Psyllid ID: psy14466


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-
MVSNLSNVTSKALTKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNII
ccccccccccccccHHHHHHHHHHccccccccEEEEEccEEEEEcccccccccEEEEEEEcccHHHHHHHHHcccccccHHHHHcHHHHHHHHHHHcccEEEcccEEccccccEEEEEEEEHHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHc
ccccccccccHHccHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEEEccHHHHHHHHHHHcccHHHHHHHHcHHHHHHHHHHccccEEEccEEEEccccEEEEEEEEEHHHHHHHHHcHcHEEHHccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccEEEEcccHHHHHHHHcccHHHHHHHHHHHHHHHc
mvsnlsnvtskaltkhDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNdsekfhsenlirnnnhysflkyfgpgvlKKVQEnygskmyfnthipmddlnvtlkygiINRQHFLSDLLDWQHLYVagrlhkpvftfhklTNYELSAAIHLNLTSAVHAALLLLpehfseydLLSTITNlsysgdfrmtfgenkNKIDNIVQGQLEQFRLLYspildnii
mvsnlsnvtskaltKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQleqfrllyspildnii
MVSNLSNVTSKALTKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNII
***********ALTKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILD***
******************FQIILNQFPTEYVVHAFGYGSGVFQ********SMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNII
**********KALTKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNII
****LSNVTSKALTKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNII
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVSNLSNVTSKALTKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNII
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query231 2.2.26 [Sep-21-2011]
Q8INF2 342 Mitochondrial translocato yes N/A 0.926 0.625 0.448 1e-52
Q3B7H2 338 Mitochondrial translocato yes N/A 0.909 0.621 0.462 4e-51
Q32L81 335 Mitochondrial translocato yes N/A 0.883 0.608 0.492 8e-49
Q6DJM2 338 Mitochondrial translocato N/A N/A 0.891 0.609 0.457 3e-47
Q96BW9316 Mitochondrial translocato yes N/A 0.891 0.651 0.469 2e-46
Q3TUH1 337 Mitochondrial translocato yes N/A 0.878 0.602 0.466 2e-45
Q9N4G7 321 Mitochondrial translocato yes N/A 0.909 0.654 0.399 8e-43
Q61X59 321 Mitochondrial translocato N/A N/A 0.909 0.654 0.408 6e-42
O74339 393 Mitochondrial translocato yes N/A 0.796 0.468 0.440 5e-40
Q550P4 427 Mitochondrial translocato yes N/A 0.878 0.475 0.381 1e-34
>sp|Q8INF2|TAM41_DROME Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Drosophila melanogaster GN=CG33331 PE=2 SV=1 Back     alignment and function desciption
 Score =  206 bits (524), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 101/225 (44%), Positives = 139/225 (61%), Gaps = 11/225 (4%)

Query: 17  DFFQIILNQFPTEYVVHAFGYGSGVFQQAN----------KSSIKSMVDIILVVNDSEKF 66
           D ++  + +FP   V + F YGSGV QQ            +    ++VD++  V D+  F
Sbjct: 3   DLYRRTVARFPLGSVSYMFAYGSGVKQQEGYGKVGNGNNLRPPPGTVVDLVFCVRDARGF 62

Query: 67  HSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFL 126
           H+ENL R+ +HYS L++ GP  + K QE  G+ +Y NT +P+ D+ +T+KYG+++++  L
Sbjct: 63  HAENLHRHPDHYSALRHLGPNFVAKYQERLGAGVYCNTLVPLPDVGITIKYGVVSQEELL 122

Query: 127 SDLLDWQHLYVAGRLHKPVFTF-HKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLL 185
            DLLDW+HLY+AGRLHKPV    +   N  L AA+  NL SA+  ALLLLPE F+ Y L 
Sbjct: 123 EDLLDWRHLYLAGRLHKPVTNLVNPSDNPPLKAALERNLVSALQVALLLLPEKFTAYGLF 182

