ++ V +L AG F AG DL ++G + + +
Sbjct: 39 FRAFDADDAASVAVLWGAGGTFCAGADLK---AVGTGRGNRLHPSGDGPM---------- 85
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQR 125
S + R KPVI+AV G + GG+ L D+R A +DA F + G+ G R
Sbjct: 86 GPSRM-RLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVR 144
Query: 126 LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
LPR+IG S ++ T R ++A EA GL +++ ++ A A EL +A+
Sbjct: 145 LPRLIG-HSRAMDLILTGRPVDADEALAIGLANRVVPKGQARAA-AEELAAELAA 197
|
Length = 254 |
| >gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 2e-10
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ F+ ++ VIIL+ G K F +G D + G +D R L L
Sbjct: 98 ELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGY--VGPDDAGR----LNVL 151
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
Q + R PKPVI+ V G +GGG L D+ A +A F +G + D
Sbjct: 152 DLQIQ-----IRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVG-SFD 205
Query: 120 VG-ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G + R++G Q E+ F AR A+EA + GLV+ + + L ++ I
Sbjct: 206 AGYGSSIMARLVG-QKKAREMWFLARFYTASEALKMGLVNTVVPL-DELEGETVKWCREI 263
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEG 204
SP A++ K L +A ++G
Sbjct: 264 LRNSPTAIRVLKSAL-----NAADDG 284
|
Length = 327 |
| >gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA hydratase | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 5e-10
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 11 ENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRKLITTYQKSIS 68
E+ R ++L A G F S G +AE + A L KL+ S
Sbjct: 41 EDSALRAVLLDAEGPHF----------SFGASVAEHMPDQCAAMLASLHKLVIAMLDS-- 88
Query: 69 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPR 128
P P++ AV G C+GGG+ + A ++ +A DA E+ +G+ A + R
Sbjct: 89 -----PVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPAASCLLPER 143
Query: 129 IIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKES 166
+ + ++ ++ R I+ AE GL + + +D E+
Sbjct: 144 M--GRVAAEDLLYSGRSIDGAEGARIGLANAVAEDPEN 179
|
This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. Length = 251 |
| >gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-09
Identities = 52/192 (27%), Positives = 72/192 (37%), Gaps = 46/192 (23%)
Query: 16 RVIILSAAGKIFTAGLDLS----GMLSLG---------QEIAEQEDVARKSKILRKLITT 62
VI++S AGK F AG DLS G S G Q + D I ++++
Sbjct: 56 HVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSR 115
Query: 63 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA---- 118
+ + SL KP ++ VHG C+ GG + D A DA IG
Sbjct: 116 FVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDA-------KIGYPPTRVW 168
Query: 119 ----------DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLL 168
+G QR R++ FT I A+A E GL + +E L
Sbjct: 169 GVPATGMWAYRLGP-QRAKRLL----------FTGDCITGAQAAEWGLAVEAVPPEE-LD 216
Query: 169 AGAIELGELIAS 180
L E IA+
Sbjct: 217 ERTERLVERIAA 228
|
Length = 302 |
| >gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 2e-09
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 11 ENEECRVIILSAAGKIFTAGLDLSGML-------SLGQEIAEQEDVARKSKILRKLITTY 63
++ R + F+AG D+ L S G EI + L L
Sbjct: 47 ADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGTSFGSEILD---------FLIALAEA- 96
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGAL 123
KP++S V G IG G ++ D+ +A+ + F VD+ L + G+
Sbjct: 97 ----------EKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSS 146
Query: 124 QRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSP 183
PR++G+Q +A A A+E GL+ K+ D+ E++ A ++ E +A+K P
Sbjct: 147 LLAPRLMGHQRAFALLAL-GEGFSAEAAQEAGLIWKIVDE-EAVEAETLKAAEELAAKPP 204
Query: 184 VAVQGTKKTLVFSRDHAVEEGLNQVDKESK 213
A+Q + + R E+ L ++D+E+K
Sbjct: 205 QALQIARDLMRGPR----EDILARIDEEAK 230
|
Length = 251 |
| >gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 6e-09
Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 35/233 (15%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
++S EN + +++ +G+ F +G D+ +SL I E + + K
Sbjct: 78 YESWEENPDIGFVLMKGSGRAFCSGADV---VSLYHLINEG-----NVEECKLFFENLYK 129
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA--- 122
+ KP ++ + G +G G + R T F EV +G D GA
Sbjct: 130 FVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYY 189
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL----------------VSKLYDDKES 166
L RLP +G +A T +K+ E CGL + KL D +
Sbjct: 190 LSRLPGYLGEY-----LALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPA 244
Query: 167 LLAGAIE-LGELI-ASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCD 217
++ ++ G+L+ KS V + F D VEE + ++ E+ + D
Sbjct: 245 VIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHD-TVEEIIEALENEAASSYD 296
|
Length = 407 |
| >gnl|CDD|236373 PRK09076, PRK09076, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 6e-09
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 77 VISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLV 136
I+A++G +GGG+ A DIR A + A L E +GL G Q LP ++G +
Sbjct: 98 SIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVG-EGWA 156
Query: 137 NEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLV 194
+ +++AA A GLV ++ + E+ A A+ L + +A++SP AV KTL+
Sbjct: 157 KRMILCGERVDAATALRIGLVEEVVEKGEAREA-ALALAQKVANQSPSAV-AACKTLI 212
|
Length = 258 |
| >gnl|CDD|235938 PRK07112, PRK07112, polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 7e-09
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 15/169 (8%)
Query: 2 IGECFDSLSENEE-CRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
I EC D L E +++L ++F G D S + ++ ++ L L
Sbjct: 33 IAECMDVLDRCEHAATIVVLEGLPEVFCFGADFSAI---AEKPDAGRADLIDAEPLYDLW 89
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL-TAD 119
L P I+ V G GG+ + A+DI A + A F+L E+ GL A
Sbjct: 90 HR-------LATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPAC 142
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLL 168
V L L R IG Q + + + + A +A GLV + ++LL
Sbjct: 143 V--LPFLIRRIGTQK-AHYMTLMTQPVTAQQAFSWGLVDAYGANSDTLL 188
|
Length = 255 |
| >gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 8e-09
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE---DVARKSKILR 57
EI +++ +VI+L AG+ F+ G D G E + D + ++
Sbjct: 36 EIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVT 95
Query: 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA 105
T + ++ R KPVI+ VHG C+GG ADI A+ DA
Sbjct: 96 ARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDA 143
|
Length = 298 |
| >gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG---KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILR 57
E+ + F ++ VI+L+ G K F +G D G + + I R
Sbjct: 50 EMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDG-------IPR 102
Query: 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG-L 116
+ Q+ I + PKPVI+ V G IGGG L D+ A +A F +G
Sbjct: 103 LNVLDLQRLIRT---MPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSF 159
Query: 117 TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G+ L RI+G Q EI F R+ +A EA + GLV+ + L ++
Sbjct: 160 DGGYGS-SYLARIVG-QKKAREIWFLCRQYDAEEALDMGLVNTVV-PHADLEKETVQWAR 216
Query: 177 LIASKSPVAVQGTK 190
+ +KSP A++ K
Sbjct: 217 EMLAKSPTALRMLK 230
|
Length = 282 |
| >gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 1e-08
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 68 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG-ALQRL 126
S++ PKPVI+ V G IGGG L+T D+ A++ A F +G + D G L
Sbjct: 88 SAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVG-SVDPGYGTALL 146
Query: 127 PRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAV 186
R++G + EI + R+ A EA GLV+ + + L A + + I KSP A+
Sbjct: 147 ARVVGEKK-AREIWYLCRRYTAQEALAMGLVNAVV-PHDQLDAEVQKWCDEIVEKSPTAI 204
Query: 187 QGTKKTLVFSRDHAVEEGL 205
K++ F+ D A + G+
Sbjct: 205 AIAKRS--FNMDTAHQRGI 221
|
Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256 |
| >gnl|CDD|180958 PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 1e-08
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ + F +++ VIIL+ AG K F +G D Q++ + R
Sbjct: 44 EMIDAFADARDDDNIGVIILTGAGDKAFCSGGD--------QKVRGYGGYVDDDGVPRLN 95
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWF--TLKEV---DI 114
+ Q+ I + CPKPVI+ V G IGGG L D+ A +A F T +V D
Sbjct: 96 VLDLQRLIRT---CPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDG 152
Query: 115 GLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL--YDDKESLLAGAI 172
G A L RI+G Q EI F R+ +A EA + GLV+ + D E +
Sbjct: 153 GYGASY-----LARIVG-QKKAREIWFLCRQYDAQEALDMGLVNTVVPLADLE---KETV 203
Query: 173 ELGELIASKSPVAV 186
+ SP+A+
Sbjct: 204 RWCREMLQNSPMAL 217
|
Length = 273 |
| >gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase | Back alignment and domain information |
|---|
Score = 54.0 bits (129), Expect = 2e-08
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 32/166 (19%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLS--------GMLSLGQEIAEQEDVARKSKI 55
+ F + E+ +++IL G+ F AG D++ G LG E +
Sbjct: 43 QLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDE------YM 96
Query: 56 LRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 115
L ++ TY K+ +S ++G +GGG + R AT++ F + E +G
Sbjct: 97 LNYVMATYSKA----------QVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALG 146
Query: 116 LTADVGA---LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158
L DVGA L RLP G + T +++ AE CGL +
Sbjct: 147 LFPDVGASYFLSRLPGFFGEY-----VGLTGARLDGAEMLACGLAT 187
|
Length = 381 |
| >gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 2e-06
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 74 PKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA---LQRLPRII 130
PKP I+ + G +GGG+ + R T+ + E IG DVG L R P +
Sbjct: 100 PKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGAL 159
Query: 131 GNQSLVNEIAFTARKIEAAEARECGL 156
G +A T +I AA+A GL
Sbjct: 160 GTY-----LALTGARISAADALYAGL 180
|
Length = 342 |
| >gnl|CDD|235744 PRK06213, PRK06213, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 26/180 (14%)
Query: 17 VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKP 76
V++++ IF+ G DL M S G + A L+T L PKP
Sbjct: 47 VVVITGQPGIFSGGFDLKVMTS-GAQAA------------IALLTAGSTLARRLLSHPKP 93
Query: 77 VISAVHGACIGGGMSLITAADIRYATKDAWFT--LKEVDIGLTADVGAL----QRLPRII 130
VI A G I G L+ +AD R F L EV IG+T A+ RL
Sbjct: 94 VIVACTGHAIAKGAFLLLSADYRIGV-HGPFKIGLNEVAIGMTMPHAAIELARDRLTPSA 152
Query: 131 GNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTK 190
++++N A + EA G + ++ E LLA A +A + A TK
Sbjct: 153 FQRAVIN-----AEMFDPEEAVAAGFLDEVV-PPEQLLARAQAAARELAGLNMGAHAATK 206
|
Length = 229 |
| >gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 3e-05
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 10/160 (6%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
+ + E+ +++ +G+ F AG D+ + L + + +R+ ++
Sbjct: 73 YKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDA--------IREFFSSLYS 124
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQR 125
I L KP ++ ++G +GGG + R AT F E IG D GA
Sbjct: 125 FIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFN 184
Query: 126 LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKE 165
L + G L + T K+ AE CGL + +E
Sbjct: 185 LSHLPGR--LGEYLGLTGLKLSGAEMLACGLATHYIRSEE 222
|
Length = 401 |
| >gnl|CDD|215635 PLN03214, PLN03214, probable enoyl-CoA hydratase/isomerase; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 7e-05
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 17/178 (9%)
Query: 24 GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHG 83
G +F +GL + + G +IAE + + T + L R + A+ G
Sbjct: 58 GVVFASGLRRD-VFTAGNDIAELYAPKTSAARYAEFWLTQTTFLVRLLRSRLATVCAIRG 116
Query: 84 ACIGGGMSLITAADIRYATKDAWFTLKEVDIGL-TADVGALQRLPRIIGNQSLVNEIAFT 142
AC GG ++ D R T + L EV +G+ A + R+I + + +
Sbjct: 117 ACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVID-RKVAESLLLR 175
Query: 143 ARKIEAAEARECGLV------SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLV 194
R + AEA++ GL+ + L + S + A+ K P A + K L+
Sbjct: 176 GRLVRPAEAKQLGLIDEVVPAAALMEAAASAMERAL--------KLPSAARAATKALL 225
|
Length = 278 |
| >gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 5e-04
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 57 RKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL 116
R+ + + +S++ C KPVI V+G IGGG + AAD A A F G
Sbjct: 107 RQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGS 166
Query: 117 TADVGALQRLPRIIG-NQSLVNEIA---FTARK 145
GA LP +IG Q++V+ ++A K
Sbjct: 167 APIGGATDFLPLMIGCEQAMVSGTLCEPWSAHK 199
|
Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 360 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 275 | |||
| PLN02157 | 401 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 100.0 | |
| PLN02988 | 381 | 3-hydroxyisobutyryl-CoA hydrolase | 100.0 | |
| PRK05980 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PLN02851 | 407 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 100.0 | |
| PRK05862 | 257 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK09076 | 258 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06143 | 256 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06142 | 272 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PLN02600 | 251 | enoyl-CoA hydratase | 100.0 | |
| PLN02664 | 275 | enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA | 100.0 | |
| PRK08150 | 255 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07658 | 257 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05809 | 260 | 3-hydroxybutyryl-CoA dehydratase; Validated | 100.0 | |
| PRK09245 | 266 | enoyl-CoA hydratase; Provisional | 100.0 | |
| KOG1680|consensus | 290 | 100.0 | ||
| PRK07657 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK09674 | 255 | enoyl-CoA hydratase-isomerase; Provisional | 100.0 | |
| PRK08139 | 266 | enoyl-CoA hydratase; Validated | 100.0 | |
| PRK09120 | 275 | p-hydroxycinnamoyl CoA hydratase/lyase; Validated | 100.0 | |
| TIGR02280 | 256 | PaaB1 phenylacetate degradation probable enoyl-CoA | 100.0 | |
| PRK08138 | 261 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07511 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06563 | 255 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08258 | 277 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07260 | 255 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06127 | 269 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08140 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08252 | 254 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05995 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07799 | 263 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07468 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07659 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07327 | 268 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK03580 | 261 | carnitinyl-CoA dehydratase; Provisional | 100.0 | |
| PRK05981 | 266 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06494 | 259 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06688 | 259 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05870 | 249 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07938 | 249 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06023 | 251 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05674 | 265 | gamma-carboxygeranoyl-CoA hydratase; Validated | 100.0 | |
| PLN02888 | 265 | enoyl-CoA hydratase | 100.0 | |
| PRK05864 | 276 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06210 | 272 | enoyl-CoA hydratase; Provisional | 100.0 | |
| COG1024 | 257 | CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi | 100.0 | |
| PRK07509 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| KOG1681|consensus | 292 | 100.0 | ||
| PRK08259 | 254 | enoyl-CoA hydratase; Provisional | 100.0 | |
| TIGR01929 | 259 | menB naphthoate synthase (dihydroxynaphthoic acid | 100.0 | |
| PLN03214 | 278 | probable enoyl-CoA hydratase/isomerase; Provisiona | 100.0 | |
| PF00378 | 245 | ECH: Enoyl-CoA hydratase/isomerase family; InterPr | 100.0 | |
| PRK06495 | 257 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06144 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| TIGR03189 | 251 | dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy | 100.0 | |
| PRK07110 | 249 | polyketide biosynthesis enoyl-CoA hydratase; Valid | 100.0 | |
| TIGR03210 | 256 | badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb | 100.0 | |
| PRK06190 | 258 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07396 | 273 | dihydroxynaphthoic acid synthetase; Validated | 100.0 | |
| PRK08260 | 296 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06072 | 248 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07827 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK12478 | 298 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PLN02874 | 379 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 100.0 | |
| PRK11423 | 261 | methylmalonyl-CoA decarboxylase; Provisional | 100.0 | |
| PRK07854 | 243 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05869 | 222 | enoyl-CoA hydratase; Validated | 100.0 | |
| PLN02921 | 327 | naphthoate synthase | 100.0 | |
| PRK05617 | 342 | 3-hydroxyisobutyryl-CoA hydrolase; Provisional | 100.0 | |
| PRK08321 | 302 | naphthoate synthase; Validated | 100.0 | |
| KOG1684|consensus | 401 | 100.0 | ||
| PRK07112 | 255 | polyketide biosynthesis enoyl-CoA hydratase; Valid | 100.0 | |
| PRK08272 | 302 | enoyl-CoA hydratase; Provisional | 100.0 | |
| KOG1679|consensus | 291 | 100.0 | ||
| TIGR03222 | 546 | benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p | 100.0 | |
| PRK08788 | 287 | enoyl-CoA hydratase; Validated | 100.0 | |
| PRK08290 | 288 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08184 | 550 | benzoyl-CoA-dihydrodiol lyase; Provisional | 100.0 | |
| PRK06213 | 229 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK11730 | 715 | fadB multifunctional fatty acid oxidation complex | 100.0 | |
| TIGR03200 | 360 | dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy | 100.0 | |
| PRK11154 | 708 | fadJ multifunctional fatty acid oxidation complex | 100.0 | |
| TIGR02440 | 699 | FadJ fatty oxidation complex, alpha subunit FadJ. | 100.0 | |
| PLN02267 | 239 | enoyl-CoA hydratase/isomerase family protein | 100.0 | |
| TIGR02437 | 714 | FadB fatty oxidation complex, alpha subunit FadB. | 100.0 | |
| KOG0016|consensus | 266 | 100.0 | ||
| TIGR02441 | 737 | fa_ox_alpha_mit fatty acid oxidation complex, alph | 100.0 | |
| cd06558 | 195 | crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy | 100.0 | |
| TIGR03222 | 546 | benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p | 100.0 | |
| COG0447 | 282 | MenB Dihydroxynaphthoic acid synthase [Coenzyme me | 100.0 | |
| PRK08184 | 550 | benzoyl-CoA-dihydrodiol lyase; Provisional | 100.0 | |
| KOG1682|consensus | 287 | 99.98 | ||
| cd07014 | 177 | S49_SppA Signal peptide peptidase A. Signal peptid | 99.85 | |
| cd07020 | 187 | Clp_protease_NfeD_1 Nodulation formation efficienc | 99.82 | |
| cd07019 | 211 | S49_SppA_1 Signal peptide peptidase A (SppA), a se | 99.68 | |
| TIGR00705 | 584 | SppA_67K signal peptide peptidase SppA, 67K type. | 99.55 | |
| cd00394 | 161 | Clp_protease_like Caseinolytic protease (ClpP) is | 99.55 | |
| cd07016 | 160 | S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP- | 99.54 | |
| cd07022 | 214 | S49_Sppa_36K_type Signal peptide peptidase A (SppA | 99.48 | |
| cd07023 | 208 | S49_Sppa_N_C Signal peptide peptidase A (SppA), a | 99.48 | |
| TIGR00706 | 207 | SppA_dom signal peptide peptidase SppA, 36K type. | 99.46 | |
| cd07018 | 222 | S49_SppA_67K_type Signal peptide peptidase A (SppA | 99.37 | |
| cd07021 | 178 | Clp_protease_NfeD_like Nodulation formation effici | 99.35 | |
| cd07015 | 172 | Clp_protease_NfeD Nodulation formation efficiency | 98.95 | |
| PRK10949 | 618 | protease 4; Provisional | 98.84 | |
| cd07013 | 162 | S14_ClpP Caseinolytic protease (ClpP) is an ATP-de | 98.74 | |
| COG0616 | 317 | SppA Periplasmic serine proteases (ClpP class) [Po | 98.6 | |
| PRK12319 | 256 | acetyl-CoA carboxylase subunit alpha; Provisional | 98.53 | |
| PRK00277 | 200 | clpP ATP-dependent Clp protease proteolytic subuni | 98.5 | |
| PRK12553 | 207 | ATP-dependent Clp protease proteolytic subunit; Re | 98.49 | |
| cd07017 | 171 | S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP- | 98.4 | |
| PRK14512 | 197 | ATP-dependent Clp protease proteolytic subunit; Pr | 98.37 | |
| CHL00198 | 322 | accA acetyl-CoA carboxylase carboxyltransferase al | 98.36 | |
| PRK11778 | 330 | putative inner membrane peptidase; Provisional | 98.35 | |
| PRK05724 | 319 | acetyl-CoA carboxylase carboxyltransferase subunit | 98.26 | |
| TIGR00513 | 316 | accA acetyl-CoA carboxylase, carboxyl transferase, | 98.26 | |
| PLN03230 | 431 | acetyl-coenzyme A carboxylase carboxyl transferase | 98.25 | |
| PLN03229 | 762 | acetyl-coenzyme A carboxylase carboxyl transferase | 98.15 | |
| PF00574 | 182 | CLP_protease: Clp protease; InterPro: IPR001907 In | 98.13 | |
| TIGR00493 | 191 | clpP ATP-dependent Clp protease, proteolytic subun | 98.09 | |
| KOG1683|consensus | 380 | 98.05 | ||
| CHL00028 | 200 | clpP ATP-dependent Clp protease proteolytic subuni | 98.03 | |
| PF13766 | 118 | ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD | 97.96 | |
| PF01343 | 154 | Peptidase_S49: Peptidase family S49 peptidase clas | 97.94 | |
| TIGR00705 | 584 | SppA_67K signal peptide peptidase SppA, 67K type. | 97.83 | |
| TIGR03133 | 274 | malonate_beta malonate decarboxylase, beta subunit | 97.83 | |
| PRK07189 | 301 | malonate decarboxylase subunit beta; Reviewed | 97.82 | |
| PRK14514 | 221 | ATP-dependent Clp protease proteolytic subunit; Pr | 97.79 | |
| PRK12551 | 196 | ATP-dependent Clp protease proteolytic subunit; Re | 97.79 | |
| PF01972 | 285 | SDH_sah: Serine dehydrogenase proteinase; InterPro | 97.69 | |
| PRK14513 | 201 | ATP-dependent Clp protease proteolytic subunit; Pr | 97.6 | |
| TIGR03134 | 238 | malonate_gamma malonate decarboxylase, gamma subun | 97.43 | |
| PRK10949 | 618 | protease 4; Provisional | 97.4 | |
| COG0740 | 200 | ClpP Protease subunit of ATP-dependent Clp proteas | 97.22 | |
| PRK05654 | 292 | acetyl-CoA carboxylase subunit beta; Validated | 97.21 | |
| TIGR00515 | 285 | accD acetyl-CoA carboxylase, carboxyl transferase, | 97.16 | |
| COG0825 | 317 | AccA Acetyl-CoA carboxylase alpha subunit [Lipid m | 97.1 | |
| PRK12552 | 222 | ATP-dependent Clp protease-like protein; Reviewed | 96.92 | |
| PF01039 | 493 | Carboxyl_trans: Carboxyl transferase domain; Inter | 96.85 | |
| CHL00174 | 296 | accD acetyl-CoA carboxylase beta subunit; Reviewed | 96.7 | |
| COG1030 | 436 | NfeD Membrane-bound serine protease (ClpP class) [ | 96.69 | |
| TIGR01117 | 512 | mmdA methylmalonyl-CoA decarboxylase alpha subunit | 96.4 | |
| PF13766 | 118 | ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD | 96.22 | |
| COG0777 | 294 | AccD Acetyl-CoA carboxylase beta subunit [Lipid me | 96.06 | |
| TIGR01117 | 512 | mmdA methylmalonyl-CoA decarboxylase alpha subunit | 95.98 | |
| PLN02820 | 569 | 3-methylcrotonyl-CoA carboxylase, beta chain | 95.86 | |
| PLN02820 | 569 | 3-methylcrotonyl-CoA carboxylase, beta chain | 94.66 | |
| COG4799 | 526 | Acetyl-CoA carboxylase, carboxyltransferase compon | 94.64 | |
| PLN02874 | 379 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 93.13 | |
| PF01039 | 493 | Carboxyl_trans: Carboxyl transferase domain; Inter | 92.57 | |
| PLN02988 | 381 | 3-hydroxyisobutyryl-CoA hydrolase | 90.77 | |
| PLN02851 | 407 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 89.81 | |
| PLN02157 | 401 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 88.49 | |
| KOG1684|consensus | 401 | 86.02 | ||
| PF02601 | 319 | Exonuc_VII_L: Exonuclease VII, large subunit; Inte | 83.57 |
| >PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-50 Score=372.60 Aligned_cols=247 Identities=19% Similarity=0.288 Sum_probs=202.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.|++|++|++|||+|.|++||+|+||+++...... + . ......++...+.+++.|.++|||+||+
T Consensus 68 ~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~--~--~----~~~~~~~~~~~~~l~~~i~~~pkPvIA~ 139 (401)
T PLN02157 68 RLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKR--G--S----PDAIREFFSSLYSFIYLLGTYLKPHVAI 139 (401)
T ss_pred HHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccc--c--c----hHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 477899999999999999999999999999999988642210 0 0 0112334445556778899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|+|||+++|++|++|++++|+|++| . .+++|++||++++|+||+++||||++
T Consensus 140 v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G-~-~a~~L~LTG~~i~A~eA~~~GLv~~v 217 (401)
T PLN02157 140 LNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPG-R-LGEYLGLTGLKLSGAEMLACGLATHY 217 (401)
T ss_pred EeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhh-H-HHHHHHHcCCcCCHHHHHHcCCceEE
Confidence 999999999999999999999999999999999999999999999999999 3 79999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchH-----------------Hh
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNC-----------------NK 223 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----------------~e 223 (275)
||+ +++ +++.+++.+++..+|.++..+|+.++... .+....+..+.......+.++++ +.
T Consensus 218 Vp~-~~l-~~~~~~~~~i~~~~p~av~~~k~~~~~~~-~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~~kr~~~wa 294 (401)
T PLN02157 218 IRS-EEI-PVMEEQLKKLLTDDPSVVESCLEKCAEVA-HPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEAGRRKDTWC 294 (401)
T ss_pred eCH-hHH-HHHHHHHHHHHcCCHHHHHHHHHHHhccc-CCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhhcccchHHH
Confidence 997 788 67779999999999999999999987652 22323333322222223333333 33
Q ss_pred ccccccccccCCcchhhHHHHHhccCccChHHHHHHH
Q psy14406 224 GVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDL 260 (275)
Q Consensus 224 ~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~ 260 (275)
.-+...++++||+|++||++++++++.+|+++||+..
T Consensus 295 ~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e 331 (401)
T PLN02157 295 ITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIRE 331 (401)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHH
Confidence 3456678899999999999999999999999999863
|
|
| >PLN02988 3-hydroxyisobutyryl-CoA hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=352.27 Aligned_cols=245 Identities=20% Similarity=0.300 Sum_probs=197.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++|+.|++|++|||+|.|++||+|+|++++...... . .......++...+.+.+.+.++|||+||+
T Consensus 40 ~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~-----~---~~~~~~~~f~~~~~l~~~i~~~pKPvIa~ 111 (381)
T PLN02988 40 RLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQ-----G---NWRLGANFFSDEYMLNYVMATYSKAQVSI 111 (381)
T ss_pred HHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcc-----c---chhHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 478899999999999999999999999999999987532110 0 00011223333345567889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|+|||+++|++|++|++++|+|++|. .+++|++||++++|.||+++||||++
T Consensus 112 v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~--~~~~l~LTG~~i~a~eA~~~GLv~~v 189 (381)
T PLN02988 112 LNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGF--FGEYVGLTGARLDGAEMLACGLATHF 189 (381)
T ss_pred ecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHH--HHHHHHHcCCCCCHHHHHHcCCceEe
Confidence 9999999999999999999999999999999999999999999999999994 68999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh---cCC----------------HHHHHHHHHHHhhcccCCchH
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSR---DHA----------------VEEGLNQVDKESKNGCDRRNC 221 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~---~~~----------------~~~~l~~~~~~~~~~~~~~~~ 221 (275)
||+ +++.+.+.+++ +++..+|.++..+|+.++... ..+ +++.++..... .....+.
T Consensus 190 v~~-~~l~~~~~~la-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~i~~~L~~~---~~~~~~~ 264 (381)
T PLN02988 190 VPS-TRLTALEADLC-RIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEEIISALERE---ATQEADG 264 (381)
T ss_pred cCH-hHHHHHHHHHH-HhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHHHHHHHHhh---ccccccH
Confidence 997 88999888888 778888888888888876432 111 22222221110 0001234
Q ss_pred HhccccccccccCCcchhhHHHHHhccCccChHHHHHHH
Q psy14406 222 NKGVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDL 260 (275)
Q Consensus 222 ~e~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~ 260 (275)
+..-+...++++||+|++||++++++++.+|+++||+..
T Consensus 265 wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e 303 (381)
T PLN02988 265 WISATIQALKKASPASLKISLRSIREGRLQGVGQCLIRE 303 (381)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 566788899999999999999999999999999999863
|
|
| >PRK05980 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=331.28 Aligned_cols=224 Identities=28% Similarity=0.413 Sum_probs=199.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++++.++.|++|++|||+|.| ++||+|+|++++...... . .......+...++.++.++..+||||||
T Consensus 34 ~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~l~~~~kPvIa 105 (260)
T PRK05980 34 RLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAA-----G---ADVALRDFVRRGQAMTARLEAFPKPVIA 105 (260)
T ss_pred HHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccc-----c---chhhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999 799999999987432110 0 0011233444556678889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++++++|++++++||+++||||+
T Consensus 106 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 184 (260)
T PRK05980 106 AVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGR-KRALELLLTGDAFSAERALEIGLVNA 184 (260)
T ss_pred EEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCH-HHHHHHHHcCCccCHHHHHHcCCCCc
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++|+ +++.+++.++++++++.+|.+++.+|+.++.....++++.+..+.......+.++++++++.+++.+|+.
T Consensus 185 vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~~kr~p 258 (260)
T PRK05980 185 VVPH-EELLPAARALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAGSADLREGLAAWIERRRP 258 (260)
T ss_pred ccCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhccCCC
Confidence 9997 8999999999999999999999999999999888889999999988888889999999999999887753
|
|
| >PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=346.80 Aligned_cols=245 Identities=20% Similarity=0.285 Sum_probs=194.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.|++|++|++|||+|.|++||+|+|++++.+.... .+ ......++...+.+.+.|.++|||+||+
T Consensus 73 eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~----~~----~~~~~~~f~~~~~l~~~i~~~pKPvIA~ 144 (407)
T PLN02851 73 RLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINE----GN----VEECKLFFENLYKFVYLQGTYLKPNVAI 144 (407)
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccc----cc----hHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999988642210 00 0123445667788888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|+|||+++|++|++|++++|+|++|. .+++|++||++++|+||+++||+|++
T Consensus 145 v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~--~g~~L~LTG~~i~a~eA~~~GLa~~~ 222 (407)
T PLN02851 145 MDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGY--LGEYLALTGQKLNGVEMIACGLATHY 222 (407)
T ss_pred EcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCH--HHHHHHHhCCcCCHHHHHHCCCceee
Confidence 9999999999999999999999999999999999999999999999999994 59999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHH------------------HHHhhhc-CCHHHHHHHHHHHhhcccCCchH
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKK------------------TLVFSRD-HAVEEGLNQVDKESKNGCDRRNC 221 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~------------------~l~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 221 (275)
||+ +++ +.+.+.+.++...++.++...-+ .|+..+. .++++.++..... .....+.
T Consensus 223 v~~-~~l-~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~---~~~~~~~ 297 (407)
T PLN02851 223 CLN-ARL-PLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENE---AASSYDE 297 (407)
T ss_pred cCH-hhH-HHHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCHHHHHHHHHhc---ccccchH
Confidence 997 777 56666666665555444433222 2222222 1344444443321 1111234
Q ss_pred HhccccccccccCCcchhhHHHHHhccCccChHHHHHHH
Q psy14406 222 NKGVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDL 260 (275)
Q Consensus 222 ~e~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~ 260 (275)
+...+...++++||+|++||++++++++.+|+++||+..
T Consensus 298 wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E 336 (407)
T PLN02851 298 WCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLARE 336 (407)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 566788999999999999999999999999999999863
|
|
| >PRK05862 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=329.68 Aligned_cols=217 Identities=28% Similarity=0.402 Sum_probs=195.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|+++|+|||+|.|++||+|+|++++..... . ..+...+..++.+|.++||||||+
T Consensus 35 ~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~-------~-------~~~~~~~~~~~~~l~~~~kpvIaa 100 (257)
T PRK05862 35 ELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSF-------M-------DVYKGDYITNWEKVARIRKPVIAA 100 (257)
T ss_pred HHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhccch-------h-------HHHHHHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999999999998753210 0 011122344677899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 101 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 179 (257)
T PRK05862 101 VAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGK-AKAMDLCLTGRMMDAAEAERAGLVSRV 179 (257)
T ss_pred EccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCH-HHHHHHHHhCCccCHHHHHHcCCCCEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.++++++++.+|.+++.+|+.++.....++++.++.+.......+.++++++++..+..+|+
T Consensus 180 v~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~~~~e~i~af~~kr~ 251 (257)
T PRK05862 180 VPA-DKLLDEALAAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFATEDQKEGMAAFVEKRK 251 (257)
T ss_pred eCH-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhccCC
Confidence 997 899999999999999999999999999999988888999999988888888899999999999987664
|
|
| >PRK09076 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-46 Score=329.25 Aligned_cols=221 Identities=23% Similarity=0.367 Sum_probs=197.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++++++++|+++++|||+|.| ++||+|+|++++..... . ....+...++.++.++.++||||||
T Consensus 33 ~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~~~------~------~~~~~~~~~~~~~~~l~~~~kPvIA 100 (258)
T PRK09076 33 ALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADGDK------A------VAREMARRFGEAFEALSAFRGVSIA 100 (258)
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhcCh------h------hHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999 79999999998743111 0 0112234456778889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++|+||+++||||+
T Consensus 101 av~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 179 (258)
T PRK09076 101 AINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGE-GWAKRMILCGERVDAATALRIGLVEE 179 (258)
T ss_pred EECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHCCCCce
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
++|+ +++.+++.+++++++..+|.+++.+|+.++.....++++.+..+.......+.+++++|++..+..+|+.+
T Consensus 180 vv~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~eg~~af~~kr~p~ 254 (258)
T PRK09076 180 VVEK-GEAREAALALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFDTEDQREGVNAFLEKRAPQ 254 (258)
T ss_pred ecCc-hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCCC
Confidence 9997 89999999999999999999999999999988777899999988888788889999999999998866543
|
|
| >PRK06143 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=328.89 Aligned_cols=218 Identities=27% Similarity=0.396 Sum_probs=195.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++||+|||+|.| ++||+|+|++++..... .....+...++.++..+.++||||||
T Consensus 38 ~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~kPvIA 105 (256)
T PRK06143 38 ALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQ------------ASAEAFISRLRDLCDAVRHFPVPVIA 105 (256)
T ss_pred HHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhcCh------------hhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999999 79999999998743211 01123445566788899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|+ |+.|++++|++++|+ .++++++++|++++|+||+++||||+
T Consensus 106 av~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 183 (256)
T PRK06143 106 RIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGW-ARTRWLLLTGETIDAAQALAWGLVDR 183 (256)
T ss_pred EECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCH-HHHHHHHHcCCcCCHHHHHHCCCcCe
Confidence 9999999999999999999999999999999999998 888889999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+||+ +++.+++.+++++++..||.+++.+|+.++.....++++.+..+.......+.++|+++++..+..+|+
T Consensus 184 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~e~~~af~ekr~ 256 (256)
T PRK06143 184 VVPL-AELDAAVERLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFLTGEPQRHMAAFLNRKR 256 (256)
T ss_pred ecCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhcChHHHHHHHHHHhhcC
Confidence 9997 899999999999999999999999999999988888999999888888888899999999998887663
|
|
| >PRK06142 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-46 Score=331.60 Aligned_cols=231 Identities=43% Similarity=0.702 Sum_probs=199.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++......... ............+...+++++..+..+||||||+
T Consensus 37 ~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAa 115 (272)
T PRK06142 37 ELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGK-DGLARPRTDLRREILRLQAAINAVADCRKPVIAA 115 (272)
T ss_pred HHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccc-cccccchHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999987531100000 0000001122333445567888899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|+++|++++|+||+++||||++
T Consensus 116 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~-~~a~~l~l~g~~~~a~eA~~~GLv~~v 194 (272)
T PRK06142 116 VQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGD-GHLRELALTGRDIDAAEAEKIGLVNRV 194 (272)
T ss_pred ecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCH-HHHHHHHHhCCCcCHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+++.+++.+++.+++++|+..||.+++.+|+.++.....++++.+..+..+....+.++|++||+.++..+|+
T Consensus 195 v~~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~~~d~~egv~af~~kr~ 267 (272)
T PRK06142 195 YDDADALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLPSKDLTEAIAAHMEKRP 267 (272)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCccHHHHHHHHhcCCC
Confidence 9854789999999999999999999999999999888888999999888888888899999999999988664
|
|
| >PLN02600 enoyl-CoA hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-46 Score=326.91 Aligned_cols=219 Identities=27% Similarity=0.459 Sum_probs=197.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.+++++++.|++||+|||+|.| ++||+|+|++++..... + ....+...++.++.++..+||||||
T Consensus 26 ~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~~~------~------~~~~~~~~~~~~~~~l~~~~kPvIA 93 (251)
T PLN02600 26 GLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMSP------S------EVQKFVNSLRSTFSSLEALSIPTIA 93 (251)
T ss_pred HHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhccCh------H------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999985 89999999998743211 0 1123344556778889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++++||+++||||+
T Consensus 94 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~-~~a~~l~ltg~~~~a~eA~~~Glv~~ 172 (251)
T PLN02600 94 VVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGR-SRAKELIFTGRRIGAREAASMGLVNY 172 (251)
T ss_pred EecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCH-HHHHHHHHhCCccCHHHHHHcCCCcE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+||+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.......+.++|++|++.++..+|+
T Consensus 173 vv~~-~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~ 245 (251)
T PLN02600 173 CVPA-GEAYEKALELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLKTKDRLEGLAAFAEKRK 245 (251)
T ss_pred eeCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCC
Confidence 9997 899999999999999999999999999999888888999999988888888899999999999988764
|
|
| >PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-46 Score=330.84 Aligned_cols=231 Identities=43% Similarity=0.686 Sum_probs=199.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.++.|+++++|||+|.|++||+|+|++++........ ..+..........+...+++++..|.++||||||+
T Consensus 39 ~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa 117 (275)
T PLN02664 39 EFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSS-SGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAA 117 (275)
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccc-cccchhhHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211000 00000001122344455567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .+++++++||++++|+||+++||||++
T Consensus 118 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 196 (275)
T PLN02664 118 IHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGY-GNAMELALTGRRFSGSEAKELGLVSRV 196 (275)
T ss_pred ECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCH-HHHHHHHHhCCCCCHHHHHHcCCCcee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+.+++.+.+.+++++|+..+|.+++.+|+.++.....++.+.++.+.......+.++|++|++..+..+|+
T Consensus 197 v~~~~~l~~~~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~ 269 (275)
T PLN02664 197 FGSKEDLDEGVRLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLVSDDLNEAVSAQIQKRK 269 (275)
T ss_pred eCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccChhHHHHHHHHhccCC
Confidence 9843789999999999999999999999999999888778999999888777778899999999999988764
|
|
| >PRK08150 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-46 Score=326.76 Aligned_cols=218 Identities=26% Similarity=0.392 Sum_probs=193.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++.++ +++|+|||||.|++||+|+|++++..... .. ...+...++.++.+|.++||||||+
T Consensus 33 ~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~~~-----~~-------~~~~~~~~~~~~~~l~~~~kPvIaa 98 (255)
T PRK08150 33 ALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRERDA-----GE-------GMHHSRRWHRVFDKIQYGRVPVIAA 98 (255)
T ss_pred HHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhccc-----hh-------HHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4778888886 89999999999999999999998753211 00 1122344567788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 99 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 177 (255)
T PRK08150 99 LHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGV-ARMTDMMLTGRVYDAQEGERLGLAQYL 177 (255)
T ss_pred ECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
||+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.+..+.......+.++|+++++..+..+|+.
T Consensus 178 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~~kr~p 250 (255)
T PRK08150 178 VPA-GEALDKAMELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQSAPEAKERLRAFLEKKAA 250 (255)
T ss_pred eCc-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhccCCC
Confidence 997 8999999999999999999999999999998888889999888877777778899999999988876643
|
|
| >PRK07658 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-46 Score=327.38 Aligned_cols=220 Identities=30% Similarity=0.506 Sum_probs=197.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++.|++|++|||+|.|++||+|+|++++..... .+ ....+....+.++.++..+||||||+
T Consensus 32 ~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~-----~~------~~~~~~~~~~~~~~~l~~~~kpvIAa 100 (257)
T PRK07658 32 ELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVTE-----AE------QATELAQLGQVTFERVEKFSKPVIAA 100 (257)
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccCc-----hh------hHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 00 11223344566788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++++||+++||||++
T Consensus 101 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 179 (257)
T PRK07658 101 IHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGK-AKALEMMLTSEPITGAEALKWGLVNGV 179 (257)
T ss_pred EcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHcCCcCee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|. +++.+++.+++++++..+|.+++.+|+.++.....++++.++.+...+...+.+++.++++..+..+|+
T Consensus 180 v~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~egi~af~~kr~ 251 (257)
T PRK07658 180 FPE-ETLLDDAKKLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFTSEDAKEGVQAFLEKRK 251 (257)
T ss_pred cCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCC
Confidence 997 899999999999999999999999999999888778999999988888888899999999999988654
|
|
| >PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-46 Score=326.61 Aligned_cols=220 Identities=31% Similarity=0.458 Sum_probs=197.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.+++++++.|+++++|||+|.| ++||+|+|++++..... + ....+....++++.++.++||||||
T Consensus 35 ~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~~------~------~~~~~~~~~~~~~~~l~~~~kPvIa 102 (260)
T PRK05809 35 ELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLNE------E------EGRKFGLLGNKVFRKLENLDKPVIA 102 (260)
T ss_pred HHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccCh------H------HHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 478899999999999999999999 99999999998753211 0 0112233445678889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++++||+++||||+
T Consensus 103 av~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 181 (260)
T PRK05809 103 AINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGP-GKAKELIYTGDMINAEEALRIGLVNK 181 (260)
T ss_pred EEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCH-HHHHHHHHhCCCCCHHHHHHcCCCCc
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++|+ +++.+.+.+++++++..||.+++.+|+.++.....++++.++.+.......+.++++++++..+..+|+.
T Consensus 182 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~egi~af~~~r~p 255 (260)
T PRK05809 182 VVEP-EKLMEEAKALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFSTEDQTEGMTAFVEKREK 255 (260)
T ss_pred ccCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCC
Confidence 9997 8999999999999999999999999999999888889999998888888888999999999999886643
|
|
| >PRK09245 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=329.22 Aligned_cols=226 Identities=28% Similarity=0.354 Sum_probs=196.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++.|++|++|||+|.|++||+|+|++++............ .....+...++.++.++.++||||||+
T Consensus 35 ~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~kpvIaa 109 (266)
T PRK09245 35 ALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPA-----DIRQGYRHGIQRIPLALYNLEVPVIAA 109 (266)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccch-----hHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 477899999999999999999999999999999987532110000000 001112233456778899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++|+||+++||||++
T Consensus 110 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 188 (266)
T PRK09245 110 VNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGM-ARAAEMAFTGDAIDAATALEWGLVSRV 188 (266)
T ss_pred ECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhH-HHHHHHHHcCCCcCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.+..+.......+.++|+++++..+..+|+
T Consensus 189 v~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~ 260 (266)
T PRK09245 189 VPA-DQLLPAARALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHHTADHREAVDAFLEKRP 260 (266)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHhHHHHHHHHHcCCC
Confidence 997 899999999999999999999999999999988878988888887777778899999999999887664
|
|
| >KOG1680|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-47 Score=323.74 Aligned_cols=219 Identities=31% Similarity=0.465 Sum_probs=196.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|..+++|+.++++||||.|++||+|.||+++..... .+. ....+.+.+..+.+.+||+||+
T Consensus 68 eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~-----~~~---------~~~~~~~~~~~~~~~~KPvIaa 133 (290)
T KOG1680|consen 68 ELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEF-----QDV---------SDGIFLRVWDLVSRLKKPVIAA 133 (290)
T ss_pred HHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhccc-----ccc---------ccccccchhhhhhhcccceeEe
Confidence 58899999999999999999999999999999999865221 010 0011222334444789999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|++.||+|||+++|+|++|+.++|++|.+|++.+|+|.+|. ++|+++++||++++++||+++|||++|
T Consensus 134 inG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~-s~Ale~~ltg~~~~AqeA~~~GlVn~V 212 (290)
T KOG1680|consen 134 INGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGK-SRALEMILTGRRLGAQEAKKIGLVNKV 212 (290)
T ss_pred eeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhCh-HHHHHHHHhcCcccHHHHHhCCceeEe
Confidence 9999999999999999999999999999999999999999999999999996 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
||. +++..+|.+++++|++.||.+++..|+.++.+.+.++.+.+..+...+...+..+|..||++.+..+|...
T Consensus 213 vp~-~~~l~eAv~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~~~d~~Eg~~~f~~kr~~~ 286 (290)
T KOG1680|consen 213 VPS-GDALGEAVKLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFATEDRLEGMTAFAEKRKPK 286 (290)
T ss_pred ecc-hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhhhHHHHHHHHHhcccCCcc
Confidence 998 89999999999999999999999999999999999999999999999888999999999999998776544
|
|
| >PRK07657 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-46 Score=326.38 Aligned_cols=219 Identities=31% Similarity=0.509 Sum_probs=198.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.+++++++.|+++++|||+|.| ++||+|+|++++..... .....+...++.++..+.++||||||
T Consensus 35 ~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~kPvIa 102 (260)
T PRK07657 35 ELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGMNE------------EQVRHAVSLIRTTMEMVEQLPQPVIA 102 (260)
T ss_pred HHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcCCh------------hhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999999 59999999998743211 01223345567778899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++++++|++++++||+++||||+
T Consensus 103 av~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 181 (260)
T PRK07657 103 AINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGV-GRAKELIYTGRRISAQEAKEIGLVEF 181 (260)
T ss_pred EEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCH-HHHHHHHHhCCCCCHHHHHHcCCCCe
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
++|+ +++.+++.+++++++..+|.+++.+|+.++.....++++.+..+.......+.++++++++..+..+|+
T Consensus 182 vv~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~~~r~ 254 (260)
T PRK07657 182 VVPA-HLLEEKAIEIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIPTKDRLEGLQAFKEKRK 254 (260)
T ss_pred ecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHhHHHHHHHHhcCCC
Confidence 9997 899999999999999999999999999999988888999999888888888899999999998887664
|
|
| >PRK09674 enoyl-CoA hydratase-isomerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=325.32 Aligned_cols=217 Identities=27% Similarity=0.413 Sum_probs=195.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++++++|++||+|||+|.|++||+|+|++++..... . ..+......++.++..+||||||+
T Consensus 33 ~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-------~-------~~~~~~~~~~~~~l~~~~kPvIAa 98 (255)
T PRK09674 33 QLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEKDL-------A-------ATLNDPRPQLWQRLQAFNKPLIAA 98 (255)
T ss_pred HHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhccch-------h-------hhHHHHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999999999998743110 0 011123345677889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++++++|++++++||+++||||++
T Consensus 99 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 177 (255)
T PRK09674 99 VNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGK-SLASQMVLTGESITAQQAQQAGLVSEV 177 (255)
T ss_pred ECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCCcEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++++..||.+++.+|+.++.....++++.++.+.......+.++++++++..+..+|+
T Consensus 178 v~~-~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~i~af~~kr~ 249 (255)
T PRK09674 178 FPP-ELTLERALQLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAATEDRHEGISAFLEKRT 249 (255)
T ss_pred cCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhccCC
Confidence 997 889999999999999999999999999999988888999999988888888899999999999988653
|
|
| >PRK08139 enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=326.17 Aligned_cols=221 Identities=26% Similarity=0.401 Sum_probs=196.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|++|++|||+|.|++||+|+|++++..... ......+++.+.+++.++.++||||||+
T Consensus 42 ~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~kPvIAa 110 (266)
T PRK08139 42 ALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAARG-----------LAYFRALFARCSRVMQAIVALPQPVIAR 110 (266)
T ss_pred HHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcccc-----------hhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998743111 0112233455667888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|+++ +++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 111 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 188 (266)
T PRK08139 111 VHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPR-KQAMEMLLTGEFIDAATAREWGLVNRV 188 (266)
T ss_pred ECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCccEe
Confidence 99999999999999999999999999999999999999775 5689999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|+ +++.+.+.+++++|+..||.+++.+|+.++.....++++.+..+.......+.++|+++++..+..+|+.+
T Consensus 189 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p~ 262 (266)
T PRK08139 189 VPA-DALDAAVARLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMMAEDAEEGIDAFLEKRPPE 262 (266)
T ss_pred eCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCCC
Confidence 997 89999999999999999999999999999998888899999988888778889999999999998776443
|
|
| >PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=328.41 Aligned_cols=223 Identities=23% Similarity=0.351 Sum_probs=192.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++.++.|++|++|||+|.|++||+|+|++++...... . .. .....+...++.++..+..+||||||+
T Consensus 39 el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~--~-~~-----~~~~~~~~~~~~~~~~l~~~~kPvIAa 110 (275)
T PRK09120 39 EMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDA--Q-PE-----ILQERIRREAYGWWRRLRWYQKPTIAM 110 (275)
T ss_pred HHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhcccc--c-hh-----HHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578899999999999999999999999999999987431110 0 00 001122234456788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 111 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~-~~a~~llltg~~~~A~eA~~~Glv~~v 189 (275)
T PRK09120 111 VNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGH-RDALYYIMTGETFTGRKAAEMGLVNES 189 (275)
T ss_pred EcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCH-HHHHHHHhcCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH--HhhcccCCc-hHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDK--ESKNGCDRR-NCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~--~~~~~~~~~-~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.....++.+.++.+.. .....+.++ |+.|++.+++.+|.
T Consensus 190 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~d~~eg~~afl~kr~ 264 (275)
T PRK09120 190 VPL-AQLRARTRELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLDPEGGREEGLKQFLDDKS 264 (275)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccc
Confidence 997 8999999999999999999999999999999888888888877643 233346777 89999999988775
|
|
| >TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=324.56 Aligned_cols=221 Identities=26% Similarity=0.394 Sum_probs=194.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|+ +++|||+|.|++||+|+|++++...... ..+ ....+...+..++.++..+||||||+
T Consensus 30 ~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~~~---~~~------~~~~~~~~~~~~~~~l~~~~kPvIaa 99 (256)
T TIGR02280 30 ELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTPGG---APD------LGRTIETFYNPLVRRLRALPLPVVCA 99 (256)
T ss_pred HHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcccc---chh------HHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4788999999998 9999999999999999999987531110 000 00111222345678899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++++||+++||||++
T Consensus 100 v~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 178 (256)
T TIGR02280 100 VNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGR-ARAMGLAMLGEKLDARTAASWGLIWQV 178 (256)
T ss_pred ECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++++..||.+++.+|+.++.....++.+.++.+.......+.++|+++++..+..+|+
T Consensus 179 v~~-~~l~~~a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~ 250 (256)
T TIGR02280 179 VDD-AALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGRSADYAEGVTAFLDKRN 250 (256)
T ss_pred eCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHHcCCC
Confidence 997 899999999999999999999999999999988888999999888888888899999999999987653
|
This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). |
| >PRK08138 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=325.37 Aligned_cols=217 Identities=31% Similarity=0.479 Sum_probs=195.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++++.+++|++||+|||+|.|++||+|+|++++.... . ...+...+++++..+..+|||+||+
T Consensus 39 ~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-------~-------~~~~~~~~~~~~~~l~~~~kPvIaa 104 (261)
T PRK08138 39 QLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAG-------A-------IEMYLRHTERYWEAIAQCPKPVIAA 104 (261)
T ss_pred HHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhccc-------h-------hHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4788999999999999999999999999999999875311 0 0112233456678889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++++||+++||||++
T Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 183 (261)
T PRK08138 105 VNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGK-FKAMRMALTGCMVPAPEALAIGLVSEV 183 (261)
T ss_pred EccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCCcEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++++..||.+++.+|+.++.....++++.+..+...+...+.++++++++..+..+|+
T Consensus 184 v~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~i~af~~kr~ 255 (261)
T PRK08138 184 VED-EQTLPRALELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFDSEDQKEGMDAFLEKRK 255 (261)
T ss_pred cCc-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCC
Confidence 998 889999999999999999999999999999888888999998888888888899999999999987664
|
|
| >PRK07511 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-45 Score=324.89 Aligned_cols=224 Identities=25% Similarity=0.358 Sum_probs=200.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++++++|++||+|||+|.|++||+|+|++++...... . ......++..+++++.++.++||||||+
T Consensus 34 ~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~l~~~~kpvIAa 104 (260)
T PRK07511 34 AGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAK-----P----PSVQAASIDGLHDWIRAIRAFPKPVIAA 104 (260)
T ss_pred HHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcccc-----c----chhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578899999999999999999999999999999987532110 0 0112234456677888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++++||+++||||++
T Consensus 105 v~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 183 (260)
T PRK07511 105 VEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPR-QLATELLLEGKPISAERLHALGVVNRL 183 (260)
T ss_pred ECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCH-HHHHHHHHhCCCCCHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
|++ +++.+++.++++++++.+|.++..+|+.++.....++.+.+..+...+...+.++++++++..+..+|+.+
T Consensus 184 v~~-~~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~i~~f~~~r~~~ 257 (260)
T PRK07511 184 AEP-GQALAEALALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLHHADALEGIAAFLEKRAPD 257 (260)
T ss_pred eCc-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhccCCCC
Confidence 997 88999999999999999999999999999998888899999999888888889999999999998877543
|
|
| >PRK06563 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=324.60 Aligned_cols=221 Identities=27% Similarity=0.303 Sum_probs=192.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++++++++|++|++|||+|.|++||+|+|++++..... ... ....... ...+...+.++||||||+
T Consensus 30 ~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~-----~~~---~~~~~~~---~~~~~~~l~~~~kPvIAa 98 (255)
T PRK06563 30 DLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLA-----AGG---FPFPEGG---IDPWGTVGRRLSKPLVVA 98 (255)
T ss_pred HHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccc-----cch---hhhhhhh---hHHHHHHHhcCCCCEEEE
Confidence 47889999999999999999999999999999998753111 000 0000111 112233578899999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+ .+++++++||++++++||+++||||++
T Consensus 99 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 177 (255)
T PRK06563 99 VQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGW-GNAMRYLLTGDEFDAQEALRLGLVQEV 177 (255)
T ss_pred EcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhH-HHHHHHHHcCCCcCHHHHHHcCCCcEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.++++++++.||.+++.+|+.++.....++.+.++.+.......+.++|++|++..+..+|+.
T Consensus 178 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p 250 (255)
T PRK06563 178 VPP-GEQLERAIELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFTSEDAKEGVQAFLERRPA 250 (255)
T ss_pred eCH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCC
Confidence 997 8999999999999999999999999999998888889999888877777788899999999999887643
|
|
| >PRK08258 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=327.36 Aligned_cols=225 Identities=26% Similarity=0.402 Sum_probs=198.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+++++|||+|.|++||+|+|++++...... .+ ......+...+++++..|.++||||||+
T Consensus 48 eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~l~~~~kPvIAa 119 (277)
T PRK08258 48 ELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTK----MD----MPELLAFTRMTGDLVKAMRACPQPIIAA 119 (277)
T ss_pred HHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccc----cC----hhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578899999999999999999999999999999987431110 00 0112233444567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCccc-CchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p-~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+|||++|+++||+||++++++|++||+++|++| ++|++++|++++|+ .++++|+++|++++|+||+++||||+
T Consensus 120 V~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~ 198 (277)
T PRK08258 120 VDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQ-GRASELLYTGRSMSAEEGERWGFFNR 198 (277)
T ss_pred ECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCCcE
Confidence 99999999999999999999999999999999999995 78889999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.......+.++|++|++..+..+|+.+
T Consensus 199 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 273 (277)
T PRK08258 199 LVEP-EELLAEAQALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQTEDFRRAYEAFVAKRKPV 273 (277)
T ss_pred ecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCCC
Confidence 9997 88999999999999999999999999999998888899999998888888889999999999998877544
|
|
| >PRK07260 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=324.28 Aligned_cols=223 Identities=26% Similarity=0.295 Sum_probs=197.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++++|||+|.|++||+|+|++++...... .+ ......+.+.+++++.++.++||||||+
T Consensus 33 ~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~l~~~~kPvIaa 104 (255)
T PRK07260 33 EILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDE----DD----VQSLVKIAELVNEISFAIKQLPKPVIMC 104 (255)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccc----cc----hhhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478899999999999999999999999999999987532110 00 0111223345567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|+++|++++|+||+++||||++
T Consensus 105 v~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~-~~a~~l~l~g~~~sa~eA~~~Glv~~v 183 (255)
T PRK07260 105 VDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGL-NRATHLAMTGEALTAEKALEYGFVYRV 183 (255)
T ss_pred ecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCH-HHHHHHHHhCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999996 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|. +++.+.+.++++++++.+|.+++.+|+.++.....++++.+..+.......+.++++++++..+..+|+
T Consensus 184 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~~kr~ 255 (255)
T PRK07260 184 AES-EKLEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAFKEDFKEGVRAFSERRR 255 (255)
T ss_pred cCH-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCC
Confidence 997 899999999999999999999999999999988888999998888887888899999999998887663
|
|
| >PRK06127 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-45 Score=324.24 Aligned_cols=222 Identities=23% Similarity=0.415 Sum_probs=198.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+++++|++|++|||+|.| ++||+|+|++++...... . .....+....+.++..+..+||||||
T Consensus 42 ~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~----~------~~~~~~~~~~~~~~~~i~~~~kPvIa 111 (269)
T PRK06127 42 ALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESRSD----A------EAVAAYEQAVEAAQAALADYAKPTIA 111 (269)
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcccc----h------HHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999999 899999999987532110 0 01122334455678889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++++||+++||||+
T Consensus 112 av~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~ 190 (269)
T PRK06127 112 CIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGP-SAAKDLFYTARRFDAAEALRIGLVHR 190 (269)
T ss_pred EECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCCCE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+||+ +++.+++.+++++++..||.+++.+|+.++.....++++.++.+.......+.+++.++++.++..+|+.
T Consensus 191 vv~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~ekr~p 264 (269)
T PRK06127 191 VTAA-DDLETALADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFDSEDYREGRAAFMEKRKP 264 (269)
T ss_pred eeCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCC
Confidence 9997 8999999999999999999999999999999888889999888888878888999999999999887743
|
|
| >PRK08140 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-45 Score=322.85 Aligned_cols=223 Identities=27% Similarity=0.381 Sum_probs=195.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++ |+++++|||+|.|++||+|+|++++...... .... ....+...+..++.++.++||||||+
T Consensus 35 ~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~l~~~~kPvIaa 105 (262)
T PRK08140 35 ELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGG--AMPD------LGESIETFYNPLVRRLRALPLPVIAA 105 (262)
T ss_pred HHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccc--cchh------hHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4788999999 9999999999999999999999987421100 0000 00111122345678899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|+++|++++++||+++||||++
T Consensus 106 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 184 (262)
T PRK08140 106 VNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGM-ARALGLALLGEKLSAEQAEQWGLIWRV 184 (262)
T ss_pred ECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.......+.++++++++..+..+|+.
T Consensus 185 v~~-~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~af~~kr~p 257 (262)
T PRK08140 185 VDD-AALADEAQQLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGRSADYAEGVSAFLEKRAP 257 (262)
T ss_pred eCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhcCCCC
Confidence 997 8899999999999999999999999999999888889999998888777788999999999999887643
|
|
| >PRK08252 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=321.23 Aligned_cols=217 Identities=31% Similarity=0.406 Sum_probs=190.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++..... .. ... ..++.++ ...+||||||+
T Consensus 34 ~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~-----~~------~~~---~~~~~~~--~~~~~kPvIaa 97 (254)
T PRK08252 34 GLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARGER-----PS------IPG---RGFGGLT--ERPPRKPLIAA 97 (254)
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcccc-----hh------hhH---HHHHHHH--HhcCCCCEEEE
Confidence 47889999999999999999999999999999998753110 00 000 1111222 14689999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++++||+++||||++
T Consensus 98 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 176 (254)
T PRK08252 98 VEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPY-HIAMELALTGDMLTAERAHELGLVNRL 176 (254)
T ss_pred ECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCH-HHHHHHHHcCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999996 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|+ +++.+++.+++++++..||.+++.+|+.++.....++++.++.+.......+.++++++++..+..+|+.+
T Consensus 177 v~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~eg~~af~~kr~p~ 250 (254)
T PRK08252 177 TEP-GQALDAALELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFTSADAKEGATAFAEKRAPV 250 (254)
T ss_pred cCc-chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCchHHHHHHHHhcCCCCC
Confidence 997 89999999999999999999999999999988877899998888777777889999999999998876544
|
|
| >PRK05995 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=322.68 Aligned_cols=223 Identities=29% Similarity=0.405 Sum_probs=192.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++.|++||+|||+|.|++||+|+|++++....... .. . .......+++++.++.++||||||+
T Consensus 35 ~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---~~-----~-~~~~~~~~~~~~~~l~~~~kPvIaa 105 (262)
T PRK05995 35 ELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYS---DD-----E-NRADARRLADMLRAIYRCPKPVIAR 105 (262)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccC---ch-----h-hhhHHHHHHHHHHHHHcCCCCEEEE
Confidence 4788999999999999999999999999999999874321100 00 0 0111234567788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++ +|++++|+ .++++|+++|++++|+||+++||||++
T Consensus 106 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vg~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 183 (262)
T PRK05995 106 VHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISP-YVIRAMGE-RAARRYFLTAERFDAAEALRLGLVHEV 183 (262)
T ss_pred ECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHH-HHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCCCee
Confidence 9999999999999999999999999999999999999988775 58999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHH-HHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEG-LNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|. +++.+++.++++++++.||.+++.+|+.++.....++++. ++.+.......+.++|+++++..+..+|+.+
T Consensus 184 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~~kr~p~ 258 (262)
T PRK05995 184 VPA-EALDAKVDELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRATEEAREGVAAFLEKRKPA 258 (262)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCC
Confidence 997 8999999999999999999999999999998877788777 6766666666788999999999998877554
|
|
| >PRK07799 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-45 Score=321.80 Aligned_cols=222 Identities=27% Similarity=0.361 Sum_probs=192.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++...... ........ ....+.. +.++..+||||||+
T Consensus 36 ~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~----~~~~~~~~----~~~~~~~-~~~~~~~~kpvIaa 106 (263)
T PRK07799 36 IMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPG----DSFKDGSY----DPSRIDA-LLKGRRLTKPLIAA 106 (263)
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhcccc----chhhhhhh----hhhHHHH-HHHHhcCCCCEEEE
Confidence 578899999999999999999999999999999987532110 00000000 0111222 23467899999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 107 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 185 (263)
T PRK07799 107 VEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPY-TVACDLLLTGRHITAAEAKEIGLIGHV 185 (263)
T ss_pred ECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++++..||.+++.+|+.++.....++.+.++.+.......+.++++++++..+..+|+
T Consensus 186 v~~-~~l~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~egi~af~~~r~ 257 (263)
T PRK07799 186 VPD-GQALDKALELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFLSEDAKEGPRAFAEKRA 257 (263)
T ss_pred cCc-chHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCccHHHHHHHHHccCC
Confidence 998 889999999999999999999999999999888888999999888877778899999999999987653
|
|
| >PRK07468 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-45 Score=320.86 Aligned_cols=222 Identities=24% Similarity=0.292 Sum_probs=192.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.++.|+++++|||+|.|++||+|+|++++..... .. .. ........++.++..+..+||||||+
T Consensus 36 ~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~--~~--~~-----~~~~~~~~~~~~~~~l~~~~kPvIaa 106 (262)
T PRK07468 36 ELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMT--AD--RA-----TRIEEARRLAMMLKALNDLPKPLIGR 106 (262)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhcc--cc--hh-----hHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47788999999999999999999999999999998743110 00 00 00112234566788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++ +++|+ .++++|++||++++++||+++||||++
T Consensus 107 v~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~-~~vG~-~~a~~lll~g~~~~a~eA~~~Glv~~v 184 (262)
T PRK07468 107 IQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVV-ARMGE-ANARRVFMSARLFDAEEAVRLGLLSRV 184 (262)
T ss_pred ECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHH-hhccH-HHHHHHHHhCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999998755 56995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|. +++.+.+.++++++++.+|.+++.+|+.++......+++.++.+.......+.++|+++++.++..+|+.
T Consensus 185 ~~~-~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~e~~~af~~kr~~ 257 (262)
T PRK07468 185 VPA-ERLDAAVEAEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWETEEAREGIAAFFDKRAP 257 (262)
T ss_pred cCH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCC
Confidence 997 8899999999999999999999999999988766667888888877777788999999999999887743
|
|
| >PRK07659 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-45 Score=320.77 Aligned_cols=220 Identities=22% Similarity=0.282 Sum_probs=197.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++++ .|+++++|||+|.|++||+|+|++++..... . .....+...+++++.++..+||||||+
T Consensus 37 ~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~------~-----~~~~~~~~~~~~~~~~l~~~~~pvIaa 104 (260)
T PRK07659 37 ELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSSND------E-----SKFDGVMNTISEIVVTLYTMPKLTISA 104 (260)
T ss_pred HHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhccC------c-----hhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 477889999 5899999999999999999999998753211 0 011234455677888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 183 (260)
T PRK07659 105 IHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGE-NKAKQIIWEGKKLSATEALDLGLIDEV 183 (260)
T ss_pred ecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCH-HHHHHHHHhCCccCHHHHHHcCChHHH
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
| + +++.+++.++++++++.||.+++.+|+.++.....++++.++.+.......+.+++++|++..+..+|+..
T Consensus 184 v-~-~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~egi~af~~kr~p~ 256 (260)
T PRK07659 184 I-G-GDFQTAAKQKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQTADHKEGIRAFLEKRLPV 256 (260)
T ss_pred h-h-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHhHHHHHHHHhcCCCCC
Confidence 9 6 78999999999999999999999999999988888899999998888888889999999999998877543
|
|
| >PRK07327 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-45 Score=321.94 Aligned_cols=218 Identities=25% Similarity=0.362 Sum_probs=185.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|++|++|||+|.|++||+|+|++++.....+ . .....++..++.++..+..+||||||+
T Consensus 43 ~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~l~~~~kPvIAa 112 (268)
T PRK07327 43 ELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMADD-----F-----EVRARVWREARDLVYNVINCDKPIVSA 112 (268)
T ss_pred HHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhccCc-----H-----HHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478899999999999999999999999999999987532110 0 011123344567788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .+++++++||++++|+||+++||||++
T Consensus 113 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 191 (268)
T PRK07327 113 IHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGM-AKAKYYLLLCEPVSGEEAERIGLVSLA 191 (268)
T ss_pred EcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcC---CHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDH---AVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.+++++|++.||.+++.+|+.++..... .++..+..+ ...+.++++++++..+..+|+.
T Consensus 192 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~----~~~~~~~d~~eg~~af~ekr~p 263 (268)
T PRK07327 192 VDD-DELLPKALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALE----FMGFSGPDVREGLASLREKRAP 263 (268)
T ss_pred cCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHH----HHHccChhHHHHHHHHHhcCCC
Confidence 997 89999999999999999999999999999875322 344444333 2356788999999988876643
|
|
| >PRK03580 carnitinyl-CoA dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-45 Score=320.56 Aligned_cols=220 Identities=28% Similarity=0.433 Sum_probs=191.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++|++|||+|.| ++||+|+|++++..... ... .+.......+.++..+||||||
T Consensus 33 ~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~~-----~~~--------~~~~~~~~~~~~l~~~~kPvIa 99 (261)
T PRK03580 33 AMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEA-----PDA--------DFGPGGFAGLTEIFDLDKPVIA 99 (261)
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccCc-----chh--------hhhhhhhHHHHHHHhCCCCEEE
Confidence 478899999999999999999999 79999999998753211 000 0111123346778899999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++++++|++++|+||+++||||+
T Consensus 100 av~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 178 (261)
T PRK03580 100 AVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPP-AIANEMVMTGRRMDAEEALRWGIVNR 178 (261)
T ss_pred EECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCH-HHHHHHHHhCCccCHHHHHHcCCCcE
Confidence 99999999999999999999999999999999999999999999999999996 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH----HhhcccCCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDK----ESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
++|. +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+.. .....+.++|+++++..+..+|+.+
T Consensus 179 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~d~~e~~~af~ekr~~~ 257 (261)
T PRK03580 179 VVPQ-AELMDRARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLHSEDALEGPRAFAEKRDPV 257 (261)
T ss_pred ecCH-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhcCccHHHHHHHHhcCCCCC
Confidence 9997 8999999999999999999999999999998888788888877653 4455678999999999998877544
|
|
| >PRK05981 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=321.67 Aligned_cols=226 Identities=28% Similarity=0.420 Sum_probs=196.8
Q ss_pred CHHHHHHHhhhCC-CceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENE-ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~-~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++++.++.|+ ++++|||+|.|++||+|+|++++........ .. ......+...++.++.+|.++||||||
T Consensus 35 ~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~l~~~~kpvIa 108 (266)
T PRK05981 35 GLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESD--SG----GDAGAALETAYHPFLRRLRNLPCPIVT 108 (266)
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhccccccc--cc----chhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 5788999998876 4999999999999999999998753211000 00 000112233456778899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++++||+++||||+
T Consensus 109 av~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 187 (266)
T PRK05981 109 AVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGK-ARAMELSLLGEKLPAETALQWGLVNR 187 (266)
T ss_pred EECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHH-HHHHHHHHhCCCcCHHHHHHcCCceE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++|+ +++.+++.+++++++..||.+++.+|+.++.....++.+.++.+.......+.++|.+|++.++..+|+.
T Consensus 188 vv~~-~~~~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~s~d~~e~~~af~~kr~~ 261 (266)
T PRK05981 188 VVDD-AELMAEAMKLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGKTEDFKEGVGAFLQKRPA 261 (266)
T ss_pred eeCH-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhcChhHHHHHHHHhcCCCC
Confidence 9997 8899999999999999999999999999998877789999998888888888999999999999887643
|
|
| >PRK06494 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-45 Score=319.82 Aligned_cols=217 Identities=29% Similarity=0.403 Sum_probs=188.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.+++++++.|+++++|||+|.| ++||+|+|++++..... .. . ... .+..+ ..+.++||||||
T Consensus 35 ~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~-----~~--~---~~~----~~~~~-~~~~~~~kPvIa 99 (259)
T PRK06494 35 ELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGK-----RG--W---PES----GFGGL-TSRFDLDKPIIA 99 (259)
T ss_pred HHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCc-----ch--h---hhH----HHHHH-HHHhcCCCCEEE
Confidence 478899999999999999999999 79999999998743211 00 0 000 11122 234588999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 100 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~-~~a~~lll~g~~~~a~eA~~~GLv~~ 178 (259)
T PRK06494 100 AVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGL-KRAMGMILTGRRVTAREGLELGFVNE 178 (259)
T ss_pred EECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCH-HHHHHHHHcCCcCCHHHHHHcCCCcE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHH--HHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQV--DKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++|+ +++.+++.+++++++..||.+++.+|+.++.....++++.++.+ .......+.++|+++++..+..+|+.
T Consensus 179 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~d~~eg~~af~~kr~p 254 (259)
T PRK06494 179 VVPA-GELLAAAERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRASQDYIEGPKAFAEKRPP 254 (259)
T ss_pred ecCH-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHccCCC
Confidence 9997 89999999999999999999999999999988887898888887 34456677899999999999886643
|
|
| >PRK06688 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=319.72 Aligned_cols=218 Identities=25% Similarity=0.382 Sum_probs=198.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++.|+++++|||+|.|++||+|+|++++..... .. ..+...+++++.++.++|||+||+
T Consensus 36 ~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~-----~~--------~~~~~~~~~~~~~l~~~~kp~Iaa 102 (259)
T PRK06688 36 ALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPP-----KP--------PDELAPVNRFLRAIAALPKPVVAA 102 (259)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccCc-----ch--------HHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47889999999999999999999999999999998754211 00 123445667888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|+ .++++++++|++++++||+++||||++
T Consensus 103 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 181 (259)
T PRK06688 103 VNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGR-ARAAEMLLLGEPLSAEEALRIGLVNRV 181 (259)
T ss_pred ECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhH-HHHHHHHHhCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++++..||.+++.+|+.++.....++++.+..+.......+.+++.++++..+..+|+
T Consensus 182 ~~~-~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~af~~~~~ 253 (259)
T PRK06688 182 VPA-AELDAEADAQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLRTPDFREGATAFIEKRK 253 (259)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCC
Confidence 997 899999999999999999999999999999988889999999998888888899999999999888653
|
|
| >PRK05870 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-45 Score=319.69 Aligned_cols=214 Identities=21% Similarity=0.306 Sum_probs=190.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.+++|++|++|||+|.|++||+|+|++++.....+ . ..+.+..+++++..+.++||||||+
T Consensus 34 ~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~-----~-------~~~~~~~~~~~~~~l~~~~kPvIaa 101 (249)
T PRK05870 34 QLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGR-----P-------AEDGLRRIYDGFLAVASCPLPTIAA 101 (249)
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhccccc-----c-------hHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999987532110 0 0112334455677889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+ .+++++++||++++++||+++||||++
T Consensus 102 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 180 (249)
T PRK05870 102 VNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGP-QVARAALLFGMRFDAEAAVRHGLALMV 180 (249)
T ss_pred ECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCH-HHHHHHHHhCCccCHHHHHHcCCHHHH
Confidence 9999999999999999999999999999999999999999999999999996 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhc-CCHHHHHHHHHHHhhcccCCchHHhccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRD-HAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 230 (275)
+ +++.+++.+++++++..||.+++.+|+.++.... .++++.++.+.......+.++|+++++.+++.