Query: 186 STITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNI 230
            TI  LSY GDFRM FGENK K+ NIV  Q+  F  LY P L  +
Sbjct: 183 HTIAGLSYKGDFRMIFGENKQKVHNIVSPQINDFFALYQPSLGQL 227




May be involved in the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
Drosophila melanogaster (taxid: 7227)
>sp|Q3B7H2|TAM41_DANRE Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Danio rerio GN=tamm41 PE=2 SV=1 Back     alignment and function description
>sp|Q32L81|TAM41_BOVIN Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Bos taurus GN=TAMM41 PE=2 SV=1 Back     alignment and function description
>sp|Q6DJM2|TAM41_XENLA Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Xenopus laevis GN=tamm41 PE=2 SV=1 Back     alignment and function description
>sp|Q96BW9|TAM41_HUMAN Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Homo sapiens GN=TAMM41 PE=2 SV=1 Back     alignment and function description
>sp|Q3TUH1|TAM41_MOUSE Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Mus musculus GN=Tamm41 PE=1 SV=2 Back     alignment and function description
>sp|Q9N4G7|TAM41_CAEEL Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Caenorhabditis elegans GN=Y71F9B.2 PE=3 SV=2 Back     alignment and function description
>sp|Q61X59|TAM41_CAEBR Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Caenorhabditis briggsae GN=CBG04116 PE=3 SV=1 Back     alignment and function description
>sp|O74339|TAM41_SCHPO Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tam41 PE=1 SV=3 Back     alignment and function description
>sp|Q550P4|TAM41_DICDI Mitochondrial translocator assembly and maintenance protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0277049 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
193709388316 PREDICTED: MMP37-like protein, mitochond 0.878 0.642 0.531 3e-55
91083107 339 PREDICTED: similar to MMP37-like protein 0.952 0.648 0.475 2e-54
270008311 336 hypothetical protein TcasGA2_TC030621, p 0.952 0.654 0.475 3e-54
332376499 348 unknown [Dendroctonus ponderosae] 0.896 0.594 0.5 1e-52
118783673 335 AGAP004242-PA [Anopheles gambiae str. PE 0.939 0.647 0.468 2e-52
195037617 338 GH18336 [Drosophila grimshawi] gi|193894 0.926 0.633 0.461 6e-52
170039638 336 mitochondrial import protein MMP37 [Cule 0.917 0.630 0.481 1e-51
195108839 338 GI23316 [Drosophila mojavensis] gi|19391 0.926 0.633 0.452 1e-51
195395278 338 GJ10320 [Drosophila virilis] gi|19414297 0.926 0.633 0.457 2e-51
41058199 342 RE04953p [Drosophila melanogaster] 0.926 0.625 0.453 2e-51
>gi|193709388|ref|XP_001950841.1| PREDICTED: MMP37-like protein, mitochondrial-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/209 (53%), Positives = 145/209 (69%), Gaps = 6/209 (2%)

Query: 22  ILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFL 81
           IL +FPT+++V+ F YGSGVFQQA ++  ++MVD+I VVN++  FH ENL  N +HYS +
Sbjct: 8   ILTKFPTKHLVYCFAYGSGVFQQAGRTD-RAMVDLIFVVNNTHDFHQENLTINPDHYSSI 66

Query: 82  KYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRL 141
           +Y G  VL  VQ ++G+ +YFNTHI +D  N+  KYGII+ + F  DL  W  LY+AGRL
Sbjct: 67  RYLGASVLSSVQTSFGANVYFNTHITVD--NLMFKYGIIDVKDFRQDLQSWYTLYIAGRL 124

Query: 142 HKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNLSYSGDFRMTF 201
            KPV     L +  LS  +  NL SAVHAALL LPE FSE DL   I  LSY GDFRM  
Sbjct: 125 QKPVLV---LRDEGLSDLVMHNLRSAVHAALLQLPEKFSEIDLYIAIAGLSYRGDFRMII 181

Query: 202 GENKNKIDNIVQGQLEQFRLLYSPILDNI 230
           GE+KNK+ NIVQ Q+E+FR LY+P+  ++
Sbjct: 182 GEDKNKVANIVQPQIEKFRTLYTPVFKSM 210




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91083107|ref|XP_969706.1| PREDICTED: similar to MMP37-like protein, mitochondrial [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270008311|gb|EFA04759.1| hypothetical protein TcasGA2_TC030621, partial [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332376499|gb|AEE63389.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|118783673|ref|XP_313158.3| AGAP004242-PA [Anopheles gambiae str. PEST] gi|116128981|gb|EAA08641.4| AGAP004242-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195037617|ref|XP_001990257.1| GH18336 [Drosophila grimshawi] gi|193894453|gb|EDV93319.1| GH18336 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|170039638|ref|XP_001847635.1| mitochondrial import protein MMP37 [Culex quinquefasciatus] gi|167863259|gb|EDS26642.1| mitochondrial import protein MMP37 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|195108839|ref|XP_001999000.1| GI23316 [Drosophila mojavensis] gi|193915594|gb|EDW14461.1| GI23316 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195395278|ref|XP_002056263.1| GJ10320 [Drosophila virilis] gi|194142972|gb|EDW59375.1| GJ10320 [Drosophila virilis] Back     alignment and taxonomy information
>gi|41058199|gb|AAR99142.1| RE04953p [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query231
FB|FBgn0067628 342 CG33331 [Drosophila melanogast 0.926 0.625 0.453 1.4e-48
ZFIN|ZDB-GENE-051030-99 338 tamm41 "TAM41, mitochondrial t 0.896 0.612 0.469 3.7e-48
UNIPROTKB|F1SQA3 337 TAMM41 "Uncharacterized protei 0.891 0.611 0.492 3e-46
UNIPROTKB|Q32L81 335 TAMM41 "Mitochondrial transloc 0.883 0.608 0.492 4.4e-45
UNIPROTKB|Q9N4G7 321 Y71F9B.2 "Mitochondrial transl 0.909 0.654 0.399 4.4e-45
UNIPROTKB|Q6DJM2 338 tamm41 "Mitochondrial transloc 0.891 0.609 0.457 9.1e-45
UNIPROTKB|E1BUW5 337 TAMM41 "Uncharacterized protei 0.896 0.614 0.471 1.5e-44
UNIPROTKB|Q61X59 321 CBG04116 "Mitochondrial transl 0.909 0.654 0.408 2.4e-44
UNIPROTKB|Q96BW9316 TAMM41 "Mitochondrial transloc 0.891 0.651 0.469 1e-43
MGI|MGI:1916221 337 Tamm41 "TAM41, mitochondrial t 0.878 0.602 0.466 1.9e-42
FB|FBgn0067628 CG33331 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 102/225 (45%), Positives = 143/225 (63%)

Query:    17 DFFQIILNQFPTEYVVHAFGYGSGVFQQ------ANKSSIK----SMVDIILVVNDSEKF 66
             D ++  + +FP   V + F YGSGV QQ       N ++++    ++VD++  V D+  F
Sbjct:     3 DLYRRTVARFPLGSVSYMFAYGSGVKQQEGYGKVGNGNNLRPPPGTVVDLVFCVRDARGF 62

Query:    67 HSENLIRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFL 126
             H+ENL R+ +HYS L++ GP  + K QE  G+ +Y NT +P+ D+ +T+KYG+++++  L
Sbjct:    63 HAENLHRHPDHYSALRHLGPNFVAKYQERLGAGVYCNTLVPLPDVGITIKYGVVSQEELL 122