T Consensus 181 v---~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~~ 248 (249)
T PRK05870 181 A---DDPVAAALELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQSPEFAARLAAAQR 248 (249)
T ss_pred H---hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhc
Confidence 9 3688999999999999999999999999998877 78999998888888888899999999987764
|
|
| >PRK07938 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=317.59 Aligned_cols=217 Identities=27% Similarity=0.369 Sum_probs=190.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|++||+|||+|.|++||+|+|++++..... . .........+++++..+.++|||+||+
T Consensus 32 ~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~------~-----~~~~~~~~~~~~~~~~i~~~~kPvIAa 100 (249)
T PRK07938 32 ALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPG------F-----TALIDANRGCFAAFRAVYECAVPVIAA 100 (249)
T ss_pred HHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhccc------h-----hHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999999999998642110 0 011122234456778899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|+ .++++|+++|++++|+||+++||||++
T Consensus 101 v~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 176 (249)
T PRK07938 101 VHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQ-HLMRALFFTAATITAAELHHFGSVEEV 176 (249)
T ss_pred EcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCH-HHHHHHHHhCCcCCHHHHHHCCCccEE
Confidence 9999999999999999999999999999999999986 456789999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.......+.++|++|++.++..+|+
T Consensus 177 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~ekr~ 248 (249)
T PRK07938 177 VPR-DQLDEAALEVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNLAGVSDEHRDAFVEKRK 248 (249)
T ss_pred eCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCccHHHHHHHHHhcCC
Confidence 997 899999999999999999999999999999887778888888887777778899999999999988763
|
|
| >PRK06023 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-45 Score=318.61 Aligned_cols=214 Identities=20% Similarity=0.314 Sum_probs=188.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.+++|+++++|||+|.|++||+|+|++++..... .. ..+...+++++.++.++||||||+
T Consensus 37 ~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~-----~~--------~~~~~~~~~~~~~l~~~~kPvIAa 103 (251)
T PRK06023 37 TMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAM-----GG--------TSFGSEILDFLIALAEAEKPIVSG 103 (251)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccc-----cc--------hhhHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 00 011223456778899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|+ .++++++++|++++++||+++||||++
T Consensus 104 v~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 182 (251)
T PRK06023 104 VDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGH-QRAFALLALGEGFSAEAAQEAGLIWKI 182 (251)
T ss_pred eCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhH-HHHHHHHHhCCCCCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 230 (275)
||. +++.+++.+++++|+..||.+++.+|+.++... ..+++.+..+.......+.++++++++..+..
T Consensus 183 v~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~~~~~~e~~~af~e 250 (251)
T PRK06023 183 VDE-EAVEAETLKAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLKSAEARAAFEAFMR 250 (251)
T ss_pred eCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhCCHHHHHHHHHHhc
Confidence 997 899999999999999999999999999998764 46777777776666777889999999877653
|
|
| >PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-45 Score=321.26 Aligned_cols=223 Identities=24% Similarity=0.314 Sum_probs=190.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.++.|++||+|||+|.|++||+|+|++++..... .+.... ......+++++..+.++||||||+
T Consensus 37 el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~l~~~~kPvIaa 107 (265)
T PRK05674 37 ELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSAD-----LDYNTN----LDDARELAELMYNLYRLKIPTLAV 107 (265)
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhccc-----ccchhh----hHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57889999999999999999999999999999998743111 000000 111233456788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++ ++++++|. .+++++++||++++|+||+++||||++
T Consensus 108 V~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 185 (265)
T PRK05674 108 VQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGE-RAARRYALTAERFDGRRARELGLLAES 185 (265)
T ss_pred EcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCH-HHHHHHHHhCcccCHHHHHHCCCccee
Confidence 9999999999999999999999999999999999999987765 58999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHH-HHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQV-DKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|. +++.+++.+++++++..||.+++.+|+.++.....++++.+..+ .......+.+++.++++..+..+|+.+
T Consensus 186 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~e~~~af~~kr~p~ 260 (265)
T PRK05674 186 YPA-AELEAQVEAWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRVSAEGQEGLRAFLEKRTPA 260 (265)
T ss_pred cCH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCCCC
Confidence 997 89999999999999999999999999999998887887777643 344555678999999999998876543
|
|
| >PLN02888 enoyl-CoA hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=319.74 Aligned_cols=215 Identities=26% Similarity=0.399 Sum_probs=189.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++..... .. .. ...++++..+..+||||||+
T Consensus 41 ~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----~~-------~~---~~~~~~~~~i~~~~kPvIaa 105 (265)
T PLN02888 41 ELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVFK-----GD-------VK---DVETDPVAQMERCRKPIIGA 105 (265)
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhcc-----ch-------hh---HHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999999999997642111 00 00 11234566788999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++++||+++||||++
T Consensus 106 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 184 (265)
T PLN02888 106 INGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGA-NRAREVSLTAMPLTAETAERWGLVNHV 184 (265)
T ss_pred ECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCH-HHHHHHHHhCCccCHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhccc--CCchHHhccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGC--DRRNCNKGVSPERMSH 232 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~e~~~~~~~~~ 232 (275)
|++ +++.+++.+++++++..+|.+++.+|+.++.....++++.+..+.......+ .++++.+++.+++.+|
T Consensus 185 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~d~~e~~~af~ekr 257 (265)
T PLN02888 185 VEE-SELLKKAREVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYNGMTKEQFQKMQEFIAGR 257 (265)
T ss_pred eCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhcC
Confidence 997 8899999999999999999999999999998888788888888766554443 5889999999988765
|
|
| >PRK05864 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=321.40 Aligned_cols=227 Identities=31% Similarity=0.415 Sum_probs=190.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|++|++|||+|.|++||+|+|++++...... ..... ..........++.++..+..+||||||+
T Consensus 41 ~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~~~~kPvIaa 115 (276)
T PRK05864 41 PLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHV----EGLTR-PTYALRSMELLDDVILALRRLHQPVIAA 115 (276)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhccccc----ccccc-hhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999986421100 00000 0001122344566788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCccc-CchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p-~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+|||++|+++||+||++++++|++||+++|++| +.|++++|++++|+ .++++|+++|++++|+||+++||||+
T Consensus 116 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~-~~A~~l~l~g~~~~a~eA~~~Glv~~ 194 (276)
T PRK05864 116 VNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGS-SRAFEIMLTGRDVDAEEAERIGLVSR 194 (276)
T ss_pred ECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCH-HHHHHHHHcCCccCHHHHHHcCCcce
Confidence 99999999999999999999999999999999999997 78889999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcC-CHHHHHHHHHHHh-hcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDH-AVEEGLNQVDKES-KNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++..... ++++.+..+.... ...+.++|+++++.++..+|+.
T Consensus 195 vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~d~~e~~~af~~kr~p 270 (276)
T PRK05864 195 QVPD-EQLLDTCYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLLTANFEEAVAARAEKRPP 270 (276)
T ss_pred eeCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccChhHHHHHHHHhccCCC
Confidence 9997 89999999999999999999999999999887664 6777776664322 1246789999999998887643
|
|
| >PRK06210 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=321.10 Aligned_cols=228 Identities=26% Similarity=0.385 Sum_probs=195.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARK-SKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|++++.|+++++|||+|.|++||+|+|++++........ ..... ..........+++++..+.++||||||
T Consensus 37 ~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa 113 (272)
T PRK06210 37 EVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDG---RRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIA 113 (272)
T ss_pred HHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCcccc---cccccchhhhhhhhhhHHHHHHHHHhCCCCEEE
Confidence 57889999999999999999999999999999998754211000 00000 000011112245567789999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 114 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~-~~a~~l~ltg~~~~a~eA~~~Glv~~ 192 (272)
T PRK06210 114 AINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGH-ANALDLLLSARTFYAEEALRLGLVNR 192 (272)
T ss_pred EECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCH-HHHHHHHHcCCccCHHHHHHcCCcce
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASK-SPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~-~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
++|+ +++.+++.+++++++.. +|.++..+|+.++.....++++.++.+.......+.+++++|++.++..+|+
T Consensus 193 vv~~-~~l~~~a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~egi~af~~kr~ 266 (272)
T PRK06210 193 VVPP-DELMERTLAYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQRPDFIEGVASFLEKRP 266 (272)
T ss_pred ecCH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhcCccHHHHHHHHhccCC
Confidence 9997 88999999999999985 9999999999999988888999998888777778899999999999988764
|
|
| >COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=318.50 Aligned_cols=217 Identities=36% Similarity=0.543 Sum_probs=195.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.++.|++||+|||+|.|++||+|+||+.+.. .. +. .....++...+.++.++.++||||||+
T Consensus 36 ~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~-~~------~~----~~~~~~~~~~~~~~~~l~~~~kPvIAa 104 (257)
T COG1024 36 ELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS-PE------DG----NAAENLMQPGQDLLRALADLPKPVIAA 104 (257)
T ss_pred HHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc-cc------ch----hHHHHHHhHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999999999999864 11 00 011245666778899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+|||+++++|++||+++|++|+.|++++|+|++|+ .++++|++||++++++||+++|||+++
T Consensus 105 v~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 183 (257)
T COG1024 105 VNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGR-GRAKELLLTGEPISAAEALELGLVDEV 183 (257)
T ss_pred EcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCH-HHHHHHHHcCCcCCHHHHHHcCCcCee
Confidence 9999999999999999999999999999999999999987999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 230 (275)
++..+++.+.+.+++++++. +|.++..+|+.++......+++.+..+.......+.++|+.|++..+..
T Consensus 184 v~~~~~l~~~a~~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~eg~~a~~~ 252 (257)
T COG1024 184 VPDAEELLERALELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFSSEDFREGVRAFLE 252 (257)
T ss_pred eCCHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhcChhHHHHHHHHHc
Confidence 98647999999999999998 9999999999999987767888888887777767789999999998888
|
|
| >PRK07509 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=317.25 Aligned_cols=225 Identities=30% Similarity=0.390 Sum_probs=194.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++.|++|++|||+|.|++||+|+|++++..... ................++.++..+.++||||||+
T Consensus 34 ~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpvIaa 108 (262)
T PRK07509 34 ELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSPG-----NAVKLLFKRLPGNANLAQRVSLGWRRLPVPVIAA 108 (262)
T ss_pred HHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhcccc-----hhhhhHhhhhHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 0000001111222234456677888999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .+++++++||++++|+||+++||||++
T Consensus 109 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 187 (262)
T PRK07509 109 LEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRK-DVARELTYTARVFSAEEALELGLVTHV 187 (262)
T ss_pred ECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHcCChhhh
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+++ +.+++.+++++++..||.++..+|+.++.....++++.+..+.......+.++|+++++..+..+|+.
T Consensus 188 v~~---~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~af~ekr~p 258 (262)
T PRK07509 188 SDD---PLAAALALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLLGKNQKIAVKAQMKKRAP 258 (262)
T ss_pred hch---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhcCCCC
Confidence 963 67899999999999999999999999999888888888888877777788999999999999887643
|
|
| >KOG1681|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-46 Score=308.29 Aligned_cols=235 Identities=55% Similarity=0.861 Sum_probs=217.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
|+.++|+.++.||++|+|||+|+|++||+|+|+..+...........+..+....+++++..+++.+..|.++|||+|++
T Consensus 53 E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaa 132 (292)
T KOG1681|consen 53 EFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAA 132 (292)
T ss_pred HHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHH
Confidence 57789999999999999999999999999999877654322122234666777889999999999999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|+|+.|..+||+|+|+++|.|..-|+.+|+..|+|...+||+.+|.++.++++.+|++.++|.||++.|||.++
T Consensus 133 vHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~~elafTar~f~a~EAl~~GLvSrv 212 (292)
T KOG1681|consen 133 VHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLARELAFTARKFSADEALDSGLVSRV 212 (292)
T ss_pred HHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHHHHHHhhhhhcchhhhhhcCcchhh
Confidence 99999999999999999999999999999999999999999999999999977999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|+.+++...+..+|+.|+.++|.++..+|..++.+.+++.++.+.+...|++..+.++|..+++.+.++.++.+
T Consensus 213 f~dk~~ll~~~l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L~s~Dl~~av~a~m~k~k~~ 287 (292)
T KOG1681|consen 213 FPDKEELLNGALPMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSMLLSDDLVKAVMAQMEKLKTV 287 (292)
T ss_pred cCCHHHHHhhhHHHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998888866444
|
|
| >PRK08259 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=317.05 Aligned_cols=218 Identities=24% Similarity=0.278 Sum_probs=187.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+++++|||+|.|++||+|+|++++..... ... . .... ..+...+.++||||||+
T Consensus 34 ~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~~-----~~~----~--~~~~---~~~~~~~~~~~kPvIaa 99 (254)
T PRK08259 34 ALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGRG-----NRL----H--PSGD---GPMGPSRMRLSKPVIAA 99 (254)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhcccc-----hhh----h--hhhc---chhhhHHhcCCCCEEEE
Confidence 57889999999999999999999999999999998753211 000 0 0000 01112234789999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|+.|++++|++++|+ .++++++++|++++|+||+++||||++
T Consensus 100 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~-~~a~~lll~g~~~~a~eA~~~Glv~~v 178 (254)
T PRK08259 100 VSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGH-SRAMDLILTGRPVDADEALAIGLANRV 178 (254)
T ss_pred ECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCCCEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
||. +++.+++.+++++|++.||.+++.+|+.++.....++++.+..+.......+. +|++|++.++..+++-|
T Consensus 179 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~-~d~~egi~af~~~~~~~ 251 (254)
T PRK08259 179 VPK-GQARAAAEELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVLA-AEALEGAARFAAGAGRH 251 (254)
T ss_pred eCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh-hHHHHHHHHHHhhhccc
Confidence 997 89999999999999999999999999999988777898888877665444555 99999999998877644
|
|
| >TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=316.89 Aligned_cols=220 Identities=25% Similarity=0.307 Sum_probs=186.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++++.++.|+++++|||||.| ++||+|+|++++..... . ... . ... ..+..++..+.++||||||
T Consensus 34 el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~--~--~~~-~----~~~--~~~~~~~~~l~~~~kPvIA 102 (259)
T TIGR01929 34 EIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGY--I--DDS-G----VHR--LNVLDVQRQIRTCPKPVIA 102 (259)
T ss_pred HHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccc--c--chh-h----HHH--HHHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999999 89999999987632110 0 000 0 000 1234567788999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++|+||+++||||+
T Consensus 103 av~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 181 (259)
T TIGR01929 103 MVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQ-KKAREIWFLCRQYDAEQALDMGLVNT 181 (259)
T ss_pred EEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHH-HHHHHHHHhCCccCHHHHHHcCCccc
Confidence 99999999999999999999999999999999999999999999999999996 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+||+ +++.+++.+++++|+..||.+++.+|+.++..... .......+.......+.++|+++++..+..+|+.
T Consensus 182 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~~~d~~egi~af~~kr~p 254 (259)
T TIGR01929 182 VVPL-ADLEKETVRWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYMTEEGQEGRNAFLEKRQP 254 (259)
T ss_pred ccCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhcCccHHHHHHHHhccCCC
Confidence 9997 89999999999999999999999999999876543 3333444444555677899999999999887643
|
This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches. |
| >PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=319.77 Aligned_cols=221 Identities=19% Similarity=0.251 Sum_probs=193.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC--CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG--KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVI 78 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G--~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~I 78 (275)
||.++|++++.|+++++|||+|.| ++||+|+|++++..... .. .....+....+.++.+|.++|||||
T Consensus 42 eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~~------~~----~~~~~~~~~~~~~~~~l~~~~kPvI 111 (278)
T PLN03214 42 SLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPKT------SA----ARYAEFWLTQTTFLVRLLRSRLATV 111 (278)
T ss_pred HHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcccc------ch----HHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 578999999999999999999998 69999999998742110 00 0111222333556788999999999
Q ss_pred EEECchhchHHHHHHHHCCEEEEeCCceEeccccccCc-ccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 79 SAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL-TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 79 a~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~-~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
|+|||+|+|||++|+++|||||++++++|++||+++|+ +|+.+++++|++++|+ .++++|++||++++++||+++|||
T Consensus 112 AaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~-~~a~~llltg~~~~a~eA~~~Glv 190 (278)
T PLN03214 112 CAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDR-KVAESLLLRGRLVRPAEAKQLGLI 190 (278)
T ss_pred EEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCH-HHHHHHHHcCCccCHHHHHHcCCC
Confidence 99999999999999999999999999999999999999 5999999999999995 899999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 158 SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
|++||. +++.+.+.+++++|+..+|.+++.+|+.++.....++++.++.+.......+.++|+++++.+++.+.+
T Consensus 191 ~~vv~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~egi~aflek~~ 265 (278)
T PLN03214 191 DEVVPA-AALMEAAASAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLSEPSIIKALGGVMERLS 265 (278)
T ss_pred cEecCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 999997 899999999999999999999999999999887778888888888777778899999999988877543
|
|
| >PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=315.23 Aligned_cols=216 Identities=34% Similarity=0.532 Sum_probs=199.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.++.|+++++||++|.|++||+|+|++++... .......+...++.++.++..+||||||+
T Consensus 29 ~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~------------~~~~~~~~~~~~~~l~~~l~~~~kp~Iaa 96 (245)
T PF00378_consen 29 ELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS------------DEEEAREFFRRFQELLSRLANFPKPTIAA 96 (245)
T ss_dssp HHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH------------HHHHHHHHHHHHHHHHHHHHHSSSEEEEE
T ss_pred HHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc------------ccccccccchhhccccccchhhhhheeec
Confidence 478899999999999999999999999999999998643 11234566778889999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|+ ..+++++++|++++|+||+++||||++
T Consensus 97 v~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 175 (245)
T PF00378_consen 97 VNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGP-SRARELLLTGEPISAEEALELGLVDEV 175 (245)
T ss_dssp ESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHH-HHHHHHHHHTCEEEHHHHHHTTSSSEE
T ss_pred ccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeec-ccccccccccccchhHHHHhhcceeEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 230 (275)
+|+ +++.+.+.+++++++..|+.+++.+|+.++......+++.+..+.......+.++|++|++..+..
T Consensus 176 ~~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~f~e 244 (245)
T PF00378_consen 176 VPD-EELDEEALELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFKSEDFQEGIAAFLE 244 (245)
T ss_dssp ESG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHT
T ss_pred cCc-hhhhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHhC
Confidence 998 789999999999999999999999999999988888999999999888889999999999988765
|
Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A .... |
| >PRK06495 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-44 Score=314.71 Aligned_cols=219 Identities=29% Similarity=0.464 Sum_probs=192.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++++.++.|+++|+|||+|.|++||+|+|++++...... .+ ....+...+++++.++.++|||+||+
T Consensus 34 ~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~----~~------~~~~~~~~~~~~~~~l~~~~kPvIAa 103 (257)
T PRK06495 34 ELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKG----PG------DLRAHNRRTRECFHAIRECAKPVIAA 103 (257)
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhccCC----ch------hHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578899999999999999999999999999999987432110 00 11222344566788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++ |+++++++++|+ .++++|+++|++++|+||+++||||++
T Consensus 104 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~-~~a~~lll~g~~~~a~eA~~~GLv~~v 179 (257)
T PRK06495 104 VNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGH-SLTRRMMLTGYRVPAAELYRRGVIEAC 179 (257)
T ss_pred ECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCH-HHHHHHHHcCCeeCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999996 456789999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+.+.+++++++..||.+++.+|+.++.....++++.++.+.......+.++|+++++..+..+|+.
T Consensus 180 v~~-~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~egi~af~~kr~p 252 (257)
T PRK06495 180 LPP-EELMPEAMEIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAKTEDAKEAQRAFLEKRPP 252 (257)
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcChHHHHHHHHHhccCCC
Confidence 997 8999999999999999999999999999999888889999988888777788999999999999887643
|
|
| >PRK06144 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=314.72 Aligned_cols=217 Identities=29% Similarity=0.457 Sum_probs=187.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.+++++++.|++|++|||+|.| ++||+|+|++++..... .+ ....+...++.++.++.++||||||
T Consensus 39 ~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~~-----~~------~~~~~~~~~~~~~~~l~~~~kPvIa 107 (262)
T PRK06144 39 GLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFST-----AE------DAVAYERRIDRVLGALEQLRVPTIA 107 (262)
T ss_pred HHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhccc-----hh------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 477899999999999999999999 79999999998753211 00 0112233456678889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccc-cCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVD-IGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~-~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~ 158 (275)
+|||+|+|||++|+++||+||++++++|++||++ +|++|++|++++|++++|+ .++++++++|++++|+||+++||||
T Consensus 108 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~ 186 (262)
T PRK06144 108 AIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGA-ARVKDMLFTARLLEAEEALAAGLVN 186 (262)
T ss_pred EECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHcCCcC
Confidence 9999999999999999999999999999999996 9999999999999999995 8999999999999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+++|+ +++.+++.+++++|+..||.+++.+|+.++......+... .......+.++++++++..+..+|+.
T Consensus 187 ~vv~~-~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l~~~----~~~~~~~~~~~~~~e~~~af~~kr~p 257 (262)
T PRK06144 187 EVVED-AALDARADALAELLAAHAPLTLRATKEALRRLRREGLPDG----DDLIRMCYMSEDFREGVEAFLEKRPP 257 (262)
T ss_pred eecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHH----HHHHHHHhcChHHHHHHHHHhcCCCC
Confidence 99997 8999999999999999999999999999998765555443 23444567899999999999886643
|
|
| >TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-44 Score=312.08 Aligned_cols=215 Identities=19% Similarity=0.337 Sum_probs=183.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.||++++|||+|.|++||+|+|++++.. . . ...+...++.++..+..+||||||+
T Consensus 31 ~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~--~------~-------~~~~~~~~~~~~~~l~~~~kPvIaa 95 (251)
T TIGR03189 31 ALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP--D------Q-------CAAMLASLHKLVIAMLDSPVPILVA 95 (251)
T ss_pred HHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc--h------h-------HHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999999999987531 0 0 0112334456788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++ ++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 96 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~-~~~~l~~~vg~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 173 (251)
T TIGR03189 96 VRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPA-ASCLLPERMGR-VAAEDLLYSGRSIDGAEGARIGLANAV 173 (251)
T ss_pred ecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCc-hHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccee
Confidence 9999999999999999999999999999999999999974 57899999996 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHH-HHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIEL-GELIASKSPVAVQGTKKTLVFSRDHAVEEGLN-QVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~-a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+++ .+ +++.++ +++++..||.+++.+|+.++.....++++.+. .+.......+.++|+++++..+..+|+.+
T Consensus 174 ~~~-~~--~~a~~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 247 (251)
T TIGR03189 174 AED-PE--NAALAWFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMATHDAVEGLNAFLEKRPAL 247 (251)
T ss_pred cCc-HH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhcCCCC
Confidence 986 33 456665 68999999999999999999887778877664 44445556778999999999998877554
|
This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. |
| >PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-44 Score=312.06 Aligned_cols=210 Identities=27% Similarity=0.405 Sum_probs=190.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++.|+++|+|||+|.|++||+|+|++++..... . . ..+. . +.++..+.++|||+||+
T Consensus 36 ~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~------~---~----~~~~-~-~~~~~~l~~~~kPvIaa 100 (249)
T PRK07110 36 QLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQT------G---K----GTFT-E-ANLYSLALNCPIPVIAA 100 (249)
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhccc------h---h----hhHh-h-HHHHHHHHcCCCCEEEE
Confidence 57889999999999999999999999999999998753211 0 0 0111 1 45778899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .+++++++||++++++||+++||||++
T Consensus 101 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~-~~a~~llltg~~~~a~eA~~~Glv~~v 179 (249)
T PRK07110 101 MQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGL-ALGQEMLLTARYYRGAELKKRGVPFPV 179 (249)
T ss_pred ecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCCeEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSP 227 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~ 227 (275)
+++ +++.+++.++++++++.||.+++.+|+.++.....++++.++.+.......+.+++.+|++..
T Consensus 180 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~egi~~ 245 (249)
T PRK07110 180 LPR-AEVLEKALELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFHQPEVKRRIES 245 (249)
T ss_pred eCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHhHHHHHHH
Confidence 997 899999999999999999999999999999998889999999888888888899999998754
|
|
| >TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-44 Score=313.50 Aligned_cols=216 Identities=26% Similarity=0.310 Sum_probs=182.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|+.++.|++|++|||+|.| ++||+|+|++++..... .. ..+...++.++..+.++||||||
T Consensus 33 ~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~------~~-------~~~~~~~~~~~~~l~~~~kPvIa 99 (256)
T TIGR03210 33 ELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGGYD------GR-------GTIGLPMEELHSAIRDVPKPVIA 99 (256)
T ss_pred HHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcccc------ch-------hHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999 79999999998732100 00 01112345677889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+ .+++++++||++++|+||+++||||+
T Consensus 100 av~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~-~~A~~lll~g~~~~a~eA~~~Glv~~ 178 (256)
T TIGR03210 100 RVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGE-KKAREIWYLCRRYTAQEALAMGLVNA 178 (256)
T ss_pred EECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCH-HHHHHHHHhCCCcCHHHHHHcCCcee
Confidence 99999999999999999999999999999999999999888888999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCH-HHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAV-EEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
++|+ +++.+++.+++++|++.||.+++.+|+.++....... .+.+ +.......+.++|+++++.++..+|+
T Consensus 179 vv~~-~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~--~~~~~~~~~~~~d~~e~~~af~~kr~ 250 (256)
T TIGR03210 179 VVPH-DQLDAEVQKWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAGM--GMYALKLYYDTAESREGVKAFQEKRK 250 (256)
T ss_pred eeCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcccchHHHH--HHHHHHHHccChhHHHHHHHHhccCC
Confidence 9997 8999999999999999999999999999987654321 1112 22334446788999999999988764
|
Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. |
| >PRK06190 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=311.81 Aligned_cols=202 Identities=25% Similarity=0.366 Sum_probs=179.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|++|++|||+|.|++||+|+|++++..... .. .. ...++.++.++.++|||+||+
T Consensus 35 ~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~------~~----~~----~~~~~~~~~~i~~~~kPvIAa 100 (258)
T PRK06190 35 ALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGS------AY----GA----QDALPNPSPAWPAMRKPVIGA 100 (258)
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccc------hh----hH----HHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 00 00 123456778899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 101 V~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 179 (258)
T PRK06190 101 INGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGI-GRARRMSLTGDFLDAADALRAGLVTEV 179 (258)
T ss_pred ECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCH-HHHHHHHHhCCccCHHHHHHcCCCeEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDR 218 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 218 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.......+.+
T Consensus 180 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s 236 (258)
T PRK06190 180 VPH-DELLPRARRLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNRS 236 (258)
T ss_pred cCH-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHcC
Confidence 997 899999999999999999999999999999988888998888877665555444
|
|
| >PRK07396 dihydroxynaphthoic acid synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=314.43 Aligned_cols=220 Identities=25% Similarity=0.287 Sum_probs=186.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|+.++.|++||+|||+|.| ++||+|+|++++..... ... . ....+ ....++..+.++||||||
T Consensus 44 ~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-----~~~--~--~~~~~--~~~~~~~~l~~~~kPvIA 112 (273)
T PRK07396 44 EMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGY-----VDD--D--GVPRL--NVLDLQRLIRTCPKPVIA 112 (273)
T ss_pred HHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccc-----cch--h--hhhhh--HHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999999 69999999998642110 000 0 00111 123466788999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 113 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~-~~a~~l~ltg~~~~A~eA~~~GLv~~ 191 (273)
T PRK07396 113 MVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQ-KKAREIWFLCRQYDAQEALDMGLVNT 191 (273)
T ss_pred EECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhH-HHHHHHHHhCCCcCHHHHHHcCCcCe
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+||+ +++.+++.+++++|+..||.+++.+|+.++.... ..+...+.+.......+.++|++|++..+..+|+.
T Consensus 192 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~~~d~~egi~af~~kr~p 264 (273)
T PRK07396 192 VVPL-ADLEKETVRWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYMTEEAQEGRNAFNEKRQP 264 (273)
T ss_pred ecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhcChhHHHHHHHHhCCCCC
Confidence 9997 8999999999999999999999999999988654 44444444555555667899999999999887643
|
|
| >PRK08260 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=316.94 Aligned_cols=231 Identities=26% Similarity=0.311 Sum_probs=187.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhh---hhh--HHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEI---AEQ--EDVARKSKILRKLITTYQKSISSLERCPK 75 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~k 75 (275)
+|.++|+.++.|++|++|||+|.|++||+|+|++++....... ... ............+...++.++..+..+||
T Consensus 35 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pk 114 (296)
T PRK08260 35 ELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLK 114 (296)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccccccccccccchhHHHHHHHHHHHHHHHHhCCC
Confidence 4788999999999999999999999999999999864210000 000 00000000011222334567788999999
Q ss_pred cEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcC
Q psy14406 76 PVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECG 155 (275)
Q Consensus 76 P~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~G 155 (275)
||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++|+||+++|
T Consensus 115 PvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~llltg~~~~a~eA~~~G 193 (296)
T PRK08260 115 PVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGL-QTALEWVYSGRVFDAQEALDGG 193 (296)
T ss_pred CEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCH-HHHHHHHHcCCccCHHHHHHCC
Confidence 999999999999999999999999999999999999999999999999999999995 8999999999999999999999
Q ss_pred CcccccCChhHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhc--CCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 156 LVSKLYDDKESLLAGAIELGELIASK-SPVAVQGTKKTLVFSRD--HAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 156 Lv~~vv~~~~~l~~~a~~~a~~la~~-~~~a~~~~K~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
|||++||+ +++.+++.+++++|+.. +|.+++.+|+.++.... ...... ..+.......+.+++++|++.++..+|
T Consensus 194 Lv~~vv~~-~~l~~~a~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~~~-~~e~~~~~~~~~~~d~~egi~af~~kr 271 (296)
T PRK08260 194 LVRSVHPP-DELLPAARALAREIADNTSPVSVALTRQMMWRMAGADHPMEAH-RVDSRAIYSRGRSGDGKEGVSSFLEKR 271 (296)
T ss_pred CceeecCH-HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHHHH-HHHHHHHHHHccChhHHHHHHHHhcCC
Confidence 99999997 89999999999999985 99999999999988642 233333 344445555678999999999998766
Q ss_pred cC
Q psy14406 233 DC 234 (275)
Q Consensus 233 ~s 234 (275)
+.
T Consensus 272 ~p 273 (296)
T PRK08260 272 PA 273 (296)
T ss_pred CC
Confidence 43
|
|
| >PRK06072 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=308.63 Aligned_cols=214 Identities=22% Similarity=0.281 Sum_probs=189.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|++||+|||+|.|++||+|+|++++... . ...+.+.++.++..+..+||||||+
T Consensus 31 ~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~--------~-------~~~~~~~~~~~~~~l~~~~kPvIaa 95 (248)
T PRK06072 31 EFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD--------F-------AIDLRETFYPIIREIRFSDKIYISA 95 (248)
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhh--------h-------HHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999876421 0 0112334566788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|+++++++++| . +++++++||++++|+||+++||||++
T Consensus 96 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g-~-~a~~lll~g~~~~a~eA~~~Glv~~~ 173 (248)
T PRK06072 96 INGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTG-Q-RFYEILVLGGEFTAEEAERWGLLKIS 173 (248)
T ss_pred ECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhh-H-HHHHHHHhCCccCHHHHHHCCCcccc
Confidence 999999999999999999999999999999999999999999999999999 4 79999999999999999999999963
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+++.+++.+++++++..||.+++.+|+.++.....++++.++.+.......+.++|+++++..+..+|+..
T Consensus 174 ----~~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p~ 244 (248)
T PRK06072 174 ----EDPLSDAEEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGKTEDFKEGISSFKEKREPK 244 (248)
T ss_pred ----chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhCChhHHHHHHHHhcCCCCC
Confidence 24678899999999999999999999999998778899999888887778889999999999998876543
|
|
| >PRK07827 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=312.14 Aligned_cols=221 Identities=23% Similarity=0.295 Sum_probs=193.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++.++.|+++++|||+|.|++||+|+|++++.....+ .. .....+...+.++++++..+||||||+
T Consensus 37 el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~~------~~~~~~~~~~~~~~~~l~~~~kPvIaa 107 (260)
T PRK07827 37 QLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGGD---PY------DAAVARAREMTALLRAIVELPKPVIAA 107 (260)
T ss_pred HHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcccC---ch------hHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578899999999999999999999999999999987532100 00 011123445567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++++.+ .++++++++|++++++||+++||||++
T Consensus 108 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~--~~a~~l~l~g~~~~a~eA~~~Glv~~v 185 (260)
T PRK07827 108 IDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSP--RAAARYYLTGEKFGAAEAARIGLVTAA 185 (260)
T ss_pred EcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhH--HHHHHHHHhCCccCHHHHHHcCCcccc
Confidence 999999999999999999999999999999999999999999999998754 589999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
++ ++.+++.++++++++.+|.+++.+|+.++.....++++.++.+.......+.++++++++..+..+|+.+
T Consensus 186 ~~---~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~~kr~p~ 257 (260)
T PRK07827 186 AD---DVDAAVAALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFVSDEAREGMTAFLQKRPPR 257 (260)
T ss_pred hH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcChhHHHHHHHHhcCCCCC
Confidence 64 4889999999999999999999999999998888899898888877777889999999999998877544
|
|
| >PRK12478 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=316.75 Aligned_cols=227 Identities=21% Similarity=0.254 Sum_probs=180.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhh-hchhh--hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS-LGQEI--AEQEDVARKSKILRKLITTYQKSISSLERCPKPV 77 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~ 77 (275)
||.++|++++.|++||+|||+|.|++||+|+||++... ..... ....+.......+.......+..+..+.++||||
T Consensus 36 eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 115 (298)
T PRK12478 36 EIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPV 115 (298)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccccCchhhhhhhhhhhcchHHHHHHHHhCCCCE
Confidence 57889999999999999999999999999999986211 00000 0000000000000000001123456788999999
Q ss_pred EEEECchhchHHHHHHHHCCEEEEeCCceEecccccc-CcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCC
Q psy14406 78 ISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI-GLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL 156 (275)
Q Consensus 78 Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~-G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GL 156 (275)
||+|||+|+|||++|+++||+||++++++|++||+++ |++| ++++ .+++|. .++++|++||++++|+||+++||
T Consensus 116 IAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~--~~~vG~-~~A~~llltg~~i~A~eA~~~GL 190 (298)
T PRK12478 116 IAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW--LYRLSL-AKVKWHSLTGRPLTGVQAAEAEL 190 (298)
T ss_pred EEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH--HHHhhH-HHHHHHHHcCCccCHHHHHHcCC
Confidence 9999999999999999999999999999999999997 8875 3333 356995 89999999999999999999999
Q ss_pred cccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhc-CCHHHHHHHHHHHhhcccCCchHH--------hcccc
Q psy14406 157 VSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRD-HAVEEGLNQVDKESKNGCDRRNCN--------KGVSP 227 (275)
Q Consensus 157 v~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~--------e~~~~ 227 (275)
||++||+ +++.+++.+++++|+..||.+++.+|+.++.... .++++.++.+.......+.++|++ ||+.+
T Consensus 191 V~~vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~egv~A 269 (298)
T PRK12478 191 INEAVPF-ERLEARVAEVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRNTPDALEFIRTAETQGVRA 269 (298)
T ss_pred cceecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHH
Confidence 9999997 8999999999999999999999999999998866 358999999988888888888886 48877
Q ss_pred cccccc
Q psy14406 228 ERMSHD 233 (275)
Q Consensus 228 ~~~~~~ 233 (275)
+..+|+
T Consensus 270 f~ekR~ 275 (298)
T PRK12478 270 AVERRD 275 (298)
T ss_pred HHHhcC
Confidence 777663
|
|
| >PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=325.05 Aligned_cols=223 Identities=22% Similarity=0.340 Sum_probs=188.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.++.|++|++|||+|.|++||+|+||+++...... . .....++...+.++.+|.++|||+||+
T Consensus 42 eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~-----~-----~~~~~~~~~~~~l~~~i~~~~kPvIAa 111 (379)
T PLN02874 42 LLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES-----D-----DSCLEVVYRMYWLCYHIHTYKKTQVAL 111 (379)
T ss_pred HHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc-----c-----hHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999987532110 0 011122333445677899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| . .+++|++||++++++||+++||||++
T Consensus 112 V~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g-~-~a~~l~ltG~~i~a~eA~~~GLv~~v 189 (379)
T PLN02874 112 VHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPG-H-LGEYLALTGARLNGKEMVACGLATHF 189 (379)
T ss_pred ecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhH-H-HHHHHHHcCCcccHHHHHHcCCccEE
Confidence 999999999999999999999999999999999999999999999999988 3 79999999999999999999999999
Q ss_pred cCChhHHHH---H----------------------------------------------------------------HHH
Q psy14406 161 YDDKESLLA---G----------------------------------------------------------------AIE 173 (275)
Q Consensus 161 v~~~~~l~~---~----------------------------------------------------------------a~~ 173 (275)
||+ +++.+ + +.+
T Consensus 190 v~~-~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~~~~~~A~~ 268 (379)
T PLN02874 190 VPS-EKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASKTGNEWIKE 268 (379)
T ss_pred eCH-HHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccccccHHHHH
Confidence 997 67755 2 237
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccC---CchHHhccccccc-cccCCc
Q psy14406 174 LGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCD---RRNCNKGVSPERM-SHDCPE 236 (275)
Q Consensus 174 ~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~e~~~~~~~-~~~sp~ 236 (275)
+++.|++.+|.+++.+|+.++.....++++.++.+......... ++|+.||+.++++ +++.|.
T Consensus 269 ~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK~r~P~ 335 (379)
T PLN02874 269 TLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDKDNAPK 335 (379)
T ss_pred HHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcCCCCCC
Confidence 88999999999999999999998888899999887665444444 8999999999984 436663
|
|
| >PRK11423 methylmalonyl-CoA decarboxylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=309.56 Aligned_cols=217 Identities=24% Similarity=0.419 Sum_probs=187.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeC-C-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAA-G-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVI 78 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~-G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~I 78 (275)
+|.++++++++|+ +++|||+|. | ++||+|+|++++..... +. ..+...++.++..+..+|||||
T Consensus 35 ~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~~------~~-------~~~~~~~~~l~~~i~~~~kPvI 100 (261)
T PRK11423 35 DLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGR------DP-------LSYDDPLRQILRMIQKFPKPVI 100 (261)
T ss_pred HHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhccc------cH-------HHHHHHHHHHHHHHHhCCCCEE
Confidence 4778999999887 999999986 3 89999999998743111 00 1122345667888999999999
Q ss_pred EEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcc
Q psy14406 79 SAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 79 a~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~ 158 (275)
|+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|+ .++++|+++|++++|+||+++||||
T Consensus 101 aav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~-~~a~~l~l~g~~~~a~eA~~~GLv~ 179 (261)
T PRK11423 101 AMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGF-HIVKEMFFTASPITAQRALAVGILN 179 (261)
T ss_pred EEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHH-HHHHHHHHcCCCcCHHHHHHcCCcC
Confidence 999999999999999999999999999999999999999999999999999995 9999999999999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhc-CCH-HHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRD-HAV-EEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
++||+ +++.+.+.+++++++..+|.+++.+|+.++.... ..+ +..++.+.......+.++|+++++..+..+|+
T Consensus 180 ~vv~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~eg~~af~~kr~ 255 (261)
T PRK11423 180 HVVEV-EELEDFTLQMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYDSEDYQEGMNAFLEKRK 255 (261)
T ss_pred cccCH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhCChhHHHHHHHHhccCC
Confidence 99997 8999999999999999999999999999986543 233 46666666666677889999999999887654
|
|
| >PRK07854 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-43 Score=304.79 Aligned_cols=208 Identities=24% Similarity=0.384 Sum_probs=183.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++++++| ++++|||+|.|++||+|+|+++... . ..+...++.++..+.++||||||+
T Consensus 31 ~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~--~---------------~~~~~~~~~~~~~l~~~~kP~Iaa 92 (243)
T PRK07854 31 ELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY--A---------------DDFPDALIEMLHAIDAAPVPVIAA 92 (243)
T ss_pred HHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh--H---------------HHHHHHHHHHHHHHHhCCCCEEEE
Confidence 477888888854 9999999999999999999985310 0 112334556788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 93 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 171 (243)
T PRK07854 93 INGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGG-GRARAMLLGAEKLTAEQALATGMANRI 171 (243)
T ss_pred ecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHCCCcccc
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++. . ++.+++++|++.||.++..+|+.++.. .++++.++.+.......+.++|+++++..+..+|+.
T Consensus 172 ~~~----~-~a~~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~~~d~~eg~~af~~kr~p 238 (243)
T PRK07854 172 GTL----A-DAQAWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWASQDAIEAQVARIEKRPP 238 (243)
T ss_pred cCH----H-HHHHHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhcCchHHHHHHHHhCCCCC
Confidence 752 2 789999999999999999999999876 568888888877777788999999999998887643
|
|
| >PRK05869 enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-43 Score=301.28 Aligned_cols=184 Identities=24% Similarity=0.406 Sum_probs=165.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++++|+++++|||||.|++||+|+|++++..... .+ ...+.+.+++++.++.++||||||+
T Consensus 38 ~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-----~~-------~~~~~~~~~~~~~~i~~~~kPvIAa 105 (222)
T PRK05869 38 EIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLSA-----QE-------ADTAARVRQQAVDAVAAIPKPTVAA 105 (222)
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccCh-----hh-------HHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 57889999999999999999999999999999998753211 01 1112334567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++++++|++++|+||+++||||++
T Consensus 106 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 184 (222)
T PRK05869 106 ITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGP-SRAKELVFSGRFFDAEEALALGLIDEM 184 (222)
T ss_pred EcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHCCCCCEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRD 198 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~ 198 (275)
+|+ +++.+++.+++++|++.||.+++.+|+.++..++
T Consensus 185 v~~-~~l~~~a~~~a~~ia~~~~~a~~~~K~~~~~~~~ 221 (222)
T PRK05869 185 VAP-DDVYDAAAAWARRFLDGPPHALAAAKAGISDVYE 221 (222)
T ss_pred eCc-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhh
Confidence 997 8999999999999999999999999999987653
|
|
| >PLN02921 naphthoate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=314.97 Aligned_cols=221 Identities=24% Similarity=0.252 Sum_probs=186.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|+.++.|+++++|||+|.| ++||+|+|++++..... ... .....+ ....++..|.++||||||
T Consensus 98 eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~~-----~~~----~~~~~~--~~~~l~~~l~~~~kPvIA 166 (327)
T PLN02921 98 ELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGY-----VGP----DDAGRL--NVLDLQIQIRRLPKPVIA 166 (327)
T ss_pred HHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcccc-----cch----hHHHHH--HHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999999 89999999987642100 000 000111 123467788999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|+++|++++|+||+++||||+
T Consensus 167 aVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~-~~A~ellltG~~~~A~eA~~~GLV~~ 245 (327)
T PLN02921 167 MVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQ-KKAREMWFLARFYTASEALKMGLVNT 245 (327)
T ss_pred EECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHCCCceE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
++|. +++.+++.+++++|+..+|.+++.+|+.++...+. .......+.......+.++|++|++.++..+|+..
T Consensus 246 vv~~-~~l~~~a~~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~s~d~~egi~Af~ekr~p~ 319 (327)
T PLN02921 246 VVPL-DELEGETVKWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYGSEEGNEGRTAYLEGRAPD 319 (327)
T ss_pred EeCH-HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCC
Confidence 9997 89999999999999999999999999999887553 33333333345555678999999999999877544
|
|
| >PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=319.88 Aligned_cols=224 Identities=24% Similarity=0.341 Sum_probs=193.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.+++++++.|++|++|||+|.| ++||+|+|++++...... .+. .....++...++++.++..+|||+||
T Consensus 34 ~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~i~~~~kPvIA 105 (342)
T PRK05617 34 AIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARA----GDP----LAADRFFREEYRLNALIARYPKPYIA 105 (342)
T ss_pred HHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhcc----CCc----hhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 477899999999999999999999 999999999987532110 000 00012233345677889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+++.| ..+++|++||++++|+||+++||||+
T Consensus 106 aVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g--~~a~~llltG~~i~A~eA~~~GLv~~ 183 (342)
T PRK05617 106 LMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPG--ALGTYLALTGARISAADALYAGLADH 183 (342)
T ss_pred EEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhccc--HHHHHHHHcCCCCCHHHHHHcCCcce
Confidence 9999999999999999999999999999999999999999999999999866 47999999999999999999999999
Q ss_pred ccCChhHHHHH--------------------------------------------------------------HHHHHHH
Q psy14406 160 LYDDKESLLAG--------------------------------------------------------------AIELGEL 177 (275)
Q Consensus 160 vv~~~~~l~~~--------------------------------------------------------------a~~~a~~ 177 (275)
++|+ +++.+. +.+++++
T Consensus 184 vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~~ 262 (342)
T PRK05617 184 FVPS-ADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTADT 262 (342)
T ss_pred ecCH-HHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHHH
Confidence 9997 788776 8889999
Q ss_pred HhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccc-ccccCC
Q psy14406 178 IASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPER-MSHDCP 235 (275)
Q Consensus 178 la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~-~~~~sp 235 (275)
|++.+|.+++.+|+.++.....++++.++.+.......+.++|+.+|+.+++ .+++.|
T Consensus 263 i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~egv~afl~ek~r~p 321 (342)
T PRK05617 263 LRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLRSPDFVEGVRAVLIDKDRNP 321 (342)
T ss_pred HHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCchhhccceEEEcCCCCC
Confidence 9999999999999999998888999999999888888889999999999997 442445
|
|
| >PRK08321 naphthoate synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=307.47 Aligned_cols=228 Identities=22% Similarity=0.253 Sum_probs=185.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-------CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHH-HHHHHHHHHHhhc
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-------KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL-ITTYQKSISSLER 72 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-------~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 72 (275)
+|.+++++++.|++|++|||+|.| ++||+|+|++++.....+.......... ..... ......+...+..
T Consensus 56 ~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 133 (302)
T PRK08321 56 ELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRDGYQYAEGDEADTV--DPARAGRLHILEVQRLIRF 133 (302)
T ss_pred HHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccccccccccccccch--hhhHHHHHHHHHHHHHHHc
Confidence 478899999999999999999998 5999999998753210000000000000 00001 0112345677889
Q ss_pred CCCcEEEEECchhchHHHHHHHHCCEEEEe-CCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHH
Q psy14406 73 CPKPVISAVHGACIGGGMSLITAADIRYAT-KDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEA 151 (275)
Q Consensus 73 ~~kP~Ia~v~G~a~GgG~~lal~~D~rva~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA 151 (275)
+||||||+|||+|+|||++|+++||+||++ ++++|++||+++|++|+++++++|++++|+ .++++|++||++++|+||
T Consensus 134 ~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~-~~A~~l~ltG~~~~A~eA 212 (302)
T PRK08321 134 MPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQ-KFAREIFFLGRTYSAEEA 212 (302)
T ss_pred CCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCH-HHHHHHHHcCCccCHHHH
Confidence 999999999999999999999999999999 689999999999999999999999999995 899999999999999999
Q ss_pred HHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccc
Q psy14406 152 RECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMS 231 (275)
Q Consensus 152 ~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~ 231 (275)
+++||||++||+ +++.+++.+++++|+..+|.+++.+|+.++.... ........+...+...+.+++.++++..+..+
T Consensus 213 ~~~GLv~~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~~~d~~egi~af~ek 290 (302)
T PRK08321 213 HDMGAVNAVVPH-AELETEALEWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRLAYMTDEAQEGRDAFLEK 290 (302)
T ss_pred HHCCCceEeeCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHHHhcCHHHHHHHHHHhcc
Confidence 999999999997 8899999999999999999999999999987655 33333444555666678899999999999887
Q ss_pred cc
Q psy14406 232 HD 233 (275)
Q Consensus 232 ~~ 233 (275)
|+
T Consensus 291 r~ 292 (302)
T PRK08321 291 RD 292 (302)
T ss_pred CC
Confidence 64
|
|
| >KOG1684|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-43 Score=307.49 Aligned_cols=244 Identities=20% Similarity=0.270 Sum_probs=194.1
Q ss_pred HHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 3 GECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 3 ~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
.-.|..|+.++.+++||+.|.| ++||+|+|++.......+ ......+.++...|.+.+.+.++.||+||.+
T Consensus 71 ~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d--------~~~~~~~~fF~~eYsl~~~igtY~KP~Valm 142 (401)
T KOG1684|consen 71 YPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKD--------KETPEVKKFFTEEYSLNHLIGTYLKPYVALM 142 (401)
T ss_pred HHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhc--------CCchHHHHHHHHHHHHHHHHHHhcCceEEEe
Confidence 3578999999999999999996 999999999865432221 1112457888999999999999999999999
Q ss_pred CchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccccc
Q psy14406 82 HGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLY 161 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv 161 (275)
||+.||||++|+++.-||||||++.|+|||+.||++||+|++|+|+|+.| ..+.||.|||.++++.||+..||++|+|
T Consensus 143 dGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg--~lg~YLgLTG~rl~GaD~~~~GlATHyv 220 (401)
T KOG1684|consen 143 DGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG--YLGLYLGLTGQRLSGADALRCGLATHYV 220 (401)
T ss_pred eceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc--HHHHhhhhccceecchHHHHhcchhhcc
Confidence 99999999999999999999999999999999999999999999999999 4899999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHhcCCHHHHH------------------HHHHHHHhhh-cCCHHHHHHHHHHHhhcccCCchHH
Q psy14406 162 DDKESLLAGAIELGELIASKSPVAVQ------------------GTKKTLVFSR-DHAVEEGLNQVDKESKNGCDRRNCN 222 (275)
Q Consensus 162 ~~~~~l~~~a~~~a~~la~~~~~a~~------------------~~K~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~ 222 (275)
++ ++|..--.++...+...|...+. ..-..++..+ ..+++++++.....+. ....+.+
T Consensus 221 ~S-~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~~tVeeIie~lk~~q~--~~~~~ew 297 (401)
T KOG1684|consen 221 PS-EKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSANTVEEIIEALKNYQQ--SADGSEW 297 (401)
T ss_pred ch-hhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhccccHHHHHHHHHHHhh--hhhHHHH
Confidence 98 66543333333222222212222 2222233222 1277888886655443 2334456
Q ss_pred hccccccccccCCcchhhHHHHHhccCccChHHHHHH
Q psy14406 223 KGVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDED 259 (275)
Q Consensus 223 e~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~ 259 (275)
+.-+.+.+.+.||+||+||+|+|++|+.+++++||-.
T Consensus 298 ak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~ 334 (401)
T KOG1684|consen 298 AKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTM 334 (401)
T ss_pred HHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHH
Confidence 7788999999999999999999999999999999964
|
|
| >PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=297.97 Aligned_cols=217 Identities=18% Similarity=0.162 Sum_probs=182.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++ +++++|||+|.|++||+|+|++++...... .. . .......++.++.++.++||||||+
T Consensus 35 ~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~-----~~-~----~~~~~~~~~~~~~~l~~~~kPvIaa 102 (255)
T PRK07112 35 ECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPDA-----GR-A----DLIDAEPLYDLWHRLATGPYVTIAH 102 (255)
T ss_pred HHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhcccc-----ch-h----hhhhHHHHHHHHHHHHcCCCCEEEE
Confidence 4677888887 479999999999999999999987432110 00 0 0011233456788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+++ +.+|++++|+ .++++++++|++++|+||+++||||++
T Consensus 103 v~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 180 (255)
T PRK07112 103 VRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGT-QKAHYMTLMTQPVTAQQAFSWGLVDAY 180 (255)
T ss_pred EecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCH-HHHHHHHHhCCcccHHHHHHcCCCcee
Confidence 99999999999999999999999999999999999999865 4679999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|+ ++. .+.+++++++..+|.+++.+|+.++.. ...+.+.++.+.......+.++|+++++..+..+|+..
T Consensus 181 v~~-~~~--~~~~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~eg~~af~~kr~p~ 251 (255)
T PRK07112 181 GAN-SDT--LLRKHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFADPENLRKIARYVETGKFP 251 (255)
T ss_pred cCc-HHH--HHHHHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHcChHHHHHHHHHHcCCCCC
Confidence 987 442 578899999999999999999999875 44688888888777777889999999999999877543
|
|
| >PRK08272 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=304.35 Aligned_cols=242 Identities=21% Similarity=0.232 Sum_probs=184.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHH-----------HHHH--HHHHHHHHHHHHH
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVA-----------RKSK--ILRKLITTYQKSI 67 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~-----------~~~~--~~~~~~~~~~~~~ 67 (275)
||.++|++++.|++|++|||+|.|++||+|+||+++.............. .... ....++..+++++
T Consensus 41 eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (302)
T PRK08272 41 ELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGF 120 (302)
T ss_pred HHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhcccccccccccccccccccccccccccchhhHHHHHHHHHHH
Confidence 57889999999999999999999999999999998754211000000000 0000 0012344566778
Q ss_pred HHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCC
Q psy14406 68 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIE 147 (275)
Q Consensus 68 ~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~ 147 (275)
..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|.+|+. ..+++++|+ .++++|++||++++
T Consensus 121 ~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~---~~~~~~vG~-~~A~~llltG~~i~ 196 (302)
T PRK08272 121 MSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPAT---GMWAYRLGP-QRAKRLLFTGDCIT 196 (302)
T ss_pred HHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChH---HHHHHHhhH-HHHHHHHHcCCccC
Confidence 88999999999999999999999999999999999999999999998666643 357889995 89999999999999
Q ss_pred HHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCC-HHHH--HHHHHHHhhcccCCchHHhc
Q psy14406 148 AAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHA-VEEG--LNQVDKESKNGCDRRNCNKG 224 (275)
Q Consensus 148 a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~-~~~~--l~~~~~~~~~~~~~~~~~e~ 224 (275)
|+||+++||||++||+ +++.+++.+++++|+..||.+++.+|+.++..++.. .... +......
T Consensus 197 a~eA~~~GLv~~vv~~-~~l~~~a~~la~~ia~~~~~a~~~~K~~l~~~~~~~g~~~~~~~~~~~~~------------- 262 (302)
T PRK08272 197 GAQAAEWGLAVEAVPP-EELDERTERLVERIAAVPVNQLAMVKLAVNSALLQQGVATSQMLATVFDG------------- 262 (302)
T ss_pred HHHHHHcCCCceecCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-------------
Confidence 9999999999999997 899999999999999999999999999999876532 1111 1111110
Q ss_pred cccccccccCCcchhhHHHHHhccCccChHHHHHHHHHhhccccc
Q psy14406 225 VSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDLALLFGGKHR 269 (275)
Q Consensus 225 ~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (275)
. .+.+|.. ..|. ++.+...++++++.+|.+||++.+
T Consensus 263 ~-----~~~~~~~--~~~~--~~~~~~~~~~a~~~rd~~~~~~~~ 298 (302)
T PRK08272 263 I-----ARHTPEG--HAFK--ADAAEHGFKEAVRERDEPFGDGGR 298 (302)
T ss_pred H-----HhcCchH--HHHH--HHHHHhhHHHHHhhcccccccccc
Confidence 1 1223321 2222 223356899999999999999877
|
|
| >KOG1679|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=283.79 Aligned_cols=221 Identities=29% Similarity=0.479 Sum_probs=204.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+++..|+.+|+|+|++.- +.||+|.||++-..+.+ .....|++.++.++..+.++|.||||
T Consensus 62 ~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms~------------~Ev~~fV~~lR~~~~dIe~Lp~P~IA 129 (291)
T KOG1679|consen 62 QLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMSP------------SEVTRFVNGLRGLFNDIERLPQPVIA 129 (291)
T ss_pred HHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCCH------------HHHHHHHHHHHHHHHHHHhCCcccee
Confidence 367899999999999999999876 99999999999766543 23456788888999999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|+|.++|||++|+++||+||++++++|+++|++++++|+.|++++|||.+|. +.+++|++|++.+++.||...|||||
T Consensus 130 AidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~-alaKELIftarvl~g~eA~~lGlVnh 208 (291)
T KOG1679|consen 130 AIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGV-ALAKELIFTARVLNGAEAAKLGLVNH 208 (291)
T ss_pred hhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhH-HHHHhHhhhheeccchhHHhcchHHH
Confidence 99999999999999999999999999999999999999999999999999995 99999999999999999999999999
Q ss_pred ccCCh---hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDK---ESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~---~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|... +.....+.++|++|....|.+++..|..++...+.++...+..++.-+.....+.|.-||+.++..+|.+
T Consensus 209 vv~qneegdaa~~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~t~drLeglaaf~ekr~p 286 (291)
T KOG1679|consen 209 VVEQNEEGDAAYQKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIPTKDRLEGLAAFKEKRKP 286 (291)
T ss_pred HHhcCccccHHHHHHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCcHHHHHHHHHHHHhhcCC
Confidence 99763 3567779999999999999999999999999999999999999999999999999999999999998754
|
|
| >TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=319.75 Aligned_cols=222 Identities=20% Similarity=0.229 Sum_probs=195.1
Q ss_pred CHHHHHHHhh-hCCCceEEEEeeCCCC-cccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEE
Q psy14406 1 EIGECFDSLS-ENEECRVIILSAAGKI-FTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVI 78 (275)
Q Consensus 1 el~~~l~~~~-~d~~v~~vVl~g~G~~-FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~I 78 (275)
||.+++.+++ +|++||+|||+|.|+. ||+|+|++.... .. . ......+..+++++.+|..+|||+|
T Consensus 302 ~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~~~-~~------~-----~~~~~~~~~~~~~~~~l~~~~kpvi 369 (546)
T TIGR03222 302 ELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLEAH-KD------H-----WFVRETIGYLRRTLARLDVSSRSLF 369 (546)
T ss_pred HHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCcccccc-cc------c-----hhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999998 4599999999999977 999999984211 00 0 0111222334567889999999999
Q ss_pred EEE-CchhchHH-HHHHHHCCEEEE-------eCCceEeccccccCcccCchhhhhhhHHh-CcHHHH--HHHHhcCCCC
Q psy14406 79 SAV-HGACIGGG-MSLITAADIRYA-------TKDAWFTLKEVDIGLTADVGALQRLPRII-GNQSLV--NEIAFTARKI 146 (275)
Q Consensus 79 a~v-~G~a~GgG-~~lal~~D~rva-------~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-G~~~~a--~~l~ltG~~~ 146 (275)
|+| ||+|+||| ++|+++||+||+ +++++|++||+++|++|++|++++|++++ |. .++ +++++||+++
T Consensus 370 Aav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~L~~~v~G~-~~a~~~~~~ltg~~i 448 (546)
T TIGR03222 370 ALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSRLATRFYAE-PAPVAAVRDKIGQAL 448 (546)
T ss_pred EEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHHHHHHhcCc-hhHHHHHHHHhCCCC
Confidence 999 89999999 999999999999 89999999999999999999999999998 95 778 5599999999
Q ss_pred CHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHH-HHHHHHHhhcccCCchHHh--
Q psy14406 147 EAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEG-LNQVDKESKNGCDRRNCNK-- 223 (275)
Q Consensus 147 ~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~e-- 223 (275)
+|+||+++|||++++|+ +++.+++.+++++|++.+|.+++.+|+.++.....+++.. +..+..++...+.++|..|
T Consensus 449 ~A~eA~~~Glv~~vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~ 527 (546)
T TIGR03222 449 DAEEAERLGLVTAAPDD-IDWEDEIRIALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTAWQNWIFNRPNAVGEN 527 (546)
T ss_pred CHHHHHHcCCcccccCc-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHHHHHHHhcCCcccchh
Confidence 99999999999999998 8999999999999999999999999999999999999999 9999888888889999999
Q ss_pred -ccccccccccCCc
Q psy14406 224 -GVSPERMSHDCPE 236 (275)
Q Consensus 224 -~~~~~~~~~~sp~ 236 (275)
|+.++..+|+.-+
T Consensus 528 ~g~~af~ekr~p~f 541 (546)
T TIGR03222 528 GALKVYGSGKKAQF 541 (546)
T ss_pred hHHHHHccCCCCCC
Confidence 9999999887543
|
In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH. |
| >PRK08788 enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=295.67 Aligned_cols=206 Identities=18% Similarity=0.195 Sum_probs=167.5
Q ss_pred CHHHHHHHhhh-----CCCceEEEEeeC-CCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh---
Q psy14406 1 EIGECFDSLSE-----NEECRVIILSAA-GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLE--- 71 (275)
Q Consensus 1 el~~~l~~~~~-----d~~v~~vVl~g~-G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--- 71 (275)
||.+++++++. |++|++|||+|. |++||+|+|++++...... .+. ..+..+...+...+.++.
T Consensus 47 eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~l~~~~ 118 (287)
T PRK08788 47 DIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRA----GDR----DALLAYARACVDGVHAFHRGF 118 (287)
T ss_pred HHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhccc----cch----HHHHHHHHHHHHHHHHHHHhc
Confidence 57889999988 899999999999 6999999999987431110 000 001111112222233332
Q ss_pred cCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHH
Q psy14406 72 RCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEA 151 (275)
Q Consensus 72 ~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA 151 (275)
.+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||
T Consensus 119 ~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~-~~A~ellltG~~l~A~eA 197 (287)
T PRK08788 119 GAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGP-KLAEELILSGKLYTAEEL 197 (287)
T ss_pred CCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhH-HHHHHHHHcCCCCCHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999995 899999999999999999
Q ss_pred HHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccC
Q psy14406 152 RECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCD 217 (275)
Q Consensus 152 ~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~ 217 (275)
+++||||+++|+ +++.+++.+++++|+.. |.+....|+.++.....++++.++.+..+.....+
T Consensus 198 ~~~GLV~~vv~~-~el~~~a~~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (287)
T PRK08788 198 HDMGLVDVLVED-GQGEAAVRTFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQ 261 (287)
T ss_pred HHCCCCcEecCc-hHHHHHHHHHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhh
Confidence 999999999997 89999999999999987 77777777777776666888888877665443333
|
|
| >PRK08290 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=296.16 Aligned_cols=212 Identities=27% Similarity=0.405 Sum_probs=172.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhH-------H---HHHHHHHHHHHHHHHHHHHHHh
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE-------D---VARKSKILRKLITTYQKSISSL 70 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~l 70 (275)
||.+++++++.|+++++|||||.|++||+|+|++++........... + ..............+.+++..+
T Consensus 35 eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 114 (288)
T PRK08290 35 ELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRW 114 (288)
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999998632110000000 0 0000001112233455677889
Q ss_pred hcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHH
Q psy14406 71 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAE 150 (275)
Q Consensus 71 ~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~e 150 (275)
.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |+ .+++++++++|+ .++++|++||++++|+|
T Consensus 115 ~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~-~~~~~l~~~iG~-~~A~~llltG~~i~A~e 191 (288)
T PRK08290 115 RDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PG-VEYFAHPWELGP-RKAKELLFTGDRLTADE 191 (288)
T ss_pred HhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Cc-chHHHHHHHhhH-HHHHHHHHcCCCCCHHH
Confidence 9999999999999999999999999999999999999999999998 44 346778999995 89999999999999999
Q ss_pred HHHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcC-CHHHHHHHHHHHhhccc
Q psy14406 151 ARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDH-AVEEGLNQVDKESKNGC 216 (275)
Q Consensus 151 A~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~l~~~~~~~~~~~ 216 (275)
|+++||||++|++ +++.+++.+++++|++.||.+++.+|+.++...+. ++++.+..+.......+
T Consensus 192 A~~~GLV~~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (288)
T PRK08290 192 AHRLGMVNRVVPR-DELEAETLELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLHQLGH 257 (288)
T ss_pred HHHCCCccEeeCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHcc
Confidence 9999999999997 89999999999999999999999999999988765 68888887766544443
|
|
| >PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=317.87 Aligned_cols=220 Identities=21% Similarity=0.241 Sum_probs=193.1
Q ss_pred CHHHHHHHhhh-CCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEE
Q psy14406 1 EIGECFDSLSE-NEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVI 78 (275)
Q Consensus 1 el~~~l~~~~~-d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~I 78 (275)
||.+++++++. |++||+|||+|.| ++||+|+|++... ... .. ........++.++.+|..+|||||
T Consensus 306 eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~-~~~------~~-----~~~~~~~~~~~~~~~l~~~~kPvI 373 (550)
T PRK08184 306 ELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLA-HKD------HW-----LVRETRGYLRRTLKRLDVTSRSLF 373 (550)
T ss_pred HHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhc-ccc------hH-----HHHHHHHHHHHHHHHHHhCCCCEE
Confidence 47788999986 7999999999999 5999999987321 110 00 001122344557889999999999
Q ss_pred EEEC-chhchHH-HHHHHHCCEEEEe-------CCceEeccccccCcccCchhhhhhhHH-hCcHHHHHHH--HhcCCCC
Q psy14406 79 SAVH-GACIGGG-MSLITAADIRYAT-------KDAWFTLKEVDIGLTADVGALQRLPRI-IGNQSLVNEI--AFTARKI 146 (275)
Q Consensus 79 a~v~-G~a~GgG-~~lal~~D~rva~-------~~a~f~~pe~~~G~~p~~g~~~~l~r~-~G~~~~a~~l--~ltG~~~ 146 (275)
|+|| |+|+||| ++|+++||+||++ ++++|++||+++|++|++|++++|+++ +|+ .+++++ ++||+++
T Consensus 374 AaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~~L~r~~vG~-~~A~~~~l~~tg~~i 452 (550)
T PRK08184 374 ALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLSRLARRFYGE-PDPLAAVRAKIGQPL 452 (550)
T ss_pred EEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHHHhHHHhcCh-HHHHHHHHHHhCCcC
Confidence 9997 9999999 9999999999999 999999999999999999999999998 696 888887 5899999
Q ss_pred CHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHH-HHHHHHHhhcccCCchHHh--
Q psy14406 147 EAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEG-LNQVDKESKNGCDRRNCNK-- 223 (275)
Q Consensus 147 ~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~e-- 223 (275)
+|+||+++||||+++|+ +++.+++.+++++|++.||.+++.+|+.++.....++++. +..+..++...+.++|.+|
T Consensus 453 ~A~eA~~~GLv~~vv~~-~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~ 531 (550)
T PRK08184 453 DADAAEELGLVTAAPDD-IDWEDEVRIALEERASLSPDALTGMEANLRFAGPETMETRIFGRLTAWQNWIFQRPNAVGEK 531 (550)
T ss_pred CHHHHHHcCCcccccCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 99999999999999997 8999999999999999999999999999999999999999 8998888888889999999
Q ss_pred -ccccccccccC
Q psy14406 224 -GVSPERMSHDC 234 (275)
Q Consensus 224 -~~~~~~~~~~s 234 (275)
|+.++..+|+.
T Consensus 532 ~g~~af~ekr~~ 543 (550)
T PRK08184 532 GALKVYGTGQKA 543 (550)
T ss_pred hHHHHhccCCCC
Confidence 99999998764
|
|
| >PRK06213 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=287.39 Aligned_cols=193 Identities=24% Similarity=0.288 Sum_probs=169.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++ +++++|||+|.|++||+|+|++++... . .....+...+++++.++.++||||||+
T Consensus 33 ~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-~------------~~~~~~~~~~~~l~~~l~~~~kPvIAa 97 (229)
T PRK06213 33 ALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-A------------QAAIALLTAGSTLARRLLSHPKPVIVA 97 (229)
T ss_pred HHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-h------------HhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678888877 567999999999999999999987421 0 011234455667788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+|||++|+++|||||++++ ++|++||+++|++|+.++.+++++++|. ..+++++++|++++|+||+++||||+
T Consensus 98 v~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~-~~a~~lll~g~~~~a~eA~~~Glv~~ 176 (229)
T PRK06213 98 CTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTP-SAFQRAVINAEMFDPEEAVAAGFLDE 176 (229)
T ss_pred EcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCH-HHHHHHHHcCcccCHHHHHHCCCcee
Confidence 999999999999999999999999 9999999999999888888889999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDK 210 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~ 210 (275)
++|+ +++.+++.+++++++..+|.+++.+|+.++.....++.+.++.+..
T Consensus 177 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~ 226 (229)
T PRK06213 177 VVPP-EQLLARAQAAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAA 226 (229)
T ss_pred ccCh-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhh
Confidence 9997 8999999999999999999999999999998766667766666544
|
|
| >PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=324.54 Aligned_cols=223 Identities=24% Similarity=0.342 Sum_probs=192.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++++.++.|++|++|||+|.|++||+|+|++++...... + ......+...++.++.++..+|||+||+
T Consensus 38 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~i~~~~kPvIAa 108 (715)
T PRK11730 38 SLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAA-----P----EEELSQWLHFANSIFNRLEDLPVPTVAA 108 (715)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhccC-----C----HHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478899999999999999999999999999999987532100 0 0112234445667788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. .++++|++||++++|+||+++||||++
T Consensus 109 v~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~-~~A~~llltG~~~~A~eA~~~GLv~~v 187 (715)
T PRK11730 109 INGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGA-DNALEWIAAGKDVRAEDALKVGAVDAV 187 (715)
T ss_pred ECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCH-HHHHHHHHcCCcCCHHHHHHCCCCeEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcC------------CHH---------HHHHHHH------------------HHHhhhcCCH
Q psy14406 161 YDDKESLLAGAIELGELIASK------------SPV---------AVQGTKK------------------TLVFSRDHAV 201 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~------------~~~---------a~~~~K~------------------~l~~~~~~~~ 201 (275)
||+ +++.+++.+++++++.. +|. +++.+|+ .++.....++
T Consensus 188 v~~-~~l~~~a~~~a~~la~~~~~~~~~~~~~~~p~a~~~~~~~~~~~~~k~~~~~~~~~~~pa~~~~~~~i~~~~~~~~ 266 (715)
T PRK11730 188 VAP-EKLQEAALALLKQAIAGKLDWKARRQPKLEPLKLSKIEAMMSFTTAKGMVAQKAGKHYPAPMTAVKTIEAAAGLGR 266 (715)
T ss_pred cCH-HHHHHHHHHHHHHHhhcCCccccccCcccccccccchhHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHhcCCH
Confidence 997 89999999999999865 354 4466664 5677777789
Q ss_pred HHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 202 EEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++.++.+...+...+.++|+++++.++..++.+
T Consensus 267 ~~~l~~E~~~~~~~~~s~d~~egi~aF~~~~~~ 299 (715)
T PRK11730 267 DEALELEAKGFVKLAKTNVARALVGIFLNDQYV 299 (715)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 999999999888899999999999887776544
|
|
| >TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=294.25 Aligned_cols=227 Identities=22% Similarity=0.281 Sum_probs=181.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+.++.|++|++|||+|.| ++||+|+|++++...... . ......+...+++++..+..+||||||
T Consensus 59 eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~~-----~----~~~~~~~~~~~~~l~~~i~~~pKPVIA 129 (360)
T TIGR03200 59 AIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYAG-----N----PQEYRQYMRLFNDMVSAILGCDKPVIC 129 (360)
T ss_pred HHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhccc-----C----hhHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999 799999999987532110 0 011223444556778899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. .++++++++|++++|+||+++||||+
T Consensus 130 AVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~-~rA~~llltGe~~sA~EA~~~GLVd~ 208 (360)
T TIGR03200 130 RVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGC-EQAMVSGTLCEPWSAHKAKRLGIIMD 208 (360)
T ss_pred EECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCH-HHHHHHHHhCCcCcHHHHHHcCChhe
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHH------------HHHHHHHHHHHhcCCHH--HHHHHHHHHHhhh--cCCHHHHHHHHHHHhhcccCCchHHh
Q psy14406 160 LYDDKESL------------LAGAIELGELIASKSPV--AVQGTKKTLVFSR--DHAVEEGLNQVDKESKNGCDRRNCNK 223 (275)
Q Consensus 160 vv~~~~~l------------~~~a~~~a~~la~~~~~--a~~~~K~~l~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~e 223 (275)
++|+ .++ ++.+.++++.+...++. +++..|..++... ...+++..+.....
T Consensus 209 VVp~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~l~~~~~~l~~~------------ 275 (360)
T TIGR03200 209 VVPA-LKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGTIDLSLLDEAVEALCAK------------ 275 (360)
T ss_pred ecCc-hhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcccchHhHHHHHHHHHHHH------------
Confidence 9997 788 77888889999988877 9999999888642 11233332221111
Q ss_pred ccccccccccCCcchhhHHHHHhccCccChHHH
Q psy14406 224 GVSPERMSHDCPECLIGSIGVFHTLDRVDLNQC 256 (275)
Q Consensus 224 ~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~ 256 (275)
+.+..|.|+.-+++.++.-..+.|.+.