Query:   127 SDLLDWQHLYVAGRLHKPVFTF-HKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLL 185
              DLLDW+HLY+AGRLHKPV    +   N  L AA+  NL SA+  ALLLLPE F+ Y L 
Sbjct:   123 EDLLDWRHLYLAGRLHKPVTNLVNPSDNPPLKAALERNLVSALQVALLLLPEKFTAYGLF 182

Query:   186 STITNLSYSGDFRMTFGENKNKIDNIVQGQLEQFRLLYSPILDNI 230
              TI  LSY GDFRM FGENK K+ NIV  Q+  F  LY P L  +
Sbjct:   183 HTIAGLSYKGDFRMIFGENKQKVHNIVSPQINDFFALYQPSLGQL 227




GO:0005575 "cellular_component" evidence=ND
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
ZFIN|ZDB-GENE-051030-99 tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SQA3 TAMM41 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q32L81 TAMM41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9N4G7 Y71F9B.2 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DJM2 tamm41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|E1BUW5 TAMM41 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q61X59 CBG04116 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Caenorhabditis briggsae (taxid:6238)] Back     alignment and assigned GO terms
UNIPROTKB|Q96BW9 TAMM41 "Mitochondrial translocator assembly and maintenance protein 41 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1916221 Tamm41 "TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9N4G7TAM41_CAEELNo assigned EC number0.39900.90900.6542yesN/A
Q3B7H2TAM41_DANRENo assigned EC number0.46290.90900.6213yesN/A
Q3TUH1TAM41_MOUSENo assigned EC number0.46630.87870.6023yesN/A
Q96BW9TAM41_HUMANNo assigned EC number0.46910.89170.6518yesN/A
Q32L81TAM41_BOVINNo assigned EC number0.49280.88310.6089yesN/A
Q8INF2TAM41_DROMENo assigned EC number0.44880.92640.6257yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
pfam09139 324 pfam09139, Mmp37, Mitochondrial matrix Mmp37 5e-89
>gnl|CDD|220124 pfam09139, Mmp37, Mitochondrial matrix Mmp37 Back     alignment and domain information
 Score =  265 bits (679), Expect = 5e-89
 Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 12/221 (5%)

Query: 19  FQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKS-------MVDIILVVNDSEKFHSENL 71
            + IL+QFP   + +AF YGSGVF QA  S  ++       M+D I  V+D + +HS NL
Sbjct: 2   LRQILSQFPAP-ISYAFAYGSGVFPQAGYSKSENAQDGKKKMIDFIFGVDDPQHWHSLNL 60

Query: 72  IRNNNHYSFLKYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLD 131
            +N +HYS L+  GP  + KVQEN+G+ +YFN  + ++   +  KYG+++ +  L DLLD
Sbjct: 61  KQNPDHYSSLRLLGPKAISKVQENFGAGVYFNPLVNINGRLI--KYGVVSMETLLKDLLD 118

Query: 132 WQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAALLLLPEHFSEYDLLSTITNL 191
           W  LY+AGRL KPV    K  +  +  A   NL SA+ AALLLLPE F+E+ L  TI  L
Sbjct: 119 WDTLYLAGRLQKPVKVL-KPDDPRIRLANQYNLKSALTAALLLLPESFTEFQLYHTIAGL 177

Query: 192 SYSGDFRMT-FGENKNKIDNIVQGQLEQFRLLYSPILDNII 231
           SY GDFRM   GEN NK++NIV+G    FR LY PIL+++ 
Sbjct: 178 SYMGDFRMKLGGENPNKVNNIVKGNFANFRRLYKPILEDLP 218


MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane. It has been shown that MMP37 proteins possess the NTase fold but they have only one active site carboxylate and thus probably are not able to carry out enzymatic reaction. These potentially non-active members of NTase fold superfamily may bind ATP, hydrolysis of which is necessary for the translocation of proteins through the membrane. Length = 324