T Consensus 276 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (360)
T TIGR03200 276 ------LLNTFPECLTKSIEELRKPKLFAWNQN 302 (360)
T ss_pred ------HHHhchHHHHHHHHHhhhHHHHHHHhh
Confidence 234557777777777765544455443
|
Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=314.30 Aligned_cols=220 Identities=25% Similarity=0.381 Sum_probs=191.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.+++++++.|+++++|||+|.+ ++||+|+|++++..... .+ ....+...++.++.+|.++||||||
T Consensus 38 ~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~~-----~~------~~~~~~~~~~~~~~~i~~~~kPvIA 106 (708)
T PRK11154 38 QVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACKT-----AQ------EAEALARQGQQLFAEIEALPIPVVA 106 (708)
T ss_pred HHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccCC-----HH------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999875 89999999998753211 00 0112334456678899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCC--ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|++++|. .++++|++||++++|+||+++|||
T Consensus 107 aV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~-~~A~~llltG~~i~a~eA~~~GLv 185 (708)
T PRK11154 107 AIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGV-STALDMILTGKQLRAKQALKLGLV 185 (708)
T ss_pred EECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCH-HHHHHHHHhCCcCCHHHHHHCCCC
Confidence 9999999999999999999999987 4899999999999999999999999995 899999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHH-------------HhcCCHH----------------------HHHHHHHHHHhhhcCCHH
Q psy14406 158 SKLYDDKESLLAGAIELGEL-------------IASKSPV----------------------AVQGTKKTLVFSRDHAVE 202 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~-------------la~~~~~----------------------a~~~~K~~l~~~~~~~~~ 202 (275)
|+++++ +++.+++.+++++ +++.+|. ++..+|+.++.....+++
T Consensus 186 ~~vv~~-~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~ 264 (708)
T PRK11154 186 DDVVPH-SILLEVAVELAKKGKPARRPLPVRERLLEGNPLGRALLFKQARKKTLAKTQGNYPAPERILDVVRTGLEKGMS 264 (708)
T ss_pred cEecCh-HHHHHHHHHHHHhcCCccCcCCchhhhcccCchhHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcCCHH
Confidence 999997 8999999999988 4566554 788999999998888999
Q ss_pred HHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 203 EGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+.+..+...+...+.++++++++.++...+.
T Consensus 265 ~~l~~E~~~~~~~~~s~~~~~~~~aF~~~~~ 295 (708)
T PRK11154 265 SGYEAEARAFGELAMTPESAALRSIFFATTE 295 (708)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999888888999999999877765543
|
|
| >TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=313.15 Aligned_cols=219 Identities=26% Similarity=0.388 Sum_probs=188.8
Q ss_pred CHHHHHHHhhhCCCceEEEE-eeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIIL-SAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl-~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|++++.|++|++||| +|.|++||+|+|++++..... .. ....+...++.++.++.++||||||
T Consensus 33 eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~~~-----~~------~~~~~~~~~~~~~~~l~~~~kPvIA 101 (699)
T TIGR02440 33 QVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAACQT-----AG------EAKALAQQGQVLFAELEALPIPVVA 101 (699)
T ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhccCC-----hh------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 57889999999999999986 678899999999998743211 00 1122344556778889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCC--ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|++++|. .++++|++||++++++||+++|||
T Consensus 102 aVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~-~~A~~llltG~~~~a~eA~~~GLV 180 (699)
T TIGR02440 102 AIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGV-STALDMILTGKQLRAKQALKLGLV 180 (699)
T ss_pred EECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCH-HHHHHHHHcCCcCCHHHHHhCCCC
Confidence 9999999999999999999999986 7999999999999999999999999995 899999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHH-------------HHhcCCHHH----------------------HHHHHHHHHhhhcCCHH
Q psy14406 158 SKLYDDKESLLAGAIELGE-------------LIASKSPVA----------------------VQGTKKTLVFSRDHAVE 202 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~-------------~la~~~~~a----------------------~~~~K~~l~~~~~~~~~ 202 (275)
|+++|+ +++.+++.++++ +++..+|.+ ...+|+.++.....+++
T Consensus 181 ~~vv~~-~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~ 259 (699)
T TIGR02440 181 DDVVPQ-SILLDTAVEMALKGKPIRKPLSLQERLLEGTPLGRALLFDQAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQ 259 (699)
T ss_pred cEecCh-hHHHHHHHHHHHhCCCCCCCccchhhhcccCchhHHHHHHHHHHHHHHhcccCChhHHHHHHHHHHHhcCCHH
Confidence 999997 889999999997 577776655 44566678888888999
Q ss_pred HHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 203 EGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++++.|...+...+.+++.++++.++...+
T Consensus 260 ~~l~~E~~~~~~~~~s~~~~~~~~~f~~~~ 289 (699)
T TIGR02440 260 KGLDAEARAFGELVMTPESAALRSIFFATT 289 (699)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999999999999999999999987766543
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog. |
| >PLN02267 enoyl-CoA hydratase/isomerase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=273.79 Aligned_cols=185 Identities=26% Similarity=0.371 Sum_probs=154.8
Q ss_pred CHHHHHHHhhhCCCce-EEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~-~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.+++++++.|++++ +||++|.|++||+|+|++++..... .. .....+...+++++.++.++||||||
T Consensus 30 eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~~~------~~----~~~~~~~~~~~~~~~~l~~~~kPvIA 99 (239)
T PLN02267 30 SIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAAGS------AP----SRLHLMVAKLRPLVADLISLPMPTIA 99 (239)
T ss_pred HHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcccc------CH----HHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 5788999999999875 7778999999999999987642111 00 01122344566778899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEe-CCceEeccccccCcccCchhhhhhhHHhCcHHHH-HHHHhcCCCCCHHHHHHcCCc
Q psy14406 80 AVHGACIGGGMSLITAADIRYAT-KDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLV-NEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a-~~l~ltG~~~~a~eA~~~GLv 157 (275)
+|||+|+|||++|+++||+||++ ++++|++||+++|+.|+.+++++|++++|. .++ ++++++|++++|+||+++|||
T Consensus 100 aV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~-~~a~~~llltG~~~~a~eA~~~Glv 178 (239)
T PLN02267 100 AVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGS-PAARRDVLLRAAKLTAEEAVEMGIV 178 (239)
T ss_pred EECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcCh-HHHHHHHHHcCCcCCHHHHHHCCCc
Confidence 99999999999999999999998 568999999999997444457899999996 778 699999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhh
Q psy14406 158 SKLYDDKESLLAGAIELGELIASK--SPVAVQGTKKTLVFS 196 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~--~~~a~~~~K~~l~~~ 196 (275)
|+++++.+++.+++.++|++|++. ++.++..+|+.++..
T Consensus 179 ~~vv~~~~~l~~~a~~~A~~ia~~~~~~~~~~~~k~~~~~~ 219 (239)
T PLN02267 179 DSAHDSAEETVEAAVRLGEELAARKWNGEVYASIRKSLLPE 219 (239)
T ss_pred ceecCCHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHH
Confidence 999985468999999999999987 668899999988654
|
|
| >TIGR02437 FadB fatty oxidation complex, alpha subunit FadB | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=299.64 Aligned_cols=222 Identities=22% Similarity=0.286 Sum_probs=178.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+++++|||+|.|++||+|+|++++...... + . .....++...++++.+|.++||||||+
T Consensus 38 eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~--~-----~~~~~~~~~~~~~~~~i~~~pkPvIAa 108 (714)
T TIGR02437 38 SLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFAL--P--D-----AELIQWLLFANSIFNKLEDLPVPTVAA 108 (714)
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhcccC--C--H-----HHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578899999999999999999999999999999988532100 0 0 011233444567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. .++++|++||++++|+||+++||||++
T Consensus 109 i~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~-~~A~~llltG~~~~A~eA~~~GLvd~v 187 (714)
T TIGR02437 109 INGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGA-DNALEWIASGKENRAEDALKVGAVDAV 187 (714)
T ss_pred ECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHCCCCcEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCC------------------HHH---HH------------------HHHHHHHhhhcCCH
Q psy14406 161 YDDKESLLAGAIELGELIASKS------------------PVA---VQ------------------GTKKTLVFSRDHAV 201 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~------------------~~a---~~------------------~~K~~l~~~~~~~~ 201 (275)
++. +++.+.+.++++++.... +.. .. ..-..+..+...++
T Consensus 188 v~~-~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pap~~~~~~v~~~~~~~~ 266 (714)
T TIGR02437 188 VTA-DKLGAAALQLLKDAINGKLDWKAKRQPKLEPLKLSKIEAMMSFTTAKGMVAQVAGPHYPAPMTAVKTIEKAARFGR 266 (714)
T ss_pred eCh-hHHHHHHHHHHHHHhhcCCcccccCCCCcccccccchHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhcCCH
Confidence 997 889999999987743210 000 11 11122333444578
Q ss_pred HHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 202 EEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
++.++.|...+.....+++.++.+..|...|.
T Consensus 267 ~~gl~~E~~~f~~l~~s~~a~~l~~~ff~~r~ 298 (714)
T TIGR02437 267 DKALEIEAKGFVKLAKTSEAKALIGLFLNDQY 298 (714)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHhhhHh
Confidence 88999999998888899888877655555443
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399. |
| >KOG0016|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=256.99 Aligned_cols=223 Identities=23% Similarity=0.355 Sum_probs=197.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
++..+|+...+|+++..++++|.|+.||+|.|+..+..... .+..........+...+..+...+..+|||+||.
T Consensus 39 ~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~-----~d~~~~~~~~~~~v~~~~~~v~~fi~f~Kplia~ 113 (266)
T KOG0016|consen 39 YIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALD-----DDANEESDKASKFVKNVSCFVNTFINFPKPLVAL 113 (266)
T ss_pred HHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCC-----CcccccchhhHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 46789999999999999999999999999999998865433 1222222333444444445788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+++|.|+.+.-.||+++|+|+++|..|++++|+.|+++++|.||+++|. ..+.+|++.|++++|+||++.|||+++
T Consensus 114 vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~-~~A~E~ll~~~kltA~Ea~~~glVski 192 (266)
T KOG0016|consen 114 VNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGS-ASANEMLLFGEKLTAQEACEKGLVSKI 192 (266)
T ss_pred ecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhch-hhHHHHHHhCCcccHHHHHhcCchhhh
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 230 (275)
++. +.+.+.+...++++++.+|.+++..|++++......+..+.+.|.......|.++|..+.+.....
T Consensus 193 f~~-~tf~~~v~~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~s~e~~~~~~~~~~ 261 (266)
T KOG0016|consen 193 FPA-ETFNEEVLKKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWVSAECLARFKQYLS 261 (266)
T ss_pred cCh-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhccChHHHHHHHHHhc
Confidence 998 999999999999999999999999999999988888999999999988889999888777655443
|
|
| >TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=286.17 Aligned_cols=167 Identities=31% Similarity=0.506 Sum_probs=143.2
Q ss_pred CHHHHHHHhhhCCCceEE-EEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVI-ILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~v-Vl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++|++| |++|.|++||+|+||+++..... . .....+...++.++.++.++||||||
T Consensus 45 ~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~~~-----~------~~~~~~~~~~~~l~~~i~~~~kPvIA 113 (737)
T TIGR02441 45 EFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAACKT-----A------QEVTQLSQEGQEMFERIEKSQKPIVA 113 (737)
T ss_pred HHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhccCC-----h------HHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999965 56999999999999998853111 0 01223445567788899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCC--ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
+|||+|+|||++|+++|||||++++ ++|++||+++|++|++|++++|+|++|. .++++|++||++++|+||+++|||
T Consensus 114 av~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~-~~A~~l~ltG~~i~a~eA~~~GLV 192 (737)
T TIGR02441 114 AISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGV-PAALDMMLTGKKIRADRAKKMGIV 192 (737)
T ss_pred EECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCH-HHHHHHHHcCCcCCHHHHHHCCCC
Confidence 9999999999999999999999987 5899999999999999999999999996 899999999999999999999999
Q ss_pred ccccCCh------------hHHHHHHHHHHHHHh
Q psy14406 158 SKLYDDK------------ESLLAGAIELGELIA 179 (275)
Q Consensus 158 ~~vv~~~------------~~l~~~a~~~a~~la 179 (275)
|+++++. +++.+.+.+++..++
T Consensus 193 d~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~ 226 (737)
T TIGR02441 193 DQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLA 226 (737)
T ss_pred eEecCCcccccccchhhhHHHHHHHHHHHHHHhh
Confidence 9999851 457777777776654
|
Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). |
| >cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=244.47 Aligned_cols=165 Identities=43% Similarity=0.678 Sum_probs=150.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++++.++.|+++++|||+|.|+.||+|+|++++...... . ....++...+++++.++..+|||+||+
T Consensus 30 ~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~i~~~~~p~Ia~ 99 (195)
T cd06558 30 ELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDA-----G-----EEARAFIRELQELLRALLRLPKPVIAA 99 (195)
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccccc-----c-----hhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478899999999999999999999999999999998653321 0 024556778889999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|+|+.++++||+||++++++|++||+++|++|+.|++++|++++|. ..+++++++|++++++||+++|||+++
T Consensus 100 v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~-~~a~~~~l~g~~~~a~ea~~~Glv~~~ 178 (195)
T cd06558 100 VNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGP-ARARELLLTGRRISAEEALELGLVDEV 178 (195)
T ss_pred ECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCCCee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHH
Q psy14406 161 YDDKESLLAGAIELGEL 177 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~ 177 (275)
++. +++.+++.+++++
T Consensus 179 ~~~-~~l~~~a~~~a~~ 194 (195)
T cd06558 179 VPD-EELLAAALELARR 194 (195)
T ss_pred cCh-hHHHHHHHHHHhh
Confidence 998 8899999888865
|
This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. |
| >TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=269.37 Aligned_cols=172 Identities=21% Similarity=0.313 Sum_probs=144.2
Q ss_pred CHHHHHHHhh-hCCCceEEEEeeC-CCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHH-HHHHHHHHHhhcCCCcE
Q psy14406 1 EIGECFDSLS-ENEECRVIILSAA-GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI-TTYQKSISSLERCPKPV 77 (275)
Q Consensus 1 el~~~l~~~~-~d~~v~~vVl~g~-G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~kP~ 77 (275)
||.++|++++ .|+++|+|||||. |++||+|+|++++..... .... ....+. .....+...+.++||||
T Consensus 52 eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~~~~~~~------~~~~---~~~~~~~~~~~~i~~~i~~~pkPv 122 (546)
T TIGR03222 52 ELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFMLGLSTH------AWKV---NFCKFTNETRNGIEDSSRHSGLKF 122 (546)
T ss_pred HHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHHHhcccc------chhh---hHHHHHHHHHHHHHHHHHhCCCCE
Confidence 5788999998 7999999999987 499999999998742111 0000 001111 11223455677899999
Q ss_pred EEEECchhchHHHHHHHHCCEEEEeCC--ceEeccccc-cCcccCchhhhhhh--HHhCcHHHHHHHHhcCCCCCHHHHH
Q psy14406 78 ISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVD-IGLTADVGALQRLP--RIIGNQSLVNEIAFTARKIEAAEAR 152 (275)
Q Consensus 78 Ia~v~G~a~GgG~~lal~~D~rva~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r~~G~~~~a~~l~ltG~~~~a~eA~ 152 (275)
||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|++|++.+++ +++|+ .++++|++||++++|+||+
T Consensus 123 IAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg~-~~A~~llltG~~i~A~eA~ 201 (546)
T TIGR03222 123 LAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVRR-DHADIFCTIEEGVRGKRAK 201 (546)
T ss_pred EEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhCH-HHHHHHHHcCCCccHHHHH
Confidence 999999999999999999999999986 799999997 99999999999997 68995 8999999999999999999
Q ss_pred HcCCcccccCChhHHHHHHHHHHHHHhcCCH
Q psy14406 153 ECGLVSKLYDDKESLLAGAIELGELIASKSP 183 (275)
Q Consensus 153 ~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~ 183 (275)
++||||++||+ +++.+++.+++++|+..||
T Consensus 202 ~~GLV~~vv~~-~~l~~~a~~lA~~la~~~p 231 (546)
T TIGR03222 202 EWRLVDEVVKP-SQFDAAIAERAAELAAQSD 231 (546)
T ss_pred HcCCceEEeCh-HHHHHHHHHHHHHHHhCCC
Confidence 99999999997 8999999999999998876
|
In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH. |
| >COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=237.62 Aligned_cols=222 Identities=24% Similarity=0.279 Sum_probs=183.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeC--C-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcE
Q psy14406 1 EIGECFDSLSENEECRVIILSAA--G-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPV 77 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~--G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~ 77 (275)
||.++|..+..|++|.+|||||. | .+||+|+|-+---....- .. ++.. ..+ ...++-+.|+.+||||
T Consensus 50 Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY-~~-d~~~---~rL-----nvLdlQrlIR~~PKpV 119 (282)
T COG0447 50 EMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGY-VD-DDGI---PRL-----NVLDLQRLIRTMPKPV 119 (282)
T ss_pred HHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCc-cC-CccC---ccc-----chhhHHHHHHhCCcce
Confidence 68899999999999999999975 6 999999998653221100 00 0000 001 1234456678889999
Q ss_pred EEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 78 ISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 78 Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
||.|+|+++|||-.|-+.||+.||+++|+|+....++|-|-++.++.+|.|.+| +.+++++-+.++.++|+||+++|+|
T Consensus 120 iA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VG-qKkArEIwfLcR~Y~A~eal~MGlV 198 (282)
T COG0447 120 IAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVG-QKKAREIWFLCRQYDAEEALDMGLV 198 (282)
T ss_pred EEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhh-hhhhHHhhhhhhhccHHHHHhcCce
Confidence 999999999999999999999999999999999999999998888999999999 5999999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 158 SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
|.|||- ++|++++.+|++++..++|.+++..|..+|..-+ .+....+...........+++.+||..+++.+|+..
T Consensus 199 N~Vvp~-~~LE~e~v~W~~E~l~kSP~AlR~LK~Afnad~D-GlaG~q~~ag~at~L~YmTdEa~EGr~AF~eKR~Pd 274 (282)
T COG0447 199 NTVVPH-ADLEKETVQWAREMLAKSPTALRMLKAAFNADCD-GLAGLQELAGNATLLYYMTDEAQEGRDAFLEKRKPD 274 (282)
T ss_pred eeeccH-HHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCc-hhhHHHHhcccceEEEEechhhhhhHHHHhhccCCC
Confidence 999997 9999999999999999999999999999987655 444444444444455568899999999999987654
|
|
| >PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-33 Score=264.78 Aligned_cols=173 Identities=22% Similarity=0.322 Sum_probs=144.6
Q ss_pred CHHHHHHHhh-hCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhhcCCCcE
Q psy14406 1 EIGECFDSLS-ENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT-TYQKSISSLERCPKPV 77 (275)
Q Consensus 1 el~~~l~~~~-~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~kP~ 77 (275)
||.++|++++ +|++|++|||+|.+ ++||+|+|++.+..... .. . .....+.+ ....+...+.++||||
T Consensus 56 eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~~~~~~~~------~~-~--~~~~~~~~~~~~~l~~~l~~~pkPv 126 (550)
T PRK08184 56 ELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIFMLGGSSH------AW-K--VNFCKFTNETRNGIEDSSRHSGLKF 126 (550)
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHHhHhcccc------ch-h--hhHHHHHHHHHHHHHHHHHhCCCCE
Confidence 5788999998 78999999999985 99999999998743111 00 0 00011111 1122445677899999
Q ss_pred EEEECchhchHHHHHHHHCCEEEEeCC--ceEeccccc-cCcccCchhhhhhh--HHhCcHHHHHHHHhcCCCCCHHHHH
Q psy14406 78 ISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVD-IGLTADVGALQRLP--RIIGNQSLVNEIAFTARKIEAAEAR 152 (275)
Q Consensus 78 Ia~v~G~a~GgG~~lal~~D~rva~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r~~G~~~~a~~l~ltG~~~~a~eA~ 152 (275)
||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|++|++++++ +++|+ .++++|++||++++++||+
T Consensus 127 IAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg~-~~A~~llltG~~i~AeeA~ 205 (550)
T PRK08184 127 IAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRR-DLADIFCTIEEGVRGKRAV 205 (550)
T ss_pred EEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcCH-HHHHHHHHhCCcccHHHHH
Confidence 999999999999999999999999987 899999997 99999999999998 77995 8999999999999999999
Q ss_pred HcCCcccccCChhHHHHHHHHHHHHHhcCCHH
Q psy14406 153 ECGLVSKLYDDKESLLAGAIELGELIASKSPV 184 (275)
Q Consensus 153 ~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~ 184 (275)
++||||++||+ +++.+++.+++++|+..+|.
T Consensus 206 ~~GLVd~vv~~-d~l~~~a~~~A~~ia~~~~~ 236 (550)
T PRK08184 206 DWRLVDEVVKP-SKFDAKVAERAAELAAASDR 236 (550)
T ss_pred HcCCccEeeCH-HHHHHHHHHHHHHHHhCCCC
Confidence 99999999997 89999999999999988753
|
|
| >KOG1682|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=220.25 Aligned_cols=217 Identities=22% Similarity=0.307 Sum_probs=190.8
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
|...|....++.++|+|||+..|+.||+|.||+++..-.. . ..-.+.+....+++..|.++|.|+|+-|
T Consensus 64 Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e~g-----~------d~haevFqtc~dvmn~Irn~pVPVia~V 132 (287)
T KOG1682|consen 64 LQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNEPG-----S------DIHAEVFQTCTDVMNDIRNLPVPVIAKV 132 (287)
T ss_pred HHHHHhhcccccceeEEEEecCCccccccccHHHhhcCcc-----c------hHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 4455566666789999999999999999999999964221 1 1234567778889999999999999999
Q ss_pred CchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccccc
Q psy14406 82 HGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLY 161 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv 161 (275)
||++..+|+.|...||++|++++++|..|.+++|+|...-+. -|.|.+. +..+.+|++||.+++++||+..|||+++|
T Consensus 133 NG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavp-Rkva~~ML~Tg~Pi~~eeAl~sGlvskvV 210 (287)
T KOG1682|consen 133 NGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVP-RKVAAYMLMTGLPITGEEALISGLVSKVV 210 (287)
T ss_pred cchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcc-hhHHHHHHHhCCCCchHHHHHhhhhhhcC
Confidence 999999999999999999999999999999999998876554 4888888 58999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 162 DDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 162 ~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
|. ++++.++++++..|...++..+..-|.........+..+++.......-..+.-.|.+||+..+..+|
T Consensus 211 p~-~el~~e~~~i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~ql~d~kegiasf~~kr 280 (287)
T KOG1682|consen 211 PA-EELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQLGDTKEGIASFFEKR 280 (287)
T ss_pred CH-HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccchHHHHHHHhccC
Confidence 98 99999999999999999999999999998888877888888877777777888899999999998876
|
|
| >cd07014 S49_SppA Signal peptide peptidase A | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-21 Score=159.13 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=112.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++++|++|++|||++ ||.|+|+.... .+++++..+.+++||+||+
T Consensus 26 ~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~------------------------~~~~~i~~~~~~~kpVia~ 77 (177)
T cd07014 26 TTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE------------------------VIRAELAAARAAGKPVVAS 77 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH------------------------HHHHHHHHHHhCCCCEEEE
Confidence 4778999999999999999997 68998875421 1234566677889999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhh--------hhhHHhCc-HHHHHHHHhcCCCCCHHHH
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQ--------RLPRIIGN-QSLVNEIAFTARKIEAAEA 151 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~--------~l~r~~G~-~~~a~~l~ltG~~~~a~eA 151 (275)
|||.|.|+|+.|+++||+++++++++|+.+.+..+..+...... .+++..|. ....++++..|..+++++|
T Consensus 78 v~G~a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A 157 (177)
T cd07014 78 GGGNAASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDA 157 (177)
T ss_pred ECCchhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHH
Confidence 99999999999999999999999999999988776443322222 44455551 2567888999999999999
Q ss_pred HHcCCcccccCChhHHHH
Q psy14406 152 RECGLVSKLYDDKESLLA 169 (275)
Q Consensus 152 ~~~GLv~~vv~~~~~l~~ 169 (275)
++.||||++.+. +++.+
T Consensus 158 ~~~GLVD~v~~~-~e~~~ 174 (177)
T cd07014 158 KANGLVDSLGSF-DDAVA 174 (177)
T ss_pred HHcCCcccCCCH-HHHHH
Confidence 999999999986 66654
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p |
| >cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=151.72 Aligned_cols=137 Identities=17% Similarity=0.198 Sum_probs=107.3
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.+.|+.+.+|+ ++.|+|.=. |.|+++..- ..++..|..+|||||++|
T Consensus 18 l~~~l~~a~~~~-~~~vvl~In----SpGG~v~~~---------------------------~~i~~~l~~~~kPvia~v 65 (187)
T cd07020 18 LERAIDQAEEGG-ADALIIELD----TPGGLLDST---------------------------REIVQAILASPVPVVVYV 65 (187)
T ss_pred HHHHHHHHHhCC-CCEEEEEEE----CCCCCHHHH---------------------------HHHHHHHHhCCCCEEEEE
Confidence 567788887655 788888722 556665432 123445667899999999
Q ss_pred C---chhchHHHHHHHHCCEEEEeCCceEeccccccCcccCc--------------hhhhhhhHHhCcH-HHHHHHHhcC
Q psy14406 82 H---GACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV--------------GALQRLPRIIGNQ-SLVNEIAFTA 143 (275)
Q Consensus 82 ~---G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~--------------g~~~~l~r~~G~~-~~a~~l~ltG 143 (275)
+ |+|+|||+.|+++||++|++++++|+++++..+..+.. +....+++..|.. ..+++++++|
T Consensus 66 ~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~a~~~l~~g 145 (187)
T cd07020 66 YPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGRNAEWAEKAVRES 145 (187)
T ss_pred ecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcC
Confidence 9 99999999999999999999999999999985544432 2355788888841 4788999999
Q ss_pred CCCCHHHHHHcCCcccccCChhHHHHH
Q psy14406 144 RKIEAAEARECGLVSKLYDDKESLLAG 170 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~vv~~~~~l~~~ 170 (275)
+.++++||+++||||+++++.+++...
T Consensus 146 ~~~~a~eA~~~Glvd~v~~~~~~~~~~ 172 (187)
T cd07020 146 LSLTAEEALKLGVIDLIAADLNELLKK 172 (187)
T ss_pred CeecHHHHHHcCCcccccCCHHHHHHH
Confidence 999999999999999999983356544
|
Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c |
| >cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-16 Score=136.65 Aligned_cols=81 Identities=16% Similarity=0.226 Sum_probs=69.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++..||+|++|||+ .||+|+|+..+. .+++.+..+..++||+||.
T Consensus 25 ~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~------------------------~~~~~l~~~~~~~kpVia~ 76 (211)
T cd07019 25 TTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASE------------------------VIRAELAAARAAGKPVVVS 76 (211)
T ss_pred HHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHH------------------------HHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999998 699999996642 1123456677789999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEec
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTL 109 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~ 109 (275)
++|.|.|+|+.|+++||++++++++.|+.
T Consensus 77 v~g~a~s~gy~la~~aD~i~a~~~a~~gs 105 (211)
T cd07019 77 AGGAAASGGYWISTPANYIVANPSTLTGS 105 (211)
T ss_pred ECCeehhHHHHHHHhCCEEEEcCCCEEEE
Confidence 99999999999999999999999998873
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te |
| >TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-14 Score=141.63 Aligned_cols=153 Identities=17% Similarity=0.218 Sum_probs=115.8
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.+.|+.+..|++|++|||+-. |.|++.... ..+++.+..+...+||||+.+
T Consensus 334 ~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as------------------------e~i~~~i~~~~~~gKPVva~~ 385 (584)
T TIGR00705 334 VAALLRVARSDPDIKAVVLRIN----SPGGSVFAS------------------------EIIRRELARAQARGKPVIVSM 385 (584)
T ss_pred HHHHHHHHhhCCCceEEEEEec----CCCCCHHHH------------------------HHHHHHHHHHHhCCCcEEEEE
Confidence 5678899999999999999964 333332111 011223445566689999999
Q ss_pred CchhchHHHHHHHHCCEEEEeCCceE------eccc------cccCcccCchhhhhhhH---------------------
Q psy14406 82 HGACIGGGMSLITAADIRYATKDAWF------TLKE------VDIGLTADVGALQRLPR--------------------- 128 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~rva~~~a~f------~~pe------~~~G~~p~~g~~~~l~r--------------------- 128 (275)
+|.|.+||+.++++||.+++++++.+ +++. .++|+.|+...+..+..
T Consensus 386 ~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~~~~~t~~~~~~~~~~l~~ 465 (584)
T TIGR00705 386 GAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSLLRPLTAEDQAIMQLSVEA 465 (584)
T ss_pred CCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999977 6663 57999988776665543
Q ss_pred -------HhCcHHH-----HHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcC-CHHHHHH
Q psy14406 129 -------IIGNQSL-----VNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK-SPVAVQG 188 (275)
Q Consensus 129 -------~~G~~~~-----a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~-~~~a~~~ 188 (275)
.++. .+ ..+.+.+|+.++++||+++||||++.. + +++.+.|.+++.. ++..+..
T Consensus 466 ~y~~F~~~Va~-~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig~----~-~~Ai~~a~~la~~~~~~~v~~ 532 (584)
T TIGR00705 466 GYRRFLSVVSA-GRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALGG----L-DEAVAKAAKLAHCREQWSVEV 532 (584)
T ss_pred HHHHHHHHHHh-hCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCCC----H-HHHHHHHHHHcCCCCCceEEE
Confidence 5552 44 677889999999999999999999943 3 6777888888887 5544443
|
E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. |
| >cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.5e-14 Score=115.70 Aligned_cols=129 Identities=22% Similarity=0.249 Sum_probs=96.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+.|+.++.|++++.|+|+. .|.|+|+... ..+...+..++||+|+.
T Consensus 15 ~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~---------------------------~~i~~~l~~~~kpvva~ 63 (161)
T cd00394 15 QLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAG---------------------------MNIVDALQASRKPVIAY 63 (161)
T ss_pred HHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHH---------------------------HHHHHHHHHhCCCEEEE
Confidence 3678899999999999999987 4778776432 12234455668999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCch--h-----------hhhhhHHh----Cc-HHHHHHHHhc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG--A-----------LQRLPRII----GN-QSLVNEIAFT 142 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g--~-----------~~~l~r~~----G~-~~~a~~l~lt 142 (275)
++|.|.++|+.|+++||.|++.+++.|++..+..+.....+ . ...+...+ |. .....+++..
T Consensus 64 ~~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~ 143 (161)
T cd00394 64 VGGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEK 143 (161)
T ss_pred ECChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcC
Confidence 99999999999999999999999999999888765543220 0 01111111 10 1234667778
Q ss_pred CCCCCHHHHHHcCCcccc
Q psy14406 143 ARKIEAAEARECGLVSKL 160 (275)
Q Consensus 143 G~~~~a~eA~~~GLv~~v 160 (275)
+..++++||++.||||++
T Consensus 144 ~~~~~a~eA~~~GLvD~i 161 (161)
T cd00394 144 DLVLTAQEALEYGLVDAL 161 (161)
T ss_pred CcEEcHHHHHHcCCcCcC
Confidence 999999999999999985
|
Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec |
| >cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.1e-14 Score=114.97 Aligned_cols=95 Identities=15% Similarity=0.184 Sum_probs=77.0
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchh---------------hhhhhHHh
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA---------------LQRLPRII 130 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~~ 130 (275)
++..|..+|||+|+.++|.|.|+|+.|+++||+|+++++++|.++....+..+.... ...+.+..
T Consensus 50 i~~~i~~~~~pvi~~v~g~a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~ 129 (160)
T cd07016 50 IYNALKRHKGKVTVKIDGLAASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKT 129 (160)
T ss_pred HHHHHHhcCCCEEEEEcchHHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355566779999999999999999999999999999999999998877666554321 23377778
Q ss_pred CcH-HHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 131 GNQ-SLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 131 G~~-~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|.. ....+++.++..++++||+++||||++
T Consensus 130 g~~~~~i~~~~~~~~~l~a~eA~~~GliD~v 160 (160)
T cd07016 130 GLSEEEISALMDAETWLTAQEAVELGFADEI 160 (160)
T ss_pred CCCHHHHHHHHhCCeECcHHHHHHcCCCCcC
Confidence 842 566667777778999999999999985
|
Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a |
| >cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.8e-13 Score=116.29 Aligned_cols=83 Identities=20% Similarity=0.264 Sum_probs=64.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.+++|++|++|||+. +|.|+++... ..+.+.+..+.. +|||||.
T Consensus 29 ~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~------------------------~~l~~~l~~~~~-~KpViA~ 79 (214)
T cd07022 29 GIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV------------------------FELADAIRAARA-GKPIVAF 79 (214)
T ss_pred HHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH------------------------HHHHHHHHHHhc-CCCEEEE
Confidence 4678999999999999999985 5667665322 112223344444 6999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEecccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEV 112 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~ 112 (275)
++|.|.|+|+.|+++||++++++++.|+...+
T Consensus 80 v~g~a~s~gy~lA~~aD~i~a~~~a~~g~iG~ 111 (214)
T cd07022 80 VNGLAASAAYWIASAADRIVVTPTAGVGSIGV 111 (214)
T ss_pred ECCchhhHHHHHHhcCCEEEEcCCCeEEeeeE
Confidence 99999999999999999999999999865543
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. |
| >cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.5e-13 Score=116.04 Aligned_cols=135 Identities=19% Similarity=0.227 Sum_probs=95.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.++.|+++++|||++ +|.|+|+.... .+++.+..+..++||+||+
T Consensus 21 ~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~------------------------~i~~~i~~~~~~~kpvia~ 72 (208)
T cd07023 21 SLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASE------------------------EIYREIRRLRKAKKPVVAS 72 (208)
T ss_pred HHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHH------------------------HHHHHHHHHHhcCCcEEEE
Confidence 4678999999999999999998 48898885421 1233456677789999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEecccc------------ccCcccCchhh------------------hhhhHHh
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEV------------DIGLTADVGAL------------------QRLPRII 130 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~------------~~G~~p~~g~~------------------~~l~r~~ 130 (275)
++|.|.|+|+.|+++||++++++++.|+...+ ++|+-+..-.+ ..+..++
T Consensus 73 v~g~~~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l 152 (208)
T cd07023 73 MGDVAASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEERAILQALV 152 (208)
T ss_pred ECCcchhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999998864322 23333322110 0000111
Q ss_pred Cc------------H---HHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 131 GN------------Q---SLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 131 G~------------~---~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.. + .....-++.|..+++++|++.||||.+...
T Consensus 153 ~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~a~~A~~~gLiD~i~~~ 200 (208)
T cd07023 153 DDIYDQFVDVVAEGRGMSGERLDKLADGRVWTGRQALELGLVDELGGL 200 (208)
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHhcCCcEEEHHHHHHcCCCcccCCH
Confidence 10 0 011233567889999999999999999764
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad |
| >TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=111.87 Aligned_cols=138 Identities=19% Similarity=0.231 Sum_probs=94.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CcEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCP--KPVI 78 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--kP~I 78 (275)
+|.++|+.+.+|+++++|||+.. |.|+++.... ++...|..++ ||+|
T Consensus 17 ~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~~---------------------------~l~~~i~~~~~~kpvi 65 (207)
T TIGR00706 17 DFDKKIKRIKDDKSIKALLLRIN----SPGGTVVASE---------------------------EIYEKLKKLKAKKPVV 65 (207)
T ss_pred HHHHHHHHHhhCCCccEEEEEec----CCCCCHHHHH---------------------------HHHHHHHHhcCCCCEE
Confidence 46788999999999999999984 7887775331 1223334444 9999
Q ss_pred EEECchhchHHHHHHHHCCEEEEeCCceEeccccc------------cCcccCc---------hhh---------hhhh-
Q psy14406 79 SAVHGACIGGGMSLITAADIRYATKDAWFTLKEVD------------IGLTADV---------GAL---------QRLP- 127 (275)
Q Consensus 79 a~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~------------~G~~p~~---------g~~---------~~l~- 127 (275)
|.++|.|.|+|+.|+++||.+++++++.|+...+. +|+-+.. +.. ..+.
T Consensus 66 a~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~ 145 (207)
T TIGR00706 66 ASMGGVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQN 145 (207)
T ss_pred EEECCccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999987654332 2332110 000 0010
Q ss_pred ----------------HHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHH
Q psy14406 128 ----------------RIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172 (275)
Q Consensus 128 ----------------r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~ 172 (275)
|-+.. .. .+-++.|+.+++++|++.||||++... +++.+...
T Consensus 146 ~l~~~~~~f~~~va~~R~~~~-~~-~~~~~~~~~~~~~~A~~~gLvD~i~~~-~~~~~~~~ 203 (207)
T TIGR00706 146 LVNESYEQFVQVVAKGRNLPV-ED-VKKFADGRVFTGRQALKLRLVDKLGTE-DDALKWLA 203 (207)
T ss_pred HHHHHHHHHHHHHHhcCCCCH-HH-HHHHhcCCcccHHHHHHcCCCcccCCH-HHHHHHHH
Confidence 11110 11 123467899999999999999999865 55554443
|
The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively. |
| >cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-12 Score=111.67 Aligned_cols=138 Identities=22% Similarity=0.253 Sum_probs=96.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+.|+++.+||+|++|||+..+..| ++.++.++ ++.+..+...+|||||.
T Consensus 33 ~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el---------------------------~~~i~~~~~~~kpVia~ 84 (222)
T cd07018 33 DLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEEL---------------------------RQALERFRASGKPVIAY 84 (222)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHH---------------------------HHHHHHHHHhCCeEEEE
Confidence 467899999999999999999988766 55555443 22344455569999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccc------------cCcccC---------chhhhh-----------hhH
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVD------------IGLTAD---------VGALQR-----------LPR 128 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~------------~G~~p~---------~g~~~~-----------l~r 128 (275)
++| +.+||+.|+++||.+++.+.+.|+...+. +|+-+. .+..+. +..
T Consensus 85 ~~~-~~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~ 163 (222)
T cd07018 85 ADG-YSQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQA 163 (222)
T ss_pred eCC-CCchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHH
Confidence 998 88999999999999999999999885432 232221 111110 000
Q ss_pred H-----------------hCcHHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHH
Q psy14406 129 I-----------------IGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAG 170 (275)
Q Consensus 129 ~-----------------~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~ 170 (275)
. +. ... .+-+..|+.+++++|++.||||++... +++.+.
T Consensus 164 ~l~~~~~~f~~~Va~~R~~~-~~~-~~~~~~~~~~~~~~A~~~GLvD~i~~~-~e~~~~ 219 (222)
T cd07018 164 LLDSLWDQYLADVAASRGLS-PDA-LEALIDLGGDSAEEALEAGLVDGLAYR-DELEAR 219 (222)
T ss_pred HHHHHHHHHHHHHHHHcCCC-HHH-HHHHHHcCCcHHHHHHHCCCCCcCCcH-HHHHHH
Confidence 0 11 011 223445999999999999999999865 655543
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys |
| >cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-11 Score=102.67 Aligned_cols=135 Identities=17% Similarity=0.195 Sum_probs=91.6
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
|.+.|+++.+++ +..|||.=. |.|+++... ..++..|..+|+|+|+.|
T Consensus 18 l~~~l~~a~~~~-~~~ivl~in----spGG~v~~~---------------------------~~I~~~l~~~~~pvva~V 65 (178)
T cd07021 18 VERALKEAKEEG-ADAVVLDID----TPGGRVDSA---------------------------LEIVDLILNSPIPTIAYV 65 (178)
T ss_pred HHHHHHHHHhCC-CCeEEEEEE----CcCCCHHHH---------------------------HHHHHHHHhCCCCEEEEE
Confidence 567788888876 677777643 445555332 234566777899999999
Q ss_pred CchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCch----hhhh------hhHHhCc-HHHHHHHHhcC-------
Q psy14406 82 HGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG----ALQR------LPRIIGN-QSLVNEIAFTA------- 143 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g----~~~~------l~r~~G~-~~~a~~l~ltG------- 143 (275)
+|.|.++|+.|+++||++++++++.|+.+++-.+...+.- .... +...-|. ...+..|+-..
T Consensus 66 ~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~~~v~~~~ 145 (178)
T cd07021 66 NDRAASAGALIALAADEIYMAPGATIGAAEPIPGDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKDIEVPGVG 145 (178)
T ss_pred CCchHHHHHHHHHhCCeEEECCCCeEecCeeEcCCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhhccccccc
Confidence 9999999999999999999999999998865422111000 0111 2222332 12334444333
Q ss_pred ------CCCCHHHHHHcCCcccccCChhHHH
Q psy14406 144 ------RKIEAAEARECGLVSKLYDDKESLL 168 (275)
Q Consensus 144 ------~~~~a~eA~~~GLv~~vv~~~~~l~ 168 (275)
-.++++||++.|++|.+.++.++|.
T Consensus 146 ~~~~~~l~lta~eA~~~g~~d~ia~~~~~ll 176 (178)
T cd07021 146 IKGGELLTLTADEALKVGYAEGIAGSLDELL 176 (178)
T ss_pred ccccceeeeCHHHHHHhCCeEEEECCHHHHh
Confidence 2699999999999999998755553
|
Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall |
| >cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.7e-08 Score=83.42 Aligned_cols=135 Identities=14% Similarity=0.178 Sum_probs=94.2
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
|.+.++.+.+| +++.|+|.=. |.|+++... ..++..|...++||++.|
T Consensus 18 l~~~l~~A~~~-~~~~i~l~in----SPGG~v~~~---------------------------~~I~~~i~~~~~pvv~~v 65 (172)
T cd07015 18 FDRYITIAEQD-NAEAIIIELD----TPGGRADAA---------------------------GNIVQRIQQSKIPVIIYV 65 (172)
T ss_pred HHHHHHHHhcC-CCCeEEEEEE----CCCCCHHHH---------------------------HHHHHHHHhcCcCEEEEE
Confidence 45677777654 5788888643 556655432 122444556799999999
Q ss_pred C---chhchHHHHHHHHCCEEEEeCCceEeccccccCcccC----c-h--h-hhh------hhHHhCc-HHHHHHHHhcC
Q psy14406 82 H---GACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD----V-G--A-LQR------LPRIIGN-QSLVNEIAFTA 143 (275)
Q Consensus 82 ~---G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~----~-g--~-~~~------l~r~~G~-~~~a~~l~ltG 143 (275)
+ |.|..+|..++++||.+++.+++.++...+-.|..+. . . . ... +.+.-|. ...+..++-..
T Consensus 66 ~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~~ 145 (172)
T cd07015 66 YPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITKD 145 (172)
T ss_pred ecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhh
Confidence 9 9999999999999999999999999988875433220 0 0 0 111 2222331 13455666777
Q ss_pred CCCCHHHHHHcCCcccccCChhHHH
Q psy14406 144 RKIEAAEARECGLVSKLYDDKESLL 168 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~vv~~~~~l~ 168 (275)
..++++||++.|++|.++.+.++|.
T Consensus 146 ~~lta~EA~~~G~iD~ia~~~~~ll 170 (172)
T cd07015 146 LSLTPEEALKYGVIEVVARDINELL 170 (172)
T ss_pred cCcCHHHHHHcCCceeeeCCHHHHh
Confidence 8899999999999999998865554
|
Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle |
| >PRK10949 protease 4; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.1e-08 Score=96.94 Aligned_cols=145 Identities=16% Similarity=0.184 Sum_probs=93.7
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.+.|+++.+|++||+|||+-. |.|+..... +.+++.+.++....||+|+.+
T Consensus 352 ~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~as------------------------e~i~~~i~~~r~~gKPVvas~ 403 (618)
T PRK10949 352 TAAQIRDARLDPKVKAIVLRVN----SPGGSVTAS------------------------EVIRAELAAARAAGKPVVVSM 403 (618)
T ss_pred HHHHHHHHHhCCCCcEEEEEec----CCCCcHHHH------------------------HHHHHHHHHHHhcCCcEEEEE
Confidence 5678999999999999999965 334333111 112233444556689999999
Q ss_pred CchhchHHHHHHHHCCEEEEeCCceEecccc------------ccCcccCchhhhhh-----------------hHH---
Q psy14406 82 HGACIGGGMSLITAADIRYATKDAWFTLKEV------------DIGLTADVGALQRL-----------------PRI--- 129 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~rva~~~a~f~~pe~------------~~G~~p~~g~~~~l-----------------~r~--- 129 (275)
.+.|..||+.++++||.+++.+.+..+...+ ++|+-++...+..+ ...
T Consensus 404 ~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~~~~~~s~e~~~~~q~~ld~ 483 (618)
T PRK10949 404 GGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVSITKALPPEFQQMMQLSIEN 483 (618)
T ss_pred CCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCccccCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999876554332 23333221111000 000
Q ss_pred --------------hCcHHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcC
Q psy14406 130 --------------IGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181 (275)
Q Consensus 130 --------------~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~ 181 (275)
+. ... .+-+..|+.+++.+|++.||||++-.- ++. .+.+++++..
T Consensus 484 ~y~~F~~~Va~~R~~~-~~~-v~~ia~Grv~tg~~A~~~GLVD~lG~~-~~a----i~~a~~~a~~ 542 (618)
T PRK10949 484 GYKRFITLVADSRHKT-PEQ-IDKIAQGHVWTGQDAKANGLVDSLGDF-DDA----VAKAAELAKL 542 (618)
T ss_pred HHHHHHHHHHhhCCCC-HHH-HHHHhcCCcccHHHHHHcCCCccCCCH-HHH----HHHHHHHcCC
Confidence 11 011 223568999999999999999999754 433 3444445544
|
|
| >cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-07 Score=78.05 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=81.1
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+...|..++.++.++.|+|.=. |.|+++..- ..++..|..+++|+++.+
T Consensus 17 ~~~~L~~l~~~~~~~~i~l~In----SpGG~v~~~---------------------------~~i~~~i~~~~~~v~~~~ 65 (162)
T cd07013 17 FAAQLLFLGAVNPEKDIYLYIN----SPGGDVFAG---------------------------MAIYDTIKFIKADVVTII 65 (162)
T ss_pred HHHHHHHHhcCCCCCCEEEEEE----CCCCcHHHH---------------------------HHHHHHHHhcCCCceEEE
Confidence 5667888888877777777643 455554321 123445556689999999
Q ss_pred CchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchhhh---------------hhhHHhCc-HHHHHHHHhcC
Q psy14406 82 HGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGALQ---------------RLPRIIGN-QSLVNEIAFTA 143 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~G~-~~~a~~l~ltG 143 (275)
.|.|.++|.-|+++|| .|++.++++|.+....-+......-.. .+.+..|. .....+++-.+
T Consensus 66 ~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~ 145 (162)
T cd07013 66 DGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERD 145 (162)
T ss_pred EeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCC
Confidence 9999999999999999 688888888765433222111100000 11222221 12223445455
Q ss_pred CCCCHHHHHHcCCcccc
Q psy14406 144 RKIEAAEARECGLVSKL 160 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~v 160 (275)
.-++++||+++||||++
T Consensus 146 ~~~sa~eA~~~GliD~i 162 (162)
T cd07013 146 TWLSAREAVEYGFADTI 162 (162)
T ss_pred ccccHHHHHHcCCCCcC
Confidence 55699999999999985
|
Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas |
| >COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.2e-07 Score=83.23 Aligned_cols=129 Identities=21% Similarity=0.228 Sum_probs=90.3
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.+.|+.+..|++++.|||+=. |.|+.+..- ..+++.++++..-. |+++.|
T Consensus 85 ~~~~l~~~~~~~~vk~vvL~in----SPGG~v~as------------------------~~i~~~l~~l~~~~-PV~v~v 135 (317)
T COG0616 85 IEEILRAARADPSVKAVVLRIN----SPGGSVVAS------------------------ELIARALKRLRAKK-PVVVSV 135 (317)
T ss_pred HHHHHHHHhcCCCCceEEEEEE----CcCCchhHH------------------------HHHHHHHHHHhhcC-CEEEEE
Confidence 4578899999999999999854 455544321 11233344444433 999999
Q ss_pred CchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCc-----------------------------
Q psy14406 82 HGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGN----------------------------- 132 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~----------------------------- 132 (275)
+++|+.||..++++||.+||+++|..|--.+..+. |+. ..+-...|.
T Consensus 136 ~~~AASGGY~IA~aAd~I~a~p~si~GSIGVi~~~-~~~---~~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q 211 (317)
T COG0616 136 GGYAASGGYYIALAADKIVADPSSITGSIGVISGA-PNF---EELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQ 211 (317)
T ss_pred CCeecchhhhhhccCCEEEecCCceeeeceeEEec-CCH---HHHHHhcCCceeeeeccccccccCcccCCCHHHHHHHH
Confidence 99999999999999999999999998866555542 222 122222221
Q ss_pred --------------------HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 133 --------------------QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 133 --------------------~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
......-+.+|+.+++.+|++.||||++...
T Consensus 212 ~~~~e~y~~F~~~V~~~R~~~~~~~~~~a~g~v~~g~~A~~~gLVDelg~~ 262 (317)
T COG0616 212 KEIDETYDEFVDKVAEGRGLSDEAVDKLATGRVWTGQQALELGLVDELGGL 262 (317)
T ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHhccceecHHHhhhcCCchhcCCH
Confidence 0001235678999999999999999999865
|
|
| >PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.7e-06 Score=74.69 Aligned_cols=93 Identities=19% Similarity=0.259 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHH
Q psy14406 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEI 139 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l 139 (275)
...+.+++..+...+.|+|+.|-|.|.|||......||++++.+++.|+. .++-|....+-+--.....+.+.
T Consensus 122 ~~~ia~~~~~~s~~~VP~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v-------~~pe~~a~il~~~~~~a~~aa~~ 194 (256)
T PRK12319 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAV-------LSPEGFASILWKDGSRATEAAEL 194 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCcCcHHHHHhhcCCEEEEecCceEEE-------cCHHHHHHHHhcCcccHHHHHHH
Confidence 34556667788888999999999999999998888999999999988763 33333433333221111222333
Q ss_pred HhcCCCCCHHHHHHcCCcccccCC
Q psy14406 140 AFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 140 ~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
+ .+++.++++.|+||+|++.
T Consensus 195 ~----~~~a~~l~~~g~iD~ii~e 214 (256)
T PRK12319 195 M----KITAGELLEMGVVDKVIPE 214 (256)
T ss_pred c----CCCHHHHHHCCCCcEecCC
Confidence 3 7799999999999999974
|
|
| >PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-06 Score=74.47 Aligned_cols=97 Identities=16% Similarity=0.209 Sum_probs=61.2
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchh---------------hhhhhHH
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGA---------------LQRLPRI 129 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~ 129 (275)
+..|...+.|+++.+.|.|.+.|..|+++++ .|++.++++|.+-...-|......- ...+...
T Consensus 82 ~d~i~~~~~~v~t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~ 161 (200)
T PRK00277 82 YDTMQFIKPDVSTICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEH 161 (200)
T ss_pred HHHHHhcCCCEEEEEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566789999999999999999998753 5666666666554332111100000 0112333
Q ss_pred hCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 130 IGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 130 ~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.|. ......++-.+.-++|+||++.||||+|+.+
T Consensus 162 tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 162 TGQPLEKIEKDTDRDNFMSAEEAKEYGLIDEVLTK 196 (200)
T ss_pred HCcCHHHHHHHhhCCccccHHHHHHcCCccEEeec
Confidence 331 1233444555677999999999999999975
|
|
| >PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.3e-06 Score=74.65 Aligned_cols=99 Identities=19% Similarity=0.270 Sum_probs=70.4
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEecccccc-CcccCchh------------------hhh
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDI-GLTADVGA------------------LQR 125 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~-G~~p~~g~------------------~~~ 125 (275)
+..|..++.|+++.+.|.|.+.|.-|+++|| .|++.+++.|.+-.... |. ..|. ...
T Consensus 86 ~d~i~~~~~~v~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ 163 (207)
T PRK12553 86 YDTIQFIRPDVQTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERI 163 (207)
T ss_pred HHHHHhcCCCcEEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666889999999999999999999999 59999999988776542 21 1111 112
Q ss_pred hhHHhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHH
Q psy14406 126 LPRIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDDKESL 167 (275)
Q Consensus 126 l~r~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l 167 (275)
+....|. .....+++-.+.-++|+||++.||||+|+.+.++|
T Consensus 164 ya~~tg~~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~~~dl 206 (207)
T PRK12553 164 LAEHTGQSVEKIRKDTDRDKWLTAEEAKDYGLVDQIITSYRDL 206 (207)
T ss_pred HHHHhCCCHHHHHHHHhcCccccHHHHHHcCCccEEcCchhhc
Confidence 3333332 12334455677889999999999999999874443
|
|
| >cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=71.79 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=83.8
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+...|..+..++..+.|+|.=. |.|+|+..- ..++..|...+.|+++.+
T Consensus 26 i~~~l~~~~~~~~~~~i~l~in----SpGG~v~~~---------------------------~~i~~~l~~~~~~v~t~~ 74 (171)
T cd07017 26 IIAQLLYLESEDPKKPIYLYIN----SPGGSVTAG---------------------------LAIYDTMQYIKPPVSTIC 74 (171)
T ss_pred HHHHHHHHHccCCCCceEEEEE----CCCCCHHHH---------------------------HHHHHHHHhcCCCEEEEE
Confidence 4566777777665555555422 445554321 122334455689999999
Q ss_pred CchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchh---------------hhhhhHHhCc-HHHHHHHHhcC
Q psy14406 82 HGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGA---------------LQRLPRIIGN-QSLVNEIAFTA 143 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~~G~-~~~a~~l~ltG 143 (275)
.|.|.++|.-+++++| .|++.++++|.+-+...+..-...- ...+....|. ......++-.+
T Consensus 75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~ 154 (171)
T cd07017 75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRD 154 (171)
T ss_pred EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCC
Confidence 9999999999999999 7999999998887765544322100 0111222232 12334455577
Q ss_pred CCCCHHHHHHcCCcccc
Q psy14406 144 RKIEAAEARECGLVSKL 160 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~v 160 (275)
.-++++||+++||||+|
T Consensus 155 ~~lta~EA~e~GiiD~V 171 (171)
T cd07017 155 RYMSAEEAKEYGLIDKI 171 (171)
T ss_pred ccccHHHHHHcCCCccC
Confidence 78999999999999986
|
Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ |
| >PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.9e-06 Score=69.18 Aligned_cols=103 Identities=15% Similarity=0.163 Sum_probs=68.6
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchhh---------------hhhhH
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGAL---------------QRLPR 128 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r 128 (275)
++..|..++.||++.+.|.|.+.|.-|+++||- |++.++++|-+-...-+......-. ..+..
T Consensus 73 I~d~i~~~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~ 152 (197)
T PRK14512 73 IFNMIRFVKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAK 152 (197)
T ss_pred HHHHHHhCCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566678999999999999999999999985 9999999876554432221111100 01122
Q ss_pred HhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHH
Q psy14406 129 IIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLL 168 (275)
Q Consensus 129 ~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~ 168 (275)
..|. ......++-...-++++||+++||||+|+++.+++.
T Consensus 153 ~tg~~~~~i~~~~~~d~~lta~EA~~yGliD~I~~~~~~l~ 193 (197)
T PRK14512 153 ETGQELDKVEKDTDRDFWLDSSSAVKYGLVFEVVETRLELE 193 (197)
T ss_pred HhCcCHHHHHHhhhcCcccCHHHHHHcCCccEeecCcHHhH
Confidence 2221 122334444556799999999999999998755554
|
|
| >CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=9.3e-06 Score=73.10 Aligned_cols=93 Identities=16% Similarity=0.153 Sum_probs=68.7
Q ss_pred HHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHH
Q psy14406 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEI 139 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l 139 (275)
...+.+.+..+.....|+|+.|-|.+.|||......||++++.++++|+ +.++-|....|-+- ..++.+
T Consensus 178 ~~aiar~l~~~a~~~VP~IsVViGeggsGGAlal~~aD~V~m~e~a~~s-------VisPEg~a~Il~~d---~~~a~~- 246 (322)
T CHL00198 178 GEAIAVNLREMFSFEVPIICTIIGEGGSGGALGIGIGDSIMMLEYAVYT-------VATPEACAAILWKD---SKKSLD- 246 (322)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCcccHHHHHhhhcCCeEEEeCCeEEE-------ecCHHHHHHHHhcc---hhhHHH-
Confidence 3445556667788899999999999988887666679999999999877 44444444444333 233333
Q ss_pred HhcCCCCCHHHHHHcCCcccccCC
Q psy14406 140 AFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 140 ~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
+-..-++|+.+.++.|+||+|+|.
T Consensus 247 aA~~~~ita~dL~~~giiD~ii~E 270 (322)
T CHL00198 247 AAEALKITSEDLKVLGIIDEIIPE 270 (322)
T ss_pred HHHHcCCCHHHHHhCCCCeEeccC
Confidence 335578999999999999999974
|
|
| >PRK11778 putative inner membrane peptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.6e-06 Score=74.60 Aligned_cols=103 Identities=19% Similarity=0.184 Sum_probs=69.1
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhh-----------------------
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGAL----------------------- 123 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~----------------------- 123 (275)
+.++....||+|+.+++.|..||+.++++||.+++.+.+.++...+-.. .|.....
T Consensus 147 l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~-~~~~~~lLeKlGI~~evi~aG~yK~a~~pf 225 (330)
T PRK11778 147 LQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQ-IPNFHRLLKKHDIDVELHTAGEYKRTLTLF 225 (330)
T ss_pred HHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeee-ccCHHHHHHHCCCceEEEEecCccCCCCCC
Confidence 3445666899999999999999999999999999999988776554322 1221110
Q ss_pred --------hhhhHH-----------hCc-H-HHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHH
Q psy14406 124 --------QRLPRI-----------IGN-Q-SLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGA 171 (275)
Q Consensus 124 --------~~l~r~-----------~G~-~-~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a 171 (275)
..+... +-. + ....+-+.+|+.+++++|++.||||++... +++...+
T Consensus 226 ~~~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~-dd~i~~~ 293 (330)
T PRK11778 226 GENTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTS-DDYLLEL 293 (330)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCH-HHHHHHH
Confidence 000000 000 0 011234568999999999999999999876 5554433
|
|
| >PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.2e-05 Score=70.79 Aligned_cols=93 Identities=22% Similarity=0.282 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHH
Q psy14406 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEI 139 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l 139 (275)
.+.+.+++..+.....|+|+.|-|.+.|||......||++++.+++.|+ +.++-|....|-+-- .++.+.
T Consensus 175 ~~aia~~l~~~a~~~VP~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~---~~a~~a 244 (319)
T PRK05724 175 SEAIARNLREMARLKVPIICTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDA---SKAPEA 244 (319)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCc---hhHHHH
Confidence 4455667788889999999999999988887666679999999998776 455555544444432 233333
Q ss_pred HhcCCCCCHHHHHHcCCcccccCC
Q psy14406 140 AFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 140 ~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
. ....+++.++++.|+||.|++.
T Consensus 245 a-e~~~ita~~l~~~g~iD~II~E 267 (319)
T PRK05724 245 A-EAMKITAQDLKELGIIDEIIPE 267 (319)
T ss_pred H-HHcCCCHHHHHHCCCceEeccC
Confidence 3 2567999999999999999974
|
|
| >TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.5e-05 Score=69.38 Aligned_cols=93 Identities=23% Similarity=0.267 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHH
Q psy14406 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEI 139 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l 139 (275)
.+.+.+.+..+.....|+|+.|-|.|.|||......||++++.+++.++ +.++-|....|-+-- .++.+.
T Consensus 175 ~~aia~~l~a~s~~~VP~IsVViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~---~~a~~a 244 (316)
T TIGR00513 175 SEAIARNLREMARLGVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDA---SKAPKA 244 (316)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccch---hhHHHH
Confidence 3445666777888899999999999988877666679999999999776 444444444443321 122222
Q ss_pred HhcCCCCCHHHHHHcCCcccccCC
Q psy14406 140 AFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 140 ~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
. .-..+++.++++.|+||.|+|.
T Consensus 245 a-e~~~~ta~~l~~~G~iD~II~e 267 (316)
T TIGR00513 245 A-EAMKITAPDLKELGLIDSIIPE 267 (316)
T ss_pred H-HHccCCHHHHHHCCCCeEeccC
Confidence 2 2367789999999999999974
|
The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. |
| >PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.3e-05 Score=72.40 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHH
Q psy14406 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEI 139 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l 139 (275)
...+...+..+.....|+|+.|-|.+.+||......||++++.+++.++ +.++-|....|-+--.....+.+
T Consensus 245 a~aIAr~l~ams~l~VPiISVViGeGgSGGAlalg~aD~VlMle~A~ys-------VisPEgaAsILwkd~~~A~eAAe- 316 (431)
T PLN03230 245 GEAIAFNLREMFGLRVPIIATVIGEGGSGGALAIGCGNRMLMMENAVYY-------VASPEACAAILWKSAAAAPKAAE- 316 (431)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCCcHHHHHhhcCCEEEEecCCEEE-------ecCHHHHHHHHhccccchHHHHH-
Confidence 3445666778889999999999999966666555578999999998766 33333333333322111122222
Q ss_pred HhcCCCCCHHHHHHcCCcccccCC
Q psy14406 140 AFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 140 ~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.-.+++.++++.|+||+|++.
T Consensus 317 ---alkitA~dL~~~GiID~II~E 337 (431)
T PLN03230 317 ---ALRITAAELVKLGVVDEIVPE 337 (431)
T ss_pred ---HcCCCHHHHHhCCCCeEeccC
Confidence 448999999999999999974
|
|
| >PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.6e-05 Score=74.14 Aligned_cols=121 Identities=13% Similarity=0.084 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHH
Q psy14406 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEI 139 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l 139 (275)
...+.+.+..+.....|+|++|-|.|.|||......||++++.++++|+ +.++-|+...|-+-.. ++. -
T Consensus 266 ~~aIArnl~amasl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~---~A~-e 334 (762)
T PLN03229 266 GEAIAHNLRTMFGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAK---AAP-K 334 (762)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCcc---cHH-H
Confidence 3455666777888999999999999998888888889999999998765 3444444444433322 232 3
Q ss_pred HhcCCCCCHHHHHHcCCcccccCCh------------hHHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy14406 140 AFTARKIEAAEARECGLVSKLYDDK------------ESLLAGAIELGELIASKSPVAVQGTKK 191 (275)
Q Consensus 140 ~ltG~~~~a~eA~~~GLv~~vv~~~------------~~l~~~a~~~a~~la~~~~~a~~~~K~ 191 (275)
+-..-.+|+.+.++.|+||+|+|.. ..+..........+...++..+...+.
T Consensus 335 AAe~lkiTa~dL~~lGiiD~IIpEp~ggAh~d~~~~~~~l~~~i~~~L~~l~~~~~~~l~~~R~ 398 (762)
T PLN03229 335 AAEKLRITAQELCRLQIADGIIPEPLGGAHADPSWTSQQIKIAINENMDELGKMDTEELLKHRM 398 (762)
T ss_pred HHHHcCCCHHHHHhCCCCeeeccCCCCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4456789999999999999999742 122233344445566666665554443
|
|
| >PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.8e-06 Score=69.02 Aligned_cols=98 Identities=19% Similarity=0.326 Sum_probs=66.9
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchhh---------------hhhhH
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGAL---------------QRLPR 128 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r 128 (275)
++..|..++.|+++.+.|.|.+.|.-++++|+. |++.+++.|.+-+...+......-. ..+..
T Consensus 66 i~~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~ 145 (182)
T PF00574_consen 66 IYDAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAE 145 (182)
T ss_dssp HHHHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 355667779999999999999999999999999 8999999999888865554311111 11222
Q ss_pred HhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 129 IIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 129 ~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
..|. .....+++-...-++++||+++||||+|+.+
T Consensus 146 ~tg~~~~~i~~~~~~~~~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 146 RTGLSKEEIEELMDRDTWLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp HHTS-HHHHHHHCSSTEEEEHHHHHHHTSSSEEESS
T ss_pred HhCCcHHHHHHHHhCCccccHHHHHHcCCCCEeccC
Confidence 2221 1222334444455899999999999999864
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A .... |
| >TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP | Back alignment and domain information |
|---|
Probab=98.09 E-value=5e-05 Score=64.00 Aligned_cols=96 Identities=16% Similarity=0.207 Sum_probs=64.2
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchhh---------------hhhhHH
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGAL---------------QRLPRI 129 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r~ 129 (275)
+..|...+.|+...+.|.|.+.|.-|++++| .|++.++++|.+-...-|......-. ..+.+.
T Consensus 77 ~d~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~ 156 (191)
T TIGR00493 77 YDTMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANH 156 (191)
T ss_pred HHHHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555667878888999999999998766 69999999988866543321111111 112333
Q ss_pred hCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccC
Q psy14406 130 IGN-QSLVNEIAFTARKIEAAEARECGLVSKLYD 162 (275)
Q Consensus 130 ~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~ 162 (275)
.|. .....+++-.+.-++|+||+++||||+++.
T Consensus 157 tg~~~~~i~~~~~~~~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 157 TGQSLEQIEKDTERDFFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred HCcCHHHHHHHhhCCccCcHHHHHHcCCccEEec
Confidence 332 123445556677799999999999999874
|
This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model. |
| >KOG1683|consensus | Back alignment and domain information |
|---|
Probab=98.05 E-value=7.7e-07 Score=80.45 Aligned_cols=159 Identities=17% Similarity=0.123 Sum_probs=115.5
Q ss_pred HHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
|..-++++..+..+++...|+.. +.|++|.|..+...... +.....+-.+++++.+.++++.|+.++
T Consensus 87 l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~h------------~fspa~~m~LlEii~~~~tS~~~iA~A 154 (380)
T KOG1683|consen 87 LFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGMH------------FFSPAHWMQLLEIILALYTSKLTIATA 154 (380)
T ss_pred HHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcccc------------ccCHHHHHHHHHHHHhcCCCchHHHHH
Confidence 44556777788888999999988 99999999988754322 223344567789999999999999999
Q ss_pred ECchhchHH--HHHHHHCCEEEEeCC--ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCC
Q psy14406 81 VHGACIGGG--MSLITAADIRYATKD--AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL 156 (275)
Q Consensus 81 v~G~a~GgG--~~lal~~D~rva~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GL 156 (275)
+||++--|+ +-+..+|+|+|...- -..+..+...++.-+-.-.-.+...+|. ..+-.-+--+.-++-.||++-|+
T Consensus 155 in~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf-~~g~~~L~d~~gfdv~eal~~gl 233 (380)
T KOG1683|consen 155 INGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITKFGF-RVGERALADGVGFDVAEALAVGL 233 (380)
T ss_pred HhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCc-cccHHHHhhccCccHHHHHhhcc
Confidence 999999998 889999999999843 3346777776633322222233334442 33435566788899999999999
Q ss_pred cccccCC-hhHHHHHHHH
Q psy14406 157 VSKLYDD-KESLLAGAIE 173 (275)
Q Consensus 157 v~~vv~~-~~~l~~~a~~ 173 (275)
++.+.+. .+++.+....
T Consensus 234 ~~~~~~r~~eel~~~~~~ 251 (380)
T KOG1683|consen 234 GDEIGPRIEEELLEKGRA 251 (380)
T ss_pred chhccchhHHHHHHHHhh
Confidence 9999984 3555554433
|
|
| >CHL00028 clpP ATP-dependent Clp protease proteolytic subunit | Back alignment and domain information |
|---|
Probab=98.03 E-value=8.8e-05 Score=62.92 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=68.1
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCc-ccCchh---------------hhhhh
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGL-TADVGA---------------LQRLP 127 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~-~p~~g~---------------~~~l~ 127 (275)
++..|...+.||...+.|.|.+.|.-|++++| .|++.++++|.+-....|+ .....- ...+.
T Consensus 80 Iyd~m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ya 159 (200)
T CHL00028 80 IYDTMQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVYA 159 (200)
T ss_pred HHHHHHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667899999999999999999999999 6999999998877765442 111100 11122
Q ss_pred HHhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 128 RIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 128 r~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
...|. .....+++-...-++|+||+++||||+|+.+
T Consensus 160 ~~Tg~~~e~i~~~~~r~~~lta~EA~eyGliD~I~~~ 196 (200)
T CHL00028 160 QRTGKPLWVISEDMERDVFMSATEAKAYGIVDLVAVN 196 (200)
T ss_pred HHHCcCHHHHHHHhhcCccCCHHHHHHcCCCcEEeec
Confidence 22331 1122444455566999999999999999875
|
|
| >PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.8e-06 Score=63.84 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHhhcccCCchHHhccccccccccCCcchhhHHHHHhccCccChHHHHHHH
Q psy14406 200 AVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDL 260 (275)
Q Consensus 200 ~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~ 260 (275)
++++.++.... ..+.+..-+...++++||+|++||++++++|+.+|+++||+..
T Consensus 17 s~~eI~~~L~~-------~~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E 70 (118)
T PF13766_consen 17 SVEEIIEALEA-------DGDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRME 70 (118)
T ss_dssp SHHHHHHHHHH-------HS-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHH
T ss_pred CHHHHHHHHHc-------cCcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 77777777665 2233466788889999999999999999999999999999753
|
|
| >PF01343 Peptidase_S49: Peptidase family S49 peptidase classification | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.9e-05 Score=64.22 Aligned_cols=102 Identities=23% Similarity=0.265 Sum_probs=61.9
Q ss_pred hcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccc------------cCcc---------cCch-----h--
Q psy14406 71 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVD------------IGLT---------ADVG-----A-- 122 (275)
Q Consensus 71 ~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~------------~G~~---------p~~g-----~-- 122 (275)
....||+||.++|.+..+++.|+.+||-+++.+.+.++...+. +|+- -+.+ .
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 4568999999999999999999999999999999887765443 2321 1111 0
Q ss_pred --hhhhhHH-----------h----CcHHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHH
Q psy14406 123 --LQRLPRI-----------I----GNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173 (275)
Q Consensus 123 --~~~l~r~-----------~----G~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~ 173 (275)
-..+.+. + |......+-+..|..+++++|++.||||++-.. +++...+.+
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~-~~~~~~l~~ 149 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTF-DEAIARLAK 149 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCH-HHHHHHHHH
Confidence 0000000 0 000011223578999999999999999999764 666555443
|
; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A. |
| >TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00018 Score=70.60 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=60.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
++.++++.+.+|+.|++|||.-.+ +.|+++..+ ..+++.+..+....|||||.
T Consensus 80 ~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~------------------------~ei~~ai~~fk~sgKpVvA~ 132 (584)
T TIGR00705 80 DIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHL------------------------VEIGSALSEFKDSGKPVYAY 132 (584)
T ss_pred HHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHH------------------------HHHHHHHHHHHhcCCeEEEE
Confidence 367889999999999999999753 224333221 12233345556668999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEecc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLK 110 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~p 110 (275)
.++++ -+|+.|+.+||-+++.+.+.+++.
T Consensus 133 ~~~~~-s~~YylAs~AD~I~~~p~G~v~~~ 161 (584)
T TIGR00705 133 GTNYS-QGQYYLASFADEIILNPMGSVDLH 161 (584)
T ss_pred Ecccc-chhhhhhhhCCEEEECCCceEEee
Confidence 98875 678999999999999998777553
|
E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. |
| >TIGR03133 malonate_beta malonate decarboxylase, beta subunit | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00038 Score=61.65 Aligned_cols=84 Identities=18% Similarity=0.180 Sum_probs=59.3
Q ss_pred HHhhcCCCcEEEEECch--hchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCc-HHHHHHHHhcCC
Q psy14406 68 SSLERCPKPVISAVHGA--CIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGN-QSLVNEIAFTAR 144 (275)
Q Consensus 68 ~~l~~~~kP~Ia~v~G~--a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~-~~~a~~l~ltG~ 144 (275)
..+... .|+|+.+-|+ |+||+..++..||++|+++++++++... ...-...|. .-...+-.|..+
T Consensus 131 ~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aGP-----------~VIe~~~G~e~~~~~d~~l~~~ 198 (274)
T TIGR03133 131 LDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSGP-----------EVIEQEAGVEEFDSRDRALVWR 198 (274)
T ss_pred HHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccCH-----------HHHHHhcCCCccCHHHhccccc
Confidence 334444 9999999999 8999999999999999999987765221 111112221 011234445556
Q ss_pred CCCHHHHHHcCCcccccCC
Q psy14406 145 KIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 145 ~~~a~eA~~~GLv~~vv~~ 163 (275)
.+.++.....|++|.++++
T Consensus 199 ~lGG~~~~~sG~~D~~v~d 217 (274)
T TIGR03133 199 TTGGKHRFLSGDADVLVED 217 (274)
T ss_pred ccchHhHhhcccceEEeCC
Confidence 6777888899999999986
|
Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase. |
| >PRK07189 malonate decarboxylase subunit beta; Reviewed | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00056 Score=61.31 Aligned_cols=85 Identities=20% Similarity=0.259 Sum_probs=55.9
Q ss_pred HHhhcCCCcEEEEECch--hchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCc-HHHHHHHHhcCC
Q psy14406 68 SSLERCPKPVISAVHGA--CIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGN-QSLVNEIAFTAR 144 (275)
Q Consensus 68 ~~l~~~~kP~Ia~v~G~--a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~-~~~a~~l~ltG~ 144 (275)
..+... .|+|+.+-|. |+||+...+..||++|+++++++++.... ..-...|. .-...+..+..+
T Consensus 140 ~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~iglaGP~-----------VIe~~~G~e~~d~~d~~~vw~ 207 (301)
T PRK07189 140 VDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLSGPE-----------VIEQEAGVEEFDSRDRALVWR 207 (301)
T ss_pred HHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEeccCHH-----------HHHHhcCCcccCHHHhccccc
Confidence 344444 9999999999 99999999999999999999877753211 11111120 011223333334
Q ss_pred CCCHHHHHHcCCcccccCCh
Q psy14406 145 KIEAAEARECGLVSKLYDDK 164 (275)
Q Consensus 145 ~~~a~eA~~~GLv~~vv~~~ 164 (275)
.+.+......|.+|.++++.
T Consensus 208 ~lGG~h~~~sG~~D~~v~dd 227 (301)
T PRK07189 208 TTGGKHRYLSGLADALVDDD 227 (301)
T ss_pred ccCcceeeecccceEEeCCH
Confidence 44445566799999999873
|
|
| >PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00039 Score=59.76 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=66.5
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchhh---------------hhhhHH
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGAL---------------QRLPRI 129 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r~ 129 (275)
+..|...+-||...+.|.|.+.|.-|++++|. |++.++++|.+-...-|......-. ..+.+.
T Consensus 105 yd~m~~~~~~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~ 184 (221)
T PRK14514 105 YDTMQFISSDVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADH 184 (221)
T ss_pred HHHHHhcCCCEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566668899999999999999999999996 8999999987766543332111100 012222
Q ss_pred hCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 130 IGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 130 ~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.|. .....+.+-...-++|+||+++||||+|+..
T Consensus 185 TG~~~e~I~~~~~rd~wmtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 185 SGTPFDKVWADSDRDYWMTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred HCcCHHHHHHHhhcCccCCHHHHHHcCCccEEeec
Confidence 331 1122334445566999999999999999864
|
|
| >PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00032 Score=59.27 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=65.3
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchhh---------------hhhhHH
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGAL---------------QRLPRI 129 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r~ 129 (275)
+..|...+-||...+.|.|.+.|.-|++++|- |++.+++++.+-...-|..-...-. ..+...
T Consensus 76 yd~m~~~~~~V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~ 155 (196)
T PRK12551 76 FDTMQHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSER 155 (196)
T ss_pred HHHHHhcCCCEEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556668899999999999999999999985 8899999987766543321111000 112222
Q ss_pred hCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 130 IGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 130 ~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.|. .....+++-...-++|+||+++||||+|++.
T Consensus 156 tG~~~~~i~~~~~rd~~msa~EA~eyGliD~I~~~ 190 (196)
T PRK12551 156 TGQPLERIQEDTDRDFFMSPSEAVEYGLIDLVIDK 190 (196)
T ss_pred HCcCHHHHHHHhhcCcCCCHHHHHHcCCCcEEecc
Confidence 331 1122334444556999999999999999975
|
|
| >PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00039 Score=60.96 Aligned_cols=57 Identities=19% Similarity=0.134 Sum_probs=51.2
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchh
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA 122 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~ 122 (275)
+...+.+++.|+++.|+..|+.+|.-++++||-+|+.+++.+|--+..+|-.|....
T Consensus 110 I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~si 166 (285)
T PF01972_consen 110 IARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASI 166 (285)
T ss_pred HHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHH
Confidence 355666779999999999999999999999999999999999999999999886543
|
The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane |
| >PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0012 Score=56.07 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=66.9
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchhhh-----------------hh
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGALQ-----------------RL 126 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~~~-----------------~l 126 (275)
++..|...+-||...+.|.|.+.+.-|++++|- |++.+++++-+-....|+. +.... .+
T Consensus 77 Iyd~m~~~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iy 154 (201)
T PRK14513 77 IYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIY 154 (201)
T ss_pred HHHHHHhcCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566668899999999999999999999995 9999999987766654431 11111 11
Q ss_pred hHHhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 127 PRIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 127 ~r~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.+..|. .....+++-...-++|+||+++||||+|+++
T Consensus 155 a~~Tg~~~~~I~~~~~rd~~msa~EA~eyGliD~I~~~ 192 (201)
T PRK14513 155 HRHTDLPHEKLLRDMERDYFMSPEEAKAYGLIDSVIEP 192 (201)
T ss_pred HHHHCcCHHHHHHHhccCcccCHHHHHHcCCCcEEecc
Confidence 222331 1122334444556999999999999999975
|
|
| >TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0011 Score=57.57 Aligned_cols=89 Identities=19% Similarity=0.130 Sum_probs=58.4
Q ss_pred HHHHHhhcCCCcEEEEECchhchHHH-HHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcC
Q psy14406 65 KSISSLERCPKPVISAVHGACIGGGM-SLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTA 143 (275)
Q Consensus 65 ~~~~~l~~~~kP~Ia~v~G~a~GgG~-~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG 143 (275)
..+......+.|+|+.|-|.++|||+ .+.+.+|.+++-+++.++ ..+.-+.+..+.+-.. ...++.-+-
T Consensus 98 ~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A~i~-------vm~~e~aa~I~~~~~~---~~~e~a~~~ 167 (238)
T TIGR03134 98 KALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAMVH-------VMDLESMARVTKRSVE---ELEALAKSS 167 (238)
T ss_pred HHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCcEEE-------ecCHHHHHHHHccCHh---HHHHHHHhh
Confidence 33444445569999999999999887 444457888877776554 5555555444443322 233443222
Q ss_pred --CCCCHHHHHHcCCcccccCC
Q psy14406 144 --RKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 144 --~~~~a~eA~~~GLv~~vv~~ 163 (275)
...+...+.+.|+||.|++.
T Consensus 168 ~~~a~~~~~~~~~G~vd~vi~~ 189 (238)
T TIGR03134 168 PVFAPGIENFVKLGGVHALLDV 189 (238)
T ss_pred hhhccCHHHHHhCCCccEEeCC
Confidence 23566779999999999986
|
Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity. |
| >PRK10949 protease 4; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0023 Score=63.11 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=57.1
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.++++++.+||.|++|||+-.+. .|..+.. ...+++.+..+....||+||.-
T Consensus 100 iv~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~------------------------~~eI~~ai~~fk~sGKpVvA~~ 152 (618)
T PRK10949 100 IVNTIRQAKDDRNITGIVLDLKNF---AGADQPS------------------------MQYIGKALREFRDSGKPVYAVG 152 (618)
T ss_pred HHHHHHHHhcCCCceEEEEEeCCC---CCccHHH------------------------HHHHHHHHHHHHHhCCeEEEEe
Confidence 677899999999999999997531 1222211 1122334555566689999965
Q ss_pred CchhchHHHHHHHHCCEEEEeCCceEecc
Q psy14406 82 HGACIGGGMSLITAADIRYATKDAWFTLK 110 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~rva~~~a~f~~p 110 (275)
+.+ --+++.|+.+||-+++.+.+.+++.
T Consensus 153 ~~~-~s~~YyLASaAD~I~l~P~G~v~~~ 180 (618)
T PRK10949 153 DSY-SQGQYYLASFANKIYLSPQGVVDLH 180 (618)
T ss_pred cCc-cchhhhhhhhCCEEEECCCceEEEe
Confidence 555 4578999999999999998876544
|
|
| >COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0063 Score=51.30 Aligned_cols=95 Identities=20% Similarity=0.307 Sum_probs=61.2
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCEE--EEeCCceEeccccccCcccCchh-hh---------------hhhH
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADIR--YATKDAWFTLKEVDIGLTADVGA-LQ---------------RLPR 128 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~r--va~~~a~f~~pe~~~G~~p~~g~-~~---------------~l~r 128 (275)
+..|...+.||...+.|.|..-|.-|+++++.. ++.++|++-.--.. |.+-+... .. .+..
T Consensus 78 ydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i~a~ 156 (200)
T COG0740 78 YDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRIYAE 156 (200)
T ss_pred HHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566699999999999999999999999985 88888876654443 22211111 00 0111
Q ss_pred HhCcHHH--HHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 129 IIGNQSL--VNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 129 ~~G~~~~--a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
..|. .. -....-...-++|+||+++||||+|...
T Consensus 157 ~TGq-~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~ 192 (200)
T COG0740 157 HTGQ-TLEKIEKDTDRDTWMSAEEAKEYGLIDKVIES 192 (200)
T ss_pred HcCC-CHHHHHHhhcccccCCHHHHHHcCCcceeccc
Confidence 1221 11 1112223445899999999999999976
|
|
| >PRK05654 acetyl-CoA carboxylase subunit beta; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0039 Score=55.92 Aligned_cols=97 Identities=16% Similarity=0.166 Sum_probs=66.0
Q ss_pred HHHhhcCCCcEEEEECchhchHHHH-HHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCC
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMS-LITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARK 145 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~-lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~ 145 (275)
+.++.....|.|+.+.|+|.||+.. .++.+|++|+.+++.+++-..+ .+...++. ++ .-+.
T Consensus 187 ~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~e-----~l--pe~~ 248 (292)
T PRK05654 187 LKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVRE-----KL--PEGF 248 (292)
T ss_pred HHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhhh-----hh--hhhh
Confidence 4445566899999999999999764 5777999999998877653221 11111121 11 1112
Q ss_pred CCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCC
Q psy14406 146 IEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182 (275)
Q Consensus 146 ~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~ 182 (275)
-+++-+.+.|+||.|+++ .++.....++.+.+...+
T Consensus 249 ~~ae~~~~~G~vD~Vv~~-~e~r~~l~~~L~~~~~~~ 284 (292)
T PRK05654 249 QRAEFLLEHGAIDMIVHR-RELRDTLASLLALHTKQP 284 (292)
T ss_pred cCHHHHHhCCCCcEEECH-HHHHHHHHHHHHHHhcCC
Confidence 245667789999999997 788888777777665443
|
|
| >TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0043 Score=55.42 Aligned_cols=94 Identities=12% Similarity=0.140 Sum_probs=64.1
Q ss_pred HHHhhcCCCcEEEEECchhchHHHH-HHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCC
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMS-LITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARK 145 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~-lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~ 145 (275)
+.++.....|.|+++.|+|.||+.. .++.+|++|+.+++.+++...+ .+...+|. ++ .-+-
T Consensus 186 ~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e-----~l--pe~~ 247 (285)
T TIGR00515 186 LAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVRE-----KL--PEGF 247 (285)
T ss_pred HHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcC-----cc--chhc
Confidence 3455666899999999999999664 5679999999999877763332 11222221 11 1112
Q ss_pred CCHHHHHHcCCcccccCChhHHHHHHHHHHHHHh
Q psy14406 146 IEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179 (275)
Q Consensus 146 ~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la 179 (275)
-+++-+.+.|+||.|+++ .++.+....+..-+.
T Consensus 248 q~ae~~~~~G~vD~iv~~-~~~r~~l~~~L~~~~ 280 (285)
T TIGR00515 248 QTSEFLLEHGAIDMIVHR-PEMKKTLASLLAKLQ 280 (285)
T ss_pred CCHHHHHhCCCCcEEECc-HHHHHHHHHHHHHHh
Confidence 245557789999999998 788887777666543
|
The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. |
| >COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0024 Score=56.31 Aligned_cols=90 Identities=24% Similarity=0.318 Sum_probs=67.0
Q ss_pred HHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhc
Q psy14406 63 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFT 142 (275)
Q Consensus 63 ~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~lt 142 (275)
+.+-+..+.+++.|+||.|=|---+||.--...+|.+.+-++++|+. +.|.+.+ ..|-+- .+++.+ +-.
T Consensus 177 IA~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~A-sILWkD---~~ka~e-AAe 245 (317)
T COG0825 177 IARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCA-SILWKD---ASKAKE-AAE 245 (317)
T ss_pred HHHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhh-hhhhcC---hhhhHH-HHH
Confidence 44456678889999999999988777776666779999999999983 3444444 344332 234443 346
Q ss_pred CCCCCHHHHHHcCCcccccCC
Q psy14406 143 ARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 143 G~~~~a~eA~~~GLv~~vv~~ 163 (275)
.-.+++.+.+++|+||.|+|.
T Consensus 246 ~mkita~dLk~lgiID~II~E 266 (317)
T COG0825 246 AMKITAHDLKELGIIDGIIPE 266 (317)
T ss_pred HcCCCHHHHHhCCCcceeccC
Confidence 678999999999999999975
|
|
| >PRK12552 ATP-dependent Clp protease-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.02 Score=49.31 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=63.2
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchhhh-----------------hhh
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGALQ-----------------RLP 127 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~~~-----------------~l~ 127 (275)
+..|...+-||...+.|.|.+.+.-|++++|- |++.++++|-+-....|.. +-.+- .+.
T Consensus 100 yD~m~~ik~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iya 177 (222)
T PRK12552 100 CDTMRYIKPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEILS 177 (222)
T ss_pred HHHHHhcCCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555567789999999999999999999995 8999999987766554432 11111 111
Q ss_pred HHhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 128 RIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 128 r~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
...|. ...-.+++-.-.-++|+||+++||||+|+.+
T Consensus 178 ~~TG~~~e~I~~d~~rd~wmsA~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 178 RNTGQTVEKLSKDTDRMFYLTPQEAKEYGLIDRVLES 214 (222)
T ss_pred HHHCCCHHHHHHHhcCCCcCCHHHHHHcCCCcEEecc
Confidence 11221 0111222223345999999999999999965
|
|
| >PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.01 Score=57.24 Aligned_cols=86 Identities=35% Similarity=0.459 Sum_probs=58.8
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCC
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARK 145 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~ 145 (275)
...+.. ..|+|+++.|+|.|||..++..||++|++++ +.+++... + ..+ ..+|+.
T Consensus 125 ~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~GP---------------~-------vv~-~~~Ge~ 180 (493)
T PF01039_consen 125 IARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLAGP---------------R-------VVE-SATGEE 180 (493)
T ss_dssp HHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESSTH---------------H-------HHH-HHHSSC
T ss_pred HHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEEeccc---------------c-------ccc-cccCcc
Confidence 344555 8999999999999999999999999999988 76653211 1 111 224577
Q ss_pred CCHHH-------HHHcCCcccccCChhHHHHHHHHHHH
Q psy14406 146 IEAAE-------ARECGLVSKLYDDKESLLAGAIELGE 176 (275)
Q Consensus 146 ~~a~e-------A~~~GLv~~vv~~~~~l~~~a~~~a~ 176 (275)
++.++ +...|.+|.++++.++..+.+.++..
T Consensus 181 ~~~~~lgG~~~h~~~sG~~d~v~~de~~a~~~ir~~ls 218 (493)
T PF01039_consen 181 VDSEELGGADVHAAKSGVVDYVVDDEEDALAQIRRLLS 218 (493)
T ss_dssp TSHHHHHBHHHHHHTSSSSSEEESSHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhcccCCCceEEEechHHHHHHHHHhhc
Confidence 77654 35789999999873333344444443
|
The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F .... |
| >CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.039 Score=49.38 Aligned_cols=86 Identities=16% Similarity=0.089 Sum_probs=56.9
Q ss_pred cCCCcEEEEECchhchHHHHH-HHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHH
Q psy14406 72 RCPKPVISAVHGACIGGGMSL-ITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAE 150 (275)
Q Consensus 72 ~~~kP~Ia~v~G~a~GgG~~l-al~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~e 150 (275)
.-..|+|+.+.|+|.||+... ++.||++|+.+++.+++...+ .....+|. -+.-.-=+++-
T Consensus 205 ~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPr-----------VIe~t~ge-------~lpe~fq~ae~ 266 (296)
T CHL00174 205 NKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKR-----------VIEQTLNK-------TVPEGSQAAEY 266 (296)
T ss_pred cCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHH-----------HHHHhcCC-------cCCcccccHHH
Confidence 447999999999999998866 666999999888876643221 01111110 01111123555
Q ss_pred HHHcCCcccccCChhHHHHHHHHHHH
Q psy14406 151 ARECGLVSKLYDDKESLLAGAIELGE 176 (275)
Q Consensus 151 A~~~GLv~~vv~~~~~l~~~a~~~a~ 176 (275)
.++.|+||.+|+. .++.+....+..
T Consensus 267 l~~~G~vD~iV~r-~~lr~~l~~ll~ 291 (296)
T CHL00174 267 LFDKGLFDLIVPR-NLLKGVLSELFQ 291 (296)
T ss_pred HHhCcCceEEEcH-HHHHHHHHHHHH
Confidence 7799999999997 788777666554
|
|
| >COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0096 Score=55.63 Aligned_cols=110 Identities=17% Similarity=0.213 Sum_probs=78.2
Q ss_pred HHHHHHHHHHhhcCCCcEEEEE---CchhchHHHHHHHHCCEEEEeCCceEeccccc-cC-cccC-ch-hhhh------h
Q psy14406 60 ITTYQKSISSLERCPKPVISAV---HGACIGGGMSLITAADIRYATKDAWFTLKEVD-IG-LTAD-VG-ALQR------L 126 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v---~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~-~G-~~p~-~g-~~~~------l 126 (275)
.+...++++.+.+.|.|++..| .++|..+|..++++||+..+.+.+.++--..- .| -.++ .. ..+. +
T Consensus 71 ~~sm~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~ 150 (436)
T COG1030 71 LDSMRQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSL 150 (436)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHH
Confidence 3455678899999999988888 45799999999999999999999988765433 22 1111 11 1111 2
Q ss_pred hHHhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHH
Q psy14406 127 PRIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLA 169 (275)
Q Consensus 127 ~r~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~ 169 (275)
.+.-|. ...+.+++.....++++||++.|++|-+..+..++..
T Consensus 151 A~~~gRN~~~ae~~v~~~~~l~a~eA~~~~vid~iA~~~~ell~ 194 (436)
T COG1030 151 AEERGRNPTWAERFVTENLSLTAEEALRQGVIDLIARDLNELLK 194 (436)
T ss_pred HHHcCCChHHHHHHhhhccCCChhHHHhcCccccccCCHHHHHH
Confidence 222232 2356778888999999999999999999876444443
|
|
| >TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.05 Score=52.74 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhhHH-hC--
Q psy14406 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI-IG-- 131 (275)
Q Consensus 59 ~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~G-- 131 (275)
.++..-+++..+.....|+|+.|-|.+.|||..-+. .+|++++.+++.++ +.++-++...+-+. +.
T Consensus 373 ~~~~~a~~~~a~~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~ 445 (512)
T TIGR01117 373 IIRHGAKVLYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEA 445 (512)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccc
Confidence 344555677888888999999999999888654443 28999888887665 43333332222211 10
Q ss_pred -cHHHHH-H-HH-hcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 132 -NQSLVN-E-IA-FTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 132 -~~~~a~-~-l~-ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
....++ + +. ..-+..++..+.+.|+||.|+++ .++........+.+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~a~~g~vD~VI~P-~~tR~~l~~~l~~~ 495 (512)
T TIGR01117 446 KDPAATRKQKIAEYREEFANPYKAAARGYVDDVIEP-KQTRPKIVNALAML 495 (512)
T ss_pred cCHHHHHHHHHHHHHHhhcCHHHHHhcCCCCeeECh-HHHHHHHHHHHHHH
Confidence 001111 1 11 11234578889999999999998 77777665555543
|
This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. |
| >PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.013 Score=45.51 Aligned_cols=65 Identities=20% Similarity=0.193 Sum_probs=53.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc-cCC
Q psy14406 171 AIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH-DCP 235 (275)
Q Consensus 171 a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~-~sp 235 (275)
+.+..+.|...+|.++..+-+.++++...++.+.+..+..........+||.||+.+.++.| ++|
T Consensus 33 a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~~~DF~EGVRA~LIDKd~~P 98 (118)
T PF13766_consen 33 AQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMRHPDFAEGVRALLIDKDKNP 98 (118)
T ss_dssp HHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHCCSCHHHHHHHHTTS-----
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhccchHHHHHHHHHhcCCCCC
Confidence 55566788999999999999999999999999999999998888888999999999999954 556
|
|
| >COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.081 Score=46.50 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=69.5
Q ss_pred HHHHHHHhhcCCCcEEEEECchhchH-HHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHh
Q psy14406 63 YQKSISSLERCPKPVISAVHGACIGG-GMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAF 141 (275)
Q Consensus 63 ~~~~~~~l~~~~kP~Ia~v~G~a~Gg-G~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~l 141 (275)
....+.++.....|+|+.+..+.+|| ...+++..|+.||.++|.+++...+ .|- +..++-+-
T Consensus 184 tsaAl~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpR---------------VIE--QTire~LP 246 (294)
T COG0777 184 TSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPR---------------VIE--QTIREKLP 246 (294)
T ss_pred HHHHHHHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcch---------------hhh--hhhcccCC
Confidence 34456777788999999999999998 4589999999999988876654322 110 01111111
Q ss_pred cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCC
Q psy14406 142 TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182 (275)
Q Consensus 142 tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~ 182 (275)
. .--+++-.++.|+||.||.. .++......+...+...+
T Consensus 247 e-gfQ~aEfLlehG~iD~iv~R-~elr~tla~ll~~~~~~~ 285 (294)
T COG0777 247 E-GFQTAEFLLEHGMIDMIVHR-DELRTTLASLLAKLTPQP 285 (294)
T ss_pred c-chhhHHHHHHcCCceeeecH-HHHHHHHHHHHHHhCCCC
Confidence 1 12235567799999999997 788887777776665544
|
|
| >TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.018 Score=55.69 Aligned_cols=89 Identities=22% Similarity=0.345 Sum_probs=58.1
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCCc-eEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHH
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKDA-WFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEAR 152 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a-~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~ 152 (275)
..|+|+++.|.|.||+......||++|+++++ .+.+. +...+....|. -++.+.+.+.+..
T Consensus 154 ~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~a-----------GP~vv~~~~Ge-------~v~~e~lGGa~~h 215 (512)
T TIGR01117 154 VVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT-----------GPQVIKTVTGE-------EVTAEQLGGAMAH 215 (512)
T ss_pred CCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEec-----------ChHHHHhhcCc-------ccchhhcchHHHh
Confidence 58999999999999999888899999999864 44431 11111111221 0133334444433
Q ss_pred --HcCCcccccCChhHHHHHHHHHHHHHhc
Q psy14406 153 --ECGLVSKLYDDKESLLAGAIELGELIAS 180 (275)
Q Consensus 153 --~~GLv~~vv~~~~~l~~~a~~~a~~la~ 180 (275)
..|.+|.++++.++..+.+.++..-+..
T Consensus 216 ~~~sGv~d~~~~de~ea~~~~r~~ls~lp~ 245 (512)
T TIGR01117 216 NSVSGVAHFIAEDDDDCIMLIRRLLSFLPS 245 (512)
T ss_pred ccccceeEEecCChHHHHHHHHHHHHhCCc
Confidence 5899999998866676667666665543
|
This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. |
| >PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.17 Score=49.64 Aligned_cols=87 Identities=21% Similarity=0.257 Sum_probs=56.3
Q ss_pred HhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCC
Q psy14406 69 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIE 147 (275)
Q Consensus 69 ~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~ 147 (275)
++.....|+|++|-|.|.|||......||++|++++ +.+.+. +. .+.+. .+|+.++
T Consensus 200 ~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~a-----------GP-~vV~~-----------~~Ge~v~ 256 (569)
T PLN02820 200 RMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLA-----------GP-PLVKA-----------ATGEEVS 256 (569)
T ss_pred HHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEec-----------CH-HHHHh-----------hcCcccC
Confidence 355567999999999999999999999999999875 544431 11 11111 2344455
Q ss_pred HHHH-----H--HcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 148 AAEA-----R--ECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 148 a~eA-----~--~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
+++. . ..|.+|.++++..+..+.+.++..-+
T Consensus 257 ~eeLGGa~~h~~~sGv~d~~~~de~~a~~~~R~lls~L 294 (569)
T PLN02820 257 AEDLGGADVHCKVSGVSDHFAQDELHALAIGRNIVKNL 294 (569)
T ss_pred HHHhCCHHHhcccccccccccCchHHHHHHHHHHHHhc
Confidence 4443 3 48999999987433334444444444
|
|
| >PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.51 Score=46.34 Aligned_cols=112 Identities=13% Similarity=0.082 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhhHH-h--
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI-I-- 130 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~-- 130 (275)
..++...+++..+.....|.|+.|-|.+.|+|..-+. ..|++++.+++. +|..++-++...+.+. +
T Consensus 423 G~~~~~a~l~~A~a~~~VP~isvi~g~a~G~g~~aM~g~~~~~d~~~awp~A~-------i~vmg~e~aa~il~~~e~~~ 495 (569)
T PLN02820 423 GIAKAGAKMVMAVACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNAR-------IGVMGGAQAAGVLAQIEREN 495 (569)
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEECCcchHHHHHhcCcCCCCCEEEECCCCe-------EEecCHHHHHHHHHHHHhhh
Confidence 4566777888999999999999999999998776554 456766666654 5566665555444331 1
Q ss_pred ----C-----cHHHH-HH-H-HhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHH
Q psy14406 131 ----G-----NQSLV-NE-I-AFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177 (275)
Q Consensus 131 ----G-----~~~~a-~~-l-~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~ 177 (275)
| ....+ ++ + -..-+..++-.+.+.|++|.|+++ .+.........+.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~aa~~~~vD~VIdP-~dTR~~l~~~l~~ 553 (569)
T PLN02820 496 KKRQGIQWSKEEEEAFKAKTVEAYEREANPYYSTARLWDDGVIDP-ADTRRVLGLCLSA 553 (569)
T ss_pred hhhccccCCccHHHHHHHHHHHHHHHhCCHHHHHHcCCcCcccCH-HHHHHHHHHHHHH
Confidence 0 00000 01 1 111224567778899999999987 6666554444443
|
|
| >COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.049 Score=52.34 Aligned_cols=37 Identities=30% Similarity=0.460 Sum_probs=32.8
Q ss_pred HHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCc
Q psy14406 68 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA 105 (275)
Q Consensus 68 ~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a 105 (275)
.+++.. .|.|++|-|.|.|||..+...||++|+.+++
T Consensus 158 a~~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 158 ARASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred HHhccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 344455 9999999999999999999999999999984
|
|
| >PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.14 Score=47.70 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=32.9
Q ss_pred hccccccccccCCcchhhHHHHHhccCccChHHHHHHH
Q psy14406 223 KGVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDL 260 (275)
Q Consensus 223 e~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~ 260 (275)
....+..+.+.||+|++++.++++++...++++||+..
T Consensus 266 A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e 303 (379)
T PLN02874 266 IKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKE 303 (379)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 33566677889999999999999999999999999875
|
|
| >PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.32 Score=47.02 Aligned_cols=116 Identities=18% Similarity=0.131 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHC----CEEEEeCCceEeccccccCcccCchhhhhhhHHh-C-
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAA----DIRYATKDAWFTLKEVDIGLTADVGALQRLPRII-G- 131 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~----D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-G- 131 (275)
..++..-+++..+..+..|+|..|-|.+.|||....... |+++|.+++.++ +.++-+....+-+.- -
T Consensus 351 g~~~~ga~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~-------vm~~e~a~~i~~~~~~~~ 423 (493)
T PF01039_consen 351 GIIRAGARLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIG-------VMGPEGAASILYRDELEA 423 (493)
T ss_dssp THHHHHHHHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEE-------SS-HHHHHHHHTHHHHHH
T ss_pred chHHHHHHHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceee-------ecChhhhheeeehhhhhh
Confidence 445666778889999999999999999999888665555 788777777665 544444433332221 0
Q ss_pred -------cHHHHHHHH-h-cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcC
Q psy14406 132 -------NQSLVNEIA-F-TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181 (275)
Q Consensus 132 -------~~~~a~~l~-l-tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~ 181 (275)
......+++ - .-...++..+...|++|.++++ .+..........-+.+.
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~D~ii~p-~~tR~~l~~~l~~~~~~ 481 (493)
T PF01039_consen 424 AEAEGADPEAQRAEKIAEYEDELSSPYRAASRGYVDDIIDP-AETRKVLIAALEMLWQK 481 (493)
T ss_dssp SCHCCHSHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEESSG-GGHHHHHHHHHHHHTTS
T ss_pred hhcccchhHHHHHHHHHHHHHhcCCHHHHHhcCCCCCccCH-HHHHHHHHHHHHHHHhC
Confidence 000011111 1 1122578899999999999987 67777665555444333
|
The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F .... |
| >PLN02988 3-hydroxyisobutyryl-CoA hydrolase | Back alignment and domain information |
|---|
Probab=90.77 E-value=0.55 Score=43.86 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=54.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccC---CchHHhccccccccc-cCCcc
Q psy14406 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCD---RRNCNKGVSPERMSH-DCPEC 237 (275)
Q Consensus 173 ~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~e~~~~~~~~~-~sp~~ 237 (275)
+..+.+.+.+|.++..+.+.++.....++.+.+..+......... .+||.||+.+.++.| +.|.=
T Consensus 268 ~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W 336 (381)
T PLN02988 268 ATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKW 336 (381)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcCCCCCCCC
Confidence 345667889999999999999999888999999999887766666 689999999999965 46643
|
|
| >PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=89.81 E-value=0.81 Score=43.09 Aligned_cols=74 Identities=19% Similarity=0.199 Sum_probs=56.8
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhccc---CCchHHhcccccccccc-CCcchhhHHHH
Q psy14406 171 AIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGC---DRRNCNKGVSPERMSHD-CPECLIGSIGV 244 (275)
Q Consensus 171 a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~e~~~~~~~~~~-sp~~~~v~~~~ 244 (275)
+.+.++.|.+.+|.++..+.+.++.....++++.+..+........ ..+||.||+.+.++.|. +|.=-.-+++.
T Consensus 299 a~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LIDKd~~P~W~p~sl~~ 376 (407)
T PLN02851 299 CKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVDKDFAPKWDPPSLGE 376 (407)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcCCCCCCCCCCCChhh
Confidence 3344467888999999999999999988899999999887766554 47899999999999554 66443333333
|
|
| >PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=88.49 E-value=1 Score=42.31 Aligned_cols=71 Identities=15% Similarity=0.168 Sum_probs=55.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccC---CchHHhccccccccc-cCCcchhhHHH
Q psy14406 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCD---RRNCNKGVSPERMSH-DCPECLIGSIG 243 (275)
Q Consensus 173 ~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~e~~~~~~~~~-~sp~~~~v~~~ 243 (275)
+..+.|.+.+|.++..+-+.+++....++++.+..+......... ++||.||+.+.++.| ++|.=..-+++
T Consensus 296 ~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~l~ 370 (401)
T PLN02157 296 TTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLE 370 (401)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHcCCCCCCCCCCCChh
Confidence 344668889999999999999998888999999998877666553 689999999999965 46644333333
|
|
| >KOG1684|consensus | Back alignment and domain information |
|---|
Probab=86.02 E-value=1.5 Score=40.33 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=56.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc-cCCc
Q psy14406 171 AIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH-DCPE 236 (275)
Q Consensus 171 a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~-~sp~ 236 (275)
|.+..+.|...+|.++..+-+.+......++++.+..+...........||.||+.+.++.+ +.|.
T Consensus 298 ak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~~~DF~EGvRA~LIDKd~~PK 364 (401)
T KOG1684|consen 298 AKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLMRGDFCEGVRAVLIDKDQNPK 364 (401)
T ss_pred HHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchhhhhhheeecCCcCCC
Confidence 44455778889999999999999999888999999999888888889999999999988874 4553
|
|
| >PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3 | Back alignment and domain information |
|---|
Probab=83.57 E-value=1.8 Score=39.15 Aligned_cols=74 Identities=27% Similarity=0.306 Sum_probs=46.0
Q ss_pred CHHHHHHHhhhCC---CceEEEEe-eCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy14406 1 EIGECFDSLSENE---ECRVIILS-AAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKP 76 (275)
Q Consensus 1 el~~~l~~~~~d~---~v~~vVl~-g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP 76 (275)
++..+|+.++..+ .+-+|||. |.| ++ -||-.| .. ..+.+++..+|.|
T Consensus 59 ~I~~al~~~~~~~~~~~~Dviii~RGGG-s~---eDL~~F---N~----------------------e~varai~~~~~P 109 (319)
T PF02601_consen 59 SIVSALRKANEMGQADDFDVIIIIRGGG-SI---EDLWAF---ND----------------------EEVARAIAASPIP 109 (319)
T ss_pred HHHHHHHHHHhccccccccEEEEecCCC-Ch---HHhccc---Ch----------------------HHHHHHHHhCCCC
Confidence 3667888887665 56677764 533 11 133222 11 3567889999999
Q ss_pred EEEEECchhchHHHHHHHHCCEEEEeCCc
Q psy14406 77 VISAVHGACIGGGMSLITAADIRYATKDA 105 (275)
Q Consensus 77 ~Ia~v~G~a~GgG~~lal~~D~rva~~~a 105 (275)
||++| ||-.-- .-.=+.+|+|..|+++
T Consensus 110 visaI-GHe~D~-ti~D~vAd~ra~TPta 136 (319)
T PF02601_consen 110 VISAI-GHETDF-TIADFVADLRAPTPTA 136 (319)
T ss_pred EEEec-CCCCCc-hHHHHHHHhhCCCHHH
Confidence 99998 444322 3344567788777764
|
1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 275 | ||||
| 2vre_A | 296 | Crystal Structure Of Human Peroxisomal Delta3,5, De | 9e-65 | ||
| 1dci_A | 275 | Dienoyl-Coa Isomerase Length = 275 | 1e-64 | ||
| 3kqf_A | 265 | 1.8 Angstrom Resolution Crystal Structure Of Enoyl- | 1e-21 | ||
| 3pea_A | 261 | Crystal Structure Of Enoyl-Coa Hydratase From Bacil | 3e-21 | ||
| 3sll_A | 290 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 7e-20 | ||
| 2hw5_A | 286 | The Crystal Structure Of Human Enoyl-Coenzyme A (Co | 9e-18 | ||
| 1mj3_A | 260 | Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata | 1e-17 | ||
| 1dub_A | 261 | 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph | 1e-17 | ||
| 1ey3_A | 258 | Structure Of Enoyl-Coa Hydratase Complexed With The | 2e-17 | ||
| 3trr_A | 256 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 8e-17 | ||
| 4f47_A | 278 | The Structure Of Enoyl-Coa Hydratase Echa19 From My | 1e-16 | ||
| 2pbp_A | 258 | Crystal Structure Of Enoyl-Coa Hydrates Subunit I ( | 4e-16 | ||
| 4fzw_A | 258 | Crystal Structure Of The Paaf-paag Hydratase-isomer | 5e-16 | ||
| 3hrx_A | 254 | Crystal Structure Of Phenylacetic Acid Degradation | 2e-15 | ||
| 3p5m_A | 255 | Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS | 2e-14 | ||
| 3hin_A | 275 | Crystal Structure Of Putative Enoyl-Coa Hydratase F | 2e-14 | ||
| 3ome_A | 282 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 4e-14 | ||
| 3tlf_A | 274 | Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS | 6e-14 | ||
| 3myb_A | 286 | Crystal Structure Of Enoyl-Coa Hydratase Mycobacter | 6e-14 | ||
| 2gtr_A | 261 | Human Chromodomain Y-Like Protein Length = 261 | 2e-13 | ||
| 3fdu_A | 266 | Crystal Structure Of A Putative Enoyl-Coa Hydratase | 2e-13 | ||
| 3rrv_A | 276 | Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS | 2e-13 | ||
| 1ef8_A | 261 | Crystal Structure Of Methylmalonyl Coa Decarboxylas | 3e-13 | ||
| 3rsi_A | 265 | The Structure Of A Putative Enoyl-Coa HydrataseISOM | 3e-13 | ||
| 1uiy_A | 253 | Crystal Structure Of Enoyl-Coa Hydratase From Therm | 1e-12 | ||
| 2fbm_A | 291 | Acetyltransferase Domain Of Cdy1 Length = 291 | 1e-12 | ||
| 4di1_A | 277 | Crystal Structure Of Enoyl-Coa Hydratase Echa17 Fro | 1e-11 | ||
| 2fw2_A | 260 | Catalytic Domain Of Cdy Length = 260 | 1e-11 | ||
| 3he2_A | 264 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 1e-11 | ||
| 3h81_A | 278 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 2e-11 | ||
| 3pzk_A | 257 | Crystal Structure Of The Mycobacterium Tuberculosis | 2e-11 | ||
| 3q0j_A | 258 | Crystal Structure Of The Mycobacterium Tuberculosis | 2e-11 | ||
| 3swx_A | 265 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 2e-11 | ||
| 3t3w_A | 279 | Crystal Structure Of Probable Enoyl-Coa Hydratase F | 3e-11 | ||
| 3moy_A | 263 | Crystal Structure Of Probable Enoyl-Coa Hydratase F | 4e-11 | ||
| 3r9s_A | 267 | Structure Of A Carnitinyl-Coa Dehydratase From Myco | 5e-11 | ||
| 3r9t_A | 267 | Structure Of Echa1_1 From Mycobacterium Paratubercu | 5e-11 | ||
| 1jxz_A | 269 | Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coe | 8e-11 | ||
| 2vss_F | 276 | Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C | 1e-10 | ||
| 2vss_E | 276 | Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C | 1e-10 | ||
| 2j5i_B | 276 | Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase | 1e-10 | ||
| 2j5i_A | 276 | Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase | 1e-10 | ||
| 2j5i_I | 276 | Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase | 2e-10 | ||
| 3r0o_A | 273 | Crystal Structure Of Carnitinyl-Coa Hydratase From | 2e-10 | ||
| 2vsu_E | 276 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 2e-10 | ||
| 2vsu_F | 276 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 2e-10 | ||
| 2vsu_A | 276 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 2e-10 | ||
| 2vsu_C | 275 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 3e-10 | ||
| 1nzy_A | 269 | 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo | 3e-10 | ||
| 1hzd_A | 272 | Crystal Structure Of Human Auh Protein, An Rna-Bind | 3e-10 | ||
| 1nzy_B | 269 | 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo | 3e-10 | ||
| 3qxz_A | 265 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 4e-10 | ||
| 3bpt_A | 363 | Crystal Structure Of Human Beta-Hydroxyisobutyryl-C | 4e-10 | ||
| 3lao_A | 258 | Crystal Structure Of Enoyl-Coa Hydratase From Pseud | 4e-10 | ||
| 3lke_A | 263 | Crystal Structure Of Enoyl-Coa Hydratase From Bacil | 5e-10 | ||
| 2vx2_A | 287 | Crystal Structure Of Human Enoyl Coenzyme A Hydrata | 9e-10 | ||
| 3i47_A | 268 | Crystal Structure Of Putative Enoyl Coa HydrataseIS | 9e-10 | ||
| 3qmj_A | 256 | Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 Fr | 1e-09 | ||
| 2ppy_A | 265 | Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) F | 4e-09 | ||
| 1wdk_A | 715 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 5e-09 | ||
| 2iex_A | 272 | Crystal Structure Of Dihydroxynapthoic Acid Synthet | 8e-09 | ||
| 4fzw_C | 274 | Crystal Structure Of The Paaf-paag Hydratase-isomer | 1e-08 | ||
| 3qka_A | 261 | Crystal Structure Of Enoyl-Coa Hydratase Echa5 From | 2e-08 | ||
| 3l3s_A | 263 | Crystal Structure Of An Enoyl-Coa HydrotaseISOMERAS | 2e-08 | ||
| 3qk8_A | 272 | Crystal Structure Of Enoyl-Coa Hydratase Echa15 Fro | 2e-08 | ||
| 3qxi_A | 265 | Crystal Structure Of Enoyl-Coa Hydratase Echa1 From | 2e-08 | ||
| 3oc7_A | 267 | Crystal Structure Of An Enoyl-Coa Hydratase From My | 7e-08 | ||
| 3qyr_A | 253 | Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M | 1e-07 | ||
| 3p85_A | 270 | Crystal Structure Enoyl-Coa Hydratase From Mycobact | 1e-07 | ||
| 2ej5_A | 257 | Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydr | 1e-07 | ||
| 3h02_A | 288 | 2.15 Angstrom Resolution Crystal Structure Of Napht | 3e-07 | ||
| 3t88_A | 289 | Crystal Structure Of Escherichia Coli Menb In Compl | 5e-07 | ||
| 4els_A | 285 | Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Co | 5e-07 | ||
| 3r9q_A | 262 | Structure Of A Probable Enoyl-Coa HydrataseISOMERAS | 1e-06 | ||
| 3q1t_A | 278 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 1e-06 | ||
| 3qre_A | 298 | Crystal Structure Of An Enoyl-Coa Hydratase Echa12_ | 2e-06 | ||
| 3pe8_A | 256 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 4e-06 | ||
| 3hp0_A | 267 | Crystal Structure Of A Putative Polyketide Biosynth | 6e-06 | ||
| 3isa_A | 254 | Crystal Structure Of Putative Enoyl-Coa HydrataseIS | 1e-05 | ||
| 2pg8_A | 417 | Crystal Structure Of R254k Mutanat Of Dpgc With Bou | 1e-05 | ||
| 4eml_A | 275 | Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoy | 1e-05 | ||
| 2np9_A | 440 | Crystal Structure Of A Dioxygenase In The Crotonase | 1e-05 | ||
| 3njb_A | 333 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 2e-05 | ||
| 2wtb_A | 725 | Arabidopsis Thaliana Multifuctional Protein, Mfp2 L | 2e-05 | ||
| 2j5g_A | 263 | The Native Structure Of A Beta-Diketone Hydrolase F | 2e-05 | ||
| 2f6q_A | 280 | The Crystal Structure Of Human Peroxisomal Delta3, | 2e-05 | ||
| 2j5g_D | 263 | The Native Structure Of A Beta-Diketone Hydrolase F | 3e-05 | ||
| 2uzf_A | 273 | Crystal Structure Of Staphylococcus Aureus 1,4-Dihy | 3e-05 | ||
| 1szo_A | 257 | Crystal Structure Analysis Of The 6-Oxo Camphor Hyd | 6e-05 | ||
| 1o8u_A | 257 | The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase | 8e-05 | ||
| 1q51_A | 314 | Crystal Structure Of Mycobacterium Tuberculosis Men | 1e-04 | ||
| 3t8a_A | 334 | Crystal Structure Of Mycobacterium Tuberculosis Men | 1e-04 | ||
| 1rjm_A | 339 | Crystal Structure Of Menb (rv0548c) From Mycobacter | 1e-04 | ||
| 2q35_A | 243 | Crystal Structure Of The Y82f Variant Of Ech2 Decar | 4e-04 | ||
| 3h0u_A | 289 | Crystal Structure Of A Putative Enoyl-Coa Hydratase | 4e-04 | ||
| 1hno_A | 280 | Crystal Structure Of Peroxisomal Delta3-delta2-enoy | 4e-04 | ||
| 3g64_A | 279 | Crystal Structure Of Putative Enoyl-Coa Hydratase F | 7e-04 |
| >pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296 | Back alignment and structure |
|
| >pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275 | Back alignment and structure |
|
| >pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265 | Back alignment and structure |
|
| >pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis Str. 'ames Ancestor' Length = 261 | Back alignment and structure |
|
| >pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290 | Back alignment and structure |
|
| >pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286 | Back alignment and structure |
|
| >pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260 | Back alignment and structure |
|
| >pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261 | Back alignment and structure |
|
| >pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258 | Back alignment and structure |
|
| >pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 256 | Back alignment and structure |
|
| >pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From Mycobacterium Marinum Length = 278 | Back alignment and structure |
|
| >pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I (Gk_2039) From Geobacillus Kaustophilus Hta426 Length = 258 | Back alignment and structure |
|
| >pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 258 | Back alignment and structure |
|
| >pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254 | Back alignment and structure |
|
| >pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255 | Back alignment and structure |
|
| >pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Rhodopseudomonas Palustris Cga009 Length = 275 | Back alignment and structure |
|
| >pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 282 | Back alignment and structure |
|
| >pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 274 | Back alignment and structure |
|
| >pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium Smegm Length = 286 | Back alignment and structure |
|
| >pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein Length = 261 | Back alignment and structure |
|
| >pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Acinetobacter Baumannii Length = 266 | Back alignment and structure |
|
| >pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 276 | Back alignment and structure |
|
| >pdb|1EF8|A Chain A, Crystal Structure Of Methylmalonyl Coa Decarboxylase Length = 261 | Back alignment and structure |
|
| >pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265 | Back alignment and structure |
|
| >pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus Thermophilus Hb8 Length = 253 | Back alignment and structure |
|
| >pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1 Length = 291 | Back alignment and structure |
|
| >pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From Mycobacterium Marinum Length = 277 | Back alignment and structure |
|
| >pdb|2FW2|A Chain A, Catalytic Domain Of Cdy Length = 260 | Back alignment and structure |
|
| >pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 264 | Back alignment and structure |
|
| >pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278 | Back alignment and structure |
|
| >pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257 | Back alignment and structure |
|
| >pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258 | Back alignment and structure |
|
| >pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265 | Back alignment and structure |
|
| >pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279 | Back alignment and structure |
|
| >pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycob Smegmatis Length = 263 | Back alignment and structure |
|
| >pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267 | Back alignment and structure |
|
| >pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267 | Back alignment and structure |
|
| >pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A (Product) Length = 269 | Back alignment and structure |
|
| >pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276 | Back alignment and structure |
|
| >pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276 | Back alignment and structure |
|
| >pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276 | Back alignment and structure |
|
| >pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276 | Back alignment and structure |
|
| >pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276 | Back alignment and structure |
|
| >pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273 | Back alignment and structure |
|
| >pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276 | Back alignment and structure |
|
| >pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276 | Back alignment and structure |
|
| >pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism. Length = 276 | Back alignment and structure |
|
| >pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 275 | Back alignment and structure |
|
| >pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269 | Back alignment and structure |
|
| >pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding Homologue Of Enoyl-Coa Hydratase Length = 272 | Back alignment and structure |
|
| >pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269 | Back alignment and structure |
|
| >pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265 | Back alignment and structure |
|
| >pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363 | Back alignment and structure |
|
| >pdb|3LAO|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas Aeruginosa Pa01 Length = 258 | Back alignment and structure |
|
| >pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Halodurans Length = 263 | Back alignment and structure |
|
| >pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase Domain-Containing Protein 3 (Echdc3) Length = 287 | Back alignment and structure |
|
| >pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 Length = 268 | Back alignment and structure |
|
| >pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From Mycobacterium Marinum Length = 256 | Back alignment and structure |
|
| >pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From Geobacillus Kaustophilus Hta426 Length = 265 | Back alignment and structure |
|
| >pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 715 | Back alignment and structure |
|
| >pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272 | Back alignment and structure |
|
| >pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 274 | Back alignment and structure |
|
| >pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261 | Back alignment and structure |
|
| >pdb|3L3S|A Chain A, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE FAMILY Protein From Silicibacter Pomeroyi Length = 263 | Back alignment and structure |
|
| >pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From Mycobacterium Marinum In Complex With An Unknown Ligand Length = 272 | Back alignment and structure |
|
| >pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From Mycobacterium Marinum Length = 265 | Back alignment and structure |
|
| >pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From Mycobacterium Avium Length = 267 | Back alignment and structure |
|
| >pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270 | Back alignment and structure |
|
| >pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase Subunit Ii) From Geobacillus Kaustophilus Length = 257 | Back alignment and structure |
|
| >pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate Synthase From Salmonella Typhimurium. Length = 288 | Back alignment and structure |
|
| >pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 289 | Back alignment and structure |
|
| >pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme A Synthases (Menb) In Complex With Bicarbonate Length = 285 | Back alignment and structure |
|
| >pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 262 | Back alignment and structure |
|
| >pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Avium Length = 278 | Back alignment and structure |
|
| >pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From Mycobacterium Marinum Length = 298 | Back alignment and structure |
|
| >pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 256 | Back alignment and structure |
|
| >pdb|3HP0|A Chain A, Crystal Structure Of A Putative Polyketide Biosynthesis Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis Length = 267 | Back alignment and structure |
|
| >pdb|3ISA|A Chain A, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE FROM Bordetella Parapertussis Length = 254 | Back alignment and structure |
|
| >pdb|2PG8|A Chain A, Crystal Structure Of R254k Mutanat Of Dpgc With Bound Substrate Analog Length = 417 | Back alignment and structure |
|
| >pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In Complex With Bicarbonate Length = 275 | Back alignment and structure |
|
| >pdb|2NP9|A Chain A, Crystal Structure Of A Dioxygenase In The Crotonase Superfamily Length = 440 | Back alignment and structure |
|
| >pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis, Iodide Soak Length = 333 | Back alignment and structure |
|
| >pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2 Length = 725 | Back alignment and structure |
|
| >pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The Cyanobacterium Anabaena Sp. Pcc 7120 Length = 263 | Back alignment and structure |
|
| >pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2 Enoyl Coa Isomerase (Peci) Length = 280 | Back alignment and structure |
|
| >pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The Cyanobacterium Anabaena Sp. Pcc 7120 Length = 263 | Back alignment and structure |
|
| >pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273 | Back alignment and structure |
|
| >pdb|1SZO|A Chain A, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase His122ala Mutant Bound To Its Natural Product (2s,4s)- Alpha-Campholinic Acid Length = 257 | Back alignment and structure |
|
| >pdb|1O8U|A Chain A, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New Structural Diversity In The Crotonase Superfamily Length = 257 | Back alignment and structure |
|
| >pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In Vitamin K2 Biosynthesis Length = 314 | Back alignment and structure |
|
| >pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 334 | Back alignment and structure |
|
| >pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium Tuberculosis Length = 339 | Back alignment and structure |
|
| >pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2 Decarboxylase Domain Of Curf From Lyngbya Majuscula Length = 243 | Back alignment and structure |
|
| >pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From Streptomyces Avermitilis Length = 289 | Back alignment and structure |
|
| >pdb|1HNO|A Chain A, Crystal Structure Of Peroxisomal Delta3-delta2-enoyl-coa Isomerase From Saccharomyces Cerevisiae Length = 280 | Back alignment and structure |
|
| >pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) Length = 279 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275 | Back alignment and structure |
|---|
Score = 299 bits (769), Expect = e-103
Identities = 114/208 (54%), Positives = 160/208 (76%), Gaps = 1/208 (0%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S + +DVAR + LR LI
Sbjct: 35 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQ-PPGDDVARIAWYLRDLI 93
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ YQK+ + +E+CPKPVI+A+HG CIGGG+ LI+A DIRY T+DA+F +KEVD+GL ADV
Sbjct: 94 SRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADV 153
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP++IGN+SLVNE+ FTARK+ A EA + GLVS+++ DK+ +L A L I+S
Sbjct: 154 GTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISS 213
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSPVAVQG+K L++SRDH+V+E L+ +
Sbjct: 214 KSPVAVQGSKINLIYSRDHSVDESLDYM 241
|
| >3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 3e-57
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGK-IFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
+ E + + IIL + + F++G L +L + ++ LR++
Sbjct: 35 SLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVR--------LREV 86
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ + + PK ++ ++G GGG +++ A D R A + A F +G++ D
Sbjct: 87 LHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPD 146
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
+GA LPRIIG + + + EA GL+ ++ ++K+ L + ++
Sbjct: 147 LGASYFLPRIIG-YEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVS 205
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
A+ TKK L +++ L
Sbjct: 206 EGYVPAIAATKKLLKGKAAEELKQQL 231
|
| >3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 6e-55
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 8/206 (3%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ +S + + R ++++ AGK F +G D + + I + +
Sbjct: 55 PFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPI-----PHIGGLTQPTIALRSM 109
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-D 119
+ I +L R +PVI+A++GA IGGG+ L A D+R A++DA+F ++ GLTA +
Sbjct: 110 ELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASE 169
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
+G LPR IG S ++I T R ++A EA GLVS+ ESLL +GE IA
Sbjct: 170 LGLSYLLPRAIG-TSRASDIMLTGRDVDADEAERIGLVSRKVAS-ESLLEECYAIGERIA 227
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
S ++ TK+T+ D A E
Sbjct: 228 GFSRPGIELTKRTIWSGLDAASLESH 253
|
| >3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 1e-54
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 11/206 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ + LS R ++L+ G+ F +G D+ ++ + L
Sbjct: 48 DLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTAR--------LLDFN 99
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT-AD 119
+ + ++ CP PVI+A+HG G G L AAD R A F +GL+ D
Sbjct: 100 RMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGD 159
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
+GA LPR++G + + A EA GL+S+L ++ A L +A
Sbjct: 160 MGAAYLLPRVVG-LGHATRLLMLGDTVRAPEAERIGLISELTEE-GRADEAARTLARRLA 217
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
+A TK L D + +
Sbjct: 218 DGPALAHAQTKALLTAELDMPLAAAV 243
|
| >2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 3e-54
Identities = 41/205 (20%), Positives = 82/205 (40%), Gaps = 19/205 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ CF +++N++ +V+IL+ G F++G ++ + E D++
Sbjct: 34 GLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDLSGL-------- 85
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ C P+I+A+ G GGG+ L AD ++++ + + G T
Sbjct: 86 ---------ILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVG 136
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
L +G L E+ +T E E G+ + + +L A +LG+ IA
Sbjct: 137 ATSLILREKLG-SELAQEMIYTGENYRGKELAERGIPFPVVSR-QDVLNYAQQLGQKIAK 194
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+++ K+ L E +
Sbjct: 195 SPRLSLVALKQHLSADIKAKFPEAI 219
|
| >3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 5e-54
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + L+++ R +++ AG+ F+AG D + L + + R
Sbjct: 59 GLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKTIRD-------- 110
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
++ + + RC PV++AV+G +G G SL+ +DI Y ++A+ V +GL A
Sbjct: 111 --GREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAAD 168
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G P I L E A T +I A A E GL + + DD +A AI + I
Sbjct: 169 GGPLTWPLHIS-LLLAKEYALTGTRISAQRAVELGLANHVADD---PVAEAIACAKKILE 224
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
AV+ TK+ L + AV L
Sbjct: 225 LPQQAVESTKRVLNIHLERAVLASL 249
|
| >1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 5e-54
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 9/205 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + E++ ++++ A F AG L + + VA R
Sbjct: 34 EVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI-------PLDKGVAGVRDHFRIAA 86
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + I + R +PV++A++G GGG+ + A+D+ A F IG+ D
Sbjct: 87 LWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDT 146
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
L RI+G E+ T R + EA++ GLVS++Y + A ++ +A+
Sbjct: 147 ATSYSLARIVG-MRRAMELMLTNRTLYPEEAKDWGLVSRVYPK-DEFREVAWKVARELAA 204
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
K+ VEE
Sbjct: 205 APTHLQVMAKERFHAGWMQPVEECT 229
|
| >2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 8e-54
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++ ++++LSA G +F GLD + + ++E K+
Sbjct: 37 EVQSALSTA-AADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRES--------TKMA 87
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ +++ + KP+I AV+G IG G S++ D+ +A + AWF G + D
Sbjct: 88 EAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDG 147
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ P+I+G + NE+ + RK+ A EA GLVS+++ + + + +AS
Sbjct: 148 CSTVMFPKIMG-GASANEMLLSGRKLTAQEACGKGLVSQVFWP-GTFTQEVMVRIKELAS 205
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+PV ++ +K + + +E+
Sbjct: 206 CNPVVLEESKALVRCNMKMELEQAN 230
|
| >2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 9e-54
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + R ++++ AG+ F AG DLSG+ + L
Sbjct: 34 EVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGV-------------TEEMDHGDVLR 80
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ Y + +L KPV++AV+GA G GMSL A D R ++ A F + +GL D
Sbjct: 81 SRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDA 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G L LPR++G ++ E+A K+ A EA GL +K+ + E +++
Sbjct: 141 GHLYYLPRLVG-RAKALELAVLGEKVTAEEAAALGLATKVIPL-SDWEEEVKQFAERLSA 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
A+ K+ L S + + L
Sbjct: 199 MPTKAIGLIKRLLRESEETTFDRYL 223
|
| >2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 1e-53
Identities = 45/205 (21%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI +S + ++ ++++ SAAG +F GLD + + +++
Sbjct: 55 EIVNALNSAAADD-SKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTAS--------LEMV 105
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T + +++ + KP++ +V+G IG G S++ D+ +A + AWF G + D
Sbjct: 106 DTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDG 165
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ P+++G ++ NE+ RK+ A EA GLVS+++ + + + +AS
Sbjct: 166 CSSITFPKMMG-KASANEMLIAGRKLTAREACAKGLVSQVFLT-GTFTQEVMIQIKELAS 223
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+P+ ++ K + + +E+
Sbjct: 224 YNPIVLEECKALVRCNIKLELEQAN 248
|
| >1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 2e-53
Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 16/213 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + L E R ++L G +F+AG + + V +
Sbjct: 41 GLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWE-------- 92
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + P+PV++AV +G G++L AADI K + +G+ A
Sbjct: 93 --ARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGD 150
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
A+ P ++G + + EA GLV+ +D E + A+E+ E +A
Sbjct: 151 HAVLLWPLLVG-MAKAKYHLLLNEPLTGEEAERLGLVALAVED-EKVYEKALEVAERLAQ 208
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESK 213
A+ TK L +H L +
Sbjct: 209 GPKEALHHTKHAL----NHWYRSFLPHFELSLA 237
|
| >3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 2e-53
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 12/193 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ + + + + + RV+++ GK F++G + + + + R+
Sbjct: 44 DLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMRE-------- 95
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + +L KPV+SA+ G +G G+ + ADI A+ A +G+ A
Sbjct: 96 --ARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGD 153
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
A P ++G + T + EA GLVS DD + +L A L E +A
Sbjct: 154 HAAICWPLLVG-MAKAKYYLLTCETLSGEEAERIGLVSTCVDD-DEVLPTATRLAENLAQ 211
Query: 181 KSPVAVQGTKKTL 193
+ A++ TK++L
Sbjct: 212 GAQNAIRWTKRSL 224
|
| >3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 2e-52
Identities = 45/205 (21%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ +++ + V++L+ +G+ F+AG DL+ M + + E
Sbjct: 37 ATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEG-----------K 85
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
++ I +L PKP+I AV+G +G G +++ AD+ + + A +G+ +
Sbjct: 86 FGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEA 145
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ LP+++G + + ++ I+A EA GLV ++ E LL A E++A+
Sbjct: 146 ASSYLLPQLVG-RQNAAWLLMSSEWIDAEEALRMGLVWRICSP-EELLPEARRHAEILAA 203
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
K ++ K T+V +
Sbjct: 204 KPISSLMAVKHTMVEPNRAQIAAAS 228
|
| >3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 3e-52
Identities = 52/205 (25%), Positives = 81/205 (39%), Gaps = 13/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + R +L G +FTAGLDL+ + + Q A +
Sbjct: 40 ELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDG- 98
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KP++ AVHG + G+ L AADI A + A F EV+ G+
Sbjct: 99 ----------RQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFG 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA R PR G TA +A EA G+V ++ + AI + + IA
Sbjct: 149 GATIRFPRTAG-WGNAMRWMLTADTFDAVEAHRIGIVQEIVPV-GEHVDTAIAIAQTIAR 206
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
++P+ VQ T + +
Sbjct: 207 QAPLGVQATLRNARLAVREGDAAAE 231
|
| >3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 4e-52
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
I + D +N++ RV++L A FTAG D+ + Q
Sbjct: 36 WIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVP-------- 87
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ S R KP+I AV G IG G++++ AD+ +A A F + V +GL+ +
Sbjct: 88 --PFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEG 145
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA Q L + G E+ FTA+K A A + GLV+++ +D A A + + +
Sbjct: 146 GASQLLVKQAG-YHKAAELLFTAKKFNAETALQAGLVNEIVED---AYATAQATAQHLTA 201
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESK 213
+++ TK + H +++ + +D E++
Sbjct: 202 LPLASLKQTKALM----KHDLDQIIECIDHEAE 230
|
| >3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 4e-52
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ +E R ++L+ AG+ F +G DL+G + G
Sbjct: 37 ELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAG------------------AA 78
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + ++ PKPVI+ VHGA +G G SL A D+ A ++F L +GL D
Sbjct: 79 DAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDG 138
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA LP +IG ++ + +A TA KI AA A E G++S + + + ++ ++
Sbjct: 139 GASALLPLLIG-RARTSRMAMTAEKISAATAFEWGMISHITSA-DEYESVLTDVLRSVSG 196
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+A TK+ L + +E
Sbjct: 197 GPTLAFGWTKRALAAATLAELEPVQ 221
|
| >1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 5e-52
Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 8/213 (3%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE + N + I+ ++G+ F++G D G+ + + + SK + +
Sbjct: 40 YLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYP-SETSKWVSNFV 98
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTAD 119
+ + K +I ++G IG +L+ DI Y+ D + ++GL +
Sbjct: 99 ARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITE 158
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLL-----AGAIEL 174
G LP G + E + + E G +SK ++ S EL
Sbjct: 159 GGTTVSLPLKFG-TNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEEL 217
Query: 175 GELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
E + + G KK L + A + +
Sbjct: 218 REKVKGLYLPSCLGMKKLLKSNHIDAFNKANSV 250
|
| >2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 7e-52
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 15/206 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E + F +S + + RV+IL+ +G + A +D + + K
Sbjct: 55 EFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPRE-----------WDKTY 103
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFT-LKEVDIGLTAD 119
+K + +L PVISAV+GA + I DI A+++ F + ++ G+
Sbjct: 104 WEGKKVLQNLLDIEVPVISAVNGAALLHS-EYILTTDIILASENTVFQDMPHLNAGIVPG 162
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G P +G FT K+ A +A E +V ++ L+ A E+ +A
Sbjct: 163 DGVHILWPLALG-LYRGRYFLFTQEKLTAQQAYELNVVHEVLPQ-SKLMERAWEIARTLA 220
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ + ++ T+ L V EG+
Sbjct: 221 KQPTLNLRYTRVALTQRLKRLVNEGI 246
|
| >4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 2e-51
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ E +D + + + R IL+ AG F AG+DL + ++
Sbjct: 51 IMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDG---------SYD 101
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ ++ R KP+I+AV G I GG ++ DIR A + A F + E L
Sbjct: 102 PSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMG 161
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G+ RL R I ++ ++ T R I AAEA+E GLV + D L A+E+ E+IA+
Sbjct: 162 GSAVRLVRQIP-YTVACDLLLTGRHITAAEAKEMGLVGHVVPD-GQALTKALEIAEIIAA 219
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P+AVQ +T+ + E
Sbjct: 220 NGPLAVQAILRTIRETEGMHENEAF 244
|
| >3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 2e-51
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 12/205 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ + S + RV++L+ G F AG DLS S G + + +++ + L+
Sbjct: 42 QLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALM 101
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ PVI+A+ G GG L+ A DI A + F L E IG+ +
Sbjct: 102 RA-------IVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAI 154
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+L LP++ + T K +A A E GL++ +D L A +L +
Sbjct: 155 ISLTLLPKLSARAAA--RYYLTGEKFDARRAEEIGLITMAAED---LDAAIDQLVTDVGR 209
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
SP + +K + +
Sbjct: 210 GSPQGLAASKALTTAAVLERFDRDA 234
|
| >3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298 | Back alignment and structure |
|---|
Score = 169 bits (429), Expect = 3e-51
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
D + RVI+L+ G+ F AG L A + K+K
Sbjct: 61 GFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSA----DAAAGYDKTMAKAKDANLAD 116
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
++ + KPVI+A++G C+G G++ D+R+A A F GL A+
Sbjct: 117 LVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEF 176
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LPR+ ++ ++ + R A EA + GLV ++ E L+ A+E E IA
Sbjct: 177 GISWILPRLTS-WAVALDLLLSGRTFLAEEAAQLGLVKEVVTP-EQLMPRALEYAEDIAR 234
Query: 181 K-SPVAVQGTKKTLVFSRDHAVEEGL 205
SP ++ K+ + V E
Sbjct: 235 YCSPSSMAVIKRQVYGDATRDVVEAT 260
|
| >1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 3e-51
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 16/206 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ CF ++ + E +V+IL+ G F +D + ++I
Sbjct: 47 ELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDW------------DEII 94
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWF-TLKEVDIGLTAD 119
Q+ +++L PVI+AV+G + +DI A + A F G+
Sbjct: 95 FEGQRLLNNLLSIEVPVIAAVNGPV-TNAPEIPVMSDIVLAAESATFQDGPHFPSGIVPG 153
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
GA P ++G + T ++++A A + G V+++ + + LL A EL IA
Sbjct: 154 DGAHVVWPHVLG-SNRGRYFLLTGQELDARTALDYGAVNEVLSE-QELLPRAWELARGIA 211
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
K +A + +K L +E L
Sbjct: 212 EKPLLARRYARKVLTRQLRRVMEADL 237
|
| >1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 5e-51
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + D L + R ++L+ GK F+AG DL+ + + + AE+ +
Sbjct: 30 SLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEEN---------YRHS 80
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + PKP ++AV+G + GG L A D+ ++A EV IG A +
Sbjct: 81 LSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAAL 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ L R +G + ++ T R +EA EA+ GLV+++ L A L E +A
Sbjct: 141 VS-VILVRAVG-EKAAKDLLLTGRLVEAREAKALGLVNRIAPP-GKALEEAKALAEEVAK 197
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+P +++ TK+ L+ +E+G
Sbjct: 198 NAPTSLRLTKELLLALPGMGLEDGF 222
|
| >3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 1e-50
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ +D + ++ R IL+ AG + G DLS + A D A
Sbjct: 40 QFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWMVRDGSAPPLDPAT--------- 90
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
K + KP+I+AV+GAC+GGG ++ DIR + + A F L EV GL
Sbjct: 91 --IGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGA 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G++ RL R I + E+ T + A EA GLV + + L A L + I
Sbjct: 149 GSMVRLKRQIP-YTKAMEMILTGEPLTAFEAYHFGLVGHVVPA-GTALDKARSLADRIVR 206
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P+AV+ K+ +V S A E+
Sbjct: 207 NGPLAVRNAKEAIVRSGWLAEEDAR 231
|
| >2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 1e-50
Identities = 38/207 (18%), Positives = 87/207 (42%), Gaps = 11/207 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI + S+++ + +L+ G +++G DL+ + E++ +
Sbjct: 57 EIMRALKAASKDDS-IITVLTGNGDYYSSGNDLTNFTDIPPGGVEEK--------AKNNA 107
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
++ + PKP+I+ V+G +G ++L+ D YA+ A F +G + +
Sbjct: 108 VLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEG 167
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ P+I+ + E+ +K+ A EA GLV++++ D + + A
Sbjct: 168 CSSYTFPKIMS-PAKATEMLIFGKKLTAGEACAQGLVTEVFPD-STFQKEVWTRLKAFAK 225
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
P A++ +K+ + + +
Sbjct: 226 LPPNALRISKEVIRKREREKLHAVNAE 252
|
| >3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 4e-50
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + D L + V IL+ AG F AG+DL + E +
Sbjct: 46 ALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEGRGLGFT-------- 97
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
KP+I+AV G + GG L A D+ A +D+ F + EV GL A
Sbjct: 98 ---------ERPPAKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGG 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G L RLP I ++ E+A T + A A G+V+ L + + L AI L E I +
Sbjct: 149 GGLLRLPERIP-YAIAMELALTGDNLSAERAHALGMVNVLAEP-GAALDAAIALAEKITA 206
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P+AV TK+ + SR +++
Sbjct: 207 NGPLAVAATKRIITESRGWSLDTRF 231
|
| >3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 5e-50
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 9/205 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + ++ V+++ G+IF AG DL + + E + L
Sbjct: 37 ALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRA------FVTDLF 90
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ L CPKP I+ V G G+ L+ A D+ YA+ A F L V G
Sbjct: 91 EACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFCTT 150
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
A+ + R+IG + V E+A T +A A GL++++ + L +L +A+
Sbjct: 151 PAV-AVSRVIG-RRAVTEMALTGATYDADWALAAGLINRILPEAA-LATHVADLAGALAA 207
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
++ ++ +TL + +E+
Sbjct: 208 RNQAPLRRGLETLNRHLELPLEQAY 232
|
| >3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 1e-49
Identities = 43/206 (20%), Positives = 77/206 (37%), Gaps = 15/206 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ E D+ + + ++++ ++F+ G DL + S + A ++
Sbjct: 35 ALNEAIDAA-DRDNVGALVIAGNHRVFSGGFDLKVLTSGEAKPA------------IDML 81
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ L PKPV+ A G I G L+ + D R A EV IG+T
Sbjct: 82 RGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPY 141
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
A++ L + S + A A+ A G + ++ E +L+ A E A
Sbjct: 142 AAMEVLKLRLT-PSAYQQAAGLAKTFFGETALAAGFIDEISLP-EVVLSRAEEAAREFAG 199
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLN 206
+ A TK A+ G++
Sbjct: 200 LNQQAHNATKLRARAEALKAIRAGID 225
|
| >3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 1e-49
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ DS + RVI+L A GK F+AG DL+ M S+ +E+ S +L L+
Sbjct: 35 EMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMAN--FTEEENLEDSLVLGNLM 92
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + PKP I+ V GA GGG L A DI A+ A F EV +GL V
Sbjct: 93 YS-------ISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAV 145
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ + R IG + + +A +A A LV D ++LL ++ I++
Sbjct: 146 IS-PYVVRAIG-ERAAKMLFMSAEVFDATRAYSLNLVQHCVPD-DTLLEFTLKYASQISN 202
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
+P AV+ +K+ + + ++E L +
Sbjct: 203 NAPEAVKNSKQLAQYVANKKIDEELVR 229
|
| >3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 2e-49
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 10/207 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++ +++++ G+ F +G D+ + G+ I E+ ++
Sbjct: 42 ELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYLST-----YDQW 96
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q+ KPV++AV+G C G GM +T DI A++ A F V IGL A
Sbjct: 97 EAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVAG- 155
Query: 121 GALQRLPRIIGNQSLVNEIAFTARK--IEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
L R+ R++ +S+ +A + + A A E GL+S++ + + LL A E+ +++
Sbjct: 156 RELVRVSRVLP-RSIALRMALMGKHERMSAQRAYELGLISEIVEH-DRLLERAHEIADIV 213
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGL 205
S +P+AV+GT+ ++ + + E
Sbjct: 214 NSNAPLAVRGTRLAILKGLNVPLHEAE 240
|
| >3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 2e-49
Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 13/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ +EE R +L A G+ FTAGLDL + A ++
Sbjct: 43 DLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPK--LAASGFRYPDGGVDPWGVV 100
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
R KP++ AV G C G+ L+ ADI A + F EV G+
Sbjct: 101 QP---------RRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLG 151
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G+ R PR G + T + +A EA L++++ + LA A+E E IA
Sbjct: 152 GSTVRFPRAAG-WTDAMRYILTGDEFDADEALRMRLLTEVVEP-GEELARALEYAERIAR 209
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+P+AV+ ++ RD + L
Sbjct: 210 AAPLAVRAALQSAFQGRDEGDDAAL 234
|
| >3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 3e-49
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++G + L ++ RVI+L+ A F +G +S A R
Sbjct: 38 QLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAA-------------AETFAAPRNPD 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + PVI+AV+G IG GM+L ADIR ++ + + +V G+ D
Sbjct: 85 FSASPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDA 144
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
A LPR++G ++ E+ T A A E GL ++ +L A+ + IA+
Sbjct: 145 LAHWTLPRLVG-TAVAAELLLTGASFSAQRAVETGLANRCLPA-GKVLGAALRMAHDIAT 202
Query: 181 K-SPVAVQGTKKTLV--FSRDHAVEEGL 205
+P + TK+ L + E
Sbjct: 203 NVAPESAALTKRLLWDAQMTGMSAAEVA 230
|
| >3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 1e-48
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ D L + + V I++ AG F AG+DL +S ++E+
Sbjct: 38 GLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSERGLGFTN-------- 89
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
KP+I+AV G + GG L+ + D+ A + A F + EV GL A
Sbjct: 90 ----------VPPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGA 139
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G L RLP I + E+A T A +A + G +++L DD L A+EL I +
Sbjct: 140 GGLLRLPNRIP-YQVAMELALTGESFTAEDAAKYGFINRLVDD-GQALDTALELAAKITA 197
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P+AV TK+ ++ S A EE
Sbjct: 198 NGPLAVAATKRIIIESASWAPEEAF 222
|
| >2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 1e-48
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 9/211 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++L ++ V++L+ AG+ +TAG+DL + + KI R+
Sbjct: 40 EMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEY----FREVDAGPEILQEKIRREAS 95
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
K + KP I+ V+G C GGG S + A D+ +A F L E++ G+
Sbjct: 96 QWQWKLL---RMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGN 152
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ + +G T + +A E GLV++ L IEL +
Sbjct: 153 LVSKAMADTVG-HRQSLMYIMTGKTFGGQKAAEMGLVNESVPL-AQLREVTIELARNLLE 210
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211
K+PV ++ K R+ E+ + + +
Sbjct: 211 KNPVVLRAAKHGFKRCRELTWEQNEDYLYAK 241
|
| >3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 3e-48
Identities = 45/205 (21%), Positives = 76/205 (37%), Gaps = 18/205 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + D+ E+ +++ + AG+ F+AG D + + +E + + R +I
Sbjct: 38 ALIDGVDAA-HREQVPLLVFAGAGRNFSAGFDFTDY----ETQSEGDLLLRMVRI----- 87
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + P ++ HG G G+ L A RY T +A F + + GL V
Sbjct: 88 ---EMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGL---V 141
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+R I+G I +AR +A EAR G V A E +
Sbjct: 142 LGTRRFRDIVG-ADQALSILGSARAFDADEARRIGFVRDCAAQ-AQWPALIDAAAEAATA 199
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P + L D A L
Sbjct: 200 LDPATRATLHRVLRDDHDDADLAAL 224
|
| >3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 5e-48
Identities = 46/223 (20%), Positives = 76/223 (34%), Gaps = 23/223 (10%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLG------------------QE 42
E+ + + + VI++S G+ F AG DLS Q
Sbjct: 66 ELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQA 125
Query: 43 IAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYAT 102
+ D + ++++ + + +SL C KP + +HG C+ GG + AD A
Sbjct: 126 LNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAA 185
Query: 103 KDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYD 162
DA + + G +G + FT I A+A E GL + D
Sbjct: 186 ADAKIGYPPMRVWGVPAAG---LWAHRLG-DQRAKRLLFTGDCITGAQAAEWGLAVEAPD 241
Query: 163 DKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
L A L E IA+ + K + +
Sbjct: 242 P-ADLDARTERLVERIAAMPVNQLIMAKLACNTALLNQGVATS 283
|
| >3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 8e-48
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 23/205 (11%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+++ V+I++ A +F AGLDL + + E D++ K
Sbjct: 40 TFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKEL----GDTTELPDISPK-------- 87
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
KPVI A++GA + GG+ L DI A+++A F +GL
Sbjct: 88 ---------WPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTW 138
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G RLP+ +G L ++ T + A +A GLV+++ + LL A + I
Sbjct: 139 GLSVRLPQKVG-VGLARRMSLTGDYLSAQDALRAGLVTEVVAH-DDLLTAARRVAASIVG 196
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+ AV+ + L
Sbjct: 197 NNQKAVRALLDSYHRIDALQTGGAL 221
|
| >3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 2e-47
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 26/205 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + R I+L+ G F AG DLSG A D +
Sbjct: 52 ELTQAIRKA-GDGSARAIVLTGQGTAFCAGADLSGD-------AFAADYPDR-------- 95
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ +++ P PV+ A++G IG G+ L D+R DA+F GL D
Sbjct: 96 --LIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDN 153
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+++RL ++G + +A K+ A A G+ +++ + A IA
Sbjct: 154 WSIRRLSSLVG-HGRARAMLLSAEKLTAEIALHTGMANRIGTLAD-----AQAWAAEIAR 207
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+P+A+Q K+ L + D A+EE
Sbjct: 208 LAPLAIQHAKRVL--NDDGAIEEAW 230
|
| >3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 2e-47
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 13/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ E D + +++ RV+++ G+ F+AG D+ S+ ++K +L
Sbjct: 36 DVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVT-----------EAKQATELA 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q + +E+C KPVI+A+HGA +GGG+ + +R+AT+ A L E+ +GL
Sbjct: 85 QLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGF 144
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
QRLPR +G ++ E+ T+ I AEA + GLV+ ++ + E+ L +++ + IA
Sbjct: 145 AGTQRLPRYVG-KAKACEMMLTSTPITGAEALKWGLVNGVFAE-ETFLDDTLKVAKQIAG 202
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
KSP + + L ++ EG+
Sbjct: 203 KSPATARAVLELLQTTKSSHYYEGV 227
|
| >3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 2e-47
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
+G+ + + E R ++L+ AG K F AG DL + AR+ +
Sbjct: 40 GVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAI-------------ARRENLYHPD 86
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ + KP I+AV+G +GGG L A+D+ A + A F L EV GL A
Sbjct: 87 HPEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAA 146
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + R+ + + + + T + AA AR+ GL++++ + S+L A+ L I
Sbjct: 147 AGGVFRIAEQLP-RKVAMRLLLTGEPLSAAAARDWGLINEVVEA-GSVLDAALALASAIT 204
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211
+P++VQ +K+ + V++G+ D+
Sbjct: 205 VNAPLSVQASKRIA-----YGVDDGVVVGDEP 231
|
| >3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-46
Identities = 50/205 (24%), Positives = 76/205 (37%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ F + E V +L F AG DL M +