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 231
PF09139 330 Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR01 100.0
KOG2986|consensus313 100.0
cd0540393 NT_KNTase_like Nucleotidyltransferase (NT) domain 82.38
>PF09139 Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR015222 MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane [] Back     alignment and domain information
Probab=100.00  E-value=2.1e-93  Score=656.60  Aligned_cols=208  Identities=51%  Similarity=0.883  Sum_probs=200.8

Q ss_pred             HHHHHHhCCCCCeeEEEEecccccccCCC-------CCCCCceEEEEEeCCCchHHHHHhhcCccchhhHhhhccchhhh
Q psy14466         19 FQIILNQFPTEYVVHAFGYGSGVFQQANK-------SSIKSMVDIILVVNDSEKFHSENLIRNNNHYSFLKYFGPGVLKK   91 (231)
Q Consensus        19 ~~~il~~F~~~~v~~afaYGSgvf~Q~~~-------~~~~~miD~i~~V~d~~~wH~~Nl~~np~HYs~l~~lG~~~i~~   91 (231)
                      +++|+++|| +||++|||||||||+|.|+       ..+++||||||+|+||.+||++||++||+|||+|++||++.|++
T Consensus         2 l~~il~~f~-~pi~~afAYGSGVf~Q~g~~~~~~~~~~~~~miD~I~~V~~~~~wH~~Nl~~np~HYs~l~~lG~~~i~~   80 (330)
T PF09139_consen    2 LRRILSSFP-APIRYAFAYGSGVFPQAGYDAPTSSQKSKKPMIDFIFAVDDPQHWHSENLQQNPSHYSFLRYLGSRAISK   80 (330)
T ss_pred             hHHHHHhCC-CCceEEEEecccccccCCCcccccccCCCCCceEEEEecCChHHHHHHHHHhChhhhhHHHhcChHHHHH
Confidence            789999999 8899999999999999999       34899999999999999999999999999999999999999999


Q ss_pred             hhhhhCCceeeecceeCCCceeeEEEeeeeHHHHHHHhccccchhhccccccCceeeccCCHHHHHHHHHHHHHHHHHHH
Q psy14466         92 VQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQHLYVAGRLHKPVFTFHKLTNYELSAAIHLNLTSAVHAA  171 (231)
Q Consensus        92 ~q~~~gagVyyN~~V~~~~~~~~iKYGVis~~~l~~DL~~W~~lYlaGRl~KPV~~l~~~~~~~i~~a~~~Nl~sAl~~A  171 (231)
                      +|+++||||||||+|+++|  ..|||||||++||++||.+|++||+||||||||+++ .+++++++.|++.||++|+++|
T Consensus        81 ~q~~~gagvyfN~~v~~~~--~~iKYGVis~~~l~~DL~~W~~lYlaGRl~KPV~~l-~~~~~~~~~a~~~Nl~sA~~~A  157 (330)
T PF09139_consen   81 VQERFGAGVYFNPFVPWNG--RLIKYGVISTDDLCRDLLNWNSLYLAGRLQKPVKIL-RNDDPRLRLANQYNLRSALRAA  157 (330)
T ss_pred             HHhhcCCCeeeeccEEeCC--ceEEEEEeEHHHHHHHHHhcchhhhcccccCCeeec-cCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999  999999999999999999999999999999999998 3355599999999999999999


Q ss_pred             HHcCCCCCCHHHHHHHHHccccCCCccc-CCCCChhhhhhhhhhcHHHHHHHhHHHhhhh
Q psy14466        172 LLLLPEHFSEYDLLSTITNLSYSGDFRM-TFGENKNKIDNIVQGQLEQFRLLYSPILDNI  230 (231)
Q Consensus       172 LllLP~~fte~~Ly~~I~~LSY~GD~Rm-~~gE~~~Kv~nIV~~~~~~f~~lY~p~l~~~  230 (231)
                      ||||||+|||+|||++||||||+||||| ++||||+||.|||++|+++||+||.|+|+++
T Consensus       158 LLlLPe~FtE~~Ly~~Ia~LSY~GD~RM~~~gEn~~KV~nIV~~q~~~Fr~LY~p~l~~~  217 (330)
T PF09139_consen  158 LLLLPESFTEEDLYETIASLSYMGDFRMAIFGENPNKVRNIVSGQLDNFRELYSPLLQEL  217 (330)
T ss_pred             HHhCCcccCHHHHHHHHhccccccccccccCccCHHHHHHHHhccHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999 6699999999999999999999999999876