Sbjct: 42 ALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHG------------ 89
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
S R KPVI+A+ G + GG+ L D+R +DA + G+
Sbjct: 90 --PGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLID 147
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G RLPR+IG S ++ T R + A EA + GLV+++ + A L IA+
Sbjct: 148 GGTIRLPRLIG-HSRAMDLILTGRPVHANEALDIGLVNRVVARGQ-AREAAETLAAEIAA 205
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
V+ + + + A E L
Sbjct: 206 FPQQCVRADRDSAIAQWGMAEEAAL 230
|
| >3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-46
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ +C + ++ R +++ G F+AGLDLS +
Sbjct: 47 ALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDATEG------------LVHS 92
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T+ + ++ C PVI+A+ GA IGGG+ L AA IR A A++ L E G+
Sbjct: 93 QTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGG 152
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G RLPR+IG + + ++ T R AAE G L ++ S A+ELG +A
Sbjct: 153 GGSVRLPRLIG-VARMADMMLTGRVYSAAEGVVHGFSQYLIEN-GSAYDKALELGNRVAQ 210
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+P+ + L + + GL
Sbjct: 211 NAPLTNFAVLQALPMIAEANPQTGL 235
|
| >2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 5e-46
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI ++ NE+ RVI+L+ G+ F AG D+ M E +
Sbjct: 36 EIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLN------------ 83
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
L P+I+AV+G +GGG L + D+ A+ A F EV++G+
Sbjct: 84 --QFADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGA 141
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL ++IG E +T ++ A EA + G+V+++ E L+ + L +A
Sbjct: 142 GGTQRLTKLIG-PKRALEWLWTGARMSAKEAEQLGIVNRVVSP-ELLMEETMRLAGRLAE 199
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+ P+A++ K+ + + D+ + EG+
Sbjct: 200 QPPLALRLIKEAVQKAVDYPLYEGM 224
|
| >2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 6e-46
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 15/206 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
+ + + ++ R +++ + F+AG D + + L +S+ + +
Sbjct: 31 SVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLS-----------RSEDIEEW 79
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
I ++ KP I+AV G IG G D R A F + E+ G+
Sbjct: 80 IDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCS 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
VGA L G S + EI + + ++A + LV+++ + +LL AI ++A
Sbjct: 140 VGA-AILGFTHG-FSTMQEIIYQCQSLDAPRCVDYRLVNQVVES-SALLDAAITQAHVMA 196
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
S A TK+ + H +E+
Sbjct: 197 SYPASAFINTKRAVNKPFIHLLEQTR 222
|
| >3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 9e-46
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + +E+ + VI+L A GK F+AG DL G + ++ + +
Sbjct: 51 ELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGG----GPVPDKLTLEFIYAHESRRY 106
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Y PKP I+AV G CI GG+ L D+ A +DA F+ V + +
Sbjct: 107 LEYSLRW---RNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGG-- 161
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+G EI FT R + A E + G+V+++ + L A L IA
Sbjct: 162 VEYHGHTWELG-PRKAKEILFTGRAMTAEEVAQTGMVNRVVPR-DRLDAETRALAGEIAK 219
Query: 181 KSPVAVQGTKK 191
P A++ K+
Sbjct: 220 MPPFALRQAKR 230
|
| >3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 1e-45
Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ ++E RV+IL+ AG K F AG DL + +E R
Sbjct: 40 ELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQV------------RHA 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
++ + ++ +E+ P+PVI+A++G +GGG L A D R A + A L E + +
Sbjct: 88 VSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPG 147
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G QRLPR+IG E+ +T R+I A EA+E GLV + L AIE+ E IA
Sbjct: 148 AGGTQRLPRLIG-VGRAKELIYTGRRISAQEAKEYGLVEFVVPV-HLLEEKAIEIAEKIA 205
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
S P+AV+ K+ + + GL
Sbjct: 206 SNGPIAVRLAKEAISNGIQVDLHTGL 231
|
| >3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 1e-45
Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 18/206 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
D ++ ++I++ I + G DL M ++ L+
Sbjct: 36 AFNAALDQAEKDR--AIVIVTGQPGILSGGYDLKVM-------------TSSAEAAINLV 80
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTAD 119
+ P P+I A G + G L+ +AD R L EV IG+T
Sbjct: 81 AQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMH 140
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
++ + +S N A + A G + K+ E L A+ + +
Sbjct: 141 HAGIELARDRLR-KSAFNRSVINAEMFDPEGAMAAGFLDKVVSV-EELQGAALAVAAQLK 198
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ A + TK + ++ +
Sbjct: 199 KINMNAHKKTKLKVRKGLLDTLDAAI 224
|
| >4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 2e-45
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 14/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI D L ++ ++L +IF+AG D+ + +L A
Sbjct: 54 EIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEA------------DTAA 101
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
++I ++ PKP ++AV G +G G++L AAD R + + F E+ GL
Sbjct: 102 RVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGG 161
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RL R++G S E+ F+ R +A EA GL+ + + + A+
Sbjct: 162 GGMGRLTRVVG-SSRAKELVFSGRFFDAEEALALGLIDDMVAP-DDVYDSAVAWARRYLE 219
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P A+ K + + E
Sbjct: 220 CPPRALAAAKAVINDVFELEATERA 244
|
| >3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-45
Identities = 45/205 (21%), Positives = 74/205 (36%), Gaps = 17/205 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E + + E V++L ++F G D + + +Q L L
Sbjct: 38 ECLQVLNQC-ETSTVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEP---LYDLW 93
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
L+ P IS V G GG+ ++A DI A + A F+L E+ GL
Sbjct: 94 MK-------LQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPAC 146
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
L R IG + + + + I EA E GL+ + + LL + +
Sbjct: 147 VL-PFLIRRIG-RQKAHYMTLMTKPISVQEASEWGLIDAFDAESDVLLR---KHLLRLRR 201
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+ + K+ + S DH V
Sbjct: 202 LNKKGIAHYKQ-FMSSLDHQVSRAK 225
|
| >3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 4e-45
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ L ++ + II++ + K F AG D+ M L A D
Sbjct: 56 EVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTAD------------ 103
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + L P I+AV G +GGG L D+ A A F E+ +G+ +
Sbjct: 104 --FFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGM 161
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R IG ++ ++ T R ++AAEA GLVS++ + LL A I+
Sbjct: 162 GGSQRLTRAIG-KAKAMDLILTGRTMDAAEAERSGLVSRVVPA-DDLLTEARATATTISQ 219
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
S A + K+ + + + ++ EGL
Sbjct: 220 MSASAARMAKEAVNRAFESSLSEGL 244
|
| >3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263 | Back alignment and structure |
|---|
Score = 151 bits (385), Expect = 4e-45
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + E I+++ + + F AG D++ M++L A + +
Sbjct: 41 EVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERN------------ 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
SL + KP+++AV G +GGG L D+ A A F E+ +G+ +
Sbjct: 89 --LLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGL 146
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G ++ ++ T R + A EA GLVS++ LL A+ + + IA
Sbjct: 147 GGTQRLTRAVG-KAKAMDLCLTGRSLTAEEAERVGLVSRIVPA-ADLLDEALAVAQRIAR 204
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
S A + K + + + + G+
Sbjct: 205 MSRPAGRAVKDAINEAFERPLSAGM 229
|
| >1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 1e-44
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++ E+ I+L+ K F AG D+ M + +
Sbjct: 38 ELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGK------------ 85
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + R KPVI+AV+G +GGG L DI YA + A F E+ +G
Sbjct: 86 --FLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGA 143
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL E+ T +I A +A++ GLVSK++ E+L+ AI+ E IA+
Sbjct: 144 GGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIFPV-ETLVEEAIQCAEKIAN 201
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
S + V K+++ + + + EG
Sbjct: 202 NSKIIVAMAKESVNAAFEMTLTEGN 226
|
| >1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 1e-44
Identities = 41/208 (19%), Positives = 74/208 (35%), Gaps = 17/208 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ + L ++ R +IL++ +F+AGLDL+ M
Sbjct: 35 ELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHY------------AGY 82
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFT--LKEVDIGLT 117
Q+ L + ++SA++GAC GG + D R + + L E +G+
Sbjct: 83 WKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGII 142
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
A L IG AEA + G+V ++ + E + + A+
Sbjct: 143 APFWLKDTLENTIG-HRAAERALQLGLLFPPAEALQVGIVDQVVPE-EQVQSTALSAIAQ 200
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ A Q TK + + +
Sbjct: 201 WMAIPDHARQLTKAMMRKATASRLVTQR 228
|
| >1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 1e-44
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
+ + D+L +++ R II+ + IF AG DL +
Sbjct: 43 MLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEV------------GPF 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
++ + I+ + P P I+A+ G +GGG+ L A DIR A A L E + +
Sbjct: 91 VSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPG 150
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKE---SLLAGAIELGE 176
G QRLPR IG SL E+ F+AR ++ EA+ GL+S + + + + A++L
Sbjct: 151 GGGTQRLPRAIG-MSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAR 209
Query: 177 LIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ PVA++ K + + + GL
Sbjct: 210 EFLPQGPVAMRVAKLAINQGMEVDLVTGL 238
|
| >3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 2e-44
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F +L+E+E R ++L+A+GK F AG DL M + ++ AR + ++ +
Sbjct: 57 ALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAI- 115
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+R P PVI+ VHG G L+ D+ AT+DA F + +++GL
Sbjct: 116 ----------QRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLFCST 165
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ L R +G + E+ T + A +A+ GLV+++ ++L + I +
Sbjct: 166 PGVA-LSRNVG-RKAAFEMLVTGEFVSADDAKGLGLVNRVVAP-KALDDEIEAMVSKIVA 222
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
K AV K + +E
Sbjct: 223 KPRAAVAMGKALFYRQIETDIESAY 247
|
| >3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 3e-44
Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 16/215 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKI-------FTAGLDLSGMLSLGQEIAEQEDVARKS 53
E+ D + + V++L+ G F +G D G + A + A
Sbjct: 88 ELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDT-ADTV 146
Query: 54 KILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEV 112
+ R + + PK VI V+G GGG SL D+ A+++ A F +
Sbjct: 147 DVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDA 206
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
D+G L R +G Q EI F R A + + G V+ + + E L +
Sbjct: 207 DVGSFDGGYGSAYLARQVG-QKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAE-LETVGL 264
Query: 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
+ I +KSP A + K + +++GL
Sbjct: 265 QWAAEINAKSPQAQRMLKFAF-----NLLDDGLVG 294
|
| >1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 4e-44
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 1 EIGECFDSLSENEECRVIIL--SAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRK 58
++ + L E R IIL + K+F+AG D+ + S G++ +D
Sbjct: 35 DLMQALSDL-NRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDD---------- 83
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
++ +++ PKP+IS V G+ GG +I ++D+ A + F++ V++G+
Sbjct: 84 ---PLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPY 140
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
++ + L R G +V E+ FTA I A A G+++ + + E L +++ I
Sbjct: 141 NLVGIHNLTRDAG-FHIVKELIFTASPITAQRALAVGILNHVVEV-EELEDFTLQMAHHI 198
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ K+P+A+ K+ L +
Sbjct: 199 SEKAPLAIAVIKEELRVLGEAHTMNSD 225
|
| >2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 6e-44
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E D + + + +V+I+ + K F+AG D++ + S +
Sbjct: 39 EFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFK------------TQF 86
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAW-FTLKEVDIGLTA 118
+++ + R P+ I+ + G +GGG+ + A D+R+ +A L EV +G+ A
Sbjct: 87 CLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLA 146
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G QRL R+IG S ++ T I EA E GLV++++ E +
Sbjct: 147 GTGGTQRLARLIG-YSRALDMNITGETITPQEALEIGLVNRVFPQ-AETRERTREYARKL 204
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGL 205
A+ + AV K ++ ++ + +
Sbjct: 205 ANSATYAVSNIKLAIMNGKEMPLNVAI 231
|
| >3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 1e-43
Identities = 40/207 (19%), Positives = 76/207 (36%), Gaps = 14/207 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ + L+ RV+I +A F +D++ + E A+
Sbjct: 38 DLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGG---------PG 88
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTA 118
+ L + P I+ + G G G + A D+R+A+++ A EV IG
Sbjct: 89 DASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPP 148
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
GA+Q L R++G + E T+ +A A G V++ D L + +
Sbjct: 149 GAGAIQHLTRLLG-RGRALEAVLTSSDFDADLAERYGWVNRAVPD-AELDEFVAGIAARM 206
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ A+ K + + +
Sbjct: 207 SGFPRDALIAAKS-AINAISLPAPAEV 232
|
| >3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 2e-43
Identities = 38/193 (19%), Positives = 77/193 (39%), Gaps = 11/193 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ +L+++ RVI+ S+A + F A +D+ + + + +
Sbjct: 39 ELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMR-------IGEKMDALQELAASAPAD 91
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTA 118
+ +Q + P+ I + G GGG + AAD+ +A + A E +G+
Sbjct: 92 VNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIP 151
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G Q L +G ++ E+ TA +A A G +++ + L + I
Sbjct: 152 GGGGTQYLRGRVG-RNRALEVVLTADLFDAETAASYGWINRALPA-DELDEYVDRVARNI 209
Query: 179 ASKSPVAVQGTKK 191
A+ ++ K+
Sbjct: 210 AALPDGVIEAAKR 222
|
| >2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440 | Back alignment and structure |
|---|
Score = 146 bits (369), Expect = 3e-41
Identities = 44/224 (19%), Positives = 80/224 (35%), Gaps = 24/224 (10%)
Query: 1 EIGECFDSLSENEECRVIILSAA---------GKIFTAGLDLSGM----LSLGQEIAEQE 47
++ D + RV +L ++F+AG++L + +SL + +E
Sbjct: 198 DMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRRE 257
Query: 48 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWF 107
+ L + R KP ++AV G IGGG L+ D A+ DA+F
Sbjct: 258 LGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYF 317
Query: 108 TLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESL 167
+L G+ RL R G + ++ R+I A E LV ++ + + L
Sbjct: 318 SLPAAKEGIIPGAAN-LRLGRFAG-PRVSRQVILEGRRIWAKEPEARLLVDEVVEP-DEL 374
Query: 168 LAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211
A + + +A + +E +
Sbjct: 375 DAAIERSLTRLDGDAVLANRRMLN--------LADESPDGFRAY 410
|
| >2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 4e-41
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 14/192 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ + F +++ VI+L+ G F +G D G +Q I R
Sbjct: 44 EMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQ--------IPRLN 95
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ Q+ I PKPVI+ V G +GGG L D+ A +A F +G
Sbjct: 96 VLDLQRLI---RIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDA 152
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
L RI+G EI + R+ A EA + GLV+ + ++ + ++ + I
Sbjct: 153 GYGSGYLARIVG-HKKAREIWYLCRQYNAQEALDMGLVNTVVPLEK-VEDETVQWCKEIM 210
Query: 180 SKSPVAVQGTKK 191
SP A++ K
Sbjct: 211 KHSPTALRFLKA 222
|
| >3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 8e-41
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 15/208 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ + ++ VIIL+ AG K F +G D G + +
Sbjct: 59 EMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG-------VHHLN 111
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ +Q+ I CPKPV++ V G IGGG L D+ A +A F +G
Sbjct: 112 VLDFQRQI---RTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDG 168
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
+ RI+G Q EI F R+ +A +A + GLV+ + + L + +
Sbjct: 169 GWGASYMARIVG-QKKAREIWFLCRQYDAKQALDMGLVNTVVPLAD-LEKETVRWCREML 226
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
SP+A++ K + D + GL +
Sbjct: 227 QNSPMALRCLKA--ALNADCDGQAGLQE 252
|
| >2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-40
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 14/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ +++ + +VII+SA G +F++G DL + E SK++ +
Sbjct: 64 SLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHI- 122
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
P PVI+ V+G G L+ + DI A+ + F V++GL
Sbjct: 123 ----------RNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCST 172
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ L R + + E+ FT I A EA GL+SK+ + L + + IAS
Sbjct: 173 PGVA-LARAVPR-KVALEMLFTGEPISAQEALLHGLLSKVVPE-AELQEETMRIARKIAS 229
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
S V K T +
Sbjct: 230 LSRPVVSLGKATFYKQLPQDLGTAY 254
|
| >4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 2e-38
Identities = 55/213 (25%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAG------KIFTAGLDLSGMLSLGQEIAEQEDVARKSK 54
E+ + F + E+ V++L+ AG F +G D S G +
Sbjct: 41 ELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLD 100
Query: 55 ILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI 114
+ R + PK VI+ V G IGGG L D+ A +A F +
Sbjct: 101 LQRLI-----------RSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKV 149
Query: 115 GLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIEL 174
G L RI+G Q EI + R+ A EA G+V+ + L I+
Sbjct: 150 GSFDGGFGSSYLARIVG-QKKAREIWYLCRQYSAQEAERMGMVNTVVPVDR-LEEEGIQW 207
Query: 175 GELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
+ I SKSP+A++ K F+ D + GL +
Sbjct: 208 AKEILSKSPLAIRCLKAA--FNADCDGQAGLQE 238
|
| >3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 6e-37
Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 13/210 (6%)
Query: 1 EIGECFDSLSENEEC-----RVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKI 55
+I +L + ++L++ +F G DL+ L +E + +
Sbjct: 67 DITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRC 126
Query: 56 LRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 115
+R + I+ V G +GGG + A + L EV
Sbjct: 127 VRG-----VHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFD 181
Query: 116 LTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELG 175
L +GA + + I L +I A + GLV ++ + +A ++
Sbjct: 182 LFPGMGAYSFMCQRIS-AHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQ-GVAAVEQVI 239
Query: 176 ELIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ ++P A ++ + +EE +
Sbjct: 240 R-ESKRTPHAWAAMQQVREMTTAVPLEEMM 268
|
| >2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 4e-32
Identities = 40/212 (18%), Positives = 70/212 (33%), Gaps = 17/212 (8%)
Query: 1 EIGECFDSLS--ENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRK 58
E+ + + E V++ S ++F +G ++ + A K +
Sbjct: 62 ELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLS--------THAWKVNFCKF 113
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVD-IG 115
T S ++AV+GAC GGG L A D Y D + +L EV +G
Sbjct: 114 TNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLG 173
Query: 116 LTADVGALQRL--PRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173
+ G L R+ R + + + A+ LV ++
Sbjct: 174 VLPGTGGLTRVTDKRKVR-HDRADIFCTVVEGVRGERAKAWRLVDEVVKP-NQFDQAIQA 231
Query: 174 LGELIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+A++S L E+GL
Sbjct: 232 RALELAAQSDRPAHAQGVPLTRIERTDREDGL 263
|
| >2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556 | Back alignment and structure |
|---|
Score = 61.2 bits (148), Expect = 7e-11
Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 28/209 (13%)
Query: 1 EIGECFDSLSENE-ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E + S+ NE + G D +L+ + + +D +R+
Sbjct: 312 EFDDAILSMRTNELAVGTWVFRTEG-------DARHLLAADASLMQHKDHW----FVRET 360
Query: 60 ITTYQKSISSLERCPKPVISAV-HGACIGGGMS-LITAADIRYATKDAWFTLKEVDIGLT 117
I +++++ ++ + + + + G+C G + L AAD Y +E I L+
Sbjct: 361 IGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPAITLS 420
Query: 118 AD-------VGALQRLP-RIIGNQSLVNEI-AFTARKIEAAEARECGLVSKLYDDK--ES 166
V RL R ++ + + + I+ EA GLV+ DD
Sbjct: 421 EVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWAD 480
Query: 167 LLAGAIELGELIASKSPVAVQGTKKTLVF 195
+ A+E E A+ SP A+ G + L F
Sbjct: 481 EIRIALE--E-RAAMSPDALTGLEANLRF 506
|
| >2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 5e-29
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 12/192 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ ++ + + I+++ A F+ G D+SG + + ++ +
Sbjct: 38 NLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKE---------PKAGY 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ LE KP ++A+ G +GGG+ L A R + A L E+ +G+
Sbjct: 89 ISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGF 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIEL-GELIA 179
G QRLPR++G + I T++ ++A E GL+ + L+ A +++
Sbjct: 149 GGTQRLPRLVGLTKALEMIL-TSKPVKAEEGHSLGLIDAVVPP-AELVTTARRWALDIVG 206
Query: 180 SKSPVAVQGTKK 191
+ P +K
Sbjct: 207 RRKPWVSSVSKT 218
|
| >1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 5e-27
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + D++ + + +I+S+ +F G D++ + + + L
Sbjct: 39 ELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAE---------LIAGN 89
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
K S E P ++A++G +GGG+ + AAD R A L EV +G+
Sbjct: 90 LEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGF 149
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G RLPR+IG + V E + ++ A +A + V + + L A A++L + S
Sbjct: 150 GGTVRLPRLIGVDNAV-EWIASGKENRAEDALKVSAVDAVVTA-DKLGAAALDLIKRAIS 207
Query: 181 K 181
Sbjct: 208 G 208
|
| >3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-26
Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 23/216 (10%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + I++ A F AG D+ G + +A V
Sbjct: 51 EVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDE--------- 101
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
++R KPV++A+ G +GGG+ L R A A L EV +G+
Sbjct: 102 ---------IQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGA 152
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
Q LPR++G + ++ + + + A EA G++ + + AI+ + I
Sbjct: 153 RGTQLLPRVVGVPVAL-DLITSGKYLSADEALRLGILDAVVKS--DPVEEAIKFAQKIID 209
Query: 181 KSPVAVQGTKKTL--VFSRDHAVEEGLNQVDKESKN 214
K + K + + + D E + +V K+
Sbjct: 210 KPIEPRRIFNKPVPSLPNMDSVFAEAIAKVRKQYPG 245
|
| >3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 8e-16
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQE-IAEQEDVARKSKILRK 58
+I ++ E +II+ AG K F AG D+ + + R+ +L
Sbjct: 37 QIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNN 96
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+ + KP ++ +HG +GGG+ L R AT+ F + E IGL
Sbjct: 97 AVGSC----------QKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFP 146
Query: 119 DVGA---LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL 156
DVG L RL +G +A T +++ + G+
Sbjct: 147 DVGGGYFLPRLQGKLGYF-----LALTGFRLKGRDVYRAGI 182
|
| >3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 2e-15
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDL-----SGMLSLGQEIAEQEDVARKSK 54
+ + ++ ++L +G K F AG D+ + + + GQ + +
Sbjct: 73 AMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEY 132
Query: 55 ILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI 114
L L+ TY KPV+ G +GGG+ L+ A + T+ + + EV I
Sbjct: 133 RLDYLLHTY----------GKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTI 182
Query: 115 GLTADVGA---LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL 156
GL DVG L R+P +G + TA + AA+A GL
Sbjct: 183 GLYPDVGGSYFLNRMPGKMGLF-----LGLTAYHMNAADACYVGL 222
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 1e-07
Identities = 44/247 (17%), Positives = 82/247 (33%), Gaps = 58/247 (23%)
Query: 48 DVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIR-YATKDA- 105
+V+R L KL ++++ L P + + G +G G + + Y +
Sbjct: 130 NVSRLQPYL-KL----RQALLELR--PAKNV-LIDGV-LGSGKTWVALDVCLSYKVQCKM 180
Query: 106 -----WFTLKEVDIGLTADVGALQRL-PRIIGNQSLVNEIAFTAR-KIEAAEARECGLV- 157
W LK + + LQ+L +I N + ++ + + +I + +A L+
Sbjct: 181 DFKIFWLNLKNCNSP-ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 158 SKLYDDKESLLAGAIELGEL--IASKSPV-AVQGTKKTLVFSRDHAV------------- 201
SK Y + LL + L + + A + K L+ +R V
Sbjct: 240 SKPY--ENCLL---V----LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 202 ----EEGLNQVDKESKNGCDRR-NCNKGVSPERMSHDCPECLIGSIGVF-----HTLDRV 251
L E K+ + +C P + P + I T D
Sbjct: 291 LDHHSMTLT--PDEVKSLLLKYLDCRPQDLPREVLTTNP-RRLSIIAESIRDGLATWDNW 347
Query: 252 DLNQCDE 258
CD+
Sbjct: 348 KHVNCDK 354
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 5e-04
Identities = 32/326 (9%), Positives = 79/326 (24%), Gaps = 114/326 (34%)
Query: 12 NEECR--VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 69
+ C + KIF L+L + + + K+L ++ +
Sbjct: 168 LDVCLSYKVQCKMDFKIF--------WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 70 LERCPKPVISA-----------VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG--- 115
+ S + C L+ +++ +A ++
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENC------LLVLLNVQ----NAK-AWNAFNLSCKI 268
Query: 116 --LTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI- 172
T + + + ++ + + L D+ +SLL +
Sbjct: 269 LLTTRF-------------KQVTDFLSAATTTHISLDHHSMTLTP---DEVKSLLLKYLD 312
Query: 173 ----ELGELIASKSPVAV--------------QGTKKTLVFSRDHAVEEGLNQVDKESKN 214
+L + + +P + K +E LN ++
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA--- 369
Query: 215 GCDRRNC-------NKGVS-PER--------MSHDCPE---------CLI------GSIG 243
+ R P + L+ +I
Sbjct: 370 --EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 244 VFHTLDRVDLNQCDEDLALLFGGKHR 269
+ ++ + + + AL HR
Sbjct: 428 I-PSIYLELKVKLENEYAL-----HR 447
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 275 | |||
| 3hrx_A | 254 | Probable enoyl-COA hydratase; the spiral fold, the | 100.0 | |
| 4fzw_C | 274 | 1,2-epoxyphenylacetyl-COA isomerase; structural ge | 100.0 | |
| 4fzw_A | 258 | 2,3-dehydroadipyl-COA hydratase; structural genomi | 100.0 | |
| 3kqf_A | 265 | Enoyl-COA hydratase/isomerase family protein; IDP0 | 100.0 | |
| 3gow_A | 254 | PAAG, probable enoyl-COA hydratase; the spiral fol | 100.0 | |
| 3pea_A | 261 | Enoyl-COA hydratase/isomerase family protein; stru | 100.0 | |
| 3g64_A | 279 | Putative enoyl-COA hydratase; alpha-beta structure | 100.0 | |
| 3p5m_A | 255 | Enoyl-COA hydratase/isomerase; seattle structural | 100.0 | |
| 3moy_A | 263 | Probable enoyl-COA hydratase; ssgcid, seattle stru | 100.0 | |
| 3i47_A | 268 | Enoyl COA hydratase/isomerase (crotonase); structu | 100.0 | |
| 3sll_A | 290 | Probable enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 3lke_A | 263 | Enoyl-COA hydratase; nysgrc, target 112 structural | 100.0 | |
| 3hin_A | 275 | Putative 3-hydroxybutyryl-COA dehydratase; structu | 100.0 | |
| 3h81_A | 278 | Enoyl-COA hydratase ECHA8; niaid, decode, infectio | 100.0 | |
| 1nzy_A | 269 | Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen | 100.0 | |
| 2ej5_A | 257 | Enoyl-COA hydratase subunit II; structural genomic | 100.0 | |
| 2ppy_A | 265 | Enoyl-COA hydratase; beta-oxidation, fatty acid me | 100.0 | |
| 1dci_A | 275 | Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg | 100.0 | |
| 3qk8_A | 272 | Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB | 100.0 | |
| 3rrv_A | 276 | Enoyl-COA hydratase/isomerase; structural genomics | 100.0 | |
| 3myb_A | 286 | Enoyl-COA hydratase; ssgcid, struct genomics, seat | 100.0 | |
| 3qmj_A | 256 | Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, | 100.0 | |
| 1wz8_A | 264 | Enoyl-COA hydratase; lyase, crotonase, hexamer, st | 100.0 | |
| 2j5i_A | 276 | P-hydroxycinnamoyl COA hydratase/lyase; vanillin, | 100.0 | |
| 2pbp_A | 258 | Enoyl-COA hydratase subunit I; B-oxidation, struct | 100.0 | |
| 4hdt_A | 353 | 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti | 100.0 | |
| 2a7k_A | 250 | CARB; crotonase, antibiotic, beta-lactam, biosynth | 100.0 | |
| 3l3s_A | 263 | Enoyl-COA hydratase/isomerase family protein; crot | 100.0 | |
| 2vx2_A | 287 | Enoyl-COA hydratase domain-containing protein 3; i | 100.0 | |
| 1uiy_A | 253 | Enoyl-COA hydratase; lyase, beta-oxidation, croton | 100.0 | |
| 2f6q_A | 280 | Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis | 100.0 | |
| 4f47_A | 278 | Enoyl-COA hydratase ECHA19; ssgcid, seattle struct | 100.0 | |
| 3qre_A | 298 | Enoyl-COA hydratase, ECHA12_1; structural genomics | 100.0 | |
| 1mj3_A | 260 | Enoyl-COA hydratase, mitochondrial; homohexamer, l | 100.0 | |
| 3swx_A | 265 | Probable enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 3rsi_A | 265 | Putative enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 1sg4_A | 260 | 3,2-trans-enoyl-COA isomerase, mitochondrial; crot | 100.0 | |
| 3fdu_A | 266 | Putative enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 4di1_A | 277 | Enoyl-COA hydratase ECHA17; structural genomics, s | 100.0 | |
| 2fbm_A | 291 | Y chromosome chromodomain protein 1, telomeric IS; | 100.0 | |
| 2gtr_A | 261 | CDY-like, chromodomain Y-like protein; structural | 100.0 | |
| 3oc7_A | 267 | Enoyl-COA hydratase; seattle structural genomics c | 100.0 | |
| 3lao_A | 258 | Enoyl-COA hydratase/isomerase; alpha-beta sandwich | 100.0 | |
| 3r9q_A | 262 | Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome | 100.0 | |
| 3gkb_A | 287 | Putative enoyl-COA hydratase; structural genomics, | 100.0 | |
| 1hzd_A | 272 | AUH, AU-binding protein/enoyl-COA hydratase; RNA-b | 100.0 | |
| 3tlf_A | 274 | Enoyl-COA hydratase/isomerase; structural genomics | 100.0 | |
| 3qxz_A | 265 | Enoyl-COA hydratase/isomerase; structural genomics | 100.0 | |
| 3pe8_A | 256 | Enoyl-COA hydratase; emerald biostructures, struct | 100.0 | |
| 3trr_A | 256 | Probable enoyl-COA hydratase/isomerase; ssgcid, st | 100.0 | |
| 3h0u_A | 289 | Putative enoyl-COA hydratase; structural genomics, | 100.0 | |
| 3t89_A | 289 | 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase | 100.0 | |
| 4eml_A | 275 | Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe | 100.0 | |
| 3r9t_A | 267 | ECHA1_1; ssgcid, seattle structural genomics cente | 100.0 | |
| 3qxi_A | 265 | Enoyl-COA hydratase ECHA1; structural genomics, se | 100.0 | |
| 1ef8_A | 261 | Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc | 100.0 | |
| 3m6n_A | 305 | RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X | 100.0 | |
| 3t8b_A | 334 | 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase | 100.0 | |
| 3ju1_A | 407 | Enoyl-COA hydratase/isomerase family protein; alph | 100.0 | |
| 2q35_A | 243 | CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} | 100.0 | |
| 2uzf_A | 273 | Naphthoate synthase; lyase, menaquinone biosynthes | 100.0 | |
| 3hp0_A | 267 | Putative polyketide biosynthesis enoyl-COA hydrata | 100.0 | |
| 3r6h_A | 233 | Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m | 100.0 | |
| 3bpt_A | 363 | 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet | 100.0 | |
| 3he2_A | 264 | Enoyl-COA hydratase ECHA6; fatty acid metabolism, | 100.0 | |
| 2j5g_A | 263 | ALR4455 protein; enzyme evolution, C-C bond hydrol | 100.0 | |
| 3ot6_A | 232 | Enoyl-COA hydratase/isomerase family protein; stru | 100.0 | |
| 1pjh_A | 280 | Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral | 100.0 | |
| 3isa_A | 254 | Putative enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 3njd_A | 333 | Enoyl-COA hydratase; ssgcid, mycobacerium smegmati | 100.0 | |
| 1szo_A | 257 | 6-oxocamphor hydrolase; enzyme-product complex; HE | 100.0 | |
| 3t3w_A | 279 | Enoyl-COA hydratase; ssgcid, structural genomics, | 100.0 | |
| 3zwc_A | 742 | Peroxisomal bifunctional enzyme; beta oxidation pa | 100.0 | |
| 2np9_A | 440 | DPGC; protein inhibitor complex, oxidoreductase; H | 100.0 | |
| 1wdk_A | 715 | Fatty oxidation complex alpha subunit; alpha2BETA2 | 100.0 | |
| 2wtb_A | 725 | MFP2, fatty acid multifunctional protein (ATMFP2); | 100.0 | |
| 2w3p_A | 556 | Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri | 100.0 | |
| 3rst_A | 240 | Signal peptide peptidase SPPA; alpha/beta protein | 99.82 | |
| 3bf0_A | 593 | Protease 4; bacterial, hydrolase, inner membrane, | 99.8 | |
| 3viv_A | 230 | 441AA long hypothetical NFED protein; protein-pept | 99.77 | |
| 1y7o_A | 218 | ATP-dependent CLP protease proteolytic subunit; hy | 99.58 | |
| 2f9y_B | 304 | Acetyl-coenzyme A carboxylase carboxyl transferas | 99.54 | |
| 2f9y_A | 339 | Acetyl-COA carboxylase, carboxyltransferase alpha; | 99.46 | |
| 2f9i_A | 327 | Acetyl-coenzyme A carboxylase carboxyl transferase | 99.46 | |
| 2cby_A | 208 | ATP-dependent CLP protease proteolytic subunit 1; | 99.09 | |
| 2w3p_A | 556 | Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri | 98.88 | |
| 1yg6_A | 193 | ATP-dependent CLP protease proteolytic subunit; en | 98.66 | |
| 3qwd_A | 203 | ATP-dependent CLP protease proteolytic subunit; ca | 98.61 | |
| 2f6i_A | 215 | ATP-dependent CLP protease, putative; structural g | 98.59 | |
| 3p2l_A | 201 | ATP-dependent CLP protease proteolytic subunit; st | 98.52 | |
| 1tg6_A | 277 | Putative ATP-dependent CLP protease proteolytic S; | 98.51 | |
| 3bf0_A | 593 | Protease 4; bacterial, hydrolase, inner membrane, | 98.24 | |
| 1pix_A | 587 | Glutaconyl-COA decarboxylase A subunit; biotin-dep | 97.88 | |
| 3iav_A | 530 | Propionyl-COA carboxylase complex B subunit; accas | 97.69 | |
| 4gm2_A | 205 | ATP-dependent CLP protease proteolytic subunit; st | 97.68 | |
| 1x0u_A | 522 | Hypothetical methylmalonyl-COA decarboxylase ALPH; | 97.49 | |
| 1on3_A | 523 | Methylmalonyl-COA carboxyltransferase 12S subunit; | 97.49 | |
| 3n6r_B | 531 | Propionyl-COA carboxylase, beta subunit; protein c | 97.48 | |
| 2bzr_A | 548 | Propionyl-COA carboxylase beta chain 5; fatty acid | 97.35 | |
| 2f9i_B | 285 | Acetyl-coenzyme A carboxylase carboxyl transferase | 97.29 | |
| 3u9r_B | 555 | MCC beta, methylcrotonyl-COA carboxylase, beta-sub | 97.01 | |
| 1vrg_A | 527 | Propionyl-COA carboxylase, beta subunit; TM0716, s | 96.75 | |
| 1x0u_A | 522 | Hypothetical methylmalonyl-COA decarboxylase ALPH; | 96.47 | |
| 1vrg_A | 527 | Propionyl-COA carboxylase, beta subunit; TM0716, s | 96.38 | |
| 1pix_A | 587 | Glutaconyl-COA decarboxylase A subunit; biotin-dep | 96.02 | |
| 1on3_A | 523 | Methylmalonyl-COA carboxyltransferase 12S subunit; | 95.95 | |
| 3gf3_A | 588 | Glutaconyl-COA decarboxylase subunit A; sodium ION | 95.88 | |
| 2x24_A | 793 | Acetyl-COA carboxylase; fatty acid biosynthesis, l | 95.87 | |
| 3k8x_A | 758 | Acetyl-COA carboxylase; transferase, carboxyltrans | 95.83 | |
| 2bzr_A | 548 | Propionyl-COA carboxylase beta chain 5; fatty acid | 95.4 | |
| 3iav_A | 530 | Propionyl-COA carboxylase complex B subunit; accas | 94.82 | |
| 3u9r_B | 555 | MCC beta, methylcrotonyl-COA carboxylase, beta-sub | 94.48 | |
| 3n6r_B | 531 | Propionyl-COA carboxylase, beta subunit; protein c | 94.26 | |
| 3gf3_A | 588 | Glutaconyl-COA decarboxylase subunit A; sodium ION | 92.65 | |
| 3ju1_A | 407 | Enoyl-COA hydratase/isomerase family protein; alph | 92.26 | |
| 4hdt_A | 353 | 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti | 90.8 |
| >3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=355.45 Aligned_cols=219 Identities=28% Similarity=0.384 Sum_probs=202.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+++++|++||+|||+|.|++||+|+|++++...... ...+...++.++..+.++||||||+
T Consensus 31 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~kPvIAa 97 (254)
T 3hrx_A 31 ALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPD-------------YEAHLRRYNRVVEALSGLEKPLVVA 97 (254)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCC-------------HHHHTHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchh-------------hHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999987543221 1233456677889999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|+ +++++|++||++++|+||+++||||++
T Consensus 98 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~-~~A~~llltg~~i~A~eA~~~GLv~~v 176 (254)
T 3hrx_A 98 VNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGL-AKAQELLLLSPRLSAEEALALGLVHRV 176 (254)
T ss_dssp ECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCc-chHHHHhhcCcccCHHHHHHCCCeEEe
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++||+.+|+.+|+.
T Consensus 177 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P 249 (254)
T 3hrx_A 177 VPA-EKLMEEALSLAKELAQGPTRAYALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPP 249 (254)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCC
T ss_pred cCc-HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCC
Confidence 997 8999999999999999999999999999999999999999999998888889999999999999987643
|
| >4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-50 Score=355.82 Aligned_cols=224 Identities=24% Similarity=0.380 Sum_probs=198.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++....... .......+.+.++.++..|.++||||||+
T Consensus 46 ~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~l~~~~kPvIAa 117 (274)
T 4fzw_C 46 QLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGP--------APDLGMSVERFYNPLVRRLAKLPKPVICA 117 (274)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC-----------------CCCHHHHHHHTHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhcccccc--------chHHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 4788999999999999999999999999999999875322100 00112334455677889999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|+ .++++|++||++++|+||+++||||+|
T Consensus 118 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~llltg~~i~A~eA~~~GLv~~v 196 (274)
T 4fzw_C 118 VNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGR-ARAMGLALLGNQLSAEQAHEWGMIWQV 196 (274)
T ss_dssp ECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCH-HHHHHHHHHCCCEEHHHHHHTTSSSEE
T ss_pred ECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhH-HHHHHHHHhCCcCCHHHHHHCCCceEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
||+ +++.+++.+++++++..||.+++.+|+.++.....++++.++.+...+...+.++|++||+.+|+.+|+.
T Consensus 197 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P 269 (274)
T 4fzw_C 197 VDD-ETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSP 269 (274)
T ss_dssp ECG-GGHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCC
T ss_pred eCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCC
Confidence 997 9999999999999999999999999999999999999999999998888889999999999999987653
|
| >4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-50 Score=351.22 Aligned_cols=218 Identities=27% Similarity=0.406 Sum_probs=199.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++..... ...+...++.++.++.++||||||+
T Consensus 36 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~kPvIAa 101 (258)
T 4fzw_A 36 QLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDL--------------AATLNDTRPQLWARLQAFNKPLIAA 101 (258)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCH--------------HHHHTCSHHHHHHHHHTCCSCEEEE
T ss_pred HHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchh--------------hhHHHhHHHHHHHHHHHCCCCEEEE
Confidence 47889999999999999999999999999999998754211 0112233456788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 102 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~llltg~~i~a~eA~~~GLv~~v 180 (258)
T 4fzw_A 102 VNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGK-SLASKMVLSGESITAQQAQQAGLVSDV 180 (258)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred EcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCH-HHHHHHHHcCCcCcHHHHHHCCCeeEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
||+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++||+.+|+.+|+.
T Consensus 181 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P 253 (258)
T 4fzw_A 181 FPS-DLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTP 253 (258)
T ss_dssp ECT-TTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCC
T ss_pred eCc-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCC
Confidence 998 8999999999999999999999999999999999999999999999888889999999999999987643
|
| >3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=344.56 Aligned_cols=220 Identities=30% Similarity=0.487 Sum_probs=203.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|+++++|||+|.| ++||+|+|++++..... .....+...++.++.++.++||||||
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~kPvIA 107 (265)
T 3kqf_A 40 ELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNE------------EQVRHAVSMIRTTMEMVEQLPQPVIA 107 (265)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCH------------HHHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCH------------HHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999 99999999999864321 11234556678889999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 108 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~ 186 (265)
T 3kqf_A 108 AINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGV-GRAKELIYTGRRISAQEAKEYGLVEF 186 (265)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSE
T ss_pred EECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 187 vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p 260 (265)
T 3kqf_A 187 VVPV-HLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTP 260 (265)
T ss_dssp EECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCC
T ss_pred EeCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCC
Confidence 9997 8999999999999999999999999999999998899999999998888889999999999999987653
|
| >3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=343.61 Aligned_cols=221 Identities=28% Similarity=0.495 Sum_probs=200.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++++|||+|.|++||+|+|++++..... . .....+...++.++.++.++||||||+
T Consensus 36 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------~-----~~~~~~~~~~~~~~~~l~~~~kPvIAa 104 (261)
T 3pea_A 36 DVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTE------A-----KQATELAQLGQVTFERVEKCSKPVIAA 104 (261)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCC------H-----HHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCc------h-----hHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999999864321 0 011233444567888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 183 (261)
T 3pea_A 105 IHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGK-AKACEMMLTSTPITGAEALKWGLVNGV 183 (261)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSSSEE
T ss_pred ECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 184 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P 256 (261)
T 3pea_A 184 FAE-ETFLDDTLKVAKQIAGKSPATARAVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKP 256 (261)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCC
T ss_pred cCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCC
Confidence 997 8999999999999999999999999999999988889999999988888888999999999999887654
|
| >3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=343.91 Aligned_cols=225 Identities=22% Similarity=0.328 Sum_probs=203.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++....... .......+...++.++.++.++||||||+
T Consensus 48 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 119 (279)
T 3g64_A 48 DLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSM--------DTARLLDFNRMTGQVVRAVRECPFPVIAA 119 (279)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccc--------hhhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4788999999999999999999999999999999986432100 01112345556778899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcc-cCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT-ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~-p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+|||++|+++||+||++++++|++||+++|++ |++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 120 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~ 198 (279)
T 3g64_A 120 LHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGL-GHATRLLMLGDTVRAPEAERIGLISE 198 (279)
T ss_dssp ECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTCCSE
T ss_pred EcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHCCCCCE
Confidence 9999999999999999999999999999999999999 999999999999995 99999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+..
T Consensus 199 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 273 (279)
T 3g64_A 199 LTEE-GRADEAARTLARRLADGPALAHAQTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPK 273 (279)
T ss_dssp ECCT-TCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCC
T ss_pred ecCc-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCC
Confidence 9998 89999999999999999999999999999999888999999999988888899999999999999876544
|
| >3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-48 Score=337.06 Aligned_cols=214 Identities=26% Similarity=0.357 Sum_probs=196.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++++|+++++|||+|.|++||+|+|++++.. . .+...++.++.++.++||||||+
T Consensus 37 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~---------~---------~~~~~~~~~~~~l~~~~kPvIAa 98 (255)
T 3p5m_A 37 ELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDT---------A---------GAADAANRVVRAITSLPKPVIAG 98 (255)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CH---------H---------HHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcc---------h---------HHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998741 0 23445677888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 99 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 177 (255)
T 3p5m_A 99 VHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGR-ARTSRMAMTAEKISAATAFEWGMISHI 177 (255)
T ss_dssp ECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCH-HHHHHHHHHCCCEEHHHHHHTTSCSEE
T ss_pred eCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHCCCCCEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 178 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p 250 (255)
T 3p5m_A 178 TSA-DEYESVLTDVLRSVSGGPTLAFGWTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTP 250 (255)
T ss_dssp CCT-TCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCC
T ss_pred eCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCC
Confidence 998 8999999999999999999999999999999988899999999998888899999999999999887643
|
| >3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=340.86 Aligned_cols=219 Identities=24% Similarity=0.368 Sum_probs=199.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.+++++++.|++|++|||+|.|++||+|+|++++..... .+ .+...++.++.++.++||||||+
T Consensus 41 ~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----~~---------~~~~~~~~~~~~l~~~~kPvIAa 106 (263)
T 3moy_A 41 EVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTP-----HQ---------ARERNLLSGWDSLTQVRKPIVAA 106 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCH-----HH---------HHHTTTTHHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCc-----hh---------HHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999999864321 00 11234456788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 107 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 185 (263)
T 3moy_A 107 VAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGK-AKAMDLCLTGRSLTAEEAERVGLVSRI 185 (263)
T ss_dssp ECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCH-HHHHHHHHHCCEEEHHHHHHTTSCSEE
T ss_pred ECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+..
T Consensus 186 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~ 259 (263)
T 3moy_A 186 VPA-ADLLDEALAVAQRIARMSRPAGRAVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPE 259 (263)
T ss_dssp ECG-GGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCC
T ss_pred cCc-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCC
Confidence 997 89999999999999999999999999999999988999999999988888999999999999998876443
|
| >3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-48 Score=341.57 Aligned_cols=223 Identities=26% Similarity=0.336 Sum_probs=197.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++...... . ..........++.++.++.++||||||+
T Consensus 35 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~l~~~~kPvIAa 105 (268)
T 3i47_A 35 EMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANF-----T----EEENLEDSLVLGNLMYSISQSPKPTIAM 105 (268)
T ss_dssp HHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTC-----C----HHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccc-----c----HHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999988642110 0 0111233455678889999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++ +|++++|+ .++++|++||++++|+||+++||||++
T Consensus 106 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~-~~A~~llltg~~i~A~eA~~~GLV~~v 183 (268)
T 3i47_A 106 VQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGE-RAAKMLFMSAEVFDATRAYSLNLVQHC 183 (268)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCH-HHHHHHHHHCCEEEHHHHHHTTSCSEE
T ss_pred ECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCCcEe
Confidence 9999999999999999999999999999999999999999887 79999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHH-HHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEE-GLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.....++++ .++.+...+...+.++|++|++.++..+|+..
T Consensus 184 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~ 258 (268)
T 3i47_A 184 VPD-DTLLEFTLKYASQISNNAPEAVKNSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPN 258 (268)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCT
T ss_pred eCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCC
Confidence 997 899999999999999999999999999999998888877 67777777777889999999999999877543
|
| >3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-48 Score=344.87 Aligned_cols=228 Identities=29% Similarity=0.419 Sum_probs=198.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.++.|++||+|||+|.|++||+|+|++++......... . .......+...++.++.++.++||||||+
T Consensus 55 ~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 129 (290)
T 3sll_A 55 PFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGL--T---QPTIALRSMELLDEVILTLRRMHQPVIAA 129 (290)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTC--C---HHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccc--c---chhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999988653221000 0 01123445667788899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccC-chhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD-VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~-~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+ +|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 130 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG~-~~A~~llltG~~i~A~eA~~~GLV~~ 208 (290)
T 3sll_A 130 INGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGT-SRASDIMLTGRDVDADEAERIGLVSR 208 (290)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSSSE
T ss_pred ECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccE
Confidence 999999999999999999999999999999999999999 9999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhc-CCHHHHHHHHHHHhhccc-CCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRD-HAVEEGLNQVDKESKNGC-DRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~l~~~~~~~~~~~-~~~~~~e~~~~~~~~~~sp 235 (275)
+||+ +++.+++.+++++|+..||.+++.+|+.++.... .++++.++.+...+...+ .++|++|++.+++.+|+..
T Consensus 209 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~ 285 (290)
T 3sll_A 209 KVAS-ESLLEECYAIGERIAGFSRPGIELTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAE 285 (290)
T ss_dssp EECG-GGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCC
T ss_pred EeCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCC
Confidence 9997 8999999999999999999999999999999988 899999999988888888 8999999999999876543
|
| >3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-48 Score=339.51 Aligned_cols=223 Identities=21% Similarity=0.309 Sum_probs=198.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCc-ccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIF-TAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~F-caG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.+++++++.|+++|+|||+|.|++| |+|+|++++....... .......+...++.++.++.++||||||
T Consensus 35 ~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~kPvIA 106 (263)
T 3lke_A 35 SLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQ--------SDVRLREVLHVLNHCVLEIFTSPKVTVA 106 (263)
T ss_dssp HHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCS--------SSHHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccC--------CHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999999 9999999986410000 0011234556677889999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 107 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~ 185 (263)
T 3lke_A 107 LINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGY-EQTMNLLLEGKLFTSEEALRLGLIQE 185 (263)
T ss_dssp EECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSSSE
T ss_pred EECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCH-HHHHHHHHhCCCcCHHHHHHcCCCcE
Confidence 99999999999999999999999999999999999999999999999999995 99999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++|+.+++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|+++.+..++
T Consensus 186 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~ 258 (263)
T 3lke_A 186 ICENKQELQERVKNYLKAVSEGYVPAIAATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGH 258 (263)
T ss_dssp EESSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC----
T ss_pred ecCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccC
Confidence 9993389999999999999999999999999999998887899999999988888999999999999998865
|
| >3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-48 Score=342.74 Aligned_cols=217 Identities=26% Similarity=0.411 Sum_probs=196.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+++ |++||+|||+|.|++||+|+|++++..... .....+...++.++.++.++||||||+
T Consensus 47 ~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~kPvIAa 112 (275)
T 3hin_A 47 ALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDA------------TEGLVHSQTWHRVFDKIQYCRVPVIAA 112 (275)
T ss_dssp HHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCH------------HHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccCh------------hhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 356677777 689999999999999999999999854211 011234456678889999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 113 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltG~~i~A~eA~~~GLv~~v 191 (275)
T 3hin_A 113 LKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGV-ARMADMMLTGRVYSAAEGVVHGFSQYL 191 (275)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCCCEE
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+.......+.++|++|++.+++.+|+
T Consensus 192 v~~-~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~ 263 (275)
T 3hin_A 192 IEN-GSAYDKALELGNRVAQNAPLTNFAVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKT 263 (275)
T ss_dssp ESS-SCHHHHHHHHHHHHTTSCHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred eCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCC
Confidence 998 899999999999999999999999999999998889999999988887778899999999999988764
|
| >3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-48 Score=340.84 Aligned_cols=218 Identities=26% Similarity=0.383 Sum_probs=197.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.++.|++|++|||+|.|++||+|+|++++..... .+ .....+...+.++.++||||||+
T Consensus 56 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----~~---------~~~~~~~~~~~~l~~~~kPvIAa 121 (278)
T 3h81_A 56 EVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTF-----AD---------AFTADFFATWGKLAAVRTPTIAA 121 (278)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCH-----HH---------HHHHTTTGGGHHHHTCCSCEEEE
T ss_pred HHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccCh-----hh---------HHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999999864321 00 01111222267889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 122 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~-~~A~~l~ltG~~~~A~eA~~~GLv~~v 200 (278)
T 3h81_A 122 VAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGK-AKAMDLILTGRTMDAAEAERSGLVSRV 200 (278)
T ss_dssp ECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCH-HHHHHHHHhCCCcCHHHHHHCCCccEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 201 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P 273 (278)
T 3h81_A 201 VPA-DDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAP 273 (278)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCC
T ss_pred eCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCC
Confidence 997 8999999999999999999999999999999998899999999998888889999999999999887643
|
| >1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=338.38 Aligned_cols=224 Identities=21% Similarity=0.284 Sum_probs=198.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++...... .+. ......+...+++++.++.++||||||+
T Consensus 34 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~l~~~~kPvIAa 106 (269)
T 1nzy_A 34 EVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGV----AGV---RDHFRIAALWWHQMIHKIIRVKRPVLAA 106 (269)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHH----HHH---HHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccc----cCh---HHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999987532100 000 0011233445677888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 107 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 185 (269)
T 1nzy_A 107 INGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGM-RRAMELMLTNRTLYPEEAKDWGLVSRV 185 (269)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHH-HHHHHHHHHCCCBCHHHHHHHTSCSCE
T ss_pred ECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhH-HHHHHHHHcCCCCCHHHHHHCCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+
T Consensus 186 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~ 257 (269)
T 1nzy_A 186 YPK-DEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHR 257 (269)
T ss_dssp ECH-HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCC
T ss_pred eCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCC
Confidence 997 899999999999999999999999999999988889999999888877778889999999999987653
|
| >2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=334.85 Aligned_cols=218 Identities=26% Similarity=0.369 Sum_probs=192.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++++|||+|.|++||+|+|++++..... . ...... .+++++.++.++||||||+
T Consensus 34 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------~-----~~~~~~--~~~~~~~~l~~~~kPvIAa 100 (257)
T 2ej5_A 34 EVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMD------H-----GDVLRS--RYAPMMKALHHLEKPVVAA 100 (257)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------C------H-----HHHHHH--THHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccc------h-----hHHHHH--HHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 0 001111 2567788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 101 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 179 (257)
T 2ej5_A 101 VNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGR-AKALELAVLGEKVTAEEAAALGLATKV 179 (257)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTCCSEE
T ss_pred ECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCH-HHHHHHHHhCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+
T Consensus 180 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 251 (257)
T 2ej5_A 180 IPL-SDWEEEVKQFAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRK 251 (257)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCC
T ss_pred cCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCC
Confidence 997 899999999999999999999999999999988889999999888887778889999999999987653
|
| >2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=334.84 Aligned_cols=218 Identities=22% Similarity=0.396 Sum_probs=197.6
Q ss_pred CHHHHHHHhhhCCCceEEEEee-CCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCcEE
Q psy14406 1 EIGECFDSLSENEECRVIILSA-AGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY-QKSISSLERCPKPVI 78 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g-~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~kP~I 78 (275)
+|.++|++++.|+++++|||+| .|++||+|+|++++.. .. .+ ...+...+ ++++.++.++|||||
T Consensus 39 ~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~-~~-----~~-------~~~~~~~~~~~~~~~l~~~~kPvI 105 (265)
T 2ppy_A 39 EFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS-AD-----PR-------FKTQFCLFCNETLDKIARSPQVYI 105 (265)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT-SC-----HH-------HHHHHHHHHHHHHHHHHHSSSEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc-cc-----hh-------HHHHHHHHHHHHHHHHHcCCCCEE
Confidence 4788999999999999999999 8899999999998753 11 00 11223345 677889999999999
Q ss_pred EEECchhchHHHHHHHHCCEEEEeCCc-eEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 79 SAVHGACIGGGMSLITAADIRYATKDA-WFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 79 a~v~G~a~GgG~~lal~~D~rva~~~a-~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
|+|||+|+|||++|+++||+||+++++ +|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++|||
T Consensus 106 Aav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv 184 (265)
T 2ppy_A 106 ACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGY-SRALDMNITGETITPQEALEIGLV 184 (265)
T ss_dssp EEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCH-HHHHHHHHHCCCBCHHHHHHHTSS
T ss_pred EEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCH-HHHHHHHHhCCccCHHHHHHCCCc
Confidence 999999999999999999999999999 999999999999999999999999995 899999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 158 SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
|+++|+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+
T Consensus 185 ~~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~ 259 (265)
T 2ppy_A 185 NRVFPQ-AETRERTREYARKLANSATYAVSNIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQ 259 (265)
T ss_dssp SEEECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSC
T ss_pred ceecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCC
Confidence 999997 899999999999999999999999999999998889999999888888888899999999999997654
|
| >1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=337.54 Aligned_cols=230 Identities=50% Similarity=0.839 Sum_probs=199.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++++|+++++|||+|.|++||+|+|++++....... ...+.......+..+...++.++..+.++||||||+
T Consensus 35 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 113 (275)
T 1dci_A 35 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQP-PGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAA 113 (275)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSC-CCSSHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccc-ccchhhhhhHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4788999999999999999999999999999999875421000 000001111123344556677888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|...++++|++||++++|+||+++||||++
T Consensus 114 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~v 193 (275)
T 1dci_A 114 IHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRV 193 (275)
T ss_dssp ECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEE
T ss_pred ECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCcHHHHHHHHHcCCCCCHHHHHHcCCccee
Confidence 99999999999999999999999999999999999999999999999999942799999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMS 231 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~ 231 (275)
+|+.+++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.......+.++|++|++.+++.+
T Consensus 194 v~~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek 264 (275)
T 1dci_A 194 FPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEK 264 (275)
T ss_dssp ESSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTT
T ss_pred cCChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc
Confidence 98547899999999999999999999999999999888899999998888888888999999999999987
|
| >3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=337.58 Aligned_cols=219 Identities=22% Similarity=0.313 Sum_probs=191.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.+++|++||+|||+|.|++||+|+|++++..... .......++..++.++.++.++||||||+
T Consensus 44 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 113 (272)
T 3qk8_A 44 DLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIG----------DYEGRIRIMREARDLVLNLVNLDKPVVSA 113 (272)
T ss_dssp HHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHH----------CHHHHHHHHHHHHHHHHHHHTCCSCEEEE
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhcccc----------chHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998853211 01112344566778899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+|
T Consensus 114 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltg~~~~A~eA~~~GLv~~v 192 (272)
T 3qk8_A 114 IRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGM-AKAKYYLLTCETLSGEEAERIGLVSTC 192 (272)
T ss_dssp ECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSSSEE
T ss_pred ECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCCcEe
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRD---HAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.... ..++..++.+ ...+.++|++|++.++..+|+..
T Consensus 193 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~ 265 (272)
T 3qk8_A 193 VDD-DEVLPTATRLAENLAQGAQNAIRWTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPAR 265 (272)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCC
T ss_pred eCH-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCC
Confidence 997 8999999999999999999999999999987654 2334444333 34678999999999999987644
|
| >3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=338.88 Aligned_cols=218 Identities=26% Similarity=0.373 Sum_probs=198.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+++|+|||+|.|++||+|+|++++..... .......+...++.++.++.++||||||+
T Consensus 59 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 128 (276)
T 3rrv_A 59 GLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSA----------DADLRAKTIRDGREIVLGMARCRIPVVAA 128 (276)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHH----------CHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhccc----------chHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998854211 01123345566788899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 129 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~ellltG~~i~A~eA~~~GLv~~v 207 (276)
T 3rrv_A 129 VNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISL-LLAKEYALTGTRISAQRAVELGLANHV 207 (276)
T ss_dssp ECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCHHHH
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.......+.++|++|++.++..+|
T Consensus 208 v---~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 208 A---DDPVAEAIACAKKILELPQQAVESTKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp E---SSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred H---HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 9 46999999999999999999999999999988877889999998888888899999999999988764
|
| >3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=338.42 Aligned_cols=221 Identities=26% Similarity=0.361 Sum_probs=202.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++..... ......+...++.++.++.++||||||+
T Consensus 57 ~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~kPvIAa 125 (286)
T 3myb_A 57 ALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPS-----------REYYEKLFARCTDVMLAIQRLPAPVIAR 125 (286)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCC-----------HHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhcccc-----------HHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47889999999999999999999999999999999864111 1123455667788899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++ ++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 126 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~-~~A~~llltG~~i~A~eA~~~GLv~~v 203 (286)
T 3myb_A 126 VHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGR-KAAFEMLVTGEFVSADDAKGLGLVNRV 203 (286)
T ss_dssp ECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCH-HHHHHHHHcCCCCCHHHHHHCCCCcEe
Confidence 9999999999999999999999999999999999999 78889999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+..
T Consensus 204 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~ 277 (286)
T 3myb_A 204 VAP-KALDDEIEAMVSKIVAKPRAAVAMGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPE 277 (286)
T ss_dssp ECG-GGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCC
T ss_pred cCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCC
Confidence 997 89999999999999999999999999999999888999999999888888889999999999999877544
|
| >3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=342.02 Aligned_cols=220 Identities=20% Similarity=0.301 Sum_probs=162.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++|+|||+|.|++||+|+|++++...... . ....+...++.++.++.++||||||+
T Consensus 37 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-----~------~~~~~~~~~~~~~~~l~~~~kPvIAa 105 (256)
T 3qmj_A 37 ATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITD-----P------NFSEGKFGFRGLIKALAGFPKPLICA 105 (256)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHS-----S------SCCCCSSHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccc-----h------hHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999988542110 0 00111234567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 106 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 184 (256)
T 3qmj_A 106 VNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGR-QNAAWLLMSSEWIDAEEALRMGLVWRI 184 (256)
T ss_dssp ECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHH-HHHHHHHHSCCCEEHHHHHHHTSSSEE
T ss_pred ECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+
T Consensus 185 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 185 CSP-EELLPEARRHAEILAAKPISSLMAVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHCC-------------------------------------
T ss_pred eCH-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 997 899999999999999999999999999999998889999999998888888899999999999988763
|
| >1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-47 Score=335.47 Aligned_cols=220 Identities=20% Similarity=0.282 Sum_probs=196.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+++++|||+|.|++||+|+|++ +..... .+ ......+...+++++.++.++||||||+
T Consensus 41 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~-----~~----~~~~~~~~~~~~~~~~~l~~~~kPvIAa 110 (264)
T 1wz8_A 41 GLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMR-----AS----HEALLRVFWEARDLVLGPLNFPRPVVAA 110 (264)
T ss_dssp HHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHH-----HC----HHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccc-----cc----hHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4788999999999999999999999999999998 643100 00 0011233455678888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 111 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 189 (264)
T 1wz8_A 111 VEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGM-AKAKYHLLLNEPLTGEEAERLGLVALA 189 (264)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCH-HHHHHHHHHTCCEEHHHHHHHTSSSEE
T ss_pred ECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCceee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++|+..+|.+++.+|+.++..... +++.++.+...+...+.++|++|++.++..+|+
T Consensus 190 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 260 (264)
T 1wz8_A 190 VED-EKVYEKALEVAERLAQGPKEALHHTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRP 260 (264)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSC
T ss_pred cCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCC
Confidence 997 89999999999999999999999999999998877 888888888777778899999999999997664
|
| >2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-47 Score=337.67 Aligned_cols=225 Identities=23% Similarity=0.332 Sum_probs=177.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS-ISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~kP~Ia 79 (275)
+|.++|+.++.|+++++|||+|.|++||+|+|++++...... ... .....+...++.+ +..+.++||||||
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~l~~~~kPvIA 111 (276)
T 2j5i_A 40 EMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDA--GPE------ILQEKIRREASQWQWKLLRMYAKPTIA 111 (276)
T ss_dssp HHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHH--SCT------THHHHHHHHHHHHHTTTTTTCSSCEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhcccc--chh------HHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999999999999987431100 000 0011122223343 6778999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 112 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~l~ltg~~~~A~eA~~~GLv~~ 190 (276)
T 2j5i_A 112 MVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGH-RQSLMYIMTGKTFGGQKAAEMGLVNE 190 (276)
T ss_dssp EECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCH-HHHHHHHHHCCEEEHHHHHHHTSSSE
T ss_pred EECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCH-HHHHHHHHhCCcccHHHHHHcCCccE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcc--cCCc-hHHhccccccccc-cCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNG--CDRR-NCNKGVSPERMSH-DCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~--~~~~-~~~e~~~~~~~~~-~sp 235 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+....... +.++ |++|++.++..+| +.|
T Consensus 191 vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr~r~p 269 (276)
T 2j5i_A 191 SVPL-AQLREVTIELARNLLEKNPVVLRAAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDKSIKP 269 (276)
T ss_dssp EECH-HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred eeCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcccCCC
Confidence 9997 899999999999999999999999999999998888988888776554333 5678 9999999999877 556
|
| >2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=333.88 Aligned_cols=217 Identities=26% Similarity=0.404 Sum_probs=196.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++..... .. ..+...+ +++.++.++||||||+
T Consensus 36 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------~~-------~~~~~~~-~~~~~l~~~~kPvIAa 101 (258)
T 2pbp_A 36 EIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDP------IR-------LEWLNQF-ADWDRLSIVKTPMIAA 101 (258)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCH------HH-------HHHHCTT-HHHHHHHTCCSCEEEE
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccc------hh-------HHHHHHH-HHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 00 1111223 5577889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .+++++++||++++|+||+++||||++
T Consensus 102 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 180 (258)
T 2pbp_A 102 VNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGP-KRALEWLWTGARMSAKEAEQLGIVNRV 180 (258)
T ss_dssp ECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHTTSCSEE
T ss_pred EcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCH-HHHHHHHHcCCccCHHHHHHcCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+
T Consensus 181 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 252 (258)
T 2pbp_A 181 VSP-ELLMEETMRLAGRLAEQPPLALRLIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRK 252 (258)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSC
T ss_pred eCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCC
Confidence 997 899999999999999999999999999999988889999999988888888899999999999988664
|
| >4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=346.60 Aligned_cols=223 Identities=22% Similarity=0.344 Sum_probs=196.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++||+|||||+| ++||+|+|++++..... ........++...+.++..|.++||||||
T Consensus 40 ~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~kPvIA 110 (353)
T 4hdt_A 40 TMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAK---------ADGAEARRFWFDEYRLNAHIGRYPKPYVS 110 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHH---------TTSHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccc---------hhhHHHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 478899999999999999999999 89999999999864321 01122345666778889999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .++++|++||++++|+||+++||||+
T Consensus 111 av~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g--~~a~~l~ltG~~i~A~eA~~~GLv~~ 188 (353)
T 4hdt_A 111 IMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG--KLGLHAALTGAPFSGADAIVMGFADH 188 (353)
T ss_dssp EECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST--THHHHHHHHCCCBCHHHHHHHTSCSE
T ss_pred EeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh--HHHHHHHhcCCCCCHHHHHHcCCCcE
Confidence 9999999999999999999999999999999999999999999999999998 37999999999999999999999999
Q ss_pred ccCChhHHHHHHHHH-------------------------------------------------------HHHHhcCCHH
Q psy14406 160 LYDDKESLLAGAIEL-------------------------------------------------------GELIASKSPV 184 (275)
Q Consensus 160 vv~~~~~l~~~a~~~-------------------------------------------------------a~~la~~~~~ 184 (275)
|||+ ++|.+.+.++ ++.|++.+|.
T Consensus 189 vv~~-~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~~L~~~~~~~a~~~a~~la~~sP~ 267 (353)
T 4hdt_A 189 YVPH-DKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIAALRAHDAPAAGEAADLIATRSPI 267 (353)
T ss_dssp ECCG-GGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHHHHHHHCSHHHHHHHHHHTTSCHH
T ss_pred EeCH-HHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHHHHHhcccHHHHHHHHHHHhcCcH
Confidence 9997 8888877655 4558899999
Q ss_pred HHHHHHHHHHhhhcC-CHHHHHHHHHHHhhcccCCchHHhccccccc-cccCC
Q psy14406 185 AVQGTKKTLVFSRDH-AVEEGLNQVDKESKNGCDRRNCNKGVSPERM-SHDCP 235 (275)
Q Consensus 185 a~~~~K~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~-~~~sp 235 (275)
+++.+|+.+++.... ++++.++.+.........++|++||+.+++. .++.|
T Consensus 268 a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P 320 (353)
T 4hdt_A 268 ALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNP 320 (353)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CC
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCC
Confidence 999999999998775 7999999999999989999999999999873 23445
|
| >2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=332.64 Aligned_cols=218 Identities=22% Similarity=0.304 Sum_probs=179.5
Q ss_pred CHHHHHHHhhhCCCceEEEEee-CCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSA-AGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g-~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|+++++|||+| .|++||+|+|++++..... .+ ....+...+++++.++.++||||||
T Consensus 31 ~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~-----~~------~~~~~~~~~~~~~~~i~~~~kPvIA 99 (250)
T 2a7k_A 31 SVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSR-----SE------DIEEWIDRVIDLYQAVLNVNKPTIA 99 (250)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-C-----HH------HHHHHHHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCc-----hh------hHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 4788999999999999999999 8999999999998754211 00 0123344567788899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++ +|++++|+ .+++++++||++++|+||+++||||+
T Consensus 100 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~ 177 (250)
T 2a7k_A 100 AVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGF-STMQEIIYQCQSLDAPRCVDYRLVNQ 177 (250)
T ss_dssp EECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCH-HHHHHHHHHCCCBCHHHHHHHTCCSE
T ss_pred EECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHH-HHHHHHHHcCCcccHHHHHHcCCcce
Confidence 99999999999999999999999999999999999999999999 99999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|
T Consensus 178 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr 249 (250)
T 2a7k_A 178 VVES-SALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKK 249 (250)
T ss_dssp EECH-HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------
T ss_pred ecCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 9997 89999999999999999999999999999988777888888888888777889999999999988765
|
| >3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-47 Score=334.00 Aligned_cols=221 Identities=20% Similarity=0.308 Sum_probs=186.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.++.|++||+|||+|.|++||+|+|++++........ ........+...++.++.++.++||||||+
T Consensus 37 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 110 (263)
T 3l3s_A 37 ALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPD------EGRAFVTDLFEACSALMLDLAHCPKPTIAL 110 (263)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----C------CSHHHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccc------ccHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999999864310000 001223455667788999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++ ++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 111 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG~-~~A~~l~ltg~~~~A~eA~~~GLv~~v 188 (263)
T 3l3s_A 111 VEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIGR-RAVTEMALTGATYDADWALAAGLINRI 188 (263)
T ss_dssp ESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSCH-HHHHHHHHHCCEEEHHHHHHHTSSSEE
T ss_pred ECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcCH-HHHHHHHHcCCCCCHHHHHHCCCccEE
Confidence 9999999999999999999999999999999999999 57789999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 230 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..
T Consensus 189 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~ 257 (263)
T 3l3s_A 189 LPE-AALATHVADLAGALAARNQAPLRRGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEG 257 (263)
T ss_dssp CCH-HHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHC-------------
T ss_pred eCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhc
Confidence 997 899999999999999999999999999999999889999999999988889999999999988764
|
| >2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-47 Score=336.77 Aligned_cols=219 Identities=23% Similarity=0.320 Sum_probs=197.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.++.|+++++|||+|.|++||+|+|++++..... . .....+...+++++.++.++||||||+
T Consensus 64 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-----~------~~~~~~~~~~~~~~~~l~~~~kPvIAa 132 (287)
T 2vx2_A 64 SLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQG-----R------DYHAEVFQTCSKVMMHIRNHPVPVIAM 132 (287)
T ss_dssp HHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGC-----H------HHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccc-----h------hHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 0 112234455677888999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|+++ |++++|. .++++|++||++++|+||+++||||++
T Consensus 133 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~-~~A~~llltg~~i~A~eA~~~GLv~~v 210 (287)
T 2vx2_A 133 VNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPR-KVALEMLFTGEPISAQEALLHGLLSKV 210 (287)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhH-HHHHHHHHhCCCCCHHHHHHCCCccee
Confidence 99999999999999999999999999999999999999999999 9999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+
T Consensus 211 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~ 282 (287)
T 2vx2_A 211 VPE-AELQEETMRIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRK 282 (287)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSC
T ss_pred cCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCC
Confidence 997 899999999999999999999999999999988889999999888887788899999999999987654
|
| >1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=331.37 Aligned_cols=221 Identities=24% Similarity=0.353 Sum_probs=196.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++++|||+|.|++||+|+|++++...... . .. . ... ....+++++.++.++||||||+
T Consensus 30 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~--~~--~--~~~-~~~~~~~~~~~i~~~~kPvIAa 100 (253)
T 1uiy_A 30 SLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTEL--G--AE--E--NYR-HSLSLMRLFHRVYTYPKPTVAA 100 (253)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTS--C--HH--H--HHH-HHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccC--C--ch--h--HHH-HHHHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999987532100 0 00 0 011 1111567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++| +++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 101 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 178 (253)
T 1uiy_A 101 VNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGE-KAAKDLLLTGRLVEAREAKALGLVNRI 178 (253)
T ss_dssp ECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCH-HHHHHHHHHCCEEEHHHHHHHTSCSEE
T ss_pred ECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCH-HHHHHHHHhCCccCHHHHHHCCCccee
Confidence 99999999999999999999999999999999999999999 9999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+
T Consensus 179 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~ 250 (253)
T 1uiy_A 179 APP-GKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRP 250 (253)
T ss_dssp ECT-TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSC
T ss_pred cCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCC
Confidence 997 899999999999999999999999999999998889999999988888888899999999999987653
|
| >2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=334.44 Aligned_cols=221 Identities=18% Similarity=0.276 Sum_probs=185.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++ +|||+|.|++||+|+|++++..... .+.. .....+...+++++.++.++||||||+
T Consensus 57 ~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~l~~~~kPvIAa 127 (280)
T 2f6q_A 57 EIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPP-----GGVE---EKAKNNAVLLREFVGCFIDFPKPLIAV 127 (280)
T ss_dssp HHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCT-----THHH---HHHHHHHHHHHHHHHHHHSCCSCEEEE
T ss_pred HHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCc-----chhh---HHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478899999999999 9999999999999999998754221 0100 011223344567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. .++++|++||++++|+||+++||||++
T Consensus 128 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltg~~~~A~eA~~~GLv~~v 206 (280)
T 2f6q_A 128 VNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSP-AKATEMLIFGKKLTAGEACAQGLVTEV 206 (280)
T ss_dssp ECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCH-HHHHHHHTTCCCEEHHHHHHTTSCSEE
T ss_pred ECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCcceE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
+|+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|
T Consensus 207 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR 277 (280)
T 2f6q_A 207 FPD-STFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 277 (280)
T ss_dssp ECT-TTHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC---------
T ss_pred ECH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccC
Confidence 997 89999999999999999999999999999988776788888888887778889999999999998865
|
| >4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=338.85 Aligned_cols=220 Identities=28% Similarity=0.387 Sum_probs=186.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh---cCCCcE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLE---RCPKPV 77 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~kP~ 77 (275)
||.++|+++++|++|++|||+|.|++||+|+|++++..... . ..... ...++.++..+. ++||||
T Consensus 51 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------~-----~~~~~-~~~~~~~~~~l~~~~~~~kPv 118 (278)
T 4f47_A 51 IMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPP------G-----DSFKD-GSYDPSRIDALLKGRRLKKPL 118 (278)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCCC----------------------------------CTTCBTTTTBSCCCSSCE
T ss_pred HHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccch------h-----hhHHH-HHHHHHHHHHHHHhcCCCCCE
Confidence 47889999999999999999999999999999998854211 0 00000 112234455666 999999
Q ss_pred EEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 78 ISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 78 Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++|||
T Consensus 119 IAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~a~~l~ltg~~~~a~eA~~~GLv 197 (278)
T 4f47_A 119 IAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPY-TVACDLLLTGRHITAAEAKEMGLV 197 (278)
T ss_dssp EEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCH-HHHHHHHHHCCCEEHHHHHHTTSC
T ss_pred EEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHCCCc
Confidence 9999999999999999999999999999999999999999999999999999995 999999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 158 SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
|+++|+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+.
T Consensus 198 ~~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p 273 (278)
T 4f47_A 198 GHVVPD-GQALTKALEIAEIIAANGPLAVQAILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKP 273 (278)
T ss_dssp SEEECT-TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCC
T ss_pred eEeeCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCC
Confidence 999998 8999999999999999999999999999999998899999999999888899999999999999987653
|
| >3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-48 Score=344.45 Aligned_cols=229 Identities=24% Similarity=0.296 Sum_probs=158.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++..... .. ... ........+...++.++..+.++||||||+
T Consensus 61 ~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 136 (298)
T 3qre_A 61 GFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAG-YD--KTM-AKAKDANLADLVGERPPHFVTMLRKPVIAA 136 (298)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------------------------CCTTGGGGSSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhccc-cc--ccc-ccchhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998853100 00 000 000001112223456678899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|+ .++++|++||++++|+||+++||||+|
T Consensus 137 V~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~ellltg~~i~A~eA~~~GLV~~v 215 (298)
T 3qre_A 137 INGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSW-AVALDLLLSGRTFLAEEAAQLGLVKEV 215 (298)
T ss_dssp ECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHSCH-HHHHHHHHHCCEEEHHHHHHTTSCSEE
T ss_pred ECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhcCH-HHHHHHHHcCCCCCHHHHHHcCCCeEe
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASK-SPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~-~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
||. +++.+++.+++++|+.. ||.+++.+|+.++.....++++.+..+...+...+.++|++|++.+++.+|+..
T Consensus 216 v~~-~~l~~~a~~~A~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~ 290 (298)
T 3qre_A 216 VTP-EQLMPRALEYAEDIARYCSPSSMAVIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQ 290 (298)
T ss_dssp ECG-GGHHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGGC------------------------------------
T ss_pred cCH-HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 997 89999999999999998 999999999999999888999988888887777889999999999999877543
|
| >1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=333.58 Aligned_cols=217 Identities=29% Similarity=0.425 Sum_probs=194.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++++|||+|.|++||+|+|++++..... . ......+...+.++.++||||||+
T Consensus 38 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------~--------~~~~~~~~~~~~~l~~~~kPvIAa 103 (260)
T 1mj3_A 38 ELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTF------Q--------DCYSGKFLSHWDHITRIKKPVIAA 103 (260)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCH------H--------HHHHC--CCGGGGGGGCSSCEEEE
T ss_pred HHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccc------h--------HHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998743211 0 001112223366788999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 104 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 182 (260)
T 1mj3_A 104 VNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGK-SLAMEMVLTGDRISAQDAKQAGLVSKI 182 (260)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHcCCccEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+|+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+
T Consensus 183 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~ 254 (260)
T 1mj3_A 183 FPV-ETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRK 254 (260)
T ss_dssp ECT-TTHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSC
T ss_pred eCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCC
Confidence 997 899999999999999999999999999999998889999999988888888899999999999987654
|
| >3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-48 Score=341.11 Aligned_cols=221 Identities=24% Similarity=0.284 Sum_probs=196.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL-ERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~kP~Ia 79 (275)
+|.++|++++.|++|++|||+|.|+.||+|+|++++...... . ...+...+++++.++ .++||||||
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-----~-------~~~~~~~~~~~~~~l~~~~~kPvIA 107 (265)
T 3swx_A 40 ELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQG-----G-------ASLTPEGGINPWQVDGRQLSKPLLV 107 (265)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--------------CCCCCTTCCCTTCCSSCCCSSCEEE
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccc-----h-------hHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999999999999988542110 0 000111223445677 899999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 108 av~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~ 186 (265)
T 3swx_A 108 AVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGW-GNAMRWMLTADTFDAVEAHRIGIVQE 186 (265)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCH-HHHHHHHTTCCCEEHHHHHHTTSCSE
T ss_pred EEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhH-HHHHHHHHcCCcCCHHHHHHcCCCCE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+..
T Consensus 187 vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 261 (265)
T 3swx_A 187 IVPV-GEHVDTAIAIAQTIARQAPLGVQATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAE 261 (265)
T ss_dssp EEST-TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCC
T ss_pred ecCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCC
Confidence 9998 88999999999999999999999999999999888999999999888888899999999999999877543
|
| >3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-47 Score=333.78 Aligned_cols=217 Identities=27% Similarity=0.360 Sum_probs=191.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHH-HHHHh-h--cCCCc
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK-SISSL-E--RCPKP 76 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-~--~~~kP 76 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++ .. .. .. ...+...++. ++..+ . ++|||
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~---~~----~~-------~~~~~~~~~~~~~~~l~~~~~~~kP 104 (265)
T 3rsi_A 40 QFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DG---WM----VR-------DGSAPPLDPATIGKGLLLSHTLTKP 104 (265)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSEECC-----------------------------CCCHHHHHHHTTSSCCCSSC
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-cc---cc----cc-------hHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 4788999999999999999999999999999998 21 10 00 0122223345 67888 8 99999
Q ss_pred EEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCC
Q psy14406 77 VISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL 156 (275)
Q Consensus 77 ~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GL 156 (275)
|||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||
T Consensus 105 vIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GL 183 (265)
T 3rsi_A 105 LIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPY-TKAMEMILTGEPLTAFEAYHFGL 183 (265)
T ss_dssp EEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCH-HHHHHHHHHCCCEEHHHHHHTTS
T ss_pred EEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999995 99999999999999999999999
Q ss_pred cccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 157 VSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 157 v~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
||+++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 184 v~~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p 260 (265)
T 3rsi_A 184 VGHVVPA-GTALDKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREA 260 (265)
T ss_dssp CSEEEST-TCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCC
T ss_pred ccEecCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCC
Confidence 9999998 8999999999999999999999999999999988899999999998888889999999999999887643
|
| >1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-47 Score=332.21 Aligned_cols=218 Identities=19% Similarity=0.191 Sum_probs=192.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeC-CCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAA-GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~-G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|++++.|+++++|||+|. |++||+|+|++++..... + ....+...+++++.++.++||||||
T Consensus 35 ~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~------~------~~~~~~~~~~~~~~~l~~~~kPvIA 102 (260)
T 1sg4_A 35 ELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSP------A------HYAGYWKAVQELWLRLYQSNLVLVS 102 (260)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCH------H------HHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCH------H------HHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 47889999999999999999999 699999999998753211 0 1123344567788999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEe--CCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 80 AVHGACIGGGMSLITAADIRYAT--KDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~--~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
+|||+|+|||++|+++||+||++ ++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++|||
T Consensus 103 av~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~llltg~~~~a~eA~~~GLv 181 (260)
T 1sg4_A 103 AINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGH-RAAERALQLGLLFPPAEALQVGIV 181 (260)
T ss_dssp EECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCH-HHHHHHHHHTCCBCHHHHHHHTSS
T ss_pred EECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHcCCC
Confidence 99999999999999999999999 899999999999999999999999999995 899999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 158 SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
|+++|. +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|
T Consensus 182 ~~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr 255 (260)
T 1sg4_A 182 DQVVPE-EQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERL 255 (260)
T ss_dssp SEEECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC-----
T ss_pred CEecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence 999987 89999999999999999999999999999988766777778877777777889999999999998765
|
| >3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=334.81 Aligned_cols=219 Identities=24% Similarity=0.316 Sum_probs=190.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++........ .. ......++.++.++.++||||||+
T Consensus 36 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~--~~--------~~~~~~~~~~~~~l~~~~kPvIAa 105 (266)
T 3fdu_A 36 WIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN--AG--------PAGQVPPFVLLKSAARLSKPLIIA 105 (266)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC--CS--------CGGGSHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc--hh--------hHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999999862111000 00 011223456788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 106 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~l~ltg~~i~A~eA~~~GLv~~v 184 (266)
T 3fdu_A 106 VKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGY-HKAAELLFTAKKFNAETALQAGLVNEI 184 (266)
T ss_dssp ECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCH-HHHHHHHHHCCEECHHHHHHTTSCSEE
T ss_pred ECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCH-HHHHHHHHhCCCcCHHHHHHCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+| ++.+++.+++++|+..||.+++.+|+.++... .++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 185 v~---~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p 254 (266)
T 3fdu_A 185 VE---DAYATAQATAQHLTALPLASLKQTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQP 254 (266)
T ss_dssp CS---CHHHHHHHHHHHHHTSCHHHHHHHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC-----
T ss_pred HH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCC
Confidence 98 69999999999999999999999999999876 478888888888888889999999999999987743
|
| >4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=330.34 Aligned_cols=205 Identities=23% Similarity=0.348 Sum_probs=188.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++..... .....+...++.++.++.++||||||+
T Consensus 54 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~kPvIAa 121 (277)
T 4di1_A 54 EIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNA------------PEADTAARVRLEAIDAVAAIPKPTVAA 121 (277)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCH------------HHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccCh------------HHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999999864321 112344556778899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 122 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~-~~A~~llltG~~i~A~eA~~~GLV~~v 200 (277)
T 4di1_A 122 VTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGS-SRAKELVFSGRFFDAEEALALGLIDDM 200 (277)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRR 219 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 219 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++
T Consensus 201 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~ 258 (277)
T 4di1_A 201 VAP-DDVYDSAVAWARRYLECPPRALAAAKAVINDVFELEATERAAAERRRYVELFAAG 258 (277)
T ss_dssp ECG-GGHHHHHHHHHHTTTTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG
T ss_pred eCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc
Confidence 997 8999999999999999999999999999999999899999999988887777775
|
| >2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=335.54 Aligned_cols=223 Identities=20% Similarity=0.347 Sum_probs=192.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+. ++|||+|.|++||+|+|++++..... .+ .......+...++.++.++.++||||||+
T Consensus 55 ~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 125 (291)
T 2fbm_A 55 EIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLR-----NN---RNTASLEMVDTIKNFVNTFIQFKKPIVVS 125 (291)
T ss_dssp HHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHH-----HC---HHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhccc-----cc---chhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999998875 99999999999999999998753110 00 00112233445667788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. .++++|++||++++|+||+++||||+|
T Consensus 126 V~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~-~~A~el~ltg~~i~A~eA~~~GLV~~v 204 (291)
T 2fbm_A 126 VNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK-ASANEMLIAGRKLTAREACAKGLVSQV 204 (291)
T ss_dssp ECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH-HHHHHHHTSCCEEEHHHHHHTTSCSEE
T ss_pred ECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhH-HHHHHHHHcCCccCHHHHHHCCCccee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccc-cccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPE-RMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~-~~~~~sp 235 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++ +.+| .|
T Consensus 205 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR-~P 278 (291)
T 2fbm_A 205 FLT-GTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGY-KA 278 (291)
T ss_dssp ECS-TTSHHHHHHHHHHHTTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC--------
T ss_pred cCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCC-CC
Confidence 997 8999999999999999999999999999998877678888888888777888999999999999 7654 45
|
| >2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-47 Score=332.30 Aligned_cols=221 Identities=22% Similarity=0.356 Sum_probs=194.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+. ++|||+|.|++||+|+|++++..... .+ .......+...++.++..+.++||||||+
T Consensus 37 ~L~~al~~~~~d~~-r~vvltg~g~~F~aG~Dl~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 107 (261)
T 2gtr_A 37 EVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLT-----DD---RKRESTKMAEAIRNFVNTFIQFKKPIIVA 107 (261)
T ss_dssp HHHHHHHHHHHSSC-SCEEEEESSSCSBCEECHHHHHHHHH-----HC---HHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHhcCCC-EEEEEecCCCccccccCchhhhhccc-----cc---hhhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47789999998874 99999999999999999998753111 00 00112233445667788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. .++++|++||++++|+||+++||||++
T Consensus 108 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 186 (261)
T 2gtr_A 108 VNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGG-ASANEMLLSGRKLTAQEACGKGLVSQV 186 (261)
T ss_dssp ECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHTTSCSEE
T ss_pred ECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCH-HHHHHHHHcCCCCCHHHHHHCCCcccc
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|
T Consensus 187 v~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr 257 (261)
T 2gtr_A 187 FWP-GTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRK 257 (261)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHH
T ss_pred cCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccC
Confidence 997 89999999999999999999999999999988776788888888777777788999999999998765
|
| >3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=331.09 Aligned_cols=222 Identities=23% Similarity=0.281 Sum_probs=193.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++..... ..........+...++.++.++.++||||||+
T Consensus 42 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 114 (267)
T 3oc7_A 42 QLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGS-------PSSAYDMAVERAREMAALMRAIVESRLPVIAA 114 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECSSEEECCBC------------------CHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccC-------chhhhhhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998751110 00000112345566788899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+ ++|+ .++++|++||++++|+||+++||||++
T Consensus 115 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 192 (267)
T 3oc7_A 115 IDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSA-RAAARYYLTGEKFDARRAEEIGLITMA 192 (267)
T ss_dssp ECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCH-HHHHHHHHHCCCBCHHHHHHHTSSSEE
T ss_pred EcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCH-HHHHHHHHcCCccCHHHHHHCCChhhh
Confidence 99999999999999999999999999999999999999999999999 9995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
. +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 193 --~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p 263 (267)
T 3oc7_A 193 --A-EDLDAAIDQLVTDVGRGSPQGLAASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSP 263 (267)
T ss_dssp --C-SSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCC
T ss_pred --h-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCC
Confidence 4 6899999999999999999999999999999888789999999988888889999999999999987643
|
| >3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-48 Score=340.16 Aligned_cols=215 Identities=26% Similarity=0.347 Sum_probs=165.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL-ERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~kP~Ia 79 (275)
+|.++|++++.|++||+|||+|.|+.||+|+|++++........ ..+...+++++.++ .++||||||
T Consensus 43 ~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~~~kPvIA 110 (258)
T 3lao_A 43 DLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASG------------FRYPDGGVDPWGVVQPRRSKPLVV 110 (258)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTB------------CCCCTTCCCTTSCSSSCCCSCEEE
T ss_pred HHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhh------------HHHHHHHHHHHHHHHHhCCCCEEE
Confidence 47889999999999999999999999999999999865322100 01112233456778 899999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 111 av~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltg~~~~a~eA~~~Glv~~ 189 (258)
T 3lao_A 111 AVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGW-TDAMRYILTGDEFDADEALRMRLLTE 189 (258)
T ss_dssp EECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCH-HHHHHHHTTCCCEEHHHHHHTTSCSE
T ss_pred EECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCCcE
Confidence 99999999999999999999999999999999999999999999999999995 99999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPER 229 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~ 229 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++
T Consensus 190 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 190 VVEP-GEELARALEYAERIARAAPLAVRAALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp EECT-TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-------------------------------
T ss_pred eeCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 9998 89999999999999999999999999999999888999999999888888889999999998763
|
| >3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=336.37 Aligned_cols=216 Identities=24% Similarity=0.281 Sum_probs=178.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++++|++||+|||+|.|++||+|+|++++...... .. . ......++..+.++||||||+
T Consensus 42 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-----~~-------~--~~~~~~~~~~~~~~~kPvIAa 107 (262)
T 3r9q_A 42 ALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGN-----EL-------H--PHGPGPMGPSRLRLSKPVIAA 107 (262)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSC-----CC-------C--TTSSCTTSSTTCCCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChh-----hH-------H--HhhhhHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999998643210 00 0 000112334567899999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 108 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltG~~~~A~eA~~~GLv~~v 186 (262)
T 3r9q_A 108 ISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGH-SRAMDLILTGRPVHANEALDIGLVNRV 186 (262)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHTTSCSEE
T ss_pred ECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+.. ....+.+ |++||+.++..+++.
T Consensus 187 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p 257 (262)
T 3r9q_A 187 VAR-GQAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGR 257 (262)
T ss_dssp ECT-TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC----------------
T ss_pred cCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCC
Confidence 998 8999999999999999999999999999999998899999998877 6667777 999999999887643
|
| >3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=338.79 Aligned_cols=223 Identities=20% Similarity=0.266 Sum_probs=194.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++||+|||+|.| ++||+|+|++++...... .+. ......+...++.++.++.++||||||
T Consensus 39 ~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~l~~~~kPvIA 111 (287)
T 3gkb_A 39 ELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDAL----QEL---AASAPADVNVFQAVGELIRHQPQVTIV 111 (287)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHH----HHH---HHTSCTTCCTTHHHHHHHHHCSSEEEE
T ss_pred HHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhcccc----chh---hHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999 899999999998532110 000 000112233456788899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeC-CceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATK-DAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~-~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~ 158 (275)
+|||+|+|||++|+++||+||+++ +++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||
T Consensus 112 aV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~-~~A~ellltG~~i~A~eA~~~GLV~ 190 (287)
T 3gkb_A 112 KLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR-NRALEVVLTADLFDAETAASYGWIN 190 (287)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSSS
T ss_pred EECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCCc
Confidence 999999999999999999999999 99999999999999999999999999995 9999999999999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc-CC
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD-CP 235 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~-sp 235 (275)
++||+ +++.+++.+++++|+..||.+++.+|+.++.. ...+.++.+...+...+.++|++|++.+++.+|+ .|
T Consensus 191 ~vv~~-~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~~~P 264 (287)
T 3gkb_A 191 RALPA-DELDEYVDRVARNIAALPDGVIEAAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGAQTP 264 (287)
T ss_dssp EEECH-HHHHHHHHHHHHHHHTSCTTHHHHHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTTTSH
T ss_pred EEeCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Confidence 99997 89999999999999999999999999999874 3457888888888888899999999999999874 45
|
| >1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-46 Score=330.36 Aligned_cols=219 Identities=26% Similarity=0.428 Sum_probs=196.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+.++.|+++++|||+|.| ++||+|+|++++..... . ....+...+++++.++.++||||||
T Consensus 43 ~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-----~-------~~~~~~~~~~~~~~~l~~~~kPvIA 110 (272)
T 1hzd_A 43 MLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-----S-------EVGPFVSKIRAVINDIANLPVPTIA 110 (272)
T ss_dssp HHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH-----H-------HHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh-----H-------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999998 79999999998753211 0 1123344567788899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 111 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~ 189 (272)
T 1hzd_A 111 AIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGM-SLAKELIFSARVLDGKEAKAVGLISH 189 (272)
T ss_dssp EESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHTCEEEHHHHHHHTSCSE
T ss_pred EeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHCCCcce
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 160 LYDDKES----LLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 160 vv~~~~~----l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
++|+ ++ +.+.+.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+
T Consensus 190 vv~~-~~l~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~ 266 (272)
T 1hzd_A 190 VLEQ-NQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRP 266 (272)
T ss_dssp EECC-CTTSCHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSC
T ss_pred ecCh-hhhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCC
Confidence 9997 55 4557889999999999999999999999998889999999988888888899999999999987654
|
| >3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=337.59 Aligned_cols=226 Identities=23% Similarity=0.392 Sum_probs=192.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.++.|++|++|||+|.|++||+|+|++++........ + .........+..++.++.++.++||||||+
T Consensus 42 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 116 (274)
T 3tlf_A 42 ELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIY---E--RPYLSTYDQWEAPQEGTPPFRTMAKPVLTA 116 (274)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTEEECCBC-------------------CTTCSGGGGSCCCTTCCCTTSCCSCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhcccccc---c--cchhhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998854211000 0 000000011123455677899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCC--CCCHHHHHHcCCcc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTAR--KIEAAEARECGLVS 158 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~--~~~a~eA~~~GLv~ 158 (275)
|||+|+|||++|+++||+||++++++|++||+++|++| .|++++|++++|+ .++++|++||+ +++|+||+++||||
T Consensus 117 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~-~~A~~l~ltg~~~~~~A~eA~~~GLv~ 194 (274)
T 3tlf_A 117 VNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPR-SIALRMALMGKHERMSAQRAYELGLIS 194 (274)
T ss_dssp ECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCH-HHHHHHHHHGGGCCEEHHHHHHHTSSS
T ss_pred ECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCH-HHHHHHHHcCCCCccCHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999 9999999999995 89999999999 99999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+.
T Consensus 195 ~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p 269 (274)
T 3tlf_A 195 EIVEH-DRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQP 269 (274)
T ss_dssp EEECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCC
T ss_pred eecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCC
Confidence 99997 8999999999999999999999999999999998899999999998888889999999999999876643
|
| >3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-48 Score=340.99 Aligned_cols=220 Identities=22% Similarity=0.324 Sum_probs=196.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++++|++|++|||+|.|++||+|+|++++....... . ..++.. +.++.++.++||||||+
T Consensus 38 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~----~--------~~~~~~-~~~~~~l~~~~kPvIAa 104 (265)
T 3qxz_A 38 QLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAP----R--------NPDFSA-SPVQPAAFELRTPVIAA 104 (265)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCC----C--------SSCCCS-CCSSSCGGGSSSCEEEE
T ss_pred HHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchh----H--------HHHHHH-HHHHHHHHhCCCCEEEE
Confidence 4788999999999999999999999999999999876432100 0 001112 45677899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 105 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~A~~l~ltg~~~~A~eA~~~GLv~~v 183 (265)
T 3qxz_A 105 VNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGT-AVAAELLLTGASFSAQRAVETGLANRC 183 (265)
T ss_dssp ECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHH-HHHHHHHHHCCCBCHHHHHHHTSCSEE
T ss_pred ECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHCCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhcCCHHHH--HHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 161 YDDKESLLAGAIELGELIASK-SPVAVQGTKKTLVFSRDHAVEEG--LNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~-~~~a~~~~K~~l~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+|+ +++.+++.+++++|+.. ||.+++.+|+.++.....++++. ++.+...+...+.++|++|++.++..+|+..
T Consensus 184 v~~-~~l~~~a~~~a~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~ 260 (265)
T 3qxz_A 184 LPA-GKVLGAALRMAHDIATNVAPESAALTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPR 260 (265)
T ss_dssp ECH-HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCC
T ss_pred eCH-HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCC
Confidence 997 89999999999999999 99999999999999887788888 8888888888889999999999999876543
|
| >3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=329.04 Aligned_cols=211 Identities=22% Similarity=0.315 Sum_probs=173.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++||+|||+|.|++||+|+|++++... ..++.+...+.++||||||+
T Consensus 40 ~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~---------------------~~~~~~~~~l~~~~kPvIAa 98 (256)
T 3pe8_A 40 TFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDT---------------------TELPDISPKWPDMTKPVIGA 98 (256)
T ss_dssp HHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC------------------------------CCCCCCCSSCEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhh---------------------HHHHHHHHHHHhCCCCEEEE
Confidence 478899999999999999999999999999999987421 01223346788999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 99 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 177 (256)
T 3pe8_A 99 INGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGV-GLARRMSLTGDYLSAQDALRAGLVTEV 177 (256)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSCE
T ss_pred ECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCH-HHHHHHHHcCCCCCHHHHHHCCCCeEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhh---cccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESK---NGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|. +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+. ....++|++|++..++.++++
T Consensus 178 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~ 253 (256)
T 3pe8_A 178 VAH-DDLLTAARRVAASIVGNNQKAVRALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRS 253 (256)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------------
T ss_pred eCH-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCc
Confidence 997 8999999999999999999999999999999888888998888877643 346778889999999987754
|
| >3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=327.16 Aligned_cols=214 Identities=29% Similarity=0.411 Sum_probs=192.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++++|+++|+|||+|.|++||+|+|++++...... .. . . .+ . +..+ .+||||||+
T Consensus 38 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~----~~---~----~----~~-~-~~~~-~~~kPvIAa 99 (256)
T 3trr_A 38 GLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAV----LS---E----R----GL-G-FTNV-PPRKPIIAA 99 (256)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCC----EE---T----T----EE-T-TSSS-CCSSCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccch----hh---h----h----hh-h-HHHh-cCCCCEEEE
Confidence 478899999999999999999999999999999988542110 00 0 0 00 1 2334 889999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 100 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 178 (256)
T 3trr_A 100 VEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPY-QVAMELALTGESFTAEDAAKYGFINRL 178 (256)
T ss_dssp ECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCH-HHHHHHHHHCCCEEHHHHGGGTCCSEE
T ss_pred ECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCH-HHHHHHHHhCCCcCHHHHHHCCCeeEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+.
T Consensus 179 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p 251 (256)
T 3trr_A 179 VDD-GQALDTALELAAKITANGPLAVAATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAP 251 (256)
T ss_dssp ECT-TCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCC
T ss_pred cCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCC
Confidence 998 8999999999999999999999999999999998899999999998888889999999999999986643
|
| >3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=332.81 Aligned_cols=218 Identities=18% Similarity=0.231 Sum_probs=194.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCC-CcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGK-IFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~-~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+.++.|++||+|||+|.|+ +||+|+|++++..... +. ......+...++.++.++.++||||||
T Consensus 38 ~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~------~~---~~~~~~~~~~~~~~~~~l~~~~kPvIA 108 (289)
T 3h0u_A 38 DLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTA------EA---AKAGGPGDASLGMLFRKLSQLPAVTIA 108 (289)
T ss_dssp HHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHH------HH---HTTSSTTCCSHHHHHHHHHTCSSEEEE
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCc------ch---hhhHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 4788999999999999999999995 5566779999854211 00 000002234567788999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~ 158 (275)
+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||
T Consensus 109 aV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~-~~A~ellltG~~i~A~eA~~~GLV~ 187 (289)
T 3h0u_A 109 KLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGR-GRALEAVLTSSDFDADLAERYGWVN 187 (289)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSSS
T ss_pred EECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCcc
Confidence 9999999999999999999999998 9999999999999999999999999995 9999999999999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccc
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM 230 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 230 (275)
++||+ +++.+++.+++++|+..||.+++.+|+.++.... ++++.++.+...+...+.++|++|++.+++.
T Consensus 188 ~vv~~-~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 188 RAVPD-AELDEFVAGIAARMSGFPRDALIAAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp EEECH-HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred EecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 99997 8999999999999999999999999999999888 8999999998888889999999999998887
|
| >3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=330.10 Aligned_cols=222 Identities=23% Similarity=0.250 Sum_probs=185.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++||+|||+|.| ++||+|+|++++...... .+ ........++.++.++.++||||||
T Consensus 59 ~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~----~~------~~~~~~~~~~~~~~~l~~~~kPvIA 128 (289)
T 3t89_A 59 EMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGY----KD------DSGVHHLNVLDFQRQIRTCPKPVVA 128 (289)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC--------------------------CTHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccc----hh------hhHHHHHHHHHHHHHHHcCCCCEEE
Confidence 478899999999999999999999 699999999987432110 00 0011112345678889999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 129 aV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~-~~A~~llltG~~i~A~eA~~~GLV~~ 207 (289)
T 3t89_A 129 MVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQ-KKAREIWFLCRQYDAKQALDMGLVNT 207 (289)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSSSE
T ss_pred EECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCH-HHHHHHHHcCCcccHHHHHHCCCceE
Confidence 99999999999999999999999999999999999988888889999999995 99999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCP 235 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp 235 (275)
+||+ +++.+++.+++++|+..||.+++.+|+.++.... ......+.+.......+.++|++||+.+++.+|+..
T Consensus 208 vv~~-~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~ 281 (289)
T 3t89_A 208 VVPL-ADLEKETVRWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPD 281 (289)
T ss_dssp EECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCC
T ss_pred eeCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCC
Confidence 9997 8999999999999999999999999999998764 333333444445556788999999999999877543
|
| >4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-46 Score=328.05 Aligned_cols=221 Identities=23% Similarity=0.220 Sum_probs=185.0
Q ss_pred CHHHHHHHhhhCCCceEEEEee-----CC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy14406 1 EIGECFDSLSENEECRVIILSA-----AG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCP 74 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g-----~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 74 (275)
||.++|++++.|++||+|||+| .| ++||+|+|++++..... .+. .......++.++..+.++|
T Consensus 41 ~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~-----~~~------~~~~~~~~~~~~~~l~~~~ 109 (275)
T 4eml_A 41 ELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGY-----IDD------QGTPRLNVLDLQRLIRSMP 109 (275)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC-------------------------CCCHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccc-----cch------hhHHHHHHHHHHHHHHhCC
Confidence 4788999999999999999999 89 69999999998753110 000 0001112456788899999
Q ss_pred CcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHc
Q psy14406 75 KPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEAREC 154 (275)
Q Consensus 75 kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~ 154 (275)
|||||+|||+|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+ .++++|++||++++|+||+++
T Consensus 110 kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG~-~~A~~llltg~~i~A~eA~~~ 188 (275)
T 4eml_A 110 KVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQ-KKAREIWYLCRQYSAQEAERM 188 (275)
T ss_dssp SEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHH
T ss_pred CCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhHH-HHHHHHHHhCCCcCHHHHHHc
Confidence 9999999999999999999999999999999999999999999998889999999995 999999999999999999999
Q ss_pred CCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 155 GLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 155 GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
||||+++|+ +++.+++.+++++|+..||.+++.+|+.++.... ......+.+.......+.++|++|++.++..+|+.
T Consensus 189 GLv~~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p 266 (275)
T 4eml_A 189 GMVNTVVPV-DRLEEEGIQWAKEILSKSPLAIRCLKAAFNADCD-GQAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPP 266 (275)
T ss_dssp TSCSEEECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCC
T ss_pred CCccEeeCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCC
Confidence 999999997 8999999999999999999999999999998764 33333344444455567899999999999997754
Q ss_pred C
Q psy14406 235 P 235 (275)
Q Consensus 235 p 235 (275)
.
T Consensus 267 ~ 267 (275)
T 4eml_A 267 D 267 (275)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-47 Score=333.12 Aligned_cols=219 Identities=25% Similarity=0.372 Sum_probs=191.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+++++|++||+|||+|.| ++||+|+|++++....... .. . ...+ ....+ ...++||||||
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~----~~-~----~~~~---~~~~~-~~~~~~kPvIA 106 (267)
T 3r9t_A 40 GVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLY----HP-D----HPEW---GFAGY-VRHFIDKPTIA 106 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCS----CT-T----CGGG---CGGGT-TTCCCSSCEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchh----hH-H----HHhH---HHHHH-HHHhCCCCEEE
Confidence 478899999999999999999999 6999999999986432100 00 0 0000 00111 22389999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 107 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~l~ltg~~i~A~eA~~~GLv~~ 185 (267)
T 3r9t_A 107 AVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPR-KVAMRLLLTGEPLSAAAARDWGLINE 185 (267)
T ss_dssp EECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCH-HHHHHHHHHCCCEEHHHHHHHTSSSE
T ss_pred EECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCH-HHHHHHHHcCCCCCHHHHHHCCCccE
Confidence 99999999999999999999999999999999999999999999999999995 99999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHH---HHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKT---LVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~---l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+||+ +++.+++.+++++|+..||.+++.+|+. ++.....++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 186 vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P 262 (267)
T 3r9t_A 186 VVEA-GSVLDAALALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREP 262 (267)
T ss_dssp EECT-TCHHHHHHHHHHHHHTSCHHHHHHHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCC
T ss_pred EcCh-hHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCC
Confidence 9998 8999999999999999999999999999 888888789999999988888889999999999999987643
|
| >3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=331.11 Aligned_cols=214 Identities=29% Similarity=0.372 Sum_probs=186.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS-ISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++....... .. . +.+ +..+.. ||||||
T Consensus 46 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~----~~------~-------~~~~~~~~~~-~kPvIA 107 (265)
T 3qxi_A 46 ALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVV----VE------G-------RGLGFTERPP-AKPLIA 107 (265)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCE----ET------T-------TEETTTTSCC-SSCEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhh----hh------h-------hhhhHHHhhC-CCCEEE
Confidence 4788999999999999999999999999999999875422100 00 0 011 233344 999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 108 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~ 186 (265)
T 3qxi_A 108 AVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPY-AIAMELALTGDNLSAERAHALGMVNV 186 (265)
T ss_dssp EECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCH-HHHHHHHHHCCCEEHHHHHHTTSCSE
T ss_pred EECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCH-HHHHHHHHcCCCcCHHHHHHCCCccE
Confidence 99999999999999999999999999999999999999999999999999995 99999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+||+ +++.+++.+++++|+..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+.
T Consensus 187 vv~~-~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p 260 (265)
T 3qxi_A 187 LAEP-GAALDAAIALAEKITANGPLAVAATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPP 260 (265)
T ss_dssp EECT-TCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCC
T ss_pred eeCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCC
Confidence 9998 8999999999999999999999999999999988899999999888888888999999999999987643
|
| >1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=329.98 Aligned_cols=217 Identities=24% Similarity=0.390 Sum_probs=192.0
Q ss_pred CHHHHHHHhhhCCCceEEEEee-CC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEE
Q psy14406 1 EIGECFDSLSENEECRVIILSA-AG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVI 78 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g-~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~I 78 (275)
||.++|++++.|+ +++|||+| .| ++||+|+|++++..... .. ..+...+++++.++.++|||||
T Consensus 35 ~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~-----~~--------~~~~~~~~~~~~~l~~~~kPvI 100 (261)
T 1ef8_A 35 DLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGR-----DP--------LSYDDPLRQITRMIQKFPKPII 100 (261)
T ss_dssp HHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC----------CT--------TCTTSHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCc-----hh--------HHHHHHHHHHHHHHHhCCCCEE
Confidence 4788999999999 99999999 99 99999999998753211 00 0011234667888999999999
Q ss_pred EEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcc
Q psy14406 79 SAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 79 a~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~ 158 (275)
|+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. .+++++++||++++|+||+++||||
T Consensus 101 Aav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~ 179 (261)
T 1ef8_A 101 SMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGF-HIVKELIFTASPITAQRALAVGILN 179 (261)
T ss_dssp EEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCH-HHHHHHHHHCCCEEHHHHHHTTSCS
T ss_pred EEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCccCHHHHHHCCCcc
Confidence 999999999999999999999999999999999999999999999999999995 8999999999999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhh--cccCCchHHhcccccccccc
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESK--NGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~e~~~~~~~~~~ 233 (275)
+++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+...+. ..+.++|++|++.+++.+|+
T Consensus 180 ~vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~ 255 (261)
T 1ef8_A 180 HVVEV-EELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRK 255 (261)
T ss_dssp EEECH-HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSC
T ss_pred cccCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCC
Confidence 99996 8999999999999999999999999999999877788888888777766 77889999999999997654
|
| >3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=327.99 Aligned_cols=221 Identities=16% Similarity=0.166 Sum_probs=189.9
Q ss_pred CHHHHHHHhhh-----CCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh---hc
Q psy14406 1 EIGECFDSLSE-----NEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL---ER 72 (275)
Q Consensus 1 el~~~l~~~~~-----d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~ 72 (275)
||.++|++++. |++|++|||+|.|++||+|+||+++...... ........+...+...+..+ ..
T Consensus 67 eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~ 138 (305)
T 3m6n_A 67 DITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIRE--------GDRARLLDYAQRCVRGVHAFHVGLG 138 (305)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHHhcccc--------ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46788888887 5899999999999999999999998643210 00011222333333344433 56
Q ss_pred CCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHH
Q psy14406 73 CPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEAR 152 (275)
Q Consensus 73 ~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~ 152 (275)
+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++|++||++++|+||+
T Consensus 139 ~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~llltG~~i~A~eA~ 217 (305)
T 3m6n_A 139 ARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISA-HLAQKIMLEGNLYSAEQLL 217 (305)
T ss_dssp TTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCH-HHHHHHHHHCCEEEHHHHH
T ss_pred CCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccHHHHHHHHhcH-HHHHHHHHcCCCCCHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999995 9999999999999999999
Q ss_pred HcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 153 ECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 153 ~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++||||++||+ +++.+++.+++++|+. +|.+++.+|+.++.....++++.++.+..++...+.++|...++.....+.
T Consensus 218 ~~GLv~~vv~~-~~l~~~a~~~a~~la~-~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~ 295 (305)
T 3m6n_A 218 GMGLVDRVVPR-GQGVAAVEQVIRESKR-TPHAWAAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRA 295 (305)
T ss_dssp HHTSCSEEECT-TCHHHHHHHHHHHHTT-CHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HCCCCCEecCh-hHHHHHHHHHHHHHhh-ChHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 99999999998 8999999999999986 899999999999999999999999999999999999988877765555543
|
| >3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=336.58 Aligned_cols=230 Identities=21% Similarity=0.225 Sum_probs=164.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCC-------CcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGK-------IFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERC 73 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~-------~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 73 (275)
||.++|+.++.|++|++|||||.|+ +||+|+|++++......... ................++.++..|.++
T Consensus 88 eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ 166 (334)
T 3t8b_A 88 ELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYAS-GDTADTVDVARAGRLHILEVQRLIRFM 166 (334)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC-----------------------CCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcccccccc-cccchhhhHHHHHHHHHHHHHHHHHhC
Confidence 4788999999999999999999995 89999999986421110000 000000001111222345678889999
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEe-CCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHH
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYAT-KDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEAR 152 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~ 152 (275)
||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|++|. .++++|++||++++|+||+
T Consensus 167 ~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~vG~-~~A~ellltG~~i~A~eA~ 245 (334)
T 3t8b_A 167 PKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQ-KFAREIFFLGRTYTAEQMH 245 (334)
T ss_dssp SSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSSCCSCHHHHHHHHHH-HHHHHHHHHCCEEEHHHHH
T ss_pred CCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCCcccHHHHHHHHhhH-HHHHHHHHhCCcCCHHHHH
Confidence 99999999999999999999999999999 999999999999999999999999999995 9999999999999999999
Q ss_pred HcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 153 ECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 153 ~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++||||+|||. +++.+++.++|++|+..+|.+++.+|+.++.... .+.+.+..+...+...+.++|++||+.+++.+|
T Consensus 246 ~~GLV~~vv~~-~~l~~~a~~~A~~ia~~~p~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR 323 (334)
T 3t8b_A 246 QMGAVNAVAEH-AELETVGLQWAAEINAKSPQAQRMLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKR 323 (334)
T ss_dssp HHTSCSEEECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCC-CC-------------------------------
T ss_pred HCCCCcEecCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCC
Confidence 99999999997 8999999999999999999999999999998765 344444444445556678999999999999877
Q ss_pred cC
Q psy14406 233 DC 234 (275)
Q Consensus 233 ~s 234 (275)
+.
T Consensus 324 ~P 325 (334)
T 3t8b_A 324 PP 325 (334)
T ss_dssp --
T ss_pred CC
Confidence 53
|
| >3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=338.38 Aligned_cols=227 Identities=19% Similarity=0.258 Sum_probs=196.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+.++.|++|++|||+|.| ++||+|+|++++...... ...........++...+.++.+|.++||||||
T Consensus 73 ~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIA 147 (407)
T 3ju1_A 73 AMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVA-----AKGQVTEVAKVFFEEEYRLDYLLHTYGKPVLV 147 (407)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHH-----HTSSCCHHHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccc-----cccccHHHHHHHHHHHHHHHHHHHHCCCCEEE
Confidence 478899999999999999999999 899999999998642110 00000012345566667889999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .++++|++||++++|+||+++||||+
T Consensus 148 aVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g--~~A~~l~ltG~~i~A~eA~~~GLv~~ 225 (407)
T 3ju1_A 148 WGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG--KMGLFLGLTAYHMNAADACYVGLADH 225 (407)
T ss_dssp ECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST--THHHHHHHHCCCBCHHHHHHHTSCSE
T ss_pred EECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH--HHHHHHHHcCCcCcHHHHHHCCCccE
Confidence 9999999999999999999999999999999999999999999999999999 58999999999999999999999999
Q ss_pred ccCChhHHHH---H----------------HHH-----------------------------------------------
Q psy14406 160 LYDDKESLLA---G----------------AIE----------------------------------------------- 173 (275)
Q Consensus 160 vv~~~~~l~~---~----------------a~~----------------------------------------------- 173 (275)
+||+ +++.+ + +.+
T Consensus 226 vv~~-~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~~~I~~~f~~sv~~i~~~L~~~~~~~ 304 (407)
T 3ju1_A 226 YLNR-DDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQEMIDRLMAGSLTDIVTRMSTLSTDE 304 (407)
T ss_dssp ECCG-GGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTHHHHHHHTCSCHHHHHHHHHHCCCSC
T ss_pred EcCH-HHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHHHHHHHHhcCCHHHHHHHHHhccccc
Confidence 9997 77766 3 322
Q ss_pred -H----HHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc-cCC
Q psy14406 174 -L----GELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH-DCP 235 (275)
Q Consensus 174 -~----a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~-~sp 235 (275)
| +++|+..+|.+++.+|+.++.....++++.++.+.......+.++|++||+.++++.| +.|
T Consensus 305 ~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGvrAflidKdr~P 372 (407)
T 3ju1_A 305 AWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAKGDFCEGVRALLIDKDKQP 372 (407)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHSSHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCcCC
Confidence 1 4789999999999999999999999999999999998888889999999999998544 677
|
| >2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=325.69 Aligned_cols=209 Identities=19% Similarity=0.318 Sum_probs=187.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+++++|||+|.|++||+|+|++++..... .. . ..++++.++.++||||||+
T Consensus 34 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----~~-------~-----~~~~~~~~l~~~~kPvIAa 96 (243)
T 2q35_A 34 GLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTR-----GE-------V-----EVLDLSGLILDCEIPIIAA 96 (243)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHT-----TC-------C-----CCCCCHHHHHTCCSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccc-----hh-------h-----HHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999988743110 00 0 1245677889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .+++++++||++++|+||+++||||++
T Consensus 97 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~a~~l~ltg~~~~a~eA~~~GLv~~v 175 (243)
T 2q35_A 97 MQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGS-ELAQEMIYTGENYRGKELAERGIPFPV 175 (243)
T ss_dssp ECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHTTCSSCE
T ss_pred EcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCCCEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPE 228 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~ 228 (275)
+|+ +++.+++.+++++++..+|.+++.+|+.++.....++++.++.+.......+.++|++|++.++
T Consensus 176 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~ 242 (243)
T 2q35_A 176 VSR-QDVLNYAQQLGQKIAKSPRLSLVALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQE 242 (243)
T ss_dssp ECH-HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTT
T ss_pred cCh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhc
Confidence 997 8999999999999999999999999999998877778888888877777778899999988653
|
| >2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=323.93 Aligned_cols=219 Identities=23% Similarity=0.283 Sum_probs=186.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCC-CcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGK-IFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~-~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|++++.|++|++|||+|.|+ +||+|+|++++..... .. . .... ...++.++..+.++||||||
T Consensus 44 ~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~-----~~--~--~~~~--~~~~~~~~~~l~~~~kPvIA 112 (273)
T 2uzf_A 44 EMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGY-----VG--E--DQIP--RLNVLDLQRLIRIIPKPVIA 112 (273)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC-------------C--C--SSSC--CCTHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhcccc-----ch--h--hhHH--HhhHHHHHHHHHhCCCCEEE
Confidence 4788999999999999999999998 9999999998743100 00 0 0000 00134567788899999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 113 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~ 191 (273)
T 2uzf_A 113 MVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGH-KKAREIWYLCRQYNAQEALDMGLVNT 191 (273)
T ss_dssp EECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCH-HHHHHHHHTCCCEEHHHHHHHTSSSE
T ss_pred EECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCH-HHHHHHHHhCCCCCHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHH-HHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVD-KESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++|. +++.+++.+++++|+..+|.+++.+|+.++. ..++++.++.+. ..+...+.++|++|++.++..+|+.
T Consensus 192 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~--~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p 264 (273)
T 2uzf_A 192 VVPL-EKVEDETVQWCKEIMKHSPTALRFLKAAMNA--DTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDP 264 (273)
T ss_dssp EECG-GGSHHHHHHHHHHHTTSCHHHHHHHHHHHHH--HHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCC
T ss_pred ccCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHc--cCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCC
Confidence 9997 8999999999999999999999999999983 346788888777 6666778899999999999886543
|
| >3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=324.14 Aligned_cols=219 Identities=18% Similarity=0.186 Sum_probs=186.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.| +||+|||+|.|++||+|+|++++.....+.. . ...+...++.++.++.++||||||+
T Consensus 38 ~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~---~-------~~~~~~~~~~~~~~l~~~~kPvIAa 106 (267)
T 3hp0_A 38 ECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGR---K-------QASSQEPLYDLWMKLQTGPYVTISH 106 (267)
T ss_dssp HHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTC---C-------SCCCCHHHHHHHHHHHHSSSEEEEE
T ss_pred HHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChH---H-------HHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478899999886 6999999999999999999999864321000 0 0112334567788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++| +++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 107 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~-~~A~ellltg~~i~A~eA~~~GLV~~v 184 (267)
T 3hp0_A 107 VRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGR-QKAHYMTLMTKPISVQEASEWGLIDAF 184 (267)
T ss_dssp ECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCH-HHHHHHHHHCCCBCHHHHHHHTSSSCB
T ss_pred ECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCccee
Confidence 99999999999999999999999999999999999999885 6789999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCCc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCPE 236 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp~ 236 (275)
+|+ .+ ..+.+++++|+..||.+++.+|+.++.... .+++.++.+...+...+.++|++||+.++..+|+.+.
T Consensus 185 v~~-~~--~~~~~~a~~la~~~p~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~ 256 (267)
T 3hp0_A 185 DAE-SD--VLLRKHLLRLRRLNKKGIAHYKQFMSSLDH-QVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPW 256 (267)
T ss_dssp CSC-TT--HHHHHHHHHHTTSCHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC--
T ss_pred cCC-HH--HHHHHHHHHHHhCCHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCC
Confidence 986 32 347789999999999999999999998654 5677777777777788899999999999999876553
|
| >3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=318.13 Aligned_cols=197 Identities=22% Similarity=0.260 Sum_probs=177.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++++++| ++|+|||+|.|++||+|+|++++..... .....+...+++++.++.++||||||+
T Consensus 35 ~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~kPvIAa 101 (233)
T 3r6h_A 35 ALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEA------------KPAIDMLRGGFELSYRLLSYPKPVVIA 101 (233)
T ss_dssp HHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---C------------HHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccCh------------HHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 477899999887 6999999999999999999999854211 112345566778899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+ .+++++++||++++|+||+++||||++
T Consensus 102 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~-~~a~~l~ltg~~~~a~eA~~~Glv~~v 180 (233)
T 3r6h_A 102 CTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTP-SAYQQAAGLAKTFFGETALAAGFIDEI 180 (233)
T ss_dssp ECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCH-HHHHHHHHSCCEECHHHHHHHTSCSEE
T ss_pred ECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCH-HHHHHHHHcCCcCCHHHHHHcCCCcEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHh
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKES 212 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~ 212 (275)
+|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+..++
T Consensus 181 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~f 231 (233)
T 3r6h_A 181 SLP-EVVLSRAEEAAREFAGLNQQAHNATKLRARAEALKAIRAGIDGIEAEF 231 (233)
T ss_dssp CCG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHTTHHHHHHHHHHHHTSHHHH
T ss_pred eCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 997 899999999999999999999999999999988878888888877664
|
| >3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=336.49 Aligned_cols=223 Identities=25% Similarity=0.368 Sum_probs=192.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|+.++.|++|++|||+|.| ++||+|+|++++...... . .. ....++..++.++.++.++||||||
T Consensus 37 ~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~--~-~~------~~~~~~~~~~~~~~~l~~~~kPvIA 107 (363)
T 3bpt_A 37 QIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKA--K-QK------IAPVFFREEYMLNNAVGSCQKPYVA 107 (363)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTS--S-CC------CHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhccc--c-cH------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999998 999999999987532100 0 00 0112333445678899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. ++++|++||++++|+||+++||||+
T Consensus 108 av~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~--~a~~l~ltg~~i~A~eA~~~GLv~~ 185 (363)
T 3bpt_A 108 LIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK--LGYFLALTGFRLKGRDVYRAGIATH 185 (363)
T ss_dssp EECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT--HHHHHHHHCCCEETHHHHHTTSCSE
T ss_pred EECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH--HHHHHHHcCCCCCHHHHHHCCCcce
Confidence 99999999999999999999999999999999999999999999999999994 8999999999999999999999999
Q ss_pred ccCChhHHHHHH---------------------------------------------------H---------------H
Q psy14406 160 LYDDKESLLAGA---------------------------------------------------I---------------E 173 (275)
Q Consensus 160 vv~~~~~l~~~a---------------------------------------------------~---------------~ 173 (275)
+||+ +++.+.+ . +
T Consensus 186 vv~~-~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~ei~~al~~~~~~~a~~ 264 (363)
T 3bpt_A 186 FVDS-EKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALE 264 (363)
T ss_dssp ECCG-GGHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHHTTSSSHHHHHHHHHHHCCHHHHH
T ss_pred ecCH-HHHHHHHHHHHhcccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHHhCCCCHHHHHHHHhccChHHHHH
Confidence 9997 7775431 2 5
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccc-cccCC
Q psy14406 174 LGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERM-SHDCP 235 (275)
Q Consensus 174 ~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~-~~~sp 235 (275)
++++|++.+|.+++.+|+.++.....++++.++.+.......+.++|++||+.+++. +++.|
T Consensus 265 ~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl~eK~r~P 327 (363)
T 3bpt_A 265 QLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVLIDKDQSP 327 (363)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhheeeCCCCCC
Confidence 788999999999999999999998889999999988887778899999999999995 43667
|
| >3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=319.75 Aligned_cols=208 Identities=24% Similarity=0.363 Sum_probs=179.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+++++| +||+|||+|.|++||+|+|++..... ..+...++.++.++.++||||||+
T Consensus 52 ~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~~-----------------~~~~~~~~~~~~~l~~~~kPvIAa 113 (264)
T 3he2_A 52 ELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFA-----------------ADYPDRLIELHKAMDASPMPVVGA 113 (264)
T ss_dssp HHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTTG-----------------GGHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchhh-----------------HHHHHHHHHHHHHHHhCCCCEEEE
Confidence 477889999988 99999999999999999999842110 112334567788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|+ .++++|++||++++|+||+++||||++
T Consensus 114 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~-~~A~~llltG~~i~A~eA~~~GLV~~v 192 (264)
T 3he2_A 114 INGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGH-GRARAMLLSAEKLTAEIALHTGMANRI 192 (264)
T ss_dssp ECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCH-HHHHHHHHcCCCccHHHHHHCCCeEEE
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++. +++.+++++|+..||.+++.+|+.++... ++++.++.+...+...+.++|++|++.++..+|+.
T Consensus 193 ~~~-----~~a~~~A~~la~~~p~a~~~~K~~l~~~~--~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P 259 (264)
T 3he2_A 193 GTL-----ADAQAWAAEIARLAPLAIQHAKRVLNDDG--AIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPP 259 (264)
T ss_dssp CCH-----HHHHHHHHHHHTSCHHHHHHHHHHHHTSS--CSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCC
T ss_pred ecH-----HHHHHHHHHHHcCCHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCC
Confidence 862 57889999999999999999999999862 34455555666666678999999999999987754
|
| >2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=318.74 Aligned_cols=207 Identities=23% Similarity=0.312 Sum_probs=181.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|++|++|||+|.|++||+|+|++++..... .+ ....++..++.++.++.++||||||+
T Consensus 55 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-----~~------~~~~~~~~~~~~~~~l~~~~kPvIAa 123 (263)
T 2j5g_A 55 EFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTN-----PR------EWDKTYWEGKKVLQNLLDIEVPVISA 123 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTS-----HH------HHHHHHHHHHHHHHHHHTCCSCEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCC-----HH------HHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999998753211 00 11223344567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEec-cccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTL-KEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~-pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+ ||++|+++||+||++++++|++ ||+++|++|++|++++|++++|+ .++++|++||++++|+||+++||||+
T Consensus 124 v~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~-~~A~~llltG~~~~A~eA~~~GLv~~ 201 (263)
T 2j5g_A 124 VNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGL-YRGRYFLFTQEKLTAQQAYELNVVHE 201 (263)
T ss_dssp ECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHH-HHHHHHHHTTCCEEHHHHHHTTSCSE
T ss_pred ECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCH-HHHHHHHHcCCCCCHHHHHHCCCccE
Confidence 999999 5999999999999999999999 99999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.+..+.. .||+.++..+|
T Consensus 202 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~-----------~eg~~af~~~~ 262 (263)
T 2j5g_A 202 VLPQ-SKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYGLA-----------LEGITATDLRN 262 (263)
T ss_dssp EECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHTTC
T ss_pred ecCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHHHH-----------HhhHHHHHhcc
Confidence 9997 8999999999999999999999999999998876667776666543 38888887765
|
| >3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=311.50 Aligned_cols=194 Identities=20% Similarity=0.262 Sum_probs=175.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|+ ++|||+|.|++||+|+|++++... . ....++...++.++.++.++||||||+
T Consensus 36 ~L~~al~~~~~d~--~~vvltg~g~~F~aG~Dl~~~~~~-~------------~~~~~~~~~~~~~~~~l~~~~kPvIAa 100 (232)
T 3ot6_A 36 AFNAALDQAEKDR--AIVIVTGQPGILSGGYDLKVMTSS-A------------EAAINLVAQGSTLARRMLSHPFPIIVA 100 (232)
T ss_dssp HHHHHHHHHHHTT--CEEEEECBTEEEECCBCHHHHHHC-H------------HHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHhcCC--CEEEEECCCCCccCCcCHHHHhhC-h------------HHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4778899998764 899999999999999999988531 1 112345566778899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+|||++|+++||+||++++ ++|++||+++|++|+.++++++++++|+ .+++++++||++++|+||+++||||+
T Consensus 101 v~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~-~~a~~l~ltg~~i~A~eA~~~GLv~~ 179 (232)
T 3ot6_A 101 CPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRK-SAFNRSVINAEMFDPEGAMAAGFLDK 179 (232)
T ss_dssp CCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCH-HHHHHHHTSCCEECHHHHHHHTSCSE
T ss_pred ECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCH-HHHHHHHHcCCccCHHHHHHCCCCCE
Confidence 999999999999999999999998 8999999999999888888999999995 99999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHH
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~ 211 (275)
+||+ +++.+++.+++++|++.||.+++.+|+.++.....++++.++.+...
T Consensus 180 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~ 230 (232)
T 3ot6_A 180 VVSV-EELQGAALAVAAQLKKINMNAHKKTKLKVRKGLLDTLDAAIEQDRQH 230 (232)
T ss_dssp EECT-TTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHh
Confidence 9997 89999999999999999999999999999999887888888887654
|
| >1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=318.10 Aligned_cols=195 Identities=21% Similarity=0.314 Sum_probs=164.8
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhh-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAE-QEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++|++++.|++|++|||+|.|++||+|+|++++......... .... .......++..++.++.++.++||||||
T Consensus 40 ~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~kPvIA 117 (280)
T 1pjh_A 40 YLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSE--TSKWVSNFVARNVYVTDAFIKHSKVLIC 117 (280)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSH--HHHHHHHTHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhhh--HHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 478899999999999999999999999999999987532110000 0000 0001122334456778899999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEe-CCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcc
Q psy14406 80 AVHGACIGGGMSLITAADIRYAT-KDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~ 158 (275)
+|||+|+|||++|+++||+||++ ++++|++||+++|++|++|++++|++++|. .++++|++||++++|+||+++||||
T Consensus 118 av~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~vG~-~~A~~llltg~~~~a~eA~~~GLv~ 196 (280)
T 1pjh_A 118 CLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGT-NTTYECLMFNKPFKYDIMCENGFIS 196 (280)
T ss_dssp EECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCH-HHHHHHHHTTCCEEHHHHHHTTCCS
T ss_pred EECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHHhCH-HHHHHHHHhCCCCCHHHHHHCCCcc
Confidence 99999999999999999999999 999999999999999999999999999995 8999999999999999999999999
Q ss_pred cccCCh----hHHHHHHH-HHHHHHhcCCHHHHHHHHHHHHhhhc
Q psy14406 159 KLYDDK----ESLLAGAI-ELGELIASKSPVAVQGTKKTLVFSRD 198 (275)
Q Consensus 159 ~vv~~~----~~l~~~a~-~~a~~la~~~~~a~~~~K~~l~~~~~ 198 (275)
++||+. +++.+++. +++++|+..||.+++.+|+.++....
T Consensus 197 ~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~~~K~~l~~~~~ 241 (280)
T 1pjh_A 197 KNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHI 241 (280)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTH
T ss_pred eeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhHH
Confidence 999973 27888885 99999999999999999999987653
|
| >3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=313.49 Aligned_cols=209 Identities=19% Similarity=0.258 Sum_probs=178.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+.+++ +++|+|||+|.|++||+|+|++++..... . .....+..++.++.++.++||||||+
T Consensus 38 ~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------~------~~~~~~~~~~~~~~~l~~~~kPvIAa 104 (254)
T 3isa_A 38 ALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSE------G------DLLLRMVRIEMLLQRVAGSPSLTLAL 104 (254)
T ss_dssp HHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCH------H------HHHHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred HHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCc------h------hHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47788999976 59999999999999999999999864321 0 01122345677889999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++| ++++|++++|. .++++|++||++++|+||+++||||++
T Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~-~~A~~l~ltg~~~~a~eA~~~GLv~~v 180 (254)
T 3isa_A 105 AHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGA-DQALSILGSARAFDADEARRIGFVRDC 180 (254)
T ss_dssp ECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCH-HHHHHHHTTTCEEEHHHHHHTTSSSEE
T ss_pred ECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCH-HHHHHHHHhCCCCcHHHHHHCCCccEE
Confidence 99999999999999999999999999999999999998 36899999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+ +++.+++.+++++++..||.+++.+|+.++.. .++ .+...+...+.++|++|++.+++.+|+.
T Consensus 181 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~---~~~----~e~~~~~~~~~s~d~~egi~af~ekr~p 246 (254)
T 3isa_A 181 AAQ-AQWPALIDAAAEAATALDPATRATLHRVLRDD---HDD----ADLAALARSAAQPGFKARIRDYLAQPAA 246 (254)
T ss_dssp CCG-GGHHHHHHHHHHHHTTSCHHHHHHHHHHHSCC---CHH----HHHHHHHHHHHSTTHHHHHHHHHHC---
T ss_pred eCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHhhh---hHH----HHHHHHHHHhCCHHHHHHHHHHHhcCCC
Confidence 997 89999999999999999999999999998532 333 2333444567889999999999987643
|
| >3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=321.07 Aligned_cols=248 Identities=20% Similarity=0.244 Sum_probs=187.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhH---------HHHH---------HHHHHHHHHHH
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE---------DVAR---------KSKILRKLITT 62 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~---------~~~~---------~~~~~~~~~~~ 62 (275)
||.++|+.++.|++||+|||+|.|++||+|+||+++........... .... .......++..
T Consensus 66 eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (333)
T 3njd_A 66 ELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSR 145 (333)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhcccccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 47889999999999999999999999999999999854321000000 0000 00012344566
Q ss_pred HHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhc
Q psy14406 63 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFT 142 (275)
Q Consensus 63 ~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~lt 142 (275)
++.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+.| +|++++|+ .++++|++|
T Consensus 146 ~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~f~~pe~~lG~~P~~g---~l~~~vG~-~~A~elllt 221 (333)
T 3njd_A 146 FVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGD-QRAKRLLFT 221 (333)
T ss_dssp HHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEECGGGGTTCCCTTC---CHHHHHCH-HHHHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCeeechhhceeccCHHH---HHHHHHHH-HHHHHHHhc
Confidence 77788899999999999999999999999999999999999999999999999999876 58999995 999999999
Q ss_pred CCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcC-CHHHHHHHHHHHhhcccCCchH
Q psy14406 143 ARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDH-AVEEGLNQVDKESKNGCDRRNC 221 (275)
Q Consensus 143 G~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 221 (275)
|++++|+||+++||||+|||. +++.+++.++|++|+..||.+++.+|+.++...+. .+.............
T Consensus 222 G~~i~A~eA~~~GLV~~vv~~-~~l~~~a~~lA~~ia~~~~~al~~~K~~l~~~~~~~~~~~~~~~~~~~~~~------- 293 (333)
T 3njd_A 222 GDCITGAQAAEWGLAVEAPDP-ADLDARTERLVERIAAMPVNQLIMAKLACNTALLNQGVATSQMVSTVFDGI------- 293 (333)
T ss_dssp CCEEEHHHHHHTTSSSBCCCG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH-------
T ss_pred CCCCCHHHHHHCCCccEecCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH-------
Confidence 999999999999999999997 89999999999999999999999999999988653 343331111111000
Q ss_pred HhccccccccccCCcchhhHHHHHhccCccChHHHHHHHHHhhcccccCCCC
Q psy14406 222 NKGVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDLALLFGGKHRCDPE 273 (275)
Q Consensus 222 ~e~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (275)
.+..+. .-...++.+...+++++++++-+|+|+.|..++
T Consensus 294 ---------~~~~~e----~~~f~~~~~~~g~~a~~ekR~~~f~~~~~~~~~ 332 (333)
T 3njd_A 294 ---------ARHTPE----GHAFVATAREHGFREAVRRRDEPMGDHGRRASD 332 (333)
T ss_dssp ---------HTTSHH----HHHHHHHHHHHCHHHHHHHHHGGGTCCTTCCCC
T ss_pred ---------HhcChH----HHHHHHHhhhHHHHHHHHhcCCCCCCcccCCCC
Confidence 111121 111222333448999999999999999887764
|
| >1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=313.78 Aligned_cols=195 Identities=24% Similarity=0.323 Sum_probs=173.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++++|||+|.|++||+|+|++++..... + ....+...+++++.++.++||||||+
T Consensus 47 ~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------~------~~~~~~~~~~~~~~~l~~~~kPvIAa 114 (257)
T 1szo_A 47 ELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTP------H------DWDEIIFEGQRLLNNLLSIEVPVIAA 114 (257)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSH------H------HHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCH------H------HHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 47889999999999999999999999999999998742110 0 01223344567788899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEec-cccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTL-KEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~-pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+ ||++|+++||+||++++++|++ ||+++|++|+.|++++|++++|+ .+++++++||++++|+||+++||||+
T Consensus 115 v~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~-~~A~~llltG~~~~A~eA~~~GLv~~ 192 (257)
T 1szo_A 115 VNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGS-NRGRYFLLTGQELDARTALDYGAVNE 192 (257)
T ss_dssp ECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCH-HHHHHHHHTTCEEEHHHHHHHTSCSE
T ss_pred ECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCH-HHHHHHHHcCCCCCHHHHHHCCCceE
Confidence 999999 5999999999999999999999 99999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDK 210 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~ 210 (275)
++|+ +++.+++.+++++|+..||.+++.+|+.++.....++++.++.+..
T Consensus 193 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~~~~ 242 (257)
T 1szo_A 193 VLSE-QELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGLA 242 (257)
T ss_dssp EECH-HHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred EeCh-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHHHH
Confidence 9996 8999999999999999999999999999998877677777766543
|
| >3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=306.53 Aligned_cols=200 Identities=28% Similarity=0.374 Sum_probs=166.1
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|++++.|+++++|||+|.|++||+|+|++++....... . ...........+++++.++.++||||||+
T Consensus 51 ~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 123 (279)
T 3t3w_A 51 ELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKL----T---LEFIYAHESRRYLEYSLRWRNVPKPSIAA 123 (279)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------C----C---HHHHHHHHHHHTHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhccccc----c---hHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4788999999999999999999999999999999885432100 0 00112223345567788999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++ +.++.. +++++|+ .++++|++||++++|+||+++||||++
T Consensus 124 v~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~-~~~~~~-~~~~vG~-~~A~~llltG~~i~A~eA~~~GLv~~v 200 (279)
T 3t3w_A 124 VQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIG-GVEYHG-HTWELGP-RKAKEILFTGRAMTAEEVAQTGMVNRV 200 (279)
T ss_dssp ECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCS-SCSSCC-HHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCCC-CchHHH-HHhhcCH-HHHHHHHHcCCccCHHHHHHCCCCcEe
Confidence 9999999999999999999999999999999999994 444443 3999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcC-CHHHHHHHHHHH
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDH-AVEEGLNQVDKE 211 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~l~~~~~~ 211 (275)
||+ +++.+++.+++++|+..||.+++.+|+.++...+. ++++.++.+...
T Consensus 201 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~ 251 (279)
T 3t3w_A 201 VPR-DRLDAETRALAGEIAKMPPFALRQAKRAVNQTLDVQGFYAAIQSVFDI 251 (279)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred eCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcccHHHHHHHHhhH
Confidence 997 89999999999999999999999999999987653 677776665543
|
| >3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=331.13 Aligned_cols=213 Identities=21% Similarity=0.340 Sum_probs=191.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|++|++|||||+|++||+|+||+++...... ..++.++.+|.++||||||+
T Consensus 51 ~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~------------------~~~~~~~~~i~~~~kPvIAa 112 (742)
T 3zwc_A 51 EVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG------------------LALGSLVDEIQRYQKPVLAA 112 (742)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC------------------SHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh------------------HHHHHHHHHHHhCCCCEEEE
Confidence 578899999999999999999999999999999998654321 01345677889999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|. .++++|++||++++|+||+++||||+|
T Consensus 113 i~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~-~~A~~l~ltG~~i~a~eA~~~GLv~~v 191 (742)
T 3zwc_A 113 IQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGV-PVALDLITSGKYLSADEALRLGILDAV 191 (742)
T ss_dssp ECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred ECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhH-HHHHHHHHcCCchhHHHHHHcCCccEe
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCH----------------------------------HHHHHHHHHHHhhhcCCHHHHHH
Q psy14406 161 YDDKESLLAGAIELGELIASKSP----------------------------------VAVQGTKKTLVFSRDHAVEEGLN 206 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~----------------------------------~a~~~~K~~l~~~~~~~~~~~l~ 206 (275)
+++ +. .+++.++|++++..++ .+...+++.++.+...++++.+.
T Consensus 192 v~~-d~-~~~A~~~A~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~A~~~~~~~v~~~~~~~~~~gl~ 269 (742)
T 3zwc_A 192 VKS-DP-VEEAIKFAQKIIDKPIEPRRIFNKPVPSLPNMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIK 269 (742)
T ss_dssp ESS-CH-HHHHHHHHHHHTTSCSGGGCGGGSCCCCCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred cCc-hh-hHHHHHHHHHHhcCCchhhhhhcccccccchhhhhHHHHHHHHhhhccchhHHHHHHHHHHHHhhCCHHHHHH
Confidence 986 54 5788999999998764 46777888899998899999999
Q ss_pred HHHHHhhcccCCchHHhccccccccccC
Q psy14406 207 QVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 207 ~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
.|...+.....+++.++++..|...|+.