>KOG2986|consensus Back     alignment and domain information
>cd05403 NT_KNTase_like Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query231
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.7 bits (102), Expect = 3e-05
 Identities = 34/251 (13%), Positives = 82/251 (32%), Gaps = 54/251 (21%)

Query: 2   VSNLSNVTSKALTKHDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVN 61
             ++ ++    L+K +   II+++      +  F           +  ++  V+ +L +N
Sbjct: 35  CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW----TLLSKQEEMVQKFVEEVLRIN 90

Query: 62  DSEKFHSENLIRNNNHYSFL------KYFGPGVLKKVQENYGSKMYFNTHIPMDDLNVTL 115
                           Y FL      +   P ++ ++      ++Y N +      NV+ 
Sbjct: 91  ----------------YKFLMSPIKTEQRQPSMMTRMYIEQRDRLY-NDNQVFAKYNVSR 133

Query: 116 KYGIINRQHFLSDLLDWQHLYVAGRLH------KPVFTFHKLTNYELSAA----IH-LNL 164
               +  +  L +L       V   +       K         +Y++       I  LNL
Sbjct: 134 LQPYLKLRQALLELRP--AKNVL--IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL 189

Query: 165 TSAVHAALLLLPEHFSEYDLLSTIT-----NLSYSGDFRMTFGENKNKIDNIVQGQLEQF 219
            +      +L         LL  I         +S + ++     + ++  +++ +  + 
Sbjct: 190 KNCNSPETVLEMLQ----KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245

Query: 220 RLLYSPILDNI 230
            LL   +L N+
Sbjct: 246 CLL---VLLNV 253


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query231
3jz0_A287 Lincosamide nucleotidyltransferase; alpha-beta str 91.38
2rff_A111 Putative nucleotidyltransferase; NP_343093.1, nucl 82.56
>3jz0_A Lincosamide nucleotidyltransferase; alpha-beta structure, transferase-antibiotic CO; HET: APC CLY; 2.00A {Enterococcus faecium} PDB: 3jyy_A* Back     alignment and structure
Probab=91.38  E-value=0.52  Score=42.07  Aligned_cols=99  Identities=13%  Similarity=0.227  Sum_probs=66.8

Q ss_pred             CcHHHHHHHHHhC--CCCCeeEEEEecccccccCCCCCCCCceEEEEEeCC--CchHHHHHhhcCccchhhHhhhccchh
Q psy14466         14 TKHDFFQIILNQF--PTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVND--SEKFHSENLIRNNNHYSFLKYFGPGVL   89 (231)
Q Consensus        14 ~~~~~~~~il~~F--~~~~v~~afaYGSgvf~Q~~~~~~~~miD~i~~V~d--~~~wH~~Nl~~np~HYs~l~~lG~~~i   89 (231)
                      +..++++.|++..  . +.|++++.|||=......   .-.-+||+++|+|  ...+-.        + +++..+|+..+
T Consensus        23 ~~~e~l~~I~~~~~~d-~~i~av~l~GS~~~~~~D---~~SD~Di~~vV~~~~~~~f~~--------~-~Wl~~fG~~~~   89 (287)
T 3jz0_A           23 KQKELIANVKNLTESD-ERITACMMYGSFTKGEGD---QYSDIEFYIFLKHSITSNFDS--------S-NWLFDVAPYLM   89 (287)
T ss_dssp             HHHHHHHHHHHHHHHC-TTEEEEEECSGGGTTCCC---TTCCEEEEEEECGGGTTTCCH--------H-HHHHHHCCEEE
T ss_pred             CHHHHHHHHHHHHhcC-CCEEEEEEECCccCCCCC---CccceeEEEEEcCcchhhhhh--------H-HHHHHhhhhhe
Confidence            3456677776633  2 479999999999976433   6678999999998  556521        2 67999999877