T Consensus 270 ~E~~~F~~l~~s~~~k~~~~aFf~~r~~ 297 (742)
T 3zwc_A 270 EEEKLFMYLRASGQAKALQYAFFAEKSA 297 (742)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999998887766543
|
| >2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=313.88 Aligned_cols=218 Identities=22% Similarity=0.290 Sum_probs=174.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeC--------C-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-
Q psy14406 1 EIGECFDSLSENEECRVIILSAA--------G-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL- 70 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~--------G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 70 (275)
||.++|++++.|++|++|||+|. | ++||+|+||+++.....+. ... ........++.++..+
T Consensus 198 eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~l~ 269 (440)
T 2np9_A 198 DMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISL---VDF-----LMRRELGYIHKLVRGVL 269 (440)
T ss_dssp HHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCT---TTT-----HHHHHHTHHHHHHHCEE
T ss_pred HHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhccCcch---hhh-----hhHHHHHHHHHHHHHHH
Confidence 47889999999999999999994 7 8999999999875421100 000 0001112233444444
Q ss_pred -----------hcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHH
Q psy14406 71 -----------ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEI 139 (275)
Q Consensus 71 -----------~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l 139 (275)
..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++| +++|++++|. .++++|
T Consensus 270 ~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~lGl~P~~g-~~~L~rlvG~-~~A~el 347 (440)
T 2np9_A 270 TNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAA-NLRLGRFAGP-RVSRQV 347 (440)
T ss_dssp CCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTCCCCTTH-HHHHHHHHHH-HHHHHH
T ss_pred hhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhccCcCcchH-HHHHHHHhhH-HHHHHH
Confidence 479999999999999999999999999999999999999999999999887 5899999995 999999
Q ss_pred HhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHH---HHHHHHHHHhhccc
Q psy14406 140 AFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVE---EGLNQVDKESKNGC 216 (275)
Q Consensus 140 ~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~---~~l~~~~~~~~~~~ 216 (275)
++||++|+|+||+++||||+|||+ +++.+++.+++++++ +.+++.+|+.++.... +++ +.+..+...+...+
T Consensus 348 lLtG~~i~A~EA~~~GLV~~Vvp~-~eL~~~a~~~A~~la---~~Av~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~ 422 (440)
T 2np9_A 348 ILEGRRIWAKEPEARLLVDEVVEP-DELDAAIERSLTRLD---GDAVLANRRMLNLADE-SPDGFRAYMAEFALMQALRL 422 (440)
T ss_dssp HHHCCCEETTSGGGGGTCSEEECH-HHHHHHHHHHHHTTC---SHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCHHHHHHCCCCcEecCh-HHHHHHHHHHHHHhC---HHHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999997 889999999988874 4789999999998765 554 33444444555567
Q ss_pred CCchHHhcccccccccc
Q psy14406 217 DRRNCNKGVSPERMSHD 233 (275)
Q Consensus 217 ~~~~~~e~~~~~~~~~~ 233 (275)
.++|++|++.+|..+|+
T Consensus 423 ~s~D~~Egv~AFleKR~ 439 (440)
T 2np9_A 423 YGHDVIDKVGRFGGRPP 439 (440)
T ss_dssp TCHHHHHHHHTCC----
T ss_pred cCHHHHHHHHHHHhCCC
Confidence 89999999999998874
|
| >1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-40 Score=323.06 Aligned_cols=220 Identities=22% Similarity=0.280 Sum_probs=189.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCC-CcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGK-IFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~-~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|+++++|||+| |+ +||+|+||+++...... +. .....+...++.++.+|.++||||||
T Consensus 39 ~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~l~~~~kPvIA 108 (715)
T 1wdk_A 39 ELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKL-----PD----AELIAGNLEANKIFSDFEDLNVPTVA 108 (715)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTS-----CH----HHHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccC-----CH----HHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 4788999999999999999999 86 99999999988542110 00 01123344567888999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|. .++++|++||++++|+||+++||||+
T Consensus 109 av~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~-~~A~~l~ltG~~~~a~eA~~~GLv~~ 187 (715)
T 1wdk_A 109 AINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGV-DNAVEWIASGKENRAEDALKVSAVDA 187 (715)
T ss_dssp EECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHTTSSSE
T ss_pred EECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHCCCceE
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcC--C----------HH---------HH------------------HHHHHHHHhhhcCC
Q psy14406 160 LYDDKESLLAGAIELGELIASK--S----------PV---------AV------------------QGTKKTLVFSRDHA 200 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~--~----------~~---------a~------------------~~~K~~l~~~~~~~ 200 (275)
++++ +++.+++.+++++++.. | |. ++ ..+|+.++.....+
T Consensus 188 vv~~-~~l~~~a~~~a~~la~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~~~~g~~~A~~~~k~~v~~~~~~~ 266 (715)
T 1wdk_A 188 VVTA-DKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFG 266 (715)
T ss_dssp EECG-GGHHHHHHHHHHHHHTTSSCHHHHHGGGGSCCSCCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred EeCh-HHHHHHHHHHHHHHhhccCCcchhcccccCccccCchhHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhcCC
Confidence 9986 89999999999999876 4 32 23 35667788888889
Q ss_pred HHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 201 VEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 201 ~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
+++.++.+...+...+.+++.++++.+|..+|
T Consensus 267 ~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr 298 (715)
T 1wdk_A 267 RDKALEVEAAGFAKLAKTSASNCLIGLFLNDQ 298 (715)
T ss_dssp HHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHhhh
Confidence 99999999888888889999999998877654
|
| >2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=324.85 Aligned_cols=220 Identities=20% Similarity=0.312 Sum_probs=184.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCC-CcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGK-IFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~-~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++|++++.|++|++|||+| |+ +||+|+||+++..... . .......+...++.++.++.++||||||
T Consensus 38 ~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~------~---~~~~~~~~~~~~~~~~~~l~~~~kPvIA 107 (725)
T 2wtb_A 38 NLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQK------G---NVKEPKAGYISIDIITDLLEAARKPSVA 107 (725)
T ss_dssp HHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC---------------------CCSSSHHHHHCCCCCCCTSSSCEEE
T ss_pred HHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccc------h---hhhhHHHHHHHHHHHHHHHHhCcCcEEE
Confidence 4788999999999999999999 85 9999999998743110 0 0000011123456667789999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. .++++|++||++++|+||+++||||+
T Consensus 108 av~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~-~~A~~l~ltG~~~~a~eA~~~GLv~~ 186 (725)
T 2wtb_A 108 AIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGL-TKALEMILTSKPVKAEEGHSLGLIDA 186 (725)
T ss_dssp EECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSE
T ss_pred EECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCH-HHHHHHHHcCCCCCHHHHHHCCccce
Confidence 99999999999999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcC--CHH-HH---------------------------------HHHHHHHHhhhcCCHHH
Q psy14406 160 LYDDKESLLAGAIELGELIASK--SPV-AV---------------------------------QGTKKTLVFSRDHAVEE 203 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~--~~~-a~---------------------------------~~~K~~l~~~~~~~~~~ 203 (275)
+||+ +++.+++.+++++++.. |+. ++ ..+|+.++.....++++
T Consensus 187 vv~~-~~l~~~a~~~a~~la~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~g~pA~~~~k~~~~~~~~~~~~~ 265 (725)
T 2wtb_A 187 VVPP-AELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRA 265 (725)
T ss_dssp ECCT-TTHHHHHHHHHHHHHTTSSCCCCGGGCCTTSCCHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHSCHHH
T ss_pred EcCh-hHHHHHHHHHHHHHHhcCCChhhhhhhccccCccchHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHhccCCHHH
Confidence 9997 88999999999999876 332 22 47899999888889999
Q ss_pred HHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 204 GLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 204 ~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
.++.+...+...+.++++++++.++..+|
T Consensus 266 ~l~~E~~~~~~l~~s~~~~~~~~aF~~kr 294 (725)
T 2wtb_A 266 GLEKEAEVASQVVKLDTTKGLIHVFFSQR 294 (725)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHhhhhh
Confidence 99999888888889999999987776543
|
| >2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=296.23 Aligned_cols=181 Identities=18% Similarity=0.289 Sum_probs=159.5
Q ss_pred CHHHHHHHhhhC-CCceEEEEee-CCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh----hcCC
Q psy14406 1 EIGECFDSLSEN-EECRVIILSA-AGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL----ERCP 74 (275)
Q Consensus 1 el~~~l~~~~~d-~~v~~vVl~g-~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~ 74 (275)
+|.++|++++.| ++||+|||+| .|++||+|+||+++..... . ....+.+.++.++.+| .++|
T Consensus 62 eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el~~~~~------~------~~~~~~~~~~~l~~~L~~a~~~~p 129 (556)
T 2w3p_A 62 ELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTH------A------WKVNFCKFTNETRNGLEDSSRHSG 129 (556)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSCH------H------HHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHHhhccc------H------HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 478899999999 9999999999 8899999999998754221 0 0122334456677788 9999
Q ss_pred CcEEEEECchhchHHHHHHHHCCEEEEeCC--ceEeccccc-cCcccCchhhhhhh--HHhCcHHHHHHHHhcCCCCCHH
Q psy14406 75 KPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVD-IGLTADVGALQRLP--RIIGNQSLVNEIAFTARKIEAA 149 (275)
Q Consensus 75 kP~Ia~v~G~a~GgG~~lal~~D~rva~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r~~G~~~~a~~l~ltG~~~~a~ 149 (275)
|||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|++|++++|+ +++|. .++++|++||++++|+
T Consensus 130 KPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rLp~~RlVG~-~rA~eLlLTGr~isA~ 208 (556)
T 2w3p_A 130 LKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRH-DRADIFCTVVEGVRGE 208 (556)
T ss_dssp CEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHHHHTSCCCH-HHHHHHTTCSSCEEHH
T ss_pred CCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCCCccHHHHHHhhccCCH-HHHHHHHHcCCCCCHH
Confidence 999999999999999999999999999999 999999999 99999999999999 99995 8999999999999999
Q ss_pred HHHHcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy14406 150 EARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFS 196 (275)
Q Consensus 150 eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~ 196 (275)
||+++||||++||+ +++.+++.+++++|+..+|.+++. |..++..
T Consensus 209 EAl~lGLVdeVVp~-~eL~~~A~~lA~~LA~~~p~Av~~-K~l~~~~ 253 (556)
T 2w3p_A 209 RAKAWRLVDEVVKP-NQFDQAIQARALELAAQSDRPAHA-QGVPLTR 253 (556)
T ss_dssp HHHHTTSCSEEECH-HHHHHHHHHHHHHHHTTCCCCTTC-CCCCCCC
T ss_pred HHHHCCCceEEeCh-hHHHHHHHHHHHHHHcCChHHHhh-hhhhcch
Confidence 99999999999996 899999999999999999998874 6654443
|
| >3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-20 Score=161.50 Aligned_cols=144 Identities=16% Similarity=0.191 Sum_probs=111.5
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLER-CPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~kP~Ia 79 (275)
+|.++|+++.+|++||+|||++. |.|+|+.... .+++.+..+.. ++|||||
T Consensus 33 ~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------------------~i~~~l~~~~~~~~kPVia 84 (240)
T 3rst_A 33 TFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------------------EIHKKLEEIKKETKKPIYV 84 (240)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------------------HHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------------------HHHHHHHHHHHhCCCeEEE
Confidence 36788999999999999999997 6788885431 12334555665 7999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEecc---------------------ccccCcccCchhhh--------------
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLK---------------------EVDIGLTADVGALQ-------------- 124 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~p---------------------e~~~G~~p~~g~~~-------------- 124 (275)
+|+|.|.|||+.|+++||+||+++++.|+.+ +++.|.+++.+..+
T Consensus 85 ~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~ 164 (240)
T 3rst_A 85 SMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSM 164 (240)
T ss_dssp EEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHH
T ss_pred EECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999 66777777665321
Q ss_pred ------------hhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHH
Q psy14406 125 ------------RLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELG 175 (275)
Q Consensus 125 ------------~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a 175 (275)
.-.|.+.. .. .+.+++|+.+++++|++.||||++.+. +++.+.+.+++
T Consensus 165 l~~~~~~f~~~Va~~R~l~~-~~-~~~~~~g~~~~a~~A~~~GLVD~i~~~-~~~~~~~~~~~ 224 (240)
T 3rst_A 165 VDNSYEGFVDVISKGRGMPK-AE-VKKIADGRVYDGRQAKKLNLVDELGFY-DDTITAMKKDH 224 (240)
T ss_dssp HHHHHHHHHHHHHHHHTCCH-HH-HHHHCSSCEEEHHHHHHTTSSSEECCH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCCCH-HH-HHHHhcCCcccHHHHHHcCCCcccCCH-HHHHHHHHHHh
Confidence 12233442 32 334789999999999999999999985 66666655544
|
| >3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-20 Score=181.15 Aligned_cols=145 Identities=18% Similarity=0.230 Sum_probs=118.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+|.++|+++..|+++++|||++.+ .|+|+.... .+++.+.++..++|||||+
T Consensus 326 ~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~------------------------~i~~~i~~l~~~~kPVia~ 377 (593)
T 3bf0_A 326 TTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASE------------------------VIRAELAAARAAGKPVVVS 377 (593)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHH------------------------HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHH------------------------HHHHHHHHHHhCCCCEEEE
Confidence 367899999999999999999974 577775321 1234466777889999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEecccc------------ccCcccCch-------------hh------------
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEV------------DIGLTADVG-------------AL------------ 123 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~------------~~G~~p~~g-------------~~------------ 123 (275)
|+|.|.|||+.|+++||+|||++++.|+.+++ ++|+.|+.+ .+
T Consensus 378 v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~~~l~~~l~ 457 (593)
T 3bf0_A 378 MGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIE 457 (593)
T ss_dssp EEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHHHHHH
T ss_pred ECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999875 588876531 22
Q ss_pred ---hhhhHHhCcHHH-----HHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHH
Q psy14406 124 ---QRLPRIIGNQSL-----VNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELG 175 (275)
Q Consensus 124 ---~~l~r~~G~~~~-----a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a 175 (275)
..+.+.++. .+ +.+++++|+.++|+||+++||||++++. +++.+.+.+++
T Consensus 458 ~~~~~f~~~V~~-~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~-~~~~~~a~~~a 515 (593)
T 3bf0_A 458 NGYKRFITLVAD-ARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDF-DDAVAKAAELA 515 (593)
T ss_dssp HHHHHHHHHHHH-HTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCH-HHHHHHHHHHS
T ss_pred HHHHHHHHHHHH-HcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCH-HHHHHHHHHHc
Confidence 567778884 66 8899999999999999999999999975 77776666644
|
| >3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=148.98 Aligned_cols=135 Identities=16% Similarity=0.243 Sum_probs=108.3
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
|.+.|+.+++ +++++|||+.. |.|+|+... ..++..|..+|||||+.|
T Consensus 27 l~~~l~~a~~-~~~~~Ivl~in----spGG~v~~~---------------------------~~i~~~i~~~~~PVia~v 74 (230)
T 3viv_A 27 FDRYITIAEQ-DNAEAIIIELD----TPGGRADAM---------------------------MNIVQRIQQSKIPVIIYV 74 (230)
T ss_dssp HHHHHHHHHH-TTCSEEEEEEE----BSCEEHHHH---------------------------HHHHHHHHTCSSCEEEEE
T ss_pred HHHHHHHHhc-CCCCEEEEEEe----CCCcCHHHH---------------------------HHHHHHHHhCCCCEEEEE
Confidence 5677888876 46999999986 888877443 234556778899999999
Q ss_pred ---CchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhh---------------hhhhHHhCc-HHHHHHHHhc
Q psy14406 82 ---HGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGAL---------------QRLPRIIGN-QSLVNEIAFT 142 (275)
Q Consensus 82 ---~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r~~G~-~~~a~~l~lt 142 (275)
+|.|.|+|+.|+++||+|+++++++|+.+++..+. |..|.+ ..+++..|. ...+.+++.+
T Consensus 75 ~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~~Gr~~~~a~~~~~~ 153 (230)
T 3viv_A 75 YPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITK 153 (230)
T ss_dssp CSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred ecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhc
Confidence 99999999999999999999999999999987532 444432 247777883 2578999999
Q ss_pred CCCCCHHHHHHcCCcccccCChhHHHH
Q psy14406 143 ARKIEAAEARECGLVSKLYDDKESLLA 169 (275)
Q Consensus 143 G~~~~a~eA~~~GLv~~vv~~~~~l~~ 169 (275)
+..++|+||+++||||+++++.+++.+
T Consensus 154 ~~~ltA~EAle~GliD~V~~~~~~ll~ 180 (230)
T 3viv_A 154 DLSLTPEEALKYGVIEVVARDINELLK 180 (230)
T ss_dssp CCEECHHHHHHTTSCSEECSSHHHHHH
T ss_pred CCeecHHHHHHcCCceEecCCHHHHHH
Confidence 999999999999999999986444433
|
| >1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.9e-15 Score=127.63 Aligned_cols=130 Identities=17% Similarity=0.155 Sum_probs=98.7
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.+.|..++.|++++.|+|.- .|.|+++..- ..++..|..+++||++.+
T Consensus 62 i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~ag---------------------------~~I~~~i~~~~~pV~t~v 110 (218)
T 1y7o_A 62 VIAQLLFLDAQDSTKDIYLYV----NTPGGSVSAG---------------------------LAIVDTMNFIKADVQTIV 110 (218)
T ss_dssp HHHHHHHHHHHCTTSCEEEEE----EECCBCHHHH---------------------------HHHHHHHHHSSSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEE----ECcCCCHHHH---------------------------HHHHHHHHhcCCCEEEEE
Confidence 567788888888888888873 3556555321 123445666799999999
Q ss_pred CchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchh------------------hhhhhHHhCcH-HHHHHHH
Q psy14406 82 HGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGA------------------LQRLPRIIGNQ-SLVNEIA 140 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~------------------~~~l~r~~G~~-~~a~~l~ 140 (275)
+|.|.++|+.|+++||. |++.++++|++++.. |..|..|. ...+++..|.. ..+.+++
T Consensus 111 ~G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~ 189 (218)
T 1y7o_A 111 MGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADA 189 (218)
T ss_dssp EEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred ccEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 99999999999999999 999999999999987 43332332 24577777751 3677888
Q ss_pred hcCCCCCHHHHHHcCCcccccCC
Q psy14406 141 FTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 141 ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.+|+.++|+||+++||||+++++
T Consensus 190 ~~~~~~ta~EA~e~GLVD~v~~~ 212 (218)
T 1y7o_A 190 ERDNWMSAQETLEYGFIDEIMAN 212 (218)
T ss_dssp HSCCCBCHHHHHHHTSCSEECCC
T ss_pred hCCCEEcHHHHHHCCCCcEEcCc
Confidence 99999999999999999999986
|
| >2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.2e-14 Score=127.77 Aligned_cols=135 Identities=16% Similarity=0.224 Sum_probs=107.2
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh---hcCCCcEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL---ERCPKPVI 78 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~kP~I 78 (275)
+.++++.+.++ .+.+|+|+++| |+|+.+... . + ..+.+++..+ ...++|+|
T Consensus 142 i~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~---------~-------l----~~~~~i~~al~~~~~~~vP~I 195 (304)
T 2f9y_B 142 FVRAVEQALED-NCPLICFSASG-----GARMQEALM---------S-------L----MQMAKTSAALAKMQERGLPYI 195 (304)
T ss_dssp HHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHH---------H-------H----HHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHH---------H-------H----HHHHHHHHHHHHHhcCCCCEE
Confidence 45677888777 89999999966 888855320 0 1 1223334444 45599999
Q ss_pred EEECchhchHH-HHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 79 SAVHGACIGGG-MSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 79 a~v~G~a~GgG-~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
++|+|.|.||| +.++++||++|+.++|+|++. +...+++.+|. . ++++..+++++.++|+|
T Consensus 196 avV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~-~------l~~~~~~Ae~~~~~Glv 257 (304)
T 2f9y_B 196 SVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVRE-K------LPPGFQRSEFLIEKGAI 257 (304)
T ss_dssp EEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTS-C------CCTTTTBHHHHGGGTCC
T ss_pred EEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCc-c------CCcccCCHHHHHhcCCc
Confidence 99999999999 677999999999999999986 34667888884 2 57899999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcC
Q psy14406 158 SKLYDDKESLLAGAIELGELIASK 181 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~ 181 (275)
|.|+++ +++.+.+.+++..++..
T Consensus 258 d~Vv~~-~el~~~l~~ll~~l~~~ 280 (304)
T 2f9y_B 258 DMIVRR-PEMRLKLASILAKLMNL 280 (304)
T ss_dssp SEECCH-HHHHHHHHHHHHHHTTC
T ss_pred cEEeCc-HHHHHHHHHHHHHhhcC
Confidence 999997 88999999999998764
|
| >2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-13 Score=122.79 Aligned_cols=116 Identities=17% Similarity=0.150 Sum_probs=89.9
Q ss_pred HHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHh
Q psy14406 62 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAF 141 (275)
Q Consensus 62 ~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~l 141 (275)
.+..++..+..+++|+|++|+|.|.|||+.++++||++|+.++++|++ +.|.++++.++.+..+. ..+.++
T Consensus 200 ~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~-~~Aae~-- 270 (339)
T 2f9y_A 200 AIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKA-PLAAEA-- 270 (339)
T ss_dssp HHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTH-HHHHHH--
T ss_pred HHHHHHHHHHhCCCCEEEEEeCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccH-HHHHHH--
Confidence 445667788999999999999999999999999999999999999996 46777777766666663 666666
Q ss_pred cCCCCCHHHHHHcCCcccccCCh--------h----HHHHHHHHHHHHHhcCCHHHHHH
Q psy14406 142 TARKIEAAEARECGLVSKLYDDK--------E----SLLAGAIELGELIASKSPVAVQG 188 (275)
Q Consensus 142 tG~~~~a~eA~~~GLv~~vv~~~--------~----~l~~~a~~~a~~la~~~~~a~~~ 188 (275)
..+++++|+++|+||+|++.. + ++.+...+..+.+...++..+..
T Consensus 271 --~~itA~~a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~~ 327 (339)
T 2f9y_A 271 --MGIIRPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKN 327 (339)
T ss_dssp --HTCSHHHHHTTTSCSCCCCCSTTCGGGCHHHHHHHHHHHHHHHTTTTTTSCHHHHHH
T ss_pred --cCCCHHHHHHcCCeeEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 679999999999999999842 1 44444444555555566554433
|
| >2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-13 Score=121.43 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=86.5
Q ss_pred HHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHh
Q psy14406 62 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAF 141 (275)
Q Consensus 62 ~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~l 141 (275)
.+..++..+..+++|+|++|+|.|.|||+.++++||++||+++++|++ +.|.++++. +.+..+....+.++
T Consensus 186 ~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~i-l~~~~~~a~~A~e~-- 256 (327)
T 2f9i_A 186 SIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAAL-LWKDSNLAKIAAET-- 256 (327)
T ss_dssp HHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHH-HSSCGGGHHHHHHH--
T ss_pred HHHHHHHHHHhCCCCEEEEEECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHH-HHHHhcchHHHHHH--
Confidence 445567788999999999999999999999999999999999999885 345555544 44444323556665
Q ss_pred cCCCCCHHHHHHcCCcccccCCh--------h----HHHHHHHHHHHHHhcCCHHHHHH
Q psy14406 142 TARKIEAAEARECGLVSKLYDDK--------E----SLLAGAIELGELIASKSPVAVQG 188 (275)
Q Consensus 142 tG~~~~a~eA~~~GLv~~vv~~~--------~----~l~~~a~~~a~~la~~~~~a~~~ 188 (275)
..++|.+|+++|+||+|++.. + ++.+...+..+.+...++..+..
T Consensus 257 --~~itA~~a~~~GlVd~VV~ep~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~~ 313 (327)
T 2f9i_A 257 --MKITAHDIKQLGIIDDVISEPLGGAHKDIEQQALAIKSAFVAQLDSLESLSRDEIAN 313 (327)
T ss_dssp --HTCBHHHHHHTTSSSEEECCCTTCGGGCHHHHHHHHHHHHHHHHHTTTTCCHHHHHH
T ss_pred --cCCCHHHHHHcCCceEEecCCCCCCccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 789999999999999999842 2 45555555555565666654443
|
| >2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-10 Score=96.62 Aligned_cols=139 Identities=19% Similarity=0.178 Sum_probs=89.6
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.+.|..++.+++++.|+|.=. |.|+++..- ..++..|..+++||++.+
T Consensus 44 i~~~L~~~~~~~~~k~I~l~In----SPGG~v~a~---------------------------~~I~~~i~~~~~pV~~~v 92 (208)
T 2cby_A 44 LCAQILLLAAEDASKDISLYIN----SPGGSISAG---------------------------MAIYDTMVLAPCDIATYA 92 (208)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEE----ECCBCHHHH---------------------------HHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHhCCCCCCEEEEEE----CCCCCHHHH---------------------------HHHHHHHHhcCCCEEEEE
Confidence 4567777887777777776532 344443211 223455666789999999
Q ss_pred CchhchHHHHHHHHCCE--EEEeCCceEeccccccCccc---Cchh------------hhhhhHHhCc-HHHHHHHHhcC
Q psy14406 82 HGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTA---DVGA------------LQRLPRIIGN-QSLVNEIAFTA 143 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p---~~g~------------~~~l~r~~G~-~~~a~~l~ltG 143 (275)
.|.|.++|..++++||. |++.+++.+++....-|... +... ...+.+..|. .....+++..|
T Consensus 93 ~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~ 172 (208)
T 2cby_A 93 MGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRD 172 (208)
T ss_dssp EEEEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTT
T ss_pred CcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCC
Confidence 99999999999999998 99999999988765433210 0000 0113334443 12245577889
Q ss_pred CCCCHHHHHHcCCcccccCChhHHHHHH
Q psy14406 144 RKIEAAEARECGLVSKLYDDKESLLAGA 171 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~vv~~~~~l~~~a 171 (275)
..++++||+++||||++....+++.+..
T Consensus 173 ~~~ta~eA~e~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 173 RWFTAAEALEYGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp CEEEHHHHHHHTSCSEECSCC-------
T ss_pred cEEcHHHHHHcCCCcEecCchHHHHHHH
Confidence 9999999999999999997756555543
|
| >2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.7e-08 Score=91.24 Aligned_cols=199 Identities=21% Similarity=0.255 Sum_probs=150.9
Q ss_pred hhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE-CchhchH
Q psy14406 10 SENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV-HGACIGG 88 (275)
Q Consensus 10 ~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v-~G~a~Gg 88 (275)
-++++|...+++..|.. ..+..... .-...++.+..++.+..+.+++.++.-.+.-++|.| .|.|+.|
T Consensus 322 ~ne~~~~~~~~~t~g~~-------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~g 390 (556)
T 2w3p_A 322 TNELAVGTWVFRTEGDA-------RHLLAADA----SLMQHKDHWFVRETIGLLRRTLARIDVSSRSLFALIEPGSCFAG 390 (556)
T ss_dssp HHCSSCCEEEEEEESCH-------HHHHHHHH----HHHHTTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEECTTCCEEG
T ss_pred hccHHHhHhhhhccCCH-------HHHhhhHH----HHHhccchHHHHHHHHHHHHHHHHhcccchhheeeecCCcchHH
Confidence 46689999998887643 33332110 001123445678888889999999999999999999 7999877
Q ss_pred HH-HHHHHCCEEEEeC-------CceEeccccccCcccCchhhhhhhHHhCcHHHHHH--HHhcCCCCCHHHHHHcCCcc
Q psy14406 89 GM-SLITAADIRYATK-------DAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNE--IAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 89 G~-~lal~~D~rva~~-------~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~--l~ltG~~~~a~eA~~~GLv~ 158 (275)
-+ +|+++||..++-+ .+.+.+.+.++|.+|-+-+..+|.+++-...-... -...|+++++++|.++|||+
T Consensus 391 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (556)
T 2w3p_A 391 TFAELAFAADRTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVT 470 (556)
T ss_dssp GGHHHHHTSSEEEECCCTTCTTTSCCEECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSS
T ss_pred HHHHHHHHhhhhhhhcCCCCCCCCceeEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCee
Confidence 55 9999999999853 37899999999999999888888877532122221 23469999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHH-HHHHHHHHhhcccCCch
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEE-GLNQVDKESKNGCDRRN 220 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~-~l~~~~~~~~~~~~~~~ 220 (275)
...++ -+++++..-..++-++.+|.++..+...+++...++++. +......|+.=-++.++
T Consensus 471 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (556)
T 2w3p_A 471 ASPDD-IDWADEIRIALEERAAMSPDALTGLEANLRFNGPETMETRIFGRLTAWQNWIFNRPN 532 (556)
T ss_dssp BCCCT-TTHHHHHHHHHHHHHHSCHHHHHHHHHHHSSCSCCCHHHHHHTHHHHHHHHHHTSHH
T ss_pred cCccc-CChHHHHHHHHHHHhccCcchhccchhhcccCCchhhhhHHHHHhHHHHHHhhcCCC
Confidence 99887 789999999999999999999999999999998888765 33444444322334433
|
| >1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A | Back alignment and structure |
|---|
Probab=98.66 E-value=4.9e-08 Score=81.24 Aligned_cols=131 Identities=18% Similarity=0.158 Sum_probs=84.3
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+.+.|..++.+++++.|+|.=. |.|+++..- ..++..|..+++|+++.+
T Consensus 43 i~~~L~~l~~~~~~~~I~l~In----SPGG~v~a~---------------------------~~I~~~i~~~~~pV~~~v 91 (193)
T 1yg6_A 43 IVAQMLFLEAENPEKDIYLYIN----SPGGVITAG---------------------------MSIYDTMQFIKPDVSTIC 91 (193)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEE----ECCBCHHHH---------------------------HHHHHHHHHSSSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEEE----CcCCCHHHH---------------------------HHHHHHHHhcCCCEEEEE
Confidence 4567777777776777777632 444444221 123445666789999999
Q ss_pred CchhchHHHHHHHHCCE--EEEeCCceEeccccccCccc---Cchh------------hhhhhHHhCc-HHHHHHHHhcC
Q psy14406 82 HGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTA---DVGA------------LQRLPRIIGN-QSLVNEIAFTA 143 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p---~~g~------------~~~l~r~~G~-~~~a~~l~ltG 143 (275)
.|.|..+|.-++++||. |++.+++.+++-....|... +... ...+.+..|. ......++-.+
T Consensus 92 ~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~ 171 (193)
T 1yg6_A 92 MGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERD 171 (193)
T ss_dssp EEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSC
T ss_pred eeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Confidence 99999999999999999 99999999877654433210 1000 0012222332 11222333234
Q ss_pred CCCCHHHHHHcCCcccccCC
Q psy14406 144 RKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~vv~~ 163 (275)
..++++||+++||||++..+
T Consensus 172 ~~~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 172 RFLSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp EEEEHHHHHHHTSSSEECCC
T ss_pred eEEcHHHHHHcCCCCEecCC
Confidence 45799999999999999865
|
| >3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A | Back alignment and structure |
|---|
Probab=98.61 E-value=2.8e-07 Score=77.21 Aligned_cols=131 Identities=17% Similarity=0.153 Sum_probs=84.4
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+...|..++.++..+.|+|.=. |.|+++..- ..++..|..+++||++.+
T Consensus 44 i~~~L~~l~~~~~~~~I~l~In----SPGG~v~~~---------------------------~~I~~~i~~~~~~V~t~~ 92 (203)
T 3qwd_A 44 IVSQLLFLQAQDSEKDIYLYIN----SPGGSVTAG---------------------------FAIYDTIQHIKPDVQTIC 92 (203)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEE----ECCBCHHHH---------------------------HHHHHHHHHSSSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEEe----CCCCCHHHH---------------------------HHHHHHHHHhcCCcEEEE
Confidence 4566777777766676666522 344444221 123445566689999999
Q ss_pred CchhchHHHHHHHHCC--EEEEeCCceEeccccccCcc---cCchh------------hhhhhHHhCc-HHHHHHHHhcC
Q psy14406 82 HGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLT---ADVGA------------LQRLPRIIGN-QSLVNEIAFTA 143 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~---p~~g~------------~~~l~r~~G~-~~~a~~l~ltG 143 (275)
.|.|.++|..|+++|| .|++.+++.|.+-...-|.. .+.-- ...+.+..|. ......++-..
T Consensus 93 ~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d 172 (203)
T 3qwd_A 93 IGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRD 172 (203)
T ss_dssp EEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSC
T ss_pred eeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcC
Confidence 9999999999999999 69999999988765432211 11000 0012222332 12233444445
Q ss_pred CCCCHHHHHHcCCcccccCC
Q psy14406 144 RKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~vv~~ 163 (275)
.-++|+||++.||||+|+.+
T Consensus 173 ~~lta~EA~e~GliD~I~~~ 192 (203)
T 3qwd_A 173 NFLTAEEAKEYGLIDEVMVP 192 (203)
T ss_dssp CCEEHHHHHHHTSCSEECCC
T ss_pred ceecHHHHHHcCCcCEecCC
Confidence 66899999999999999976
|
| >2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=98.59 E-value=2.3e-07 Score=78.41 Aligned_cols=97 Identities=8% Similarity=0.128 Sum_probs=64.8
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcc---cCchh----hh--------hhhHH
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLT---ADVGA----LQ--------RLPRI 129 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~---p~~g~----~~--------~l~r~ 129 (275)
+..|..+++|+++.+.|.|..+|.-++++||. |++.+++.+.+.....|.. .+... .. .+.+.
T Consensus 89 ~~~i~~~~~pV~t~v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~ 168 (215)
T 2f6i_A 89 LDIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSF 168 (215)
T ss_dssp HHHHHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566678999999999999999999999999 9999999988765543321 11110 00 01111
Q ss_pred hCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 130 IGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 130 ~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.|. ......++-.+..++++||+++||||++..+
T Consensus 169 ~g~~~e~i~~~~~~~~~lta~eA~e~GLiD~I~~~ 203 (215)
T 2f6i_A 169 TNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIET 203 (215)
T ss_dssp HCCCHHHHHHHHHTTCEECHHHHHHHTSCSEECCC
T ss_pred hCcCHHHHHHHHhCCeecCHHHHHHCCCCCEecCC
Confidence 221 1222333333345699999999999999875
|
| >3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=98.52 E-value=1.7e-07 Score=78.42 Aligned_cols=135 Identities=13% Similarity=0.138 Sum_probs=83.6
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV 81 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v 81 (275)
+...|..++.++..+.|+|.=. |.|+++..- ..++..|..+++|+++.+
T Consensus 47 i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~~---------------------------~~I~~~i~~~~~~v~t~~ 95 (201)
T 3p2l_A 47 VIAQLLFLESEDPDKDIYFYIN----SPGGMVTAG---------------------------MGVYDTMQFIKPDVSTIC 95 (201)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEE----ECCBCHHHH---------------------------HHHHHHHHHSSSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEEE----CCCCCHHHH---------------------------HHHHHHHHHhCCCeEEEE
Confidence 4556777776666676666532 444444221 123445566789999999
Q ss_pred CchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCc---hh------------hhhhhHHhCc-HHHHHHHHhcC
Q psy14406 82 HGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADV---GA------------LQRLPRIIGN-QSLVNEIAFTA 143 (275)
Q Consensus 82 ~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~---g~------------~~~l~r~~G~-~~~a~~l~ltG 143 (275)
.|.|.++|.-+++++|. |++.+++.+.+....-|..-.. .- ...+.+..|. ......++-..
T Consensus 96 ~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~ 175 (201)
T 3p2l_A 96 IGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRD 175 (201)
T ss_dssp EEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSC
T ss_pred cCEehhHHHHHHHcCccCCEEEcCCCeEEEeccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcC
Confidence 99999999999999998 9999999987665542211000 00 0001222232 11222233223
Q ss_pred CCCCHHHHHHcCCcccccCChhHH
Q psy14406 144 RKIEAAEARECGLVSKLYDDKESL 167 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~vv~~~~~l 167 (275)
.-++|+||+++||||+|+++.++|
T Consensus 176 ~~lta~EA~e~GliD~I~~~~~~l 199 (201)
T 3p2l_A 176 NFMMADEAKAYGLIDHVIESREAI 199 (201)
T ss_dssp EEEEHHHHHHHTSCSEECCCSCC-
T ss_pred eeecHHHHHHcCCccEecCCHHHh
Confidence 347999999999999999875444
|
| >1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=3.3e-07 Score=80.07 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=66.6
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCE--EEEeCCceEeccccccCcccCchhhh---------------hhhHH
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADI--RYATKDAWFTLKEVDIGLTADVGALQ---------------RLPRI 129 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~--rva~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~ 129 (275)
+..|...++||++.+.|.|..+|.-|+++||. |++.+++.++.-....|......-.. .+.+.
T Consensus 133 yd~I~~~k~pV~t~v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~ 212 (277)
T 1tg6_A 133 YDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKH 212 (277)
T ss_dssp HHHHHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456668999999999999999999999999 99999999887655433211100000 11122
Q ss_pred hCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHH
Q psy14406 130 IGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDDKESL 167 (275)
Q Consensus 130 ~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l 167 (275)
.|. ......++-.+..++++||+++||||++....+++
T Consensus 213 tG~~~e~i~~~~drd~~lta~EAle~GLID~I~~~~~~~ 251 (277)
T 1tg6_A 213 TKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQD 251 (277)
T ss_dssp HCCCHHHHHHHHSSCEEECHHHHHHHTSCSEECSSCC--
T ss_pred hCCCHHHHHHHHhcCcccCHHHHHHCCCCCEecCcchhh
Confidence 221 11223334334567999999999999999764433
|
| >3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A | Back alignment and structure |
|---|
Probab=98.24 E-value=5.3e-06 Score=80.22 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=62.8
Q ss_pred HHHHHHHhhhCCCceEEEEeeCCCCcccC-CCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 2 IGECFDSLSENEECRVIILSAAGKIFTAG-LDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 2 l~~~l~~~~~d~~v~~vVl~g~G~~FcaG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
+.+.|+.+.+|+.++.|+|.-. |.| +++.... .+++.+..+....|||||.
T Consensus 75 i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~------------------------~I~~~i~~~k~~gkpvva~ 126 (593)
T 3bf0_A 75 IVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQ------------------------YIGKALKEFRDSGKPVYAV 126 (593)
T ss_dssp HHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHH------------------------HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHH------------------------HHHHHHHHHHhcCCeEEEE
Confidence 4678888999999999999865 444 5654321 2344455555557999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVD 113 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~ 113 (275)
+++ +..+|+.|+++||.+++.+.+.++...+.
T Consensus 127 ~~~-aas~~y~lAsaad~i~~~P~~~vg~~g~~ 158 (593)
T 3bf0_A 127 GEN-YSQGQYYLASFANKIWLSPQGVVDLHGFA 158 (593)
T ss_dssp ESC-EEHHHHHHHTTSSEEEECTTCCEECCCCB
T ss_pred Ecc-chhHHHHHHHhCCEEEECCCceEEEeccc
Confidence 886 56788999999999999999988776654
|
| >1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.1e-05 Score=77.51 Aligned_cols=102 Identities=19% Similarity=0.229 Sum_probs=69.7
Q ss_pred HHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHH-hcCC
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIA-FTAR 144 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~-ltG~ 144 (275)
+..+.....|+|++|.|.|.|||... ..||++|++++ +++++.... +--...-.-.++ ..++.+++ .||+
T Consensus 174 ~~~ls~~giP~Isvv~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~------vi~~~~~~~~~d-~~~A~el~~~tge 245 (587)
T 1pix_A 174 NAELNQLGIPVIVGIYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAG------IMGGMNPKGHVD-LEYANEIADMVDR 245 (587)
T ss_dssp HHHHHHTTCCEEEEECSEEETHHHHH-HHSSSEEEEETTCEEESCCCT------TCCSCCSSSSCC-HHHHHHHHHHHHT
T ss_pred HHHHhCCCCCEEEEEecCCcHHHHHH-HhcCceEEecCCcEEEecCHH------HHhhhccccccc-hhHHHHHHHHhCC
Confidence 45566778999999999999999999 99999988875 887763221 100000011256 37888999 8888
Q ss_pred CCCHHH-----HH--HcCCcccccCChhHHHHHHHHHHH
Q psy14406 145 KIEAAE-----AR--ECGLVSKLYDDKESLLAGAIELGE 176 (275)
Q Consensus 145 ~~~a~e-----A~--~~GLv~~vv~~~~~l~~~a~~~a~ 176 (275)
.+++++ .. +.|++|.++++.++..+.+.++..
T Consensus 246 ~v~~e~lgga~~h~~~~GvvD~vv~~e~~a~~~~r~~ls 284 (587)
T 1pix_A 246 TGKTEPPGAVDIHYTETGFMREVYASEEGVLEGIKKYVG 284 (587)
T ss_dssp TCCCCCSSBHHHHTTTSCCSCEEESSHHHHHHHHHHHHH
T ss_pred ccChhhcccHHHHHhhcCceeEecCCHHHHHHHHHHHHH
Confidence 876554 33 699999999984334444444443
|
| >3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00021 Score=67.70 Aligned_cols=82 Identities=18% Similarity=0.328 Sum_probs=62.4
Q ss_pred CcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHH--
Q psy14406 75 KPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEA-- 151 (275)
Q Consensus 75 kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA-- 151 (275)
.|+|++|.|+|.|||......||++|++++ +.+++. |+ ... + ..+|+.+++++.
T Consensus 170 iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP-~vi-~-~~~ge~v~~e~LGG 226 (530)
T 3iav_A 170 IPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GP-DVI-K-TVTGEDVGFEELGG 226 (530)
T ss_dssp SCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CH-HHH-H-HHHCCCCCHHHHHB
T ss_pred CCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CH-HHH-H-HHhCCcCChhhcch
Confidence 999999999999999999999999999876 877652 32 111 1 146788888765
Q ss_pred -----HHcCCcccccCChhHHHHHHHHHHHHHh
Q psy14406 152 -----RECGLVSKLYDDKESLLAGAIELGELIA 179 (275)
Q Consensus 152 -----~~~GLv~~vv~~~~~l~~~a~~~a~~la 179 (275)
...|++|.++++.++..+.+.++...+.
T Consensus 227 a~~h~~~sGv~d~va~de~~a~~~~r~~ls~lp 259 (530)
T 3iav_A 227 ARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLP 259 (530)
T ss_dssp HHHHHHTSCCCSEEESSHHHHHHHHHHHHHHSC
T ss_pred HHHHHhccCceeEEecChHHHHHHHHHHHHhcc
Confidence 6899999999984456666666666553
|
| >4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00014 Score=60.72 Aligned_cols=98 Identities=12% Similarity=0.240 Sum_probs=65.9
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCc----ccCchh------------hhhhh
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGL----TADVGA------------LQRLP 127 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~----~p~~g~------------~~~l~ 127 (275)
++..|...+.||...+.|.|.+.|.-|++++| .|++.+++++-+-....|. ..+.-- ...+.
T Consensus 88 Iyd~m~~~~~~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya 167 (205)
T 4gm2_A 88 IVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIIS 167 (205)
T ss_dssp HHHHHHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556667899999999999999999999999 5999999998765554333 111110 01122
Q ss_pred HHhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 128 RIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 128 r~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
+..|. .....+++-...-++|+||+++||||+|+..
T Consensus 168 ~~TG~~~e~I~~~m~rd~~msa~EA~eyGlID~V~~~ 204 (205)
T 4gm2_A 168 KNTEKDTNVISNVLERDKYFNADEAVDFKLIDHILEK 204 (205)
T ss_dssp HHHTCCHHHHHHHTTSCEEEEHHHHHHTTSCSEECCC
T ss_pred HHhCCCHHHHHHHhcCCcccCHHHHHHcCCccEeecC
Confidence 22221 1122333334455999999999999999875
|
| >1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0015 Score=61.96 Aligned_cols=84 Identities=15% Similarity=0.252 Sum_probs=60.5
Q ss_pred CCCcEEEEECchhchHHHHHHHHCCEEEEeCC-c-eEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHH-
Q psy14406 73 CPKPVISAVHGACIGGGMSLITAADIRYATKD-A-WFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAA- 149 (275)
Q Consensus 73 ~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a-~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~- 149 (275)
-..|+|+.+.|+|.||+......||++|+.++ + .+++. |+ . ..+ ..+|+.++.+
T Consensus 162 ~~iP~Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a--------------------GP-~-vI~-~~~ge~~~~e~ 218 (522)
T 1x0u_A 162 GVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT--------------------GP-E-ITK-VVLGEEVSFQD 218 (522)
T ss_dssp TTSCEEEEECSEEEGGGGHHHHHSSEEEEECSTTCEEESS--------------------CH-H-HHH-HTTCCCCCHHH
T ss_pred CCCcEEEEEcCCCchHHHHHHhcCCeEEEecCCccEEEec--------------------CH-H-HHH-HHhCCcCChhh
Confidence 35999999999999999999999999999988 7 66541 21 1 101 1356677653
Q ss_pred ----HHH--HcCCcccccCChhHHHHHHHHHHHHHh
Q psy14406 150 ----EAR--ECGLVSKLYDDKESLLAGAIELGELIA 179 (275)
Q Consensus 150 ----eA~--~~GLv~~vv~~~~~l~~~a~~~a~~la 179 (275)
+.+ ..|++|.++++..++.+.+.++..-+.
T Consensus 219 lggae~~~~~~G~~d~vv~~~~~~~~~~~~ll~~lp 254 (522)
T 1x0u_A 219 LGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLP 254 (522)
T ss_dssp HHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSC
T ss_pred cchHHHHhhcCceeEEEeCCHHHHHHHHHHHHHhcc
Confidence 333 699999999974556666666666554
|
| >1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.001 Score=63.12 Aligned_cols=84 Identities=23% Similarity=0.307 Sum_probs=59.9
Q ss_pred CCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHH---
Q psy14406 73 CPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAA--- 149 (275)
Q Consensus 73 ~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~--- 149 (275)
-..|+|+++.|+|.||+......||++|+.+++.+++. |+ ... +- .+|+.++.+
T Consensus 166 ~~iP~Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP-~vI-~~-~~ge~~~~e~lg 222 (523)
T 1on3_A 166 GVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GP-QVI-KS-VTGEDVTADELG 222 (523)
T ss_dssp TTSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CH-HHH-HH-HHCCCCCHHHHH
T ss_pred CCCCEEEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CH-HHH-HH-HhCCcCChHhcc
Confidence 35999999999999999999999999999999876644 21 111 11 256676653
Q ss_pred --HHH--HcCCcccccCChhHHHHHHHHHHHHHh
Q psy14406 150 --EAR--ECGLVSKLYDDKESLLAGAIELGELIA 179 (275)
Q Consensus 150 --eA~--~~GLv~~vv~~~~~l~~~a~~~a~~la 179 (275)
|.+ ..|++|.++++..+..+.+.++...+.
T Consensus 223 gae~h~~~~G~vd~vv~d~~~~~~~~r~lL~~lp 256 (523)
T 1on3_A 223 GAEAHMAISGNIHFVAEDDDAAELIAKKLLSFLP 256 (523)
T ss_dssp SHHHHHHTTCCCSEEESSHHHHHHHHHHHHHTSC
T ss_pred cHHHHhhccCceEEEeCCHHHHHHHHHHHHHhcC
Confidence 333 699999999974456655555555443
|
| >3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00054 Score=64.91 Aligned_cols=80 Identities=24% Similarity=0.424 Sum_probs=59.1
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHH-
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEA- 151 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA- 151 (275)
..|+|++|.|+|.|||......||++|+.++ +.+++ -|+ . ..+ ..+|+.+++++.
T Consensus 177 ~iP~Isvv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~--------------------aGP-~-vI~-~~~ge~v~~E~LG 233 (531)
T 3n6r_B 177 VVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV--------------------TGP-D-VVK-TVTNEQVSAEELG 233 (531)
T ss_dssp TSCEEEEECSCCBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCH-H-HHH-HHHCCCCCHHHHH
T ss_pred CCCEEEEEeCCcchHHHHHhhhCCEEEEecCCceEee--------------------cCH-H-HHH-HHhCCccChhhcc
Confidence 5899999999999999988888999999986 66543 121 1 111 137888999988
Q ss_pred ------HHcCCcccccCChhHHHHHHHHHHH
Q psy14406 152 ------RECGLVSKLYDDKESLLAGAIELGE 176 (275)
Q Consensus 152 ------~~~GLv~~vv~~~~~l~~~a~~~a~ 176 (275)
...|++|.++++.++..+.+.++..
T Consensus 234 Ga~~h~~~sG~~d~v~~~e~~a~~~~r~lls 264 (531)
T 3n6r_B 234 GATTHTRKSSVADAAFENDVEALAEVRRLVD 264 (531)
T ss_dssp BHHHHHHTTSCCSEEESSHHHHHHHHHHHHT
T ss_pred hHHHHhhccCcceEEeCCHHHHHHHHHHHHH
Confidence 8999999999973334444444443
|
| >2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00092 Score=63.69 Aligned_cols=82 Identities=16% Similarity=0.224 Sum_probs=57.7
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHH---
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAA--- 149 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~--- 149 (275)
..|+|+.|.|+|.||+......||++|+.++ +.+++. |+ ... +- .+|+.++.+
T Consensus 180 ~iP~Isvv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP-~vI-~~-~~ge~v~~e~lg 236 (548)
T 2bzr_A 180 VIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GP-DVI-KT-VTGEEVTMEELG 236 (548)
T ss_dssp TSCEEEEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CH-HHH-HH-HHCCCCCHHHHH
T ss_pred CCcEEEEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cH-HHH-HH-HhCCcCChHhcc
Confidence 4999999999999999999899999999987 776643 21 111 11 256677653
Q ss_pred --HHH--HcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 150 --EAR--ECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 150 --eA~--~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
+.+ ..|++|.++++..+..+.+.++...+
T Consensus 237 gae~h~~~sG~~d~vv~d~~~~~~~~r~lls~l 269 (548)
T 2bzr_A 237 GAHTHMAKSGTAHYAASGEQDAFDYVRELLSYL 269 (548)
T ss_dssp BHHHHHHTSSCCSEEESSHHHHHHHHHHHHTTS
T ss_pred cHHHHhhccCceeEEeCCHHHHHHHHHHHHHhc
Confidence 333 69999999997444555555554443
|
| >2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00091 Score=58.61 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=63.6
Q ss_pred HHHHHhhcCCCcEEEEECchhchHHHHH-HHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcC
Q psy14406 65 KSISSLERCPKPVISAVHGACIGGGMSL-ITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTA 143 (275)
Q Consensus 65 ~~~~~l~~~~kP~Ia~v~G~a~GgG~~l-al~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG 143 (275)
..+.++.....|+|+.|.|.|.||+... ++.+|++++.++|.+++-... + ....++. . + .-
T Consensus 185 ~~l~~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~------v-----i~~~~~~-~----~--~e 246 (285)
T 2f9i_B 185 VSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRR------V-----IEQTINE-K----L--PD 246 (285)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHH------H-----HHHHHTS-C----C--CT
T ss_pred HHHHHHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHH------H-----HHHHhcc-c----c--hH
Confidence 3456666778999999999999998654 789999999999877652211 1 1112221 0 0 11
Q ss_pred CCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 144 RKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 144 ~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
.--+++.+.+.|+||.|+++ +++.+...++...+
T Consensus 247 ~~~~Ae~~~~~G~iD~Iv~~-~e~r~~l~~~L~~l 280 (285)
T 2f9i_B 247 DFQTAEFLLEHGQLDKVVHR-NDMRQTLSEILKIH 280 (285)
T ss_dssp TTTBHHHHHHTTCCSEECCG-GGHHHHHHHHHHHT
T ss_pred hHhhHHHHHhcCCccEEeCh-HHHHHHHHHHHHHh
Confidence 11246667899999999997 67776666655443
|
| >3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0026 Score=60.60 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=59.9
Q ss_pred HhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCC
Q psy14406 69 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIE 147 (275)
Q Consensus 69 ~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~ 147 (275)
.+.....|+|++|.|.|.|||......||++|+.++ +.+. + -|+ . ..+ ..+|+.++
T Consensus 192 ~ls~~giP~Isvv~G~~~GGga~~~a~~d~vim~e~~a~i~-------~-------------aGP-~-vik-~~~ge~~~ 248 (555)
T 3u9r_B 192 NMSARGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIF-------L-------------AGP-P-LVK-AATGEVVS 248 (555)
T ss_dssp HHHHTTCCEEEEECSCCBGGGGHHHHTSSEEEEETTTCBCB-------S-------------SCH-H-HHH-HHHCCCCC
T ss_pred HHhcCCCCEEEEEecCCCccHHHHHHhCCceEEecCCceEE-------E-------------ccH-H-HHH-HHhcCccC
Confidence 455567999999999999999999999999888764 5333 2 121 1 111 14789999
Q ss_pred HHHH-------HHcCCcccccCChhHHHHHHHHHHH
Q psy14406 148 AAEA-------RECGLVSKLYDDKESLLAGAIELGE 176 (275)
Q Consensus 148 a~eA-------~~~GLv~~vv~~~~~l~~~a~~~a~ 176 (275)
+++. ...|++|.++++.++....+.++..
T Consensus 249 ~e~LGGa~~h~~~sGv~d~v~~de~~a~~~~r~~ls 284 (555)
T 3u9r_B 249 AEELGGADVHCKVSGVADHYAEDDDHALAIARRCVA 284 (555)
T ss_dssp HHHHHBHHHHHHTTCSCSEEESSHHHHHHHHHHHHH
T ss_pred hhhccchhhhhhccCceeEEeCCHHHHHHHHHHHHH
Confidence 9887 7899999999973333333444443
|
| >1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0076 Score=57.16 Aligned_cols=84 Identities=21% Similarity=0.280 Sum_probs=57.1
Q ss_pred cCCCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCH--
Q psy14406 72 RCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEA-- 148 (275)
Q Consensus 72 ~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a-- 148 (275)
....|+|+.|.|.|.|||......||++|+.++ +.+++ .|+ . ..+. .+|+.++.
T Consensus 168 s~~iP~Isvv~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP-~-vi~~-~~ge~v~~e~ 224 (527)
T 1vrg_A 168 SGVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGP-N-VIKA-VTGEEISQED 224 (527)
T ss_dssp TTTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCH-H-HHHH-HHCCCCCHHH
T ss_pred CCCCCEEEEEeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCH-H-HHHH-HhCCCCCccc
Confidence 446999999999999999988889999999988 65332 121 1 1111 24666665
Q ss_pred ---HHHH--HcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 149 ---AEAR--ECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 149 ---~eA~--~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
.+.. ..|++|.++++..++.+.+.++...+
T Consensus 225 lggae~~~~~~G~vd~vv~d~~~~~~~~~~~Ls~l 259 (527)
T 1vrg_A 225 LGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYL 259 (527)
T ss_dssp HHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHTTS
T ss_pred cccHHHHhhcccceEEEecCHHHHHHHHHHHHHhc
Confidence 3333 69999999997444555554444433
|
| >1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0066 Score=57.51 Aligned_cols=111 Identities=18% Similarity=0.166 Sum_probs=69.2
Q ss_pred HHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHH----CCEEEEeCCceEeccccccCcccCchhhhhhhHHh-Cc---
Q psy14406 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITA----ADIRYATKDAWFTLKEVDIGLTADVGALQRLPRII-GN--- 132 (275)
Q Consensus 61 ~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~----~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-G~--- 132 (275)
+..-+++..+.....|+|+.|-|.+.|||...... +|++++.+++.+++- .+-|....+-+.. -.
T Consensus 385 ~~~Ak~l~~~~~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~-------gpegaa~Il~r~~i~~~~d 457 (522)
T 1x0u_A 385 RHGAKMLYAFAEATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVT-------GPEGAVRILYRKEIQQASN 457 (522)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESS-------CHHHHHHHHTSSSSSSSSS
T ss_pred HHHHHHHHHHHhCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEec-------CHHHHHHHHhhhhhhcccC
Confidence 34555677888899999999999999998865544 999999999877643 2222222222111 00
Q ss_pred -HHHHHHHHh--cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHh
Q psy14406 133 -QSLVNEIAF--TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179 (275)
Q Consensus 133 -~~~a~~l~l--tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la 179 (275)
.....++.- .-.--++..+++.|+||.|++. .++........+.+.
T Consensus 458 ~~~~~~~l~~~y~~~~~~~~~~~~~G~iD~II~p-~~tR~~L~~~L~~~~ 506 (522)
T 1x0u_A 458 PDDVLKQRIAEYRKLFANPYWAAEKGLVDDVIEP-KDTRRVIVAGLEMLK 506 (522)
T ss_dssp SSSSSHHHHHHHHHHHSSSHHHHHTTSSSEECCG-GGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHhcCCCcEeECH-HHHHHHHHHHHHHHh
Confidence 000001110 0012455779999999999997 677766655555543
|
| >1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.017 Score=54.74 Aligned_cols=113 Identities=16% Similarity=0.117 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHH----CCEEEEeCCceEeccccccCcccCchhhhhhhHHh----
Q psy14406 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITA----ADIRYATKDAWFTLKEVDIGLTADVGALQRLPRII---- 130 (275)
Q Consensus 59 ~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~----~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~---- 130 (275)
.++..-+++..+.....|+|+.|-|.+.|||..-... +|++++.++++++ +.++-|....+-+.-
T Consensus 388 ~~~~~A~~~~a~~~~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~ 460 (527)
T 1vrg_A 388 IIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEAS 460 (527)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcc
Confidence 3445566778888899999999999999887754433 8988888887766 444444443333321
Q ss_pred CcHHHH-HHHHh--cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHh
Q psy14406 131 GNQSLV-NEIAF--TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179 (275)
Q Consensus 131 G~~~~a-~~l~l--tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la 179 (275)
...... .++.- .-.--++..+.+.|+||.|+++ .++........+.+.
T Consensus 461 ~d~~~~~~~~~~~y~~~~~~p~~~~~~g~iD~II~p-~~tR~~l~~~L~~l~ 511 (527)
T 1vrg_A 461 SNPEETRRKLIEEYKQQFANPYIAASRGYVDMVIDP-RETRKYIMRALEVCE 511 (527)
T ss_dssp SCHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEECCG-GGHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHhhCCHHHHHHcCCCCeeeCH-HHHHHHHHHHHHHHh
Confidence 000111 11221 1123667889999999999986 666665555554443
|
| >1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.03 Score=53.74 Aligned_cols=116 Identities=13% Similarity=0.055 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHH-----C--CEEEEeCCceEeccccccCcccCchhhhhhhHHh
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITA-----A--DIRYATKDAWFTLKEVDIGLTADVGALQRLPRII 130 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~-----~--D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~ 130 (275)
..++..-+++..+..+..|+|+.|-|.+.|||. ++++ . |++++.++++++ +.++-|....+-+.-
T Consensus 428 Gi~~~gA~~~~a~a~a~vP~itvI~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~ 499 (587)
T 1pix_A 428 ELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRR 499 (587)
T ss_dssp THHHHHHHHHHHHHTCCCCEEEEECSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhh
Confidence 345566778899999999999999999998875 4444 4 888888888766 444444433333221
Q ss_pred CcH------------HHHHHHHh-cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCC
Q psy14406 131 GNQ------------SLVNEIAF-TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182 (275)
Q Consensus 131 G~~------------~~a~~l~l-tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~ 182 (275)
-.. ....++.- .-+..++..+.+.|+||.|+++ .+.........+.+...+
T Consensus 500 ~~~~~~~g~~~~~~~~~~~~~~~~y~~~~~p~~aa~~g~iD~VI~p-~~tR~~l~~~L~~~~~~~ 563 (587)
T 1pix_A 500 LAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVDM-NKIRGYVEAFTEAAYQNP 563 (587)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHHHTTSHHHHHHHTSSSEECCT-TTHHHHHHHHHHHHTTSC
T ss_pred hhhhhhcCCChHHHHHHHHHHHHHHHHhCCHHHHHhcCCCccccCH-HHHHHHHHHHHHHHhcCC
Confidence 000 00011110 0124788999999999999987 677776666666665555
|
| >1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.029 Score=53.17 Aligned_cols=112 Identities=19% Similarity=0.125 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHH----CCEEEEeCCceEeccccccCcccCchhhhhhhHHh----
Q psy14406 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITA----ADIRYATKDAWFTLKEVDIGLTADVGALQRLPRII---- 130 (275)
Q Consensus 59 ~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~----~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~---- 130 (275)
.++..-+++..+.....|+|+.|-|.+.|||+.-... +|++++.++++++ +.++-|....+-+.-
T Consensus 384 i~~~~A~~l~a~a~~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~ 456 (523)
T 1on3_A 384 IIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAA 456 (523)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcc
Confidence 3455667788888899999999999999988755544 7888887777665 444444443343321
Q ss_pred CcHHHHH-HHHh--cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 131 GNQSLVN-EIAF--TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 131 G~~~~a~-~l~l--tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
......+ ++.- .-.--++..+.+.|+||.|+++ .++........+.+
T Consensus 457 ~d~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II~p-~~tR~~l~~~L~~l 506 (523)
T 1on3_A 457 DDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDP-ADTRRKIASALEMY 506 (523)
T ss_dssp SCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCG-GGHHHHHHHHHHHG
T ss_pred cCHHHHHHHHHHHHHHhhCCHHHHHhcCCCCEeeCH-HHHHHHHHHHHHHH
Confidence 0001111 1221 1112566789999999999986 66666555544444
|
| >3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.029 Score=53.69 Aligned_cols=106 Identities=17% Similarity=0.217 Sum_probs=64.0
Q ss_pred HhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEecccccc--CcccCchhhhhhhHH---hCcHHHHHHHHhcC
Q psy14406 69 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI--GLTADVGALQRLPRI---IGNQSLVNEIAFTA 143 (275)
Q Consensus 69 ~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~--G~~p~~g~~~~l~r~---~G~~~~a~~l~ltG 143 (275)
.+.....|+|+.|-|.|.|||...++.+|++++.+++.+.+....+ |+-|.+ ...+.- +. ...+.+-..+.
T Consensus 177 ~ls~~~iP~Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g---~~~~~~~~~~~-~~~~ge~~vs~ 252 (588)
T 3gf3_A 177 ELNQLGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG---YIDDEAAEQII-AAQIENSKLKV 252 (588)
T ss_dssp HHHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHH-HHHHHHHHTTC
T ss_pred HHhcCCCCEEEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc---cccccchhhhh-hhhccccccCh
Confidence 4445679999999999999998778888888888888877654331 111110 001100 00 01111222477
Q ss_pred CCCCHHHHH--HcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 144 RKIEAAEAR--ECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 144 ~~~~a~eA~--~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
+.+.+.+.. ..|++|.++++.++..+.+.++...|
T Consensus 253 eeLGGa~~h~~~sGv~d~~a~de~~al~~~r~~ls~L 289 (588)
T 3gf3_A 253 PAPGSVPIHYDETGFFREVYQNDLGVIDGIKKYISYL 289 (588)
T ss_dssp CCTTBHHHHTTTSCCSCEEESSHHHHHHHHHHHHHTS
T ss_pred hhccchhhhccccccceEEeCCHHHHHHHHHHHHHhC
Confidence 788888877 59999999988433444455554443
|
| >2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0043 Score=61.15 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=32.5
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCCceEe
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKDAWFT 108 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~ 108 (275)
..|+|+.|.|.|.|||..+...||++|+.+++.+.
T Consensus 259 ~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~ 293 (793)
T 2x24_A 259 EIVTISMVSCRALGIGAYLVRLGQRVIQVENSHII 293 (793)
T ss_dssp HSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEE
T ss_pred CCCEEEEEecCCchHHHHHHhhCCeEEEeccccEE
Confidence 69999999999999999999999999999987654
|
| >3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.025 Score=55.38 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=31.1
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCCce
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKDAW 106 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~ 106 (275)
..|+|+.|.|.|.|||..+...||++|+.+++.
T Consensus 246 ~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~ 278 (758)
T 3k8x_A 246 DIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQP 278 (758)
T ss_dssp TSCEEEEECSCEETHHHHHHHHTCEEEEETTCC
T ss_pred CCCEEEEEccCCchHHHHHHhhCCEEEEECCce
Confidence 689999999999999999999999999999864
|
| >2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A | Back alignment and structure |
|---|
Probab=95.40 E-value=0.038 Score=52.58 Aligned_cols=111 Identities=16% Similarity=0.147 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhhHH-hC---
Q psy14406 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI-IG--- 131 (275)
Q Consensus 60 ~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~G--- 131 (275)
++..-+++..+.....|+|+.|-|.+.|||..... .+|++++.++++++ +..+-|....+.+. +-
T Consensus 406 ~~~ga~~l~a~~~~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~-------Vmgpegaa~Il~r~~~~~~~ 478 (548)
T 2bzr_A 406 IRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAA 478 (548)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTCCC-----
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEE-------ecCHHHHHHHHhhhHHhhhh
Confidence 34455667788889999999999999998875543 48999888888776 33333333333221 10
Q ss_pred -----cHHHHHHHHh--cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 132 -----NQSLVNEIAF--TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 132 -----~~~~a~~l~l--tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
......++.- .-.--++..+.+.|+||.|+++ .+.........+.+
T Consensus 479 ~~g~~~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II~p-~~tR~~l~~~L~~l 531 (548)
T 2bzr_A 479 ANGEDIDKLRLRLQQEYEDTLVNPYVAAERGYVGAVIPP-SHTRGYIGTALRLL 531 (548)
T ss_dssp -----CHHHHHHHHHHHHHHHSBSHHHHHTTSSSEECCG-GGHHHHHHHHHHHT
T ss_pred cccccHHHHHHHHHHHHHHhhCCHHHHHhcCCCceeeCH-HHHHHHHHHHHHHH
Confidence 0000111211 0012345678999999999987 66665554444433
|
| >3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.11 Score=49.06 Aligned_cols=111 Identities=18% Similarity=0.222 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHH-----CCEEEEeCCceEeccccccCcccCchhhhhhhHH-h
Q psy14406 57 RKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITA-----ADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI-I 130 (275)
Q Consensus 57 ~~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~-----~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~ 130 (275)
...++..-+++..+.....|+|+.|-|.+.|||. ++++ .|++++.++++++. .++-|....+-+. +
T Consensus 388 ~gi~~~~Ak~l~a~a~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~V-------m~~egaa~il~r~~~ 459 (530)
T 3iav_A 388 DGIIRRGAKLIFAYAEATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIAV-------MGAQGAVNILHRRTI 459 (530)
T ss_dssp TTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTSTTT
T ss_pred hhHHHHHHHHHHHHHhCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEec-------CCHHHHHHHHhhhhh
Confidence 3445666778889999999999999999998776 4444 79998888887764 3333332222221 1
Q ss_pred C-----cHHHHHHHH--hcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHH
Q psy14406 131 G-----NQSLVNEIA--FTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176 (275)
Q Consensus 131 G-----~~~~a~~l~--ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~ 176 (275)
- +...-.++. +.-+..++..|.+.|++|.|+++ .+.........+
T Consensus 460 ~~~~~d~~~~~~~~~~~y~~~~~~p~~aa~~~~vD~VIdP-~~TR~~l~~~l~ 511 (530)
T 3iav_A 460 ADAGDDAEATRARLIQEYEDALLNPYTAAERGYVDAVIMP-SDTRRHIVRGLR 511 (530)
T ss_dssp STTCTTCHHHHHHHHHHHHHHHSSSHHHHHTTSSSEECCG-GGHHHHHHHHHH
T ss_pred hhcccCHHHHHHHHHHHHHHhcCCHHHHHhcCCCCcccCH-HHHHHHHHHHHH
Confidence 1 001111111 11112466778899999999987 566655444333
|
| >3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B | Back alignment and structure |
|---|
Probab=94.48 E-value=0.32 Score=46.22 Aligned_cols=112 Identities=11% Similarity=0.015 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhh---HH-h
Q psy14406 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLP---RI-I 130 (275)
Q Consensus 59 ~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~---r~-~ 130 (275)
.++..-+++..+.....|+|+.|-|.+.|||..-+. .+|++++.++++++. ..+-+....|. +. +
T Consensus 410 i~~~gAk~~~a~~~a~vP~itvi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~V-------mgpegaa~il~~~~~~~~ 482 (555)
T 3u9r_B 410 IAKHGAKLVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGV-------MGGEQAAGVLAQVKREQA 482 (555)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEEEEEETTHHHHTTCGGGCCSEEEECTTCEEES-------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCCccchhhHhhcCccCCCCeEEEcCCcEEEc-------CCHHHHHHHHHHHHHHHH
Confidence 345566778889999999999999998887654332 379999888887763 33333333322 10 0
Q ss_pred ---C----cH--H-HHHHHH-hcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 131 ---G----NQ--S-LVNEIA-FTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 131 ---G----~~--~-~a~~l~-ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
| .. . ...++. ..-+..++-.|.+.|++|.|+++ .+.........+.+
T Consensus 483 ~~~g~~~~~~~~~~~~~~~~~~y~~~~~p~~aa~r~~vD~vIdP-~~TR~~l~~~l~~~ 540 (555)
T 3u9r_B 483 ERAGQQLGVEEEAKIKAPILEQYEHQGHPYYSSARLWDDGVIDP-AQTREVLALALSAA 540 (555)
T ss_dssp HTTTCCCCHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCBCCG-GGHHHHHHHHHHHH
T ss_pred HhccCCCCcchHHHHHHHHHHHHHHhCCHHHHhhccccCcccCh-HHHHHHHHHHHHHH
Confidence 0 00 0 000000 00112466667788999999987 56655544433333
|
| >3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} | Back alignment and structure |
|---|
Probab=94.26 E-value=0.11 Score=49.15 Aligned_cols=106 Identities=19% Similarity=0.250 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHH----CCEEEEeCCceEeccccccCcccCchhhhhhhH-HhC-
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITA----ADIRYATKDAWFTLKEVDIGLTADVGALQRLPR-IIG- 131 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~----~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~G- 131 (275)
..++..-+++..+.....|+|+.|-|.+.|||..-... +|++++.++++++. .++-|....+-+ .+-
T Consensus 395 Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~V-------m~pegaa~Il~r~~~~~ 467 (531)
T 3n6r_B 395 GVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAV-------MGAKGATEIIHRGDLGD 467 (531)
T ss_dssp THHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHCCTTTTS
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEec-------CCHHHHHHHHhcccccc
Confidence 34566678889999999999999999999988754443 89998888887664 333333222211 110
Q ss_pred ---cHHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHH
Q psy14406 132 ---NQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173 (275)
Q Consensus 132 ---~~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~ 173 (275)
...+..+. .-+.-++..|.+.|++|.|+++ .+.......
T Consensus 468 ~~~~~~~~~~y--~~~~~~p~~aa~~~~vD~vIdP-~~TR~~l~~ 509 (531)
T 3n6r_B 468 PEKIAQHTADY--EERFANPFVASERGFVDEVIQP-RSTRKRVAR 509 (531)
T ss_dssp TTHHHHHHHHH--HHHHSSSHHHHHHTSSSEECCG-GGHHHHHHH
T ss_pred hhHHHHHHHHH--HHHhcCHHHHHhcCccCcccCH-HHHHHHHHH
Confidence 00111111 1112455678899999999987 556554433
|
| >3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* | Back alignment and structure |
|---|
Probab=92.65 E-value=0.35 Score=46.25 Aligned_cols=116 Identities=13% Similarity=0.102 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHC-------CEEEEeCCceEeccccccCcccCchhhhhhhHH-
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAA-------DIRYATKDAWFTLKEVDIGLTADVGALQRLPRI- 129 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~-------D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~- 129 (275)
..++...+++..+..+..|+|+.|-|.+.|||. +++++ |++++.++++++ +.++-|....+-+.
T Consensus 430 Gi~~~gAk~l~a~a~a~VP~itvI~g~~~Ggg~-~am~~~~~~~~~~~~~awp~A~~s-------Vm~pEgaa~Il~~~~ 501 (588)
T 3gf3_A 430 ELLGLGQSLIYSIENSKLPSLEITIRKASAAAH-YVLGGPQGNNTNVFSIGTGACEYY-------VMPGETAANAMYSRK 501 (588)
T ss_dssp THHHHHHHHHHHHHHHCSCEEEEESSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCCccHHHH-HHhcccccCCccceEEECCCceEE-------eCCHHHHHHHHhhhH
Confidence 345666778889999999999999999988766 44443 377777777666 44444443333221
Q ss_pred hC-cH----------HHHHHHH-hcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhcCC
Q psy14406 130 IG-NQ----------SLVNEIA-FTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182 (275)
Q Consensus 130 ~G-~~----------~~a~~l~-ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~ 182 (275)
+- .. ....++. -.-+..++--|.+.|++|.|+++ .+.......++....+.|
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~~aA~r~~vD~VIdP-~~TR~~l~~~~~~~~~~p 565 (588)
T 3gf3_A 502 LVKAKKAGEDLQPIIGKMNDMIQMYTDKSRPKYCTEKGMVDEIVDM-TEVRPYIQAFTEAAYQNP 565 (588)
T ss_dssp HHHC-------CHHHHHHHHHHHHHHHTTSHHHHHHTTSSSEECCG-GGHHHHHHHHHHHHTTSC
T ss_pred HhhhhccccccchHHHHHHHHHHHHHHhCCHHHHHhcCCCCeeeCH-HHHHHHHHHHHHHHHcCC
Confidence 11 00 0000111 00123578888999999999997 677777666666555443
|
| >3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=92.26 E-value=0.13 Score=47.23 Aligned_cols=42 Identities=12% Similarity=-0.087 Sum_probs=35.3
Q ss_pred HhccccccccccCCcchhhHHHHHhccCccChHHHHHHHHHh
Q psy14406 222 NKGVSPERMSHDCPECLIGSIGVFHTLDRVDLNQCDEDLALL 263 (275)
Q Consensus 222 ~e~~~~~~~~~~sp~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
+...++..+.+.||+|++++.++++++..+++++||+.+...
T Consensus 306 ~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~ 347 (407)
T 3ju1_A 306 WLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTV 347 (407)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHH
Confidence 344456778899999999999999999999999999876543
|
| >4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=90.80 E-value=0.17 Score=45.43 Aligned_cols=109 Identities=7% Similarity=0.056 Sum_probs=65.0
Q ss_pred CCHHHHHHcCCcccccCChhHHHH-----------HHHHHHHHHhcCCHHH-------------HHHHHHHHHhhhc-CC
Q psy14406 146 IEAAEARECGLVSKLYDDKESLLA-----------GAIELGELIASKSPVA-------------VQGTKKTLVFSRD-HA 200 (275)
Q Consensus 146 ~~a~eA~~~GLv~~vv~~~~~l~~-----------~a~~~a~~la~~~~~a-------------~~~~K~~l~~~~~-~~ 200 (275)
+.+..|.++.|.-+.++. ++..+ +..+.+.+++.....+ +...+..++..+. .+
T Consensus 160 l~g~~a~~l~ltG~~i~A-~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~ 238 (353)
T 4hdt_A 160 APGKLGLHAALTGAPFSG-ADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDT 238 (353)
T ss_dssp SSTTHHHHHHHHCCCBCH-HHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSS
T ss_pred hhhHHHHHHHhcCCCCCH-HHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCC
Confidence 334567788787777775 44333 2455666665432221 2222333333322 24
Q ss_pred HHHHHHHHHHHhhcccCCchHHhccccccccccCCcchhhHHHHHhccCcc-ChHHHHHHHHH
Q psy14406 201 VEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCPECLIGSIGVFHTLDRV-DLNQCDEDLAL 262 (275)
Q Consensus 201 ~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp~~~~v~~~~~~~~~~~-~~~~~~~~~~~ 262 (275)
+++.+...... ...+...++..+.++||+|+++++++++++..+ |+++||+.+.-
T Consensus 239 ~~~i~~~L~~~-------~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~ 294 (353)
T 4hdt_A 239 VADIIAALRAH-------DAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYR 294 (353)
T ss_dssp HHHHHHHHHHH-------CSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence 44444443322 112234556778899999999999999999887 89999987643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 275 | ||||
| d1mj3a_ | 260 | c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat | 1e-29 | |
| d1dcia_ | 275 | c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2 | 4e-21 | |
| d1pjha_ | 266 | c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2 | 6e-17 | |
| d1uiya_ | 253 | c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The | 5e-13 | |
| d1q52a_ | 297 | c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacter | 4e-11 | |
| d2f6qa1 | 245 | c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-C | 1e-08 | |
| d1hzda_ | 266 | c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [T | 1e-08 | |
| d1szoa_ | 249 | c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus | 2e-06 | |
| d2a7ka1 | 230 | c.14.1.3 (A:1-230) Carbapenem biosynthes protein C | 5e-06 | |
| d1sg4a1 | 249 | c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-d | 0.002 |
| >d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 110 bits (276), Expect = 1e-29
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++ E+ I+L+ K F AG D+ M + +
Sbjct: 38 ELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGK------------ 85
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + R KPVI+AV+G +GGG L DI YA + A F E+ +G
Sbjct: 86 --FLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGA 143
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL E+ T +I A +A++ GLVSK++ + + AI+ E IA+
Sbjct: 144 GGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETL-VEEAIQCAEKIAN 201
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
S + V K+++ + + + EG
Sbjct: 202 NSKIIVAMAKESVNAAFEMTLTEGN 226
|
| >d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 87.9 bits (216), Expect = 4e-21
Identities = 114/206 (55%), Positives = 159/206 (77%), Gaps = 1/206 (0%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S + +DVAR + LR LI
Sbjct: 35 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQ-PPGDDVARIAWYLRDLI 93
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ YQK+ + +E+CPKPVI+A+HG CIGGG+ LI+A DIRY T+DA+F +KEVD+GL ADV
Sbjct: 94 SRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADV 153
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP++IGN+SLVNE+ FTARK+ A EA + GLVS+++ DK+ +L A L I+S
Sbjct: 154 GTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISS 213
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLN 206
KSPVAVQG+K L++SRDH+V+E L+
Sbjct: 214 KSPVAVQGSKINLIYSRDHSVDESLD 239
|
| >d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 76.3 bits (186), Expect = 6e-17
Identities = 38/223 (17%), Positives = 73/223 (32%), Gaps = 9/223 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE + N + I+ ++G+ F++G D G+ + + + SK + +
Sbjct: 36 YLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGD-DTNKYPSETSKWVSNFV 94
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + K +I ++G IG +L+ DI Y+ D + L
Sbjct: 95 ARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITE 154
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLL-----AGAIELG 175
G + + E + + E G +SK ++ S EL
Sbjct: 155 GGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELR 214
Query: 176 ELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDR 218
E + + G KK L + A + E
Sbjct: 215 EKVKGLYLPSCLGMKKLLKSNHIDAFNKAN---SVEVNESLKY 254
|
| >d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Thermus thermophilus [TaxId: 274]
Score = 65.1 bits (157), Expect = 5e-13
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + D L + R ++L+ GK F+AG DL+ + + ++ +
Sbjct: 30 SLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFL---------ERVTELGAEENYRHS 80
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + PKP ++AV+G + GG L A D+ ++A EV IG A +
Sbjct: 81 LSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAAL 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ L R +G + ++ T R +EA EA+ GLV++ L A L E +A
Sbjct: 141 VS-VILVRAVGEK-AAKDLLLTGRLVEAREAKALGLVNR-IAPPGKALEEAKALAEEVAK 197
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
+P +++ TK+ L+ +E+G
Sbjct: 198 NAPTSLRLTKELLLALPGMGLEDGF 222
|
| >d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Naphthoate synthase MenB species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 59.8 bits (143), Expect = 4e-11
Identities = 46/212 (21%), Positives = 75/212 (35%), Gaps = 9/212 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIA------EQEDVARKSK 54
E+ D + + V++L+ G G + D A
Sbjct: 51 ELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVD 110
Query: 55 ILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVD 113
+ R + + PK VI V+G GGG SL D+ A+++ A F + D
Sbjct: 111 VARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDAD 170
Query: 114 IGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173
+G L R +G + EI F R A + + G V+ + + E ++
Sbjct: 171 VGSFDGGYGSAYLARQVGQKF-AREIFFLGRTYTAEQMHQMGAVNAVAEHAEL-ETVGLQ 228
Query: 174 LGELIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
I +KSP A + K D V + L
Sbjct: 229 WAAEINAKSPQAQRMLKFAFNLLDDGLVGQQL 260
|
| >d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.4 bits (124), Expect = 1e-08
Identities = 37/205 (18%), Positives = 82/205 (40%), Gaps = 11/205 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI + ++ + +L+ G +++G DL+ + E++ +
Sbjct: 34 EIMRALKAA-SKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKA--------KNNA 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
++ + PKP+I+ V+G +G ++L+ D YA+ A F +G + +
Sbjct: 85 VLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEG 144
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ P+I+ E+ +K+ A EA GLV++++ D + A
Sbjct: 145 CSSYTFPKIMSPAK-ATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKE-VWTRLKAFAK 202
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P A++ +K+ + +
Sbjct: 203 LPPNALRISKEVIRKREREKLHAVN 227
|
| >d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: AUH protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.1 bits (123), Expect = 1e-08
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 15/208 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + D+L +++ R II+ + + V++ ++ +
Sbjct: 37 MLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIA 96
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
P P I+A+ G +GGG+ L A DIR A A L E + +
Sbjct: 97 -----------NLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGG 145
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLA---GAIELGEL 177
G QRLPR I SL E+ F+AR ++ EA+ GL+S + + + A A++L
Sbjct: 146 GGTQRLPRAI-GMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLARE 204
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ PVA++ K + + + GL
Sbjct: 205 FLPQGPVAMRVAKLAINQGMEVDLVTGL 232
|
| >d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: 6-oxo camphor hydrolase species: Rhodococcus erythropolis [TaxId: 1833]
Score = 45.5 bits (106), Expect = 2e-06
Identities = 43/207 (20%), Positives = 78/207 (37%), Gaps = 14/207 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ CF ++ + E +V+IL+ G F EI ++I
Sbjct: 44 ELAYCFHDIACDRENKVVILTGTGPSFC------------NEIDFTSFNLGTPHDWDEII 91
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q+ +++L PVI+AV+G +DI A + A F
Sbjct: 92 FEGQRLLNNLLSIEVPVIAAVNGPVTNAPEI-PVMSDIVLAAESATFQDGPHFPSGIVPG 150
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
+ + + T ++++A A + G V+++ + + LL A EL IA
Sbjct: 151 DGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSE-QELLPRAWELARGIAE 209
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
K +A + +K L +E L+
Sbjct: 210 KPLLARRYARKVLTRQLRRVMEADLSL 236
|
| >d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Carbapenem biosynthes protein CarB species: Pectobacterium carotovorum [TaxId: 554]
Score = 44.1 bits (102), Expect = 5e-06
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ +LL AI ++AS A TK+ + H +E+
Sbjct: 178 VVESSALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQTR 222
|
| >d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 36.4 bits (82), Expect = 0.002
Identities = 6/45 (13%), Positives = 14/45 (31%)
Query: 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+E + + A+ + A Q TK + + +
Sbjct: 183 VVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQR 227
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 275 | |||
| d1wz8a1 | 263 | Probable enoyl-CoA hydratase TTHA0218 {Thermus the | 100.0 | |
| d2fw2a1 | 258 | Chromodomain protein CDY2A {Human (Homo sapiens) [ | 100.0 | |
| d1mj3a_ | 260 | Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve | 100.0 | |
| d1nzya_ | 269 | 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., | 100.0 | |
| d1dcia_ | 275 | Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso | 100.0 | |
| d1hzda_ | 266 | AUH protein {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uiya_ | 253 | Enoyl-CoA hydratase (crotonase) {Thermus thermophi | 100.0 | |
| d2f6qa1 | 245 | Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human ( | 100.0 | |
| d2a7ka1 | 230 | Carbapenem biosynthes protein CarB {Pectobacterium | 100.0 | |
| d1sg4a1 | 249 | Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso | 100.0 | |
| d1wdka4 | 310 | Fatty oxidation complex alpha subunit, N-terminal | 100.0 | |
| d1ef8a_ | 261 | Methylmalonyl CoA decarboxylase {Escherichia coli | 100.0 | |
| d1q52a_ | 297 | Naphthoate synthase MenB {Mycobacterium tuberculos | 100.0 | |
| d1pjha_ | 266 | Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso | 100.0 | |
| d1szoa_ | 249 | 6-oxo camphor hydrolase {Rhodococcus erythropolis | 100.0 | |
| d2cbya1 | 179 | Clp protease, ClpP subunit {Mycobacterium tubercul | 97.94 | |
| d1yg6a1 | 183 | Clp protease, ClpP subunit {Escherichia coli [TaxI | 97.93 | |
| d2f6ia1 | 190 | Clp protease, ClpP subunit {Plasmodium falciparum | 97.78 | |
| d1y7oa1 | 192 | Clp protease, ClpP subunit {Streptococcus pneumoni | 97.63 | |
| d1tg6a1 | 193 | Clp protease, ClpP subunit {Human (Homo sapiens), | 97.62 | |
| d2f9ya1 | 316 | Acetyl-coenzyme A carboxylase carboxyl transferase | 97.54 | |
| d1on3a1 | 253 | Methylmalonyl-CoA carboxyltransferase (transcarbox | 97.33 | |
| d1xnya1 | 258 | Propionyl-CoA carboxylase complex B subunit, PccB | 97.23 | |
| d2f9yb1 | 263 | Acetyl-coenzyme A carboxylase carboxyl transferase | 97.09 | |
| d1vrga1 | 251 | Propionyl-CoA carboxylase complex B subunit, PccB | 97.08 | |
| d1pixa2 | 287 | Glutaconyl-CoA decarboxylase A subunit {Acidaminoc | 97.04 | |
| d2a7sa1 | 258 | Propionyl-CoA carboxylase complex B subunit, PccB | 97.02 | |
| d1uyra1 | 333 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 96.35 | |
| d1vrga2 | 264 | Propionyl-CoA carboxylase complex B subunit, PccB | 94.91 | |
| d2a7sa2 | 271 | Propionyl-CoA carboxylase complex B subunit, PccB | 94.79 | |
| d1xnya2 | 263 | Propionyl-CoA carboxylase complex B subunit, PccB | 94.42 | |
| d1on3a2 | 264 | Methylmalonyl-CoA carboxyltransferase (transcarbox | 93.97 | |
| d1pixa3 | 299 | Glutaconyl-CoA decarboxylase A subunit {Acidaminoc | 92.21 | |
| d1uyra2 | 404 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 89.4 |
| >d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Probable enoyl-CoA hydratase TTHA0218 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.1e-47 Score=333.15 Aligned_cols=220 Identities=20% Similarity=0.279 Sum_probs=198.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|++||+|||+|.|++||+|+|++++..... .......++...++++..+.++||||||+
T Consensus 40 el~~~~~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~~----------~~~~~~~~~~~~~~~~~~i~~~~kPvIa~ 109 (263)
T d1wz8a1 40 GLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRA----------SHEALLRVFWEARDLVLGPLNFPRPVVAA 109 (263)
T ss_dssp HHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHH----------CHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHHhhCCCCeEEEEecccccccccchhhhhhhhcc----------cccccccchhhhhHHHHHhhhhhcceeee
Confidence 57889999999999999999999999999999998854321 11223455667788899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|+.|+++++++++|. .++++++++|++++++||+++||||++
T Consensus 110 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~~G~-~~a~~l~l~g~~i~a~eA~~~Glv~~v 188 (263)
T d1wz8a1 110 VEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGM-AKAKYHLLLNEPLTGEEAERLGLVALA 188 (263)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCH-HHHHHHHHHTCCEEHHHHHHHTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-chhhhhcccccccchhHHHhcCCcccc
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
||+ +++.+++.+++++|++.||.+++.+|+.++....... +.++.+.......+.++|++||+.++..+|+
T Consensus 189 v~~-~~l~~~a~~~a~~la~~~~~al~~~K~~l~~~~~~~~-~~~~~e~~~~~~~~~s~d~~Egi~Af~eKR~ 259 (263)
T d1wz8a1 189 VED-EKVYEKALEVAERLAQGPKEALHHTKHALNHWYRSFL-PHFELSLALEFLGFSGKELEEGLKALKEKRP 259 (263)
T ss_dssp ECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHGGGSHHHHHHHHHHHTTSC
T ss_pred cch-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHHHHhChH-HHHHHHHHHHHHHccCHHHHHHHHHHhCCCC
Confidence 997 8999999999999999999999999999998877555 4577777777778899999999999998764
|
| >d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Chromodomain protein CDY2A species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-47 Score=330.31 Aligned_cols=222 Identities=19% Similarity=0.327 Sum_probs=200.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.++.| ++++|||+|.|++||+|+|++++.....+ .......++.+.+++++..+.++|||+||+
T Consensus 34 el~~al~~~~~d-~~~~vvl~g~g~~FsaG~Dl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaa 104 (258)
T d2fw2a1 34 EMVNALNSAAAD-DSKLVLFSAAGSVFCCGLDFGYFVRHLRN--------DRNTASLEMVDTIKNFVNTFIQFKKPIVVS 104 (258)
T ss_dssp HHHHHHHHHHHS-SCSEEEEEECSSCSBCCBCHHHHHHHHHH--------CHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHcC-CCEEEEEecCccccccccccchhhhcccc--------cccchhhHHHHHHHHHHHhhhccceeeeee
Confidence 478899999887 56999999999999999999998643221 111223456677888999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. .++++|++||++++|+||+++||||++
T Consensus 105 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ig~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 183 (258)
T d2fw2a1 105 VNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK-ASANEMLIAGRKLTAREACAKGLVSQV 183 (258)
T ss_dssp ECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH-HHHHHHHTTCCEEEHHHHHHTTSCSEE
T ss_pred cccccccccccccccccccceecccceeeccccccccccccccccchhhcCc-cccchhhccCccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
|++ +++.+++.+++++|++.||.+++.+|+.++.....++++.++.+...+...+.++|++||+.+++.+|+
T Consensus 184 v~~-~~l~~~a~~~a~~i~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egi~af~EKR~ 255 (258)
T d2fw2a1 184 FLT-GTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKI 255 (258)
T ss_dssp ECS-TTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHSSC
T ss_pred ccc-cccccccchhhhhhhhhhHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCC
Confidence 997 899999999999999999999999999999988888999999998888888999999999999987653
|
| >d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.4e-47 Score=331.17 Aligned_cols=218 Identities=29% Similarity=0.423 Sum_probs=199.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|++++.|+++++|||+|.|+.||+|+|++++..... . ..+...++.++..+.++||||||+
T Consensus 38 ~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~------~--------~~~~~~~~~~~~~~~~~~kPvIaa 103 (260)
T d1mj3a_ 38 ELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTF------Q--------DCYSGKFLSHWDHITRIKKPVIAA 103 (260)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCH------H--------HHHHC--CCGGGGGGGCSSCEEEE
T ss_pred HHHHHHHHHHhCCCcceEEEecccccccccchhhhhhccch------h--------hhhHHHHHHHHHHhccCCCeEEEE
Confidence 47889999999999999999999999999999998864321 0 122334566778899999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+ +++++++++|++++++||+++|||+++
T Consensus 104 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~ig~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 182 (260)
T d1mj3a_ 104 VNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGK-SLAMEMVLTGDRISAQDAKQAGLVSKI 182 (260)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCH-HHHHHHHHHCCCEEHHHHHHHTSCSEE
T ss_pred EcCeEeHHHHHHHHHCCEEEEcCCCEEECchhccCcCCcccHHHHHHHHhCH-HHHHHHHHcCcccCchhhccCCCceee
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
++. +++.+.+.+++.+++..+|.+++.+|+.++.....++++.++.+...+...+.++|++|++.+++.+|+.
T Consensus 183 ~~~-~~~~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~~~~~~s~d~~egi~aFleKR~P 255 (260)
T d1mj3a_ 183 FPV-ETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKA 255 (260)
T ss_dssp ECT-TTHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCC
T ss_pred ecc-cccccccccccccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCC
Confidence 998 8899999999999999999999999999999999999999999999999999999999999999876643
|
| >d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: 4-Chlorobenzoyl-CoA dehalogenase species: Pseudomonas sp., strain CBS-3 [TaxId: 306]
Probab=100.00 E-value=7.1e-46 Score=325.44 Aligned_cols=227 Identities=21% Similarity=0.283 Sum_probs=205.3
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+++++|+++++|||+|.|++||+|+|++++..... ..........+...++.++.++.++|||+||+
T Consensus 34 el~~~l~~~~~d~~i~~vvltg~g~~F~aG~Dl~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaa 106 (269)
T d1nzya_ 34 EVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKG-------VAGVRDHFRIAALWWHQMIHKIIRVKRPVLAA 106 (269)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSH-------HHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEeCCcccccchhhHHHHhhccc-------ccchhhHHHHHHHHHHHHHHHHHhhcchhehh
Confidence 57889999999999999999999999999999998853221 11111223444556778999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||.++|++|++|+++++++++|. .+++++++||++++|+||+++||||++
T Consensus 107 v~G~a~GgG~~lal~~D~ria~~~a~~~~~~~~~g~~~~~g~~~~l~~~ig~-~~a~~l~ltg~~i~a~eA~~~Glv~~v 185 (269)
T d1nzya_ 107 INGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGM-RRAMELMLTNRTLYPEEAKDWGLVSRV 185 (269)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHH-HHHHHHHHHCCCBCHHHHHHHTSCSCE
T ss_pred hhhhcCCCceeeeecccHhhhhhhhhhcccccccccccccccccccccccCh-hhhhhccccccccchhHHHHcCCcccc
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccCCc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCPE 236 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~sp~ 236 (275)
+++ +++.+++.+++++|++.||.+++.+|+.++.....++++.++.+.......+.+++++|++.+++.+|+.+.
T Consensus 186 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~~~~e~v~aflekrkp~~ 260 (269)
T d1nzya_ 186 YPK-DEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADR 260 (269)
T ss_dssp ECH-HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTC
T ss_pred ccc-cccccchhhhhhhhhhhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHCCCCCCc
Confidence 996 999999999999999999999999999999999999999999999888889999999999999988776654
|
| >d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.4e-46 Score=325.39 Aligned_cols=233 Identities=50% Similarity=0.838 Sum_probs=205.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+.+++|+++++|||+|.|++||+|+|+.++.....+... ....+.......+...++.++..+.++||||||+
T Consensus 35 el~~~l~~~~~d~~v~~vvltg~~~~F~aG~dl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaa 113 (275)
T d1dcia_ 35 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPG-DDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAA 113 (275)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCC-SSHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEeccccccccCccHHHhhhccccccc-ccccchhhhhccchhhhHHHHHHHHhcCCCEEEE
Confidence 578999999999999999999999999999999987643221100 1112223345566777888999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|+.|+++++++++|....+++++++|++++++||+++||||+|
T Consensus 114 v~G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~~~~~~~~~~~g~~~~~~~ll~~g~~~~a~eA~~~Glv~~v 193 (275)
T d1dcia_ 114 IHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRV 193 (275)
T ss_dssp ECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEE
T ss_pred EeeEeehhhHHHHhhcCchhhccCccccchhcccccccccccccccccccccccccccccccccccchhhhccCCCceee
Confidence 99999999999999999999999999999999999999999999999999964556789999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+|+.+.+.+++.+++++|++.+|.+++.+|+.++.....++++.++.+.......+.++|++||+.+++.+|+.
T Consensus 194 ~~~~~~l~~~~~~~a~~i~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~Egi~AfleKR~p 267 (275)
T d1dcia_ 194 FPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDS 267 (275)
T ss_dssp ESSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCG
T ss_pred eehhhhhhhcccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCC
Confidence 99745678888999999999999999999999999998899999999999988899999999999999987653
|
| >d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: AUH protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-45 Score=322.77 Aligned_cols=220 Identities=26% Similarity=0.421 Sum_probs=199.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.++++.++.|++|++|||+|.| ++||+|.|++.+..... .....+...++.++..+.++||||||
T Consensus 37 ~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~~kpvIa 104 (266)
T d1hzda_ 37 MLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS------------SEVGPFVSKIRAVINDIANLPVPTIA 104 (266)
T ss_dssp HHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH------------HHHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHHhCCCcceEEEeccccccccccccccccccccc------------hhhhhhhhHHHHHHHHHhcCCccccc
Confidence 478899999999999999999998 68999999998864322 12234556778889999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+ .+++++++||++++|+||+++||||+
T Consensus 105 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~ig~-~~a~~l~ltg~~~~a~eA~~~Glv~~ 183 (266)
T d1hzda_ 105 AIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGM-SLAKELIFSARVLDGKEAKAVGLISH 183 (266)
T ss_dssp EESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHTCEEEHHHHHHHTSCSE
T ss_pred ccccccccccceeccccceeeecCCcEEeecccceeecCCccceeeehhhhHH-HHHHhhhccCCccCHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999995 99999999999999999999999999
Q ss_pred ccCChhH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccccC
Q psy14406 160 LYDDKES----LLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDC 234 (275)
Q Consensus 160 vv~~~~~----l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~s 234 (275)
+||+ ++ +.+.+..++++++..||.+++.+|+.++.....++++.++.+...+...+.++|++||+.+++.+|+.
T Consensus 184 vv~~-~~l~~~~~~~a~~~a~~i~~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P 261 (266)
T d1hzda_ 184 VLEQ-NQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPP 261 (266)
T ss_dssp EECC-CTTSCHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCC
T ss_pred ccCh-hhhhhHHHHHHHHHHHhcccCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCC
Confidence 9997 44 55667777788999999999999999999999999999999999988899999999999999987653
|
| >d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.5e-45 Score=318.77 Aligned_cols=221 Identities=24% Similarity=0.343 Sum_probs=199.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|+++++|||+|.|+.||+|+|++.+...... .......+...++.++..+.++||||||+
T Consensus 30 el~~~l~~~~~d~~v~~vvl~g~g~~f~aG~dl~~~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~kpvIaa 100 (253)
T d1uiya_ 30 SLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTEL---------GAEENYRHSLSLMRLFHRVYTYPKPTVAA 100 (253)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTS---------CHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEecccccccccchhHHhhhcccc---------CcccccchhhhhhhhhhHHhcCCCCEEEE
Confidence 578999999999999999999999999999999887643321 11123344556778889999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|. |++++|++++|+ .++++|++||++++++||+++||||++
T Consensus 101 v~G~a~GgG~~lal~~D~ria~~~a~~~~~e~~~g~~~~-~~~~~l~~~~g~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 178 (253)
T d1uiya_ 101 VNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAA-LVSVILVRAVGE-KAAKDLLLTGRLVEAREAKALGLVNRI 178 (253)
T ss_dssp ECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCH-HHHHHHHHHSCH-HHHHHHHHHCCEEEHHHHHHHTSCSEE
T ss_pred eCeEEehhhHHHHhhhhhhhhhhhhHHhhhhcccccccc-cchhhhhcccCH-HHHHHHhhcCcCCCHHHHHHhCCCccc
Confidence 999999999999999999999999999999999998875 567899999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+++ +++.+.+.++++++++.+|.++..+|+.++.....++++.+..+.......+.++|++||+.+++.+|+
T Consensus 179 ~~~-~~~~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~eKR~ 250 (253)
T d1uiya_ 179 APP-GKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRP 250 (253)
T ss_dssp ECT-TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSC
T ss_pred ccc-cccchhHHHHHHhhcccchHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCC
Confidence 998 889999999999999999999999999999999999999999999988888999999999999998764
|
| >d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-44 Score=314.01 Aligned_cols=211 Identities=18% Similarity=0.287 Sum_probs=186.7
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|+.+ +||++|.|++||+|+|++++...... ............+++++.++.++|||+||+
T Consensus 34 ~l~~~l~~~~~d~~v-~vvl~g~g~~F~aG~Dl~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~kpvIa~ 104 (245)
T d2f6qa1 34 EIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPG--------GVEEKAKNNAVLLREFVGCFIDFPKPLIAV 104 (245)
T ss_dssp HHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTT--------HHHHHHHHHHHHHHHHHHHHHSCCSCEEEE
T ss_pred HHHHHHHHHhcCCce-EEeecCCCccccCCccchhhhccccc--------ccccccchhhhHHHHHHhhhhhcCCceEEE
Confidence 478899999999887 89999999999999999998654321 011223445556778899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+ .++++++++|++++|+||+++||||++
T Consensus 105 v~G~a~GgG~~la~~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~g~-~~a~~l~l~g~~~~a~eA~~~Glv~~v 183 (245)
T d2f6qa1 105 VNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSP-AKATEMLIFGKKLTAGEACAQGLVTEV 183 (245)
T ss_dssp ECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCH-HHHHHHHTTCCCEEHHHHHHTTSCSEE
T ss_pred ECCccccccccchhhhhhhhhhccCeEecccccCCCCccccchhhccccccc-chhhhhccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999995 999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHH
Q psy14406 161 YDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCN 222 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 222 (275)
+|+ +++.+++.++++++++.||.+++.+|+.++......+++.+..+...+...+.++|++
T Consensus 184 v~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~ 244 (245)
T d2f6qa1 184 FPD-STFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECT 244 (245)
T ss_dssp ECT-TTHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred CCc-chHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhcCcccC
Confidence 998 8999999999999999999999999999999888788999999888888888887764
|
| >d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Carbapenem biosynthes protein CarB species: Pectobacterium carotovorum [TaxId: 554]
Probab=100.00 E-value=7e-44 Score=305.93 Aligned_cols=196 Identities=23% Similarity=0.341 Sum_probs=175.9
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
+|.+++++++.|+++|+|||+|.| ++||+|+|++++..... ......+...+++++..+.++|||+||
T Consensus 31 ~l~~~l~~~~~d~~i~~vVl~~~g~~~F~aG~Dl~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~kpvIa 99 (230)
T d2a7ka1 31 SVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSR-----------SEDIEEWIDRVIDLYQAVLNVNKPTIA 99 (230)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-C-----------HHHHHHHHHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHhCCcccccceeccchhhhhhhccccccccccc-----------ccccccchhhhhhhhhcccchhcceee
Confidence 478899999999999999999987 89999999999865422 012345566778889999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
+|||+|+|||++|+++|||||++++++|++||+++|++|++|+ ++|++++|+ .+++++++||++++|+||+++||||+
T Consensus 100 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~-~~l~~~iG~-~~a~~l~l~g~~~~a~eA~~~Glv~~ 177 (230)
T d2a7ka1 100 AVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGA-AILGFTHGF-STMQEIIYQCQSLDAPRCVDYRLVNQ 177 (230)
T ss_dssp EECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHH-HHHHHHHCH-HHHHHHHHHCCCBCHHHHHHHTCCSE
T ss_pred ecccccccccccchhccchhhccccchhhhccccccccccccc-ccccccccc-ccccccccccccchHHHHHHhhhccc
Confidence 9999999999999999999999999999999999999998776 579999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDK 210 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~ 210 (275)
++++ +++.+++.++++++++.||.+++.+|+.++......+++.++.+..
T Consensus 178 vv~~-~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~a 227 (230)
T d2a7ka1 178 VVES-SALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKA 227 (230)
T ss_dssp EECH-HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 9997 8999999999999999999999999999999887777777766543
|
| >d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=5.4e-44 Score=310.13 Aligned_cols=211 Identities=20% Similarity=0.231 Sum_probs=189.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVIS 79 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia 79 (275)
||.++++.+++|+++++|||+|.| ++||+|+|++++..... .....+...+++++.++.++|||+||
T Consensus 34 ~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~kpvIa 101 (249)
T d1sg4a1 34 ELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSP------------AHYAGYWKAVQELWLRLYQSNLVLVS 101 (249)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCH------------HHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHHHHHHHHhCCCccEEEEEeccceeEeccccccccccccc------------ccccccchhhHHHHHhhhcCccccch
Confidence 478899999999999999999998 57999999998854221 22345667788899999999999999
Q ss_pred EECchhchHHHHHHHHCCEEEEeCCceE--eccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCc
Q psy14406 80 AVHGACIGGGMSLITAADIRYATKDAWF--TLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157 (275)
Q Consensus 80 ~v~G~a~GgG~~lal~~D~rva~~~a~f--~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv 157 (275)
+|||+|+|||++|+++|||||++++++| ++||+++|++|+.|++++|++++|+ .+++++++||+++++++|+++|||
T Consensus 102 ~v~G~a~GgG~~lal~~D~~ia~~~a~f~~~~pe~~~Gl~p~~g~~~~l~~~iG~-~~a~~lll~g~~~~a~~A~~~Glv 180 (249)
T d1sg4a1 102 AINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGH-RAAERALQLGLLFPPAEALQVGIV 180 (249)
T ss_dssp EECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCH-HHHHHHHHHTCCBCHHHHHHHTSS
T ss_pred hhcccccccccccccccccceeecccccccccccccccccccccccccccccccc-ccccccccccccccHHHHHhhccc
Confidence 9999999999999999999999999876 7899999999999999999999995 899999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhcc
Q psy14406 158 SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGV 225 (275)
Q Consensus 158 ~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~ 225 (275)
|+++|+ +++.+++.++++++++.||.+++.+|+.++......+.+.++.+...+...+.++++++++
T Consensus 181 ~~v~~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~~~e~~~~~l 247 (249)
T d1sg4a1 181 DQVVPE-EQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSL 247 (249)
T ss_dssp SEEECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHH
T ss_pred cccCCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHhc
Confidence 999997 8999999999999999999999999999999877777777877777777677887787765
|
| >d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Fatty oxidation complex alpha subunit, N-terminal domain species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.5e-43 Score=316.48 Aligned_cols=221 Identities=22% Similarity=0.260 Sum_probs=190.2
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++++.++.|+++++|||+|.|++||+|+||+++....... + .........+++++..|.++||||||+
T Consensus 39 el~~al~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~l~~~~kPvIaa 109 (310)
T d1wdka4 39 ELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLP----D-----AELIAGNLEANKIFSDFEDLNVPTVAA 109 (310)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSC----H-----HHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEECCCCCccchhhhhhhhhccccc----c-----hhhhhhhhHHHHHHHHhhcCCccceee
Confidence 4788999999999999999999999999999999986432210 1 112223345678899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~v 160 (275)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+ .++++++++|++++++||+++||||++
T Consensus 110 v~G~a~GgG~elal~cD~ria~~~a~f~~pe~~~Gl~P~~gg~~~L~r~iG~-~~a~~lll~g~~~~a~eA~~~Glv~~v 188 (310)
T d1wdka4 110 INGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGV-DNAVEWIASGKENRAEDALKVSAVDAV 188 (310)
T ss_dssp ECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCH-HHHHHHHHHCCCEEHHHHHHTTSSSEE
T ss_pred ccccccccccccchhhhhhhccccceecccccccCCCccccchhhhhhhhhh-hhhhhhhccccccCHHHHhhccCccEE
Confidence 9999999999999999999999999999999999999999999999999995 899999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHHhcCCHH---------------------------------------HHHHHHHHHHhhhcCCH
Q psy14406 161 YDDKESLLAGAIELGELIASKSPV---------------------------------------AVQGTKKTLVFSRDHAV 201 (275)
Q Consensus 161 v~~~~~l~~~a~~~a~~la~~~~~---------------------------------------a~~~~K~~l~~~~~~~~ 201 (275)
||+ +++.+.+.++++++++.++. +...+...+..+...++
T Consensus 189 v~~-~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pA~~~~l~~v~~~~~~~~ 267 (310)
T d1wdka4 189 VTA-DKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGR 267 (310)
T ss_dssp ECG-GGHHHHHHHHHHHHHTTSSCHHHHHGGGGSCCSCCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCH
T ss_pred ccH-HHHHHHHHHHHHHHHhcccchhhhhhhhcccccccchhhhHHHHHhhhhhhhhccCCChHHHHHHHHHHHHhCCCH
Confidence 997 99999999999999876532 11223345666677789
Q ss_pred HHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 202 EEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++++..|...+.....+++.++++.+|..+|
T Consensus 268 ~~~L~~E~~~f~~l~~t~~a~~~i~aF~~kr 298 (310)
T d1wdka4 268 DKALEVEAAGFAKLAKTSASNCLIGLFLNDQ 298 (310)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Confidence 9999999999998899999999988887655
|
| >d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Methylmalonyl CoA decarboxylase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-44 Score=314.24 Aligned_cols=217 Identities=24% Similarity=0.407 Sum_probs=186.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeC--CCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAA--GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVI 78 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~--G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~I 78 (275)
||.++|++++ ++++++|||+|. |++||+|+||+++.....+. ..+...+++++..+.++|||||
T Consensus 35 ~l~~al~~~~-~~~~~~vVl~g~~g~~~F~aG~Dl~~~~~~~~~~-------------~~~~~~~~~~~~~i~~~~kPvI 100 (261)
T d1ef8a_ 35 DLMQALSDLN-RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDP-------------LSYDDPLRQITRMIQKFPKPII 100 (261)
T ss_dssp HHHHHHHHTC-STTCCEEEEECCTTCSEEECCSCSTTC-----CT-------------TCTTSHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHh-CCCCEEEEEeccccchhhcccccccccccCCccc-------------cccccchhhhHHHHHhCchhhh
Confidence 4788999997 568999999986 48999999999985422110 1123345678889999999999
Q ss_pred EEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCcc
Q psy14406 79 SAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158 (275)
Q Consensus 79 a~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~ 158 (275)
|+|||+|+|||++|+++||+||++++++|++||+++|++|+.|+++++++++|. .++++++++|++++++||+++||||
T Consensus 101 Aav~G~a~GgG~~lal~cD~ria~~~a~~~~pe~~~Gl~~~~~~~~~l~r~~g~-~~a~~~~l~g~~~~a~eA~~~Glv~ 179 (261)
T d1ef8a_ 101 SMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGF-HIVKELIFTASPITAQRALAVGILN 179 (261)
T ss_dssp EEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCH-HHHHHHHHHCCCEEHHHHHHTTSCS
T ss_pred hcccccccchhhhhhhhhhhhhhhHhHHHhhhhcccccccccccccccccccCc-cccccccccCceEcHHHHHHcCCcc
Confidence 999999999999999999999999999999999999999999999999999995 8999999999999999999999999
Q ss_pred cccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCH--HHHHHHHHHHhhcccCCchHHhcccccccccc
Q psy14406 159 KLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAV--EEGLNQVDKESKNGCDRRNCNKGVSPERMSHD 233 (275)
Q Consensus 159 ~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 233 (275)
+++++ +++.+.+.++++++++.+|.+++.+|+.++...+... ...++.+.......+.++|++||+++++.+|+
T Consensus 180 ~vv~~-~~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~D~~Egi~AfleKR~ 255 (261)
T d1ef8a_ 180 HVVEV-EELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRK 255 (261)
T ss_dssp EEECH-HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSC
T ss_pred eeeec-hhhhhhhHHHHHHHHhcCcHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCC
Confidence 99997 8999999999999999999999999999998765443 34455555555566799999999999988764
|
| >d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Naphthoate synthase MenB species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.3e-42 Score=307.10 Aligned_cols=229 Identities=21% Similarity=0.236 Sum_probs=179.4
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCC-------CCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14406 1 EIGECFDSLSENEECRVIILSAAG-------KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERC 73 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G-------~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 73 (275)
||.++|+++++|+++++|||+|.| +.||+|.|++........... .+..............++.++..|.++
T Consensus 51 eL~~~l~~~~~d~~vr~vVltg~~~~f~~gG~~f~ag~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ 129 (297)
T d1q52a_ 51 ELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYAS-GDTADTVDVARAGRLHILEVQRLIRFM 129 (297)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC------------------------------CHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCccEEEEecCCCcccchhhhhhhcchhhhhccccccccc-ccccchhhhHHHHHHHHHHHHHHHHhc
Confidence 578899999999999999999984 567777777765432111000 000011112233344567888999999
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHH
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEAR 152 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~ 152 (275)
||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|+++++++|++++|. ++++++++||++++++||+
T Consensus 130 ~kPvIaav~G~a~GGG~~lal~~D~~ia~~~~~~f~~pe~~~Gl~p~~~~~~~L~r~iG~-~~a~~llltg~~~~a~eA~ 208 (297)
T d1q52a_ 130 PKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQ-KFAREIFFLGRTYTAEQMH 208 (297)
T ss_dssp SSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCGGGGTCCCCSTTTHHHHHHHCH-HHHHHHHHHCCEECHHHHH
T ss_pred CCeEEEEEcceeeeccchhhhhhhccccccccccceeeeeccccccccccccccccccCc-cceeeccccccccchHhhh
Confidence 9999999999999999999999999999876 5799999999999999999999999995 9999999999999999999
Q ss_pred HcCCcccccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHhhcccCCchHHhccccccccc
Q psy14406 153 ECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSH 232 (275)
Q Consensus 153 ~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~ 232 (275)
++||||+++++ +++.+++.++++++++.||.+++.+|+.++...+ .+.+....+.......+.++|++||+.+++.+|
T Consensus 209 ~~Glv~~vv~~-~el~~~~~~~a~~l~~~~~~a~~~~K~~~~~~~~-~~~~~~~~~~~~~~~~~~s~d~~Egv~AF~eKR 286 (297)
T d1q52a_ 209 QMGAVNAVAEH-AELETVGLQWAAEINAKSPQAQRMLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKR 286 (297)
T ss_dssp HHTSCSEEECG-GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTS
T ss_pred hhccccccCch-HHhhHHHHHHhhhhccCCHHHHHHHHHHHHHhhc-ChHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCC
Confidence 99999999997 8999999999999999999999999999987554 555555555555566778999999999998865
Q ss_pred c
Q psy14406 233 D 233 (275)
Q Consensus 233 ~ 233 (275)
+
T Consensus 287 ~ 287 (297)
T d1q52a_ 287 P 287 (297)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-41 Score=298.08 Aligned_cols=209 Identities=20% Similarity=0.275 Sum_probs=170.0
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.++|+++++|++|++|||+|.|++||+|+||+++......... ............++..++.++..+.++||||||+
T Consensus 36 el~~al~~~~~d~~v~~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAa 114 (266)
T d1pjha_ 36 YLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTN-KYPSETSKWVSNFVARNVYVTDAFIKHSKVLICC 114 (266)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC--------CCSSHHHHHHHHTHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHhCCCceEEEEeccccccccchhHHHHHhccccccc-cccchhhHHHHHHHHHHHHHHHHHHhcchhhhhh
Confidence 578999999999999999999999999999999998654321100 0001122345566777888999999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEe-CCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYAT-KDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|++|+ .++++|++||++++++||+++||||+
T Consensus 115 v~G~a~GgG~~lal~~D~~ia~~~~~~~~~pe~~lGl~p~~g~~~~l~r~~g~-~~a~~llltg~~~~a~eA~~~Glv~~ 193 (266)
T d1pjha_ 115 LNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGT-NTTYECLMFNKPFKYDIMCENGFISK 193 (266)
T ss_dssp ECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCH-HHHHHHHHTTCCEEHHHHHHTTCCSE
T ss_pred hhcccccccccchhccchhhhhhcccccccccccccccccccccccccccccc-chhhhhhccCCcCCHHHHHHCCCEeE
Confidence 9999999999999999999997 558899999999999999999999999995 99999999999999999999999999
Q ss_pred ccCChhH-HHH----HHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHH
Q psy14406 160 LYDDKES-LLA----GAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211 (275)
Q Consensus 160 vv~~~~~-l~~----~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~~~~ 211 (275)
+++..+. .+. .+..+++.+...++.++..+|+.++......+......+...
T Consensus 194 v~~~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~K~~l~~~~~~~~~~~~~~e~~~ 250 (266)
T d1pjha_ 194 NFNMPSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVEVNE 250 (266)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred eeCchhhhHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 9975211 111 244567778889999999999999887766666655554443
|
| >d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: 6-oxo camphor hydrolase species: Rhodococcus erythropolis [TaxId: 1833]
Probab=100.00 E-value=4.1e-41 Score=291.86 Aligned_cols=193 Identities=24% Similarity=0.334 Sum_probs=171.6
Q ss_pred CHHHHHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEE
Q psy14406 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISA 80 (275)
Q Consensus 1 el~~~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~ 80 (275)
||.+++++++.|+++++|||+|.|++||+|+|++++..... .....++..++.++..+.++||||||+
T Consensus 44 el~~al~~~~~d~~v~~vvl~g~g~~FsaG~Dl~~~~~~~~------------~~~~~~~~~~~~l~~~i~~~~~pvIa~ 111 (249)
T d1szoa_ 44 ELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTP------------HDWDEIIFEGQRLLNNLLSIEVPVIAA 111 (249)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSH------------HHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHhCCCcceEeeecccccccccchhhhhhcccc------------cchhhhhhhhhhhhhhcccCcccceee
Confidence 47889999999999999999999999999999998753221 123455666788899999999999999
Q ss_pred ECchhchHHHHHHHHCCEEEEeCCceEe-ccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHHHHcCCccc
Q psy14406 81 VHGACIGGGMSLITAADIRYATKDAWFT-LKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159 (275)
Q Consensus 81 v~G~a~GgG~~lal~~D~rva~~~a~f~-~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA~~~GLv~~ 159 (275)
|||+|.| |++|+++||+||++++++|. +||+++|++|+.|++++|++++|+ .++++|++||++++++||+++||||+
T Consensus 112 v~g~~~G-G~~l~l~~D~ria~~~a~f~~~pe~~~g~~p~~g~~~~l~r~ig~-~~a~~l~ltg~~~~a~eA~~~Glv~~ 189 (249)
T d1szoa_ 112 VNGPVTN-APEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGS-NRGRYFLLTGQELDARTALDYGAVNE 189 (249)
T ss_dssp ECSCBCS-STHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCH-HHHHHHHHTTCEEEHHHHHHHTSCSE
T ss_pred ecccccc-ccccccccccccccCCcEEEEeeccccccccccccccccccccCc-cceeeecccCCCCCHHHHHHhCCcCc
Confidence 9998865 67899999999999999985 799999999999999999999995 89999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCHHHHHHHH
Q psy14406 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208 (275)
Q Consensus 160 vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~~ 208 (275)
++|+ +++.+++.++++++++.||.+++.+|+.++......++..++..
T Consensus 190 vv~~-~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~e~~l~~~ 237 (249)
T d1szoa_ 190 VLSE-QELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLG 237 (249)
T ss_dssp EECH-HHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred ccCH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 9997 99999999999999999999999999999987765565555443
|
| >d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.94 E-value=1.5e-05 Score=63.33 Aligned_cols=98 Identities=20% Similarity=0.221 Sum_probs=65.8
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchh---------------hhhhhH
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGA---------------LQRLPR 128 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r 128 (275)
++..+..++.|+...+.|.|.+.|.-+.+++| .|++.++++|-+-....|+.-...- ...+.+
T Consensus 63 i~d~i~~~~~~v~t~~~G~aaS~a~~il~ag~k~~R~~~~~s~~miH~~~~~~~G~~~~i~~~~~~l~~~~~~i~~i~a~ 142 (179)
T d2cbya1 63 IYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAE 142 (179)
T ss_dssp HHHHHHHCSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccceeeehhhhhhhHHHHHHHcCCCCceEECCchHhhcCCCchhcCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677999999999999999999999999 8999999999887765444221110 001222
Q ss_pred HhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 129 IIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 129 ~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
..|. ......++-.-.-++|+||+++||||+|+..
T Consensus 143 ~tg~~~~~i~~~~~~d~~l~a~EA~~~GliDeIi~~ 178 (179)
T d2cbya1 143 FTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITR 178 (179)
T ss_dssp HHCCCHHHHHHHHHTTCEEEHHHHHHHTSCSEECSC
T ss_pred HhCCCHHHHHHhhcCCceecHHHHHHcCCCcEEecC
Confidence 2332 1122334445566999999999999999864
|
| >d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Escherichia coli [TaxId: 562]
Probab=97.93 E-value=7.3e-06 Score=65.37 Aligned_cols=98 Identities=17% Similarity=0.204 Sum_probs=66.5
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchhh---------------hhhhH
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGAL---------------QRLPR 128 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r 128 (275)
++..|..++.|+...+.|.|.+.|.-+.++|| .|++.++++|-+-+...|..-...-. ..+.+
T Consensus 66 i~d~i~~~~~~v~tv~~G~aaS~a~~I~~ag~~~~R~~~~ns~~miH~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~ 145 (183)
T d1yg6a1 66 IYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAL 145 (183)
T ss_dssp HHHHHHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEEEEeHHHHHHHHHcCCCCceeeCCCceEEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777999999999999999999999998 79999999988777665542111100 01122
Q ss_pred HhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 129 IIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 129 ~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
..|. .....+++-.-.-++|+||+++||||+|+..
T Consensus 146 ~tg~~~e~i~~~~~~d~~lta~EAl~~GliD~Ii~~ 181 (183)
T d1yg6a1 146 HTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH 181 (183)
T ss_dssp HHCCCHHHHHHHTSSCEEEEHHHHHHHTSSSEECCC
T ss_pred HHCcCHHHHHHHhccCccccHHHHHHcCCCcEEecc
Confidence 2222 1112223222234799999999999999975
|
| >d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Plasmodium falciparum [TaxId: 5833]
Probab=97.78 E-value=5.4e-05 Score=60.53 Aligned_cols=98 Identities=7% Similarity=0.098 Sum_probs=67.6
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchh---------------hhhhhH
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGA---------------LQRLPR 128 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r 128 (275)
++..+..++.|+...+.|.|.+.|.-++++++ .|++.++++|-+.....|..-...- ...+.+
T Consensus 67 i~d~i~~~~~~v~tv~~G~aaS~a~~i~~aG~kg~R~~~pns~imiH~~s~~~~G~~~di~~~~~~l~~~~~~~~~i~a~ 146 (190)
T d2f6ia1 67 ILDIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSS 146 (190)
T ss_dssp HHHHHHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCceEEEEeccccchhHHHHHhCCCCccccCCCcEEEEcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667999999999999999999999998 6999999999988887665321110 011223
Q ss_pred HhCcH-HHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 129 IIGNQ-SLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 129 ~~G~~-~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
..|.. .....++-.-.-++|+||+++||||+|+.+
T Consensus 147 ~tg~~~~~i~~~~~~d~~l~a~EAl~~GliD~Ii~~ 182 (190)
T d2f6ia1 147 FTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIET 182 (190)
T ss_dssp HHCCCHHHHHHHHHTTCEECHHHHHHHTSCSEECCC
T ss_pred HcCCCHHHHHHhccCCeeecHHHHHHcCCCcEEccc
Confidence 33321 112223333345899999999999999965
|
| >d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.63 E-value=0.00023 Score=56.79 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=65.3
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHH--CCEEEEeCCceEeccccccCcccCchhh-----------------hhh
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITA--ADIRYATKDAWFTLKEVDIGLTADVGAL-----------------QRL 126 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~--~D~rva~~~a~f~~pe~~~G~~p~~g~~-----------------~~l 126 (275)
++..+..++.|+...+.|.|.+.|.-|+++ ++.|++.++++|-+-....|........ ..+
T Consensus 74 i~d~i~~~~~~v~t~~~G~aaS~as~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~ 153 (192)
T d1y7oa1 74 IVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKIL 153 (192)
T ss_dssp HHHHHHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcceEEEeccccCCccceeeeecCCCccccchHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 345566779999999999999999988876 4699999999999888776654321111 001
Q ss_pred hHHhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 127 PRIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 127 ~r~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
....|. .....+.+-.-.-++|+||+++||||+|+.+
T Consensus 154 ~~~tg~~~~~i~~~~~rd~~lsa~EAleyGliD~Ii~~ 191 (192)
T d1y7oa1 154 AENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMAN 191 (192)
T ss_dssp HHHHTCCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCC
T ss_pred HHHhCCCHHHHHHhhcCCceecHHHHHHcCCCcEEecC
Confidence 222222 1122344445566999999999999999864
|
| >d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=97.62 E-value=0.00015 Score=58.09 Aligned_cols=98 Identities=13% Similarity=0.211 Sum_probs=67.2
Q ss_pred HHHHhhcCCCcEEEEECchhchHHHHHHHHCC--EEEEeCCceEeccccccCcccCchhh---------------hhhhH
Q psy14406 66 SISSLERCPKPVISAVHGACIGGGMSLITAAD--IRYATKDAWFTLKEVDIGLTADVGAL---------------QRLPR 128 (275)
Q Consensus 66 ~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D--~rva~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r 128 (275)
++..+..++.|+...+.|.|.+.|.-|.+++| .|++.++|+|-+-....|..-...-. ..+..
T Consensus 76 i~d~i~~~~~~V~tv~~G~aaS~a~~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~di~~~~~el~~~~~~i~~i~a~ 155 (193)
T d1tg6a1 76 IYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAK 155 (193)
T ss_dssp HHHHHHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCceEEEEccchHHHHHHHhhcCccCccccCcccHHHhcCCccCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677899999999999999999999999 59999999998888776653211100 00112
Q ss_pred HhCc-HHHHHHHHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 129 IIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 129 ~~G~-~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
..|. ......++-.-.-++|+||+++||||+|+..
T Consensus 156 ~Tg~~~~~i~~~~~rD~~lta~EAl~yGliD~Ii~~ 191 (193)
T d1tg6a1 156 HTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVH 191 (193)
T ss_dssp HHCCCHHHHHHHHSSCEEECHHHHHHHTSCSEECSS
T ss_pred HcCCCHHHHHHHhccCccCCHHHHHHcCCCCEEccC
Confidence 2221 1111223322334999999999999999864
|
| >d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=0.00021 Score=61.29 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHH
Q psy14406 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNE 138 (275)
Q Consensus 59 ~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~ 138 (275)
..+...+++..+..+..|+|+.|-|-+.|||......+|.+++-++|+++. +.|.+.+ ..|-+--- .+.+
T Consensus 174 ~~~~~a~~~~~~~~~~vP~i~vv~g~g~~gga~a~~~~d~v~m~~~a~~sv------ispEg~A-sILwkd~~---~a~e 243 (316)
T d2f9ya1 174 QSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCA-SILWKSAD---KAPL 243 (316)
T ss_dssp HHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHH-HHHSSCST---THHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEhhhhchhhhhhhhhhHHHHHhhhHHhh------ccchhhh-hHhhccch---hhcc
Confidence 345566778899999999999999999999999999999999999999982 2344433 34433222 2222
Q ss_pred HHhcCCCCCHHHHHHcCCcccccCC
Q psy14406 139 IAFTARKIEAAEARECGLVSKLYDD 163 (275)
Q Consensus 139 l~ltG~~~~a~eA~~~GLv~~vv~~ 163 (275)
.-....+++.+.++.|+||+|++.
T Consensus 244 -aAealklta~dL~~lgiIDeII~E 267 (316)
T d2f9ya1 244 -AAEAMGIIRPRLKELKLIDSIIPE 267 (316)
T ss_dssp -HHHHHTCSHHHHHTTTSCSCCCCC
T ss_pred -hHHHHhhhhHHHHHcCchhhcccC
Confidence 222356899999999999999964
|
| >d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) species: Propionibacterium freudenreichii [TaxId: 1744]
Probab=97.33 E-value=0.00094 Score=55.45 Aligned_cols=80 Identities=23% Similarity=0.297 Sum_probs=55.7
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHH---
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAE--- 150 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~e--- 150 (275)
..|+|+++.|+|.||+......||++|+++++.+++.-. ..+. ..+|+.++.+|
T Consensus 161 ~vP~i~vv~Gp~~GG~a~~~~~~d~vi~~~~a~i~~aGP-----------~vVe------------~~~ge~~~~eelGg 217 (253)
T d1on3a1 161 VVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFITGP-----------QVIK------------SVTGEDVTADELGG 217 (253)
T ss_dssp TSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESSCH-----------HHHH------------HHHCCCCCHHHHHS
T ss_pred cceEEEEEecCcccceeeccchhhheeccccceEEecCc-----------chhh------------hhhCCcCChHhccC
Confidence 489999999999999999999999999999887653211 0111 11355565443
Q ss_pred ----HHHcCCcccccCChhHHHHHHHHHHHHHhc
Q psy14406 151 ----ARECGLVSKLYDDKESLLAGAIELGELIAS 180 (275)
Q Consensus 151 ----A~~~GLv~~vv~~~~~l~~~a~~~a~~la~ 180 (275)
+...|.+|.++++ + +.+.++++++.+
T Consensus 218 a~~h~~~sG~iD~v~~~-e---~~a~~~~r~lls 247 (253)
T d1on3a1 218 AEAHMAISGNIHFVAED-D---DAAELIAKKLLS 247 (253)
T ss_dssp HHHHHHTTCCCSEEESS-H---HHHHHHHHHHHH
T ss_pred HHHhhhccccceEEECC-H---HHHHHHHHHHHH
Confidence 3467999999998 3 345555555443
|
| >d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.23 E-value=0.002 Score=53.59 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=56.0
Q ss_pred CCCcEEEEECchhchHHHHHHHHCCEEEEeC-CceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHHH
Q psy14406 73 CPKPVISAVHGACIGGGMSLITAADIRYATK-DAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEA 151 (275)
Q Consensus 73 ~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~-~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~eA 151 (275)
-..|+|+++.|+|.||+......||++|+.+ ++.+++.-. +.+ =..+|+.++.+|+
T Consensus 159 ~~vP~I~vv~G~~~gG~a~~~~~~~~vim~~~~a~i~~aGP---------------~vv--------~~~~ge~i~~eel 215 (258)
T d1xnya1 159 GVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFITGP---------------DVI--------KTVTGEDVGFEEL 215 (258)
T ss_dssp TTSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESSCH---------------HHH--------HHHHCCCCCHHHH
T ss_pred CCCCEEEEEcCCcChhHHHHHHhccchhhcccceEEEecCH---------------HHH--------HHHhcCccChHHh
Confidence 3599999999999999999999999988876 455542211 111 1235677777764
Q ss_pred -------HHcCCcccccCChhHHHHHHHHHHHH
Q psy14406 152 -------RECGLVSKLYDDKESLLAGAIELGEL 177 (275)
Q Consensus 152 -------~~~GLv~~vv~~~~~l~~~a~~~a~~ 177 (275)
...|++|.++++.++..+.+.++..-
T Consensus 216 gga~~h~~~sG~~d~v~~de~ea~~~~r~~Ls~ 248 (258)
T d1xnya1 216 GGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSY 248 (258)
T ss_dssp HBHHHHHHTSSCCSEEESSHHHHHHHHHHHHHH
T ss_pred ccHHHHHhcCCeeEEEeCCHHHHHHHHHHHHHh
Confidence 45799999998744444444444443
|
| >d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD species: Escherichia coli [TaxId: 562]
Probab=97.09 E-value=0.00076 Score=56.35 Aligned_cols=95 Identities=11% Similarity=0.143 Sum_probs=57.9
Q ss_pred HHHhhcCCCcEEEEECchhchHHHH-HHHHCCEEEEeCCceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCC
Q psy14406 67 ISSLERCPKPVISAVHGACIGGGMS-LITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARK 145 (275)
Q Consensus 67 ~~~l~~~~kP~Ia~v~G~a~GgG~~-lal~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~ 145 (275)
...+.....|+|+++.|+|.||+.. +++.+|++++.+++.+++...+ ......|. ++ .-+-
T Consensus 162 ~~~~~~~~vP~I~v~~g~~~GG~aa~~~~~~d~i~~~~~s~i~~aGP~-----------vve~~~ge-----~~--~e~~ 223 (263)
T d2f9yb1 162 LAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVRE-----KL--PPGF 223 (263)
T ss_dssp HHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHH-----------HHHHHHTS-----CC--CTTT
T ss_pred HHHHHhCCCceEEEecCCcchHHHhhhhhcCceEeeecceeeeccCHH-----------HHhhhcCC-----cC--Chhh
Confidence 3344556789999999999999874 7777888888888866542111 11111110 00 1122
Q ss_pred CCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhc
Q psy14406 146 IEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180 (275)
Q Consensus 146 ~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~ 180 (275)
-+++-..+.|+||.++++ ++..+...++.+.|..
T Consensus 224 g~a~~~~~~G~iD~vv~~-ee~~~~l~~~l~~L~~ 257 (263)
T d2f9yb1 224 QRSEFLIEKGAIDMIVRR-PEMRLKLASILAKLMN 257 (263)
T ss_dssp TBHHHHGGGTCCSEECCH-HHHHHHHHHHHHHHTT
T ss_pred ccHHHHHhCCCCCEEECC-HHHHHHHHHHHHHHhh
Confidence 234445678999999986 6655555455555543
|
| >d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Thermotoga maritima [TaxId: 2336]
Probab=97.08 E-value=0.00058 Score=56.72 Aligned_cols=82 Identities=24% Similarity=0.362 Sum_probs=56.8
Q ss_pred cCCCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHH
Q psy14406 72 RCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAE 150 (275)
Q Consensus 72 ~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~e 150 (275)
.-..|+|+++.|+|.||+......||++|+.++ +.+. +.+ |+.+ -..+|+.++.++
T Consensus 156 s~~iP~I~vv~G~~~gG~a~~~~~~d~~im~~~~a~i~-------~aG--------p~vv--------~~~~ge~~~~ee 212 (251)
T d1vrga1 156 SGVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMF-------ITG--------PNVI--------KAVTGEEISQED 212 (251)
T ss_dssp TTTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCB-------SSC--------HHHH--------HHHHCCCCCHHH
T ss_pred CCCCCEEEEEccCccccceehhhhCceEEEEccceeEE-------ecC--------chhh--------hhhcCCcCChHH
Confidence 347999999999999999999999999998765 4322 211 1111 113677888776
Q ss_pred H-------HHcCCcccccCChhHHHHHHHHHHHHHhc
Q psy14406 151 A-------RECGLVSKLYDDKESLLAGAIELGELIAS 180 (275)
Q Consensus 151 A-------~~~GLv~~vv~~~~~l~~~a~~~a~~la~ 180 (275)
. ...|++|.++++. +++.+.++++.+
T Consensus 213 lGga~~h~~~sG~~D~v~~de----~~a~~~ir~lLs 245 (251)
T d1vrga1 213 LGGAMVHNQKSGNAHFLADND----EKAMSLVRTLLS 245 (251)
T ss_dssp HHBHHHHHHTSCCCSEEESSH----HHHHHHHHHHHT
T ss_pred ccchhhhhhccccceEEECCH----HHHHHHHHHHHH
Confidence 4 4679999999873 344455555443
|
| >d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Glutaconyl-CoA decarboxylase A subunit species: Acidaminococcus fermentans [TaxId: 905]
Probab=97.04 E-value=0.0011 Score=55.96 Aligned_cols=104 Identities=16% Similarity=0.170 Sum_probs=60.9
Q ss_pred HhhcCCCcEEEEECchhchHHHHHHHHCCEEEEeCCceEeccccc--cCcccCchhhhhhhHHhCcHHHHHHHHhcCCCC
Q psy14406 69 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVD--IGLTADVGALQRLPRIIGNQSLVNEIAFTARKI 146 (275)
Q Consensus 69 ~l~~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~~pe~~--~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~ 146 (275)
.+.....|+|++|-|.|.|||...+++||++++.+++.+.+.... -+..+..+........+.. . ..--.+-+.+
T Consensus 175 ~ls~~~VP~Isvv~G~~~gGgAy~~~~~~~i~~~~~a~i~~~Gp~vv~~~~~~~~~~~~~~~ei~~-~--~ge~~~~eeL 251 (287)
T d1pixa2 175 ELNQLGIPVIVGIYGTNPAGGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIAD-M--VDRTGKTEPP 251 (287)
T ss_dssp HHHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHH-H--HHTTCCCCCS
T ss_pred HHhhcCCCeEEEecCCccccceeccccceeEEecCCeEEEEECHHHhcccchhhhhhhhhHHHHHh-h--hccccccccc
Confidence 455567999999999999999988888888888898876653322 2222222221111111110 0 0001234555
Q ss_pred CHHHH--HHcCCcccccCChhHHHHHHHHHHHHHh
Q psy14406 147 EAAEA--RECGLVSKLYDDKESLLAGAIELGELIA 179 (275)
Q Consensus 147 ~a~eA--~~~GLv~~vv~~~~~l~~~a~~~a~~la 179 (275)
.+.+. ...|.+|.++++. +++.+.++++.
T Consensus 252 GGa~~H~~~sG~~d~v~~~e----~~ai~~~r~~l 282 (287)
T d1pixa2 252 GAVDIHYTETGFMREVYASE----EGVLEGIKKYV 282 (287)
T ss_dssp SBHHHHTTTSCCSCEEESSH----HHHHHHHHHHH
T ss_pred ccHHHhhhhcccceeecCCH----HHHHHHHHHHH
Confidence 55554 4569999999873 34444444443
|
| >d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.02 E-value=0.0021 Score=53.45 Aligned_cols=83 Identities=18% Similarity=0.218 Sum_probs=56.3
Q ss_pred cCCCcEEEEECchhchHHHHHHHHCCEEEEeCC-ceEeccccccCcccCchhhhhhhHHhCcHHHHHHHHhcCCCCCHHH
Q psy14406 72 RCPKPVISAVHGACIGGGMSLITAADIRYATKD-AWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAE 150 (275)
Q Consensus 72 ~~~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~G~~~~a~~l~ltG~~~~a~e 150 (275)
....|+|+++.|+|.||+......||++|+.++ +++. +. || ... + ..+|+.++.+|
T Consensus 159 ~~~vP~I~~v~G~~~gG~a~~~~~~d~~vm~~~~a~i~-------~a-------------GP-~vV-~-~~~ge~~~~ee 215 (258)
T d2a7sa1 159 SGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMF-------IT-------------GP-DVI-K-TVTGEEVTMEE 215 (258)
T ss_dssp TTTSCEEEEECSCCBSGGGHHHHHSSEEEEEBTTBBCB-------SS-------------CH-HHH-H-HHHCCCCCHHH
T ss_pred cCCCCEEEEEecCcccHHHHHHHhccceEeecCceEEE-------cc-------------Ch-hHH-H-HhcCCccChhh
Confidence 346999999999999999999999999988654 5433 21 11 111 1 12667777664
Q ss_pred -------HHHcCCcccccCChhHHHHHHHHHHHH
Q psy14406 151 -------ARECGLVSKLYDDKESLLAGAIELGEL 177 (275)
Q Consensus 151 -------A~~~GLv~~vv~~~~~l~~~a~~~a~~ 177 (275)
+.+.|.+|.++++.++..+.+.++...
T Consensus 216 LGga~~h~~~sG~~D~v~~de~~a~~~~r~~Ls~ 249 (258)
T d2a7sa1 216 LGGAHTHMAKSGTAHYAASGEQDAFDYVRELLSY 249 (258)
T ss_dssp HHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHH
T ss_pred ccCHhHhhhhccccceEeCCHHHHHHHHHHHHHh
Confidence 356799999998744444444444443
|
| >d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.35 E-value=0.0012 Score=56.67 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=32.7
Q ss_pred CCcEEEEECchhchHHHHHHHHCCEEEEeCCceEe
Q psy14406 74 PKPVISAVHGACIGGGMSLITAADIRYATKDAWFT 108 (275)
Q Consensus 74 ~kP~Ia~v~G~a~GgG~~lal~~D~rva~~~a~f~ 108 (275)
..|+|++|.|.|+|+|..++..||++|+.+++.+.
T Consensus 240 ~iptis~v~G~~vG~gAyl~~L~d~vIm~~~s~i~ 274 (333)
T d1uyra1 240 DIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPII 274 (333)
T ss_dssp HSCEEEEESSCEETHHHHHHHHTCCEEEETTCCEE
T ss_pred CCCEEEEEeCCccccceeecccccEEEEeCCceEE
Confidence 69999999999999999999999999999997654
|
| >d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Thermotoga maritima [TaxId: 2336]
Probab=94.91 E-value=0.094 Score=43.12 Aligned_cols=111 Identities=17% Similarity=0.165 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhhHH-h--
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI-I-- 130 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~-- 130 (275)
..++...+++..+..+..|.|+.|=|.+.|+|..-.. .+|++++.+++.++ +..+-++...+-+. +
T Consensus 124 g~~~~ga~~~~a~a~~~vP~i~viir~~yG~g~~am~~~~~~~d~~~awP~a~~~-------vm~pe~aa~v~~~~~l~~ 196 (264)
T d1vrga2 124 GIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEA 196 (264)
T ss_dssp THHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCCcccHHhhhccCCccCCCeeeeccceeEE-------ecCHHHhhhhhhhhhhhh
Confidence 3456667889999999999999999999998773332 48888888777666 33333333222221 0
Q ss_pred -Cc-HHHHHHH--HhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHH
Q psy14406 131 -GN-QSLVNEI--AFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176 (275)
Q Consensus 131 -G~-~~~a~~l--~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~ 176 (275)
.. ......+ .+.-+.-++-.+.+.|++|.|+++ .+.........+
T Consensus 197 ~~~~~~~~~~~~~~~~e~~~~~~~aa~~g~iD~VIdP-~dTR~~L~~~Le 245 (264)
T d1vrga2 197 SSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVIDP-RETRKYIMRALE 245 (264)
T ss_dssp SSCHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEECCG-GGHHHHHHHHHH
T ss_pred hhCcHHHHHHHHHHHHHHhcCHHHHHHcCCCCeeECH-HHHHHHHHHHHH
Confidence 00 0000011 011122367788899999999987 666665444443
|
| >d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.79 E-value=0.057 Score=44.66 Aligned_cols=110 Identities=15% Similarity=0.152 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhhH-HhCc
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLPR-IIGN 132 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~G~ 132 (275)
..++..-+++.++..+..|.|+.|-|.+.|||..... .+|++++.+++.++. .++-++...+-+ .+..
T Consensus 127 g~~~~ga~~~~a~a~~~vP~isvi~~~~~G~~~~am~~~~~~~d~~~AwP~A~igv-------Mgpegaa~v~~~~~l~~ 199 (271)
T d2a7sa2 127 GIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAV-------MGASGAVGFVYRQQLAE 199 (271)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTTTTTTG
T ss_pred hHHHHHHHHHHHHHhCCCCeEEEEeCCccchhhhhhcccccccceEEEecceeEee-------cCHHHHHHHHHHHhhhh
Confidence 3456677889999999999999999999998754332 468888888887664 333322222221 1110
Q ss_pred H----------HHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHH
Q psy14406 133 Q----------SLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELG 175 (275)
Q Consensus 133 ~----------~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a 175 (275)
. ......-..-..-++-.+.+.|++|.|+++ .+..+......
T Consensus 200 ~~~~~~~~~~~~~~~~~e~~e~~~~p~~aa~~g~iD~VIdP-~dTR~~L~~~L 251 (271)
T d2a7sa2 200 AAANGEDIDKLRLRLQQEYEDTLVNPYVAAERGYVDAVIPP-SHTRGYIGTAL 251 (271)
T ss_dssp GGTSSCCTTSSTTHHHHHHHTTTSBSHHHHHHTSSSEECCG-GGHHHHHHHHH
T ss_pred hhhcccchHHHHHHHHHHHHHHhcCHHHHHHcCCCCeeECH-HHHHHHHHHHH
Confidence 0 000011112233456778889999999987 66655544333
|
| >d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Streptomyces coelicolor [TaxId: 1902]
Probab=94.42 E-value=0.092 Score=43.16 Aligned_cols=111 Identities=19% Similarity=0.214 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhhHHhC-c
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIG-N 132 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~~G-~ 132 (275)
..++...+++.++..+..|.|+.|-|.+.|||..... ..|++++.+++.++. .++-++...+-+.-. .
T Consensus 122 g~~~~ga~~~~a~a~~~vPkitvi~~~~~Gga~~~m~~~~~~~d~~~awP~a~~gv-------m~pe~aa~il~~~~~~~ 194 (263)
T d1xnya2 122 GIIRRGAKLIFAYAEATVPLITVITRKAFGGAYDVMGSKHLGADLNLAWPTAQIAV-------MGAQGAVNILHRRTIAD 194 (263)
T ss_dssp THHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTHHHHHS
T ss_pred hHHHHHHHHHHHHHccCCCeEEEEecCccccceeccCCcccCCcEEEEcchhhhhc-------cCHHHHHHHHHHHHHhh
Confidence 3456677889999999999999999999998775533 368888888877663 333333332222110 0
Q ss_pred ---------HHHHHHHHhcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHH
Q psy14406 133 ---------QSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178 (275)
Q Consensus 133 ---------~~~a~~l~ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~l 178 (275)
.....+. .-...++-.+...|++|.|+++ .+.........+.+
T Consensus 195 a~~~~~~~~~~~~~~~--~~~~~~p~~aA~~g~iD~VIdP-~dTR~~L~~~L~~l 246 (263)
T d1xnya2 195 AGDDAEATRARLIQEY--EDALLNPYTAAERGYVDAVIMP-SDTRRHIVRGLRQL 246 (263)
T ss_dssp CCTTCSSSHHHHHHHH--HHHHSSSHHHHHHTSSSEECCG-GGHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHH--HHHhcCHHHHHHcccCCcccCH-HHHHHHHHHHHHHH
Confidence 0000011 0112346678889999999987 67766555444444
|
| >d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) species: Propionibacterium freudenreichii [TaxId: 1744]
Probab=93.97 E-value=0.058 Score=44.44 Aligned_cols=112 Identities=20% Similarity=0.174 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHH----HCCEEEEeCCceEeccccccCcccCchhhhhhhHH-hC-
Q psy14406 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLIT----AADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI-IG- 131 (275)
Q Consensus 58 ~~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal----~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~G- 131 (275)
..++..-+++.++..+..|.|+.|=|.+.|+|..-.. ..|++++.+++.++ ..++-|+...+-+. +.
T Consensus 124 g~i~~ga~~~~a~a~~~vP~itvi~rkayG~g~~am~g~~~~~d~~~aWP~A~~~-------vMg~Egaa~v~~~~el~a 196 (264)
T d1on3a2 124 GIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKA 196 (264)
T ss_dssp THHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeccccCccccccccccCChhheeeHHhhHhh-------hccHHHHHHHHHhhhhhh
Confidence 4566777889999999999999999999998764443 35677776666555 44444443333221 10
Q ss_pred --c-HHHHHHHH--hcCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHH
Q psy14406 132 --N-QSLVNEIA--FTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177 (275)
Q Consensus 132 --~-~~~a~~l~--ltG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~ 177 (275)
. ...-.+.+ ..-+.-++-.+.+.|++|.|+++ .+.........+.
T Consensus 197 ~~~~~~~~~~~~~e~~~~~~~p~~aA~~g~iD~VIdP-~eTR~~L~~aLe~ 246 (264)
T d1on3a2 197 ADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDP-ADTRRKIASALEM 246 (264)
T ss_dssp SSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCG-GGHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHhcCHHHHHHcCCCCeeECH-HHHHHHHHHHHHH
Confidence 0 00000111 11122356778889999999987 6665554444443
|
| >d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Glutaconyl-CoA decarboxylase A subunit species: Acidaminococcus fermentans [TaxId: 905]
Probab=92.21 E-value=0.58 Score=38.86 Aligned_cols=114 Identities=15% Similarity=0.121 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhhcCCCcEEEEECchhchHHHHHHHH----CCEE--EEeCCceEeccccccCcccCchhhhhh-hHHhC
Q psy14406 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITA----ADIR--YATKDAWFTLKEVDIGLTADVGALQRL-PRIIG 131 (275)
Q Consensus 59 ~~~~~~~~~~~l~~~~kP~Ia~v~G~a~GgG~~lal~----~D~r--va~~~a~f~~pe~~~G~~p~~g~~~~l-~r~~G 131 (275)
.++..-+++.++..+..|.|+.|=|.+.|||...+.. .|++ ++..++ .+|+.++-++...+ .+.+.
T Consensus 141 ~~r~ga~~~~a~~~~~VP~isvi~r~~~G~a~~am~g~~~~~~~~~~~awP~a-------eigvMg~E~aa~vl~~~el~ 213 (299)
T d1pixa3 141 LLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAAT-------EIAVMNGETAATAMYSRRLA 213 (299)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEECSEEETTHHHHTTCTTCTTTEEEEEECTTC-------EEESSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcceeEEEEecccccccccccccCccCcccceecCCCcc-------ccccccchhhheeehhhhhh
Confidence 4566677889999999999999999999988654332 2332 334444 45555444433332 22221
Q ss_pred cH-----------HHHHHHHh-cCCCCCHHHHHHcCCcccccCChhHHHHHHHHHHHHHhc
Q psy14406 132 NQ-----------SLVNEIAF-TARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180 (275)
Q Consensus 132 ~~-----------~~a~~l~l-tG~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~ 180 (275)
.. ..-.++.- .-+..++-.+.+.|++|.|+++ .+.........+.+.+
T Consensus 214 ~~~~~~~~~~e~~e~~~~~~~~~~~~~sp~~aAs~~~iD~IIDP-~dTR~~L~~~Le~~~~ 273 (299)
T d1pixa3 214 KDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVDM-NKIRGYVEAFTEAAYQ 273 (299)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHHTTSHHHHHHHTSSSEECCT-TTHHHHHHHHHHHHTT
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHhcCHHHHHHhCCcCeeECH-HHHHHHHHHHHHHHHh
Confidence 00 00011110 1123577788899999999987 6676666555554443
|
| >d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.40 E-value=1 Score=38.71 Aligned_cols=94 Identities=16% Similarity=0.244 Sum_probs=52.3
Q ss_pred HHHHhhhCCCceEEEEeeCCCCcccCCCcchhhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE--C
Q psy14406 5 CFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAV--H 82 (275)
Q Consensus 5 ~l~~~~~d~~v~~vVl~g~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kP~Ia~v--~ 82 (275)
.+..+.+..++-+|+|.-. +.|+.|-+-.. ...++..-.++..+..+..|+|..| .
T Consensus 121 ~i~d~cd~~~lPLi~l~D~-pGF~~G~~~E~---------------------~gilr~GA~iv~A~~~~~vP~i~vI~~~ 178 (404)
T d1uyra2 121 AINDFNNGEQLPMMILANW-RGFSGGQRDMF---------------------NEVLKYGSFIVDALVDYKQPIIIYIPPT 178 (404)
T ss_dssp HHHHHHTTSCCCEEECCCC-CCBCC---------------------------CTHHHHHHHHHHHHHTCCSCEEEEECTT
T ss_pred HHHHhhhccccceEEeecC-CcccCcHHHHH---------------------HHHHHHHHHHHHHHHhcCCCEEEEEeCC
Confidence 3444544456666666543 56777743221 1234455677889999999999999 6
Q ss_pred chhchHHHHHHH---HCCEEEEeCCceEeccccccCcccCchhhhh
Q psy14406 83 GACIGGGMSLIT---AADIRYATKDAWFTLKEVDIGLTADVGALQR 125 (275)
Q Consensus 83 G~a~GgG~~lal---~~D~rva~~~a~f~~pe~~~G~~p~~g~~~~ 125 (275)
|...||.+.+.- ..+.. ..|+.|...+|+.++-|+...
T Consensus 179 g~~~GGa~vv~~~~~~~~~~-----~~yAwP~a~~gVm~pEGav~I 219 (404)
T d1uyra2 179 GELRGGSWVVVDPTINADQM-----EMYADVNARAGVLEPQGMVGI 219 (404)
T ss_dssp CEEEHHHHHTTCGGGGTTTE-----EEEEETTCEEESSCHHHHHHH
T ss_pred cccchhhhhcccCccCCccc-----eEEECCccccccCChhhhhhh
Confidence 777775544332 11211 134555556666666666433
|