Q ss_pred             hhhhhhhCCceeeecceeCCCceeeEEEeeeeHHHHHHHhcccc
Q psy14466         90 KKVQENYGSKMYFNTHIPMDDLNVTLKYGIINRQHFLSDLLDWQ  133 (231)
Q Consensus        90 ~~~q~~~gagVyyN~~V~~~~~~~~iKYGVis~~~l~~DL~~W~  133 (231)
                      . +.+.+|   |+ -.+--+|  .+|-.-+++.+++ .....|.
T Consensus        90 ~-f~~~~~---~~-l~lF~Dg--~riDl~l~~~~~l-~~~~~~~  125 (287)
T 3jz0_A           90 L-YKNEYG---TE-VVIFDNL--IRGEFHFLSEKDM-NIIPSFK  125 (287)
T ss_dssp             E-EECTTS---CE-EEEETTS--CEEEEEEEEGGGG-GGGGGGG
T ss_pred             E-eecccc---eE-EEEecCC--cEEEEEEeeHHHH-HHHhccc
Confidence            5 222222   22 1122377  8999999999987 4444454



>2rff_A Putative nucleotidyltransferase; NP_343093.1, nucleotidyltransferase domain, structural genomics; HET: MSE; 1.40A {Sulfolobus solfataricus P2} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query231
d1knya2125 Kanamycin nucleotidyltransferase (KNTase), N-termi 91.18
d2pbea2135 Aminoglycoside 6-adenylyltransferase AadK {Bacillu 83.28
d1no5a_100 Hypothetical protein HI0073 {Haemophilus influenza 81.29
>d1knya2 d.218.1.1 (A:1-125) Kanamycin nucleotidyltransferase (KNTase), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: Kanamycin nucleotidyltransferase (KNTase), N-terminal domain
domain: Kanamycin nucleotidyltransferase (KNTase), N-terminal domain
species: Staphylococcus aureus [TaxId: 1280]
Probab=91.18  E-value=0.098  Score=39.25  Aligned_cols=45  Identities=24%  Similarity=0.256  Sum_probs=37.6

Q ss_pred             HHHHHHHHHhCCCCCeeEEEEecccccccCCCCCCCCceEEEEEeCCCc
Q psy14466         16 HDFFQIILNQFPTEYVVHAFGYGSGVFQQANKSSIKSMVDIILVVNDSE   64 (231)
Q Consensus        16 ~~~~~~il~~F~~~~v~~afaYGSgvf~Q~~~~~~~~miD~i~~V~d~~   64 (231)
                      .+..++|.++|+ +.|..++.|||-++....   ..+-||+.+++++..
T Consensus        17 ~~~~~~i~~~~~-~~v~~i~L~GS~arg~~~---~~SDiDl~vv~~~~~   61 (125)
T d1knya2          17 HEIKERILDKYG-DDVKAIGVYGSLGRQTDG---PYSDIEMMCVMSTEE   61 (125)
T ss_dssp             HHHHHHHHHHHG-GGEEEEEEEHHHHHTCCC---TTCCEEEEEEESSTT
T ss_pred             HHHHHHHHHHhC-cceEEEEEECccccCCCC---CCCCeEEEEEECCCC
Confidence            446678899999 889999999999998765   677899999998753



>d2pbea2 d.218.1.13 (A:1-135) Aminoglycoside 6-adenylyltransferase AadK {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1no5a_ d.218.1.5 (A:) Hypothetical protein HI0073 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure