Psyllid ID: psy14475

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
MASVNSRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACAVQ
ccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccc
cccccccccEEEEEEccHHHHHHHHEcccHHHHHHHcccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHcccccccEEEcccHEEEEEEcHHHHHHHHHHccccccHHHHHHHHHHcc
masvnsrdSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQkmcvppiasadnvtsqltcksmpyqrrRLNTQVLTisqfepssqsvhstvrpsagvVQCLRYIVnhegpkalfrglvpnligvapsrAIYFCAYSQSkkfwnnilppdtaLVHVFSAACAVQ
MASVNSRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQfepssqsvhstvrPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACAVQ
MASVNSRDSFIHLvaggiagttaaivtCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACAVQ
********SFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTI***************PSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACA**
***********HLVAGGIAGTTAAIVTCPLEVVKTRLQSSVG***********IASADNVTSQLTCKSMPYQRRRLNTQVLTIS*****************GVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACAVQ
MASVNSRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQ**************SAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACAVQ
******RDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQ********************SMPYQRRRLNTQVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACAVQ
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASVNSRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACAVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query169 2.2.26 [Sep-21-2011]
Q5ZKP7 313 Solute carrier family 25 yes N/A 0.769 0.415 0.426 6e-29
Q96CQ1 311 Solute carrier family 25 yes N/A 0.757 0.411 0.426 2e-28
Q6DG32 311 Solute carrier family 25 yes N/A 0.757 0.411 0.408 2e-28
Q922G0 311 Solute carrier family 25 yes N/A 0.757 0.411 0.426 9e-28
Q9BSK2 321 Solute carrier family 25 no N/A 0.751 0.395 0.402 1e-26
Q6P036 314 Solute carrier family 25 no N/A 0.739 0.398 0.408 1e-26
Q1LZB3 321 Solute carrier family 25 no N/A 0.769 0.404 0.397 7e-26
Q3TZX3 320 Solute carrier family 25 no N/A 0.745 0.393 0.398 1e-25
Q9P6L7 361 Uncharacterized mitochond yes N/A 0.710 0.332 0.316 4e-13
P40556 373 Mitochondrial nicotinamid yes N/A 0.538 0.243 0.285 2e-09
>sp|Q5ZKP7|S2536_CHICK Solute carrier family 25 member 36 OS=Gallus gallus GN=SLC25A36 PE=2 SV=1 Back     alignment and function desciption
 Score =  126 bits (317), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 89/164 (54%), Gaps = 34/164 (20%)

Query: 4   VNSRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQ 63
           ++ RD+ +HL AGG  GT  AI+TCPLEVVKTRLQSS     I ++ +  +  A      
Sbjct: 1   MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVHLNTVNGA------ 54

Query: 64  LTCKSMPYQRRRLNTQVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGL 123
                                       SV+   R S G + CL+ I+  EGP++LFRGL
Sbjct: 55  ----------------------------SVNRVTRVSPGPLHCLKMILQKEGPRSLFRGL 86

Query: 124 VPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACA 167
            PNL+GVAPSRAIYF AYS  K+  NNI  PD+  VH+ SA  A
Sbjct: 87  GPNLVGVAPSRAIYFAAYSNCKEKLNNIFNPDSTQVHMISAGVA 130

Gallus gallus (taxid: 9031)
>sp|Q96CQ1|S2536_HUMAN Solute carrier family 25 member 36 OS=Homo sapiens GN=SLC25A36 PE=2 SV=1 Back     alignment and function description
>sp|Q6DG32|S2536_DANRE Solute carrier family 25 member 36-A OS=Danio rerio GN=slc25a36a PE=2 SV=1 Back     alignment and function description
>sp|Q922G0|S2536_MOUSE Solute carrier family 25 member 36 OS=Mus musculus GN=Slc25a36 PE=2 SV=1 Back     alignment and function description
>sp|Q9BSK2|S2533_HUMAN Solute carrier family 25 member 33 OS=Homo sapiens GN=SLC25A33 PE=1 SV=1 Back     alignment and function description
>sp|Q6P036|S2533_DANRE Solute carrier family 25 member 33 OS=Danio rerio GN=slc25a33 PE=2 SV=1 Back     alignment and function description
>sp|Q1LZB3|S2533_BOVIN Solute carrier family 25 member 33 OS=Bos taurus GN=SLC25A33 PE=2 SV=1 Back     alignment and function description
>sp|Q3TZX3|S2533_MOUSE Solute carrier family 25 member 33 OS=Mus musculus GN=Slc25a33 PE=2 SV=1 Back     alignment and function description
>sp|Q9P6L7|YKQ9_SCHPO Uncharacterized mitochondrial carrier C688.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC688.09 PE=3 SV=1 Back     alignment and function description
>sp|P40556|YIA6_YEAST Mitochondrial nicotinamide adenine dinucleotide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIA6 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query169
193711493 373 PREDICTED: solute carrier family 25 memb 0.928 0.420 0.574 7e-46
156542979 376 PREDICTED: solute carrier family 25 memb 0.905 0.406 0.559 7e-42
242013833 359 mitochondrial carrier protein, putative 0.917 0.431 0.541 2e-41
383851275 368 PREDICTED: solute carrier family 25 memb 0.917 0.421 0.561 4e-41
350402138 405 PREDICTED: LOW QUALITY PROTEIN: solute c 0.917 0.382 0.581 4e-41
380020539 404 PREDICTED: solute carrier family 25 memb 0.917 0.383 0.575 1e-40
91088711 348 PREDICTED: similar to CG18317 CG18317-PA 0.928 0.451 0.547 2e-40
340727096 405 PREDICTED: LOW QUALITY PROTEIN: solute c 0.917 0.382 0.569 3e-40
328784845 405 PREDICTED: solute carrier family 25 memb 0.917 0.382 0.560 4e-40
307205018 372 Solute carrier family 25 member 36-A [Ha 0.887 0.403 0.517 2e-35
>gi|193711493|ref|XP_001951913.1| PREDICTED: solute carrier family 25 member 36-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 100/174 (57%), Positives = 123/174 (70%), Gaps = 17/174 (9%)

Query: 6   SRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLT 65
           SRD+ IHLV+GG+AGTT A+VTCPLEVVKTRLQSS      +   VP IAS D+  S++T
Sbjct: 7   SRDTVIHLVSGGLAGTTGAVVTCPLEVVKTRLQSSSSFGATRYEYVPRIASEDSGGSRMT 66

Query: 66  CKSMP-YQRRRLNT-----------QVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNH 113
           CK++   QRRR NT           Q+LT SQ    SQ+  S      G++QCLR+IV  
Sbjct: 67  CKTISSLQRRRYNTLSGAGGRHSSTQILTFSQCGVGSQNTKS-----MGLLQCLRHIVKT 121

Query: 114 EGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDTALVHVFSAACA 167
           EGPKALF+GLVPN++GVAPSRAIYF AY+QSKKF+N +L PDT +VHV SA+ A
Sbjct: 122 EGPKALFKGLVPNIVGVAPSRAIYFGAYAQSKKFFNTVLNPDTPIVHVLSASFA 175

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|156542979|ref|XP_001602784.1| PREDICTED: solute carrier family 25 member 36-A-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242013833|ref|XP_002427605.1| mitochondrial carrier protein, putative [Pediculus humanus corporis] gi|212512020|gb|EEB14867.1| mitochondrial carrier protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|383851275|ref|XP_003701159.1| PREDICTED: solute carrier family 25 member 36-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|350402138|ref|XP_003486379.1| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 25 member 36-A-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380020539|ref|XP_003694140.1| PREDICTED: solute carrier family 25 member 36-A-like [Apis florea] Back     alignment and taxonomy information
>gi|91088711|ref|XP_975115.1| PREDICTED: similar to CG18317 CG18317-PA [Tribolium castaneum] gi|270012292|gb|EFA08740.1| hypothetical protein TcasGA2_TC006415 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|340727096|ref|XP_003401887.1| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 25 member 36-A-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|328784845|ref|XP_623212.2| PREDICTED: solute carrier family 25 member 36-A-like isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|307205018|gb|EFN83541.1| Solute carrier family 25 member 36-A [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query169
FB|FBgn0031359 365 CG18317 [Drosophila melanogast 0.940 0.435 0.421 1.9e-26
RGD|1583942 320 Slc25a33 "solute carrier famil 0.568 0.3 0.464 3.4e-23
UNIPROTKB|Q9BSK2 321 SLC25A33 "Solute carrier famil 0.568 0.299 0.454 1.1e-22
UNIPROTKB|F1RIH7 306 SLC25A33 "Uncharacterized prot 0.568 0.313 0.454 1.4e-22
UNIPROTKB|E2RL49 321 SLC25A33 "Uncharacterized prot 0.568 0.299 0.454 2e-22
UNIPROTKB|F1NB96 301 LOC418298 "Uncharacterized pro 0.568 0.318 0.469 2.9e-22
MGI|MGI:1917806 320 Slc25a33 "solute carrier famil 0.568 0.3 0.444 8.9e-22
UNIPROTKB|Q1LZB3 321 SLC25A33 "Solute carrier famil 0.568 0.299 0.434 1.2e-21
UNIPROTKB|E1C5T1 320 SLC25A33 "Uncharacterized prot 0.568 0.3 0.424 3.6e-21
WB|WBGene00011662 384 T09F3.2 [Caenorhabditis elegan 0.384 0.169 0.492 5.2e-20
FB|FBgn0031359 CG18317 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 75/178 (42%), Positives = 100/178 (56%)

Query:     5 NSRDSFIHLXXXXXXXXXXXXXXCPLEVVKTRLQSSVGIYQIQKMCVPPIAS-ADNVTSQ 63
             N+ D+ IHL              CPLEVVKTRLQSS       ++        A+   S+
Sbjct:     4 NTADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSE 63

Query:    64 LTCKSMPYQRRRLNTQVLTISQFEP------------SSQSVHSTVRPSAGVVQCLRYIV 111
             L     P QRR+L+T +L  ++ +P            S   + ST   S  +VQCLR+IV
Sbjct:    64 LL---RPEQRRKLSTTILR-NRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIV 119

Query:   112 NHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNI--LPPDTALVHVFSAACA 167
              +EGP+ALF+GL PNL+GVAPSRAIYFC YSQ+K   N++  +  D+ LVH+ SAA A
Sbjct:   120 QNEGPRALFKGLGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASA 177
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0006839 "mitochondrial transport" evidence=IEA
RGD|1583942 Slc25a33 "solute carrier family 25 (pyrimidine nucleotide carrier), member 33" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BSK2 SLC25A33 "Solute carrier family 25 member 33" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RIH7 SLC25A33 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RL49 SLC25A33 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NB96 LOC418298 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1917806 Slc25a33 "solute carrier family 25, member 33" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q1LZB3 SLC25A33 "Solute carrier family 25 member 33" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1C5T1 SLC25A33 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00011662 T09F3.2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query169
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-22
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 6e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 84.6 bits (210), Expect = 4e-22
 Identities = 44/143 (30%), Positives = 56/143 (39%), Gaps = 52/143 (36%)

Query: 10  FIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSM 69
              L+AGGIAG  AA VT PL+VVKTRLQSS      +                   K +
Sbjct: 6   LASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRK------------------YKGI 47

Query: 70  PYQRRRLNTQVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIG 129
                                             + C + I   EG + L++GL+PNL+ 
Sbjct: 48  ----------------------------------LDCFKKIYKEEGIRGLYKGLLPNLLR 73

Query: 130 VAPSRAIYFCAYSQSKKFWNNIL 152
           VAP+ AIYF  Y   KK     L
Sbjct: 74  VAPAAAIYFGTYETLKKLLLKKL 96

Length = 96
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 169
KOG0752|consensus320 99.89
KOG0764|consensus 299 99.86
KOG0760|consensus302 99.84
KOG0754|consensus 294 99.83
KOG0757|consensus 319 99.83
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.83
KOG0768|consensus323 99.82
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.82
PTZ00168259 mitochondrial carrier protein; Provisional 99.81
KOG0766|consensus297 99.81
KOG0752|consensus 320 99.81
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.8
KOG0762|consensus311 99.78
KOG0753|consensus317 99.76
KOG0758|consensus 297 99.76
KOG0757|consensus319 99.76
KOG0758|consensus297 99.76
KOG0770|consensus 353 99.76
KOG0751|consensus 694 99.75
KOG0753|consensus 317 99.74
KOG0760|consensus 302 99.74
KOG0764|consensus299 99.74
KOG0036|consensus 463 99.73
KOG0761|consensus361 99.73
KOG0761|consensus 361 99.72
KOG0759|consensus286 99.72
KOG0768|consensus323 99.72
KOG0756|consensus299 99.71
PTZ00168259 mitochondrial carrier protein; Provisional 99.68
KOG0769|consensus 308 99.67
KOG0756|consensus299 99.66
KOG0770|consensus 353 99.65
KOG0754|consensus294 99.63
KOG0763|consensus301 99.63
KOG0751|consensus694 99.61
KOG0762|consensus311 99.61
KOG0759|consensus286 99.61
KOG0749|consensus298 99.6
KOG0750|consensus304 99.58
KOG0036|consensus463 99.58
KOG0755|consensus 320 99.54
KOG0765|consensus333 99.54
KOG0767|consensus333 99.52
KOG0767|consensus 333 99.46
KOG0766|consensus297 99.4
KOG0755|consensus320 99.39
KOG0750|consensus304 99.38
KOG0765|consensus 333 99.35
KOG0763|consensus301 99.34
KOG0769|consensus308 99.28
KOG0749|consensus298 99.23
KOG2954|consensus427 98.37
KOG1519|consensus297 98.33
KOG1519|consensus 297 98.11
KOG2745|consensus321 98.11
KOG2745|consensus 321 96.41
KOG2954|consensus 427 89.29
>KOG0752|consensus Back     alignment and domain information 
Probab=99.89  E-value=7.1e-24  Score=173.05  Aligned_cols=110  Identities=32%  Similarity=0.522  Sum_probs=98.7

Q ss_pred             CchhHHHHHHHhHHHHHHHHhcCcHHHHHHHHhhcccccccccccCCCcccccCccccceeccccccccccccceeeeec
Q psy14475          6 SRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQ   85 (169)
Q Consensus         6 ~~~~~~~~laG~~ag~~~~~~~~Pld~iktr~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (169)
                      ..++..+++||++||+++.++++|+|++|+|+-.|..                                           
T Consensus       123 ~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~-------------------------------------------  159 (320)
T KOG0752|consen  123 SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGE-------------------------------------------  159 (320)
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecc-------------------------------------------
Confidence            5578999999999999999999999999999998865                                           


Q ss_pred             cccccccccccccCCCCHHHHHHHHHhhcCccccccccccccccccccceEEeeehHHHHH-HhhhcCC--CCchHHHHH
Q psy14475         86 FEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKK-FWNNILP--PDTALVHVF  162 (169)
Q Consensus        86 ~g~~~~~~~~~~~~~~g~~~~~~~i~r~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~lk~-~~~~~~~--~~~~~~~~~  162 (169)
                                 ...|+++.+++++|+|+|||+|||||+.|++++.+|+.+++|++||.+|+ .+....+  ..+.+.+++
T Consensus       160 -----------~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~  228 (320)
T KOG0752|consen  160 -----------LKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLL  228 (320)
T ss_pred             -----------cccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHH
Confidence                       33689999999999999999999999999999999999999999999999 5555432  357889999


Q ss_pred             hhhhccC
Q psy14475        163 SAACAVQ  169 (169)
Q Consensus       163 ~g~~aG~  169 (169)
                      +|++||+
T Consensus       229 ~GalAG~  235 (320)
T KOG0752|consen  229 CGALAGA  235 (320)
T ss_pred             HHHHHHH
Confidence            9999985

>KOG0764|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query169
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-18
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-17
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 9e-15
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-17
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-15
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-11
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score = 77.7 bits (192), Expect = 6e-18
 Identities = 25/145 (17%), Positives = 45/145 (31%), Gaps = 48/145 (33%)

Query: 12  HLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPY 71
             +AGG+A   +     P+E VK  LQ      QI                         
Sbjct: 10  DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI------------------------- 44

Query: 72  QRRRLNTQVLTISQFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVA 131
                                  S  +   G++ C+  I   +G  + +RG + N+I   
Sbjct: 45  -----------------------SAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYF 81

Query: 132 PSRAIYFCAYSQSKKFWNNILPPDT 156
           P++A+ F    + K+ +   +    
Sbjct: 82  PTQALNFAFKDKYKQIFLGGVDRHK 106
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query169
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.84
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.84
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.82
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.82
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=99.84  E-value=7.7e-22  Score=159.06  Aligned_cols=116  Identities=22%  Similarity=0.298  Sum_probs=94.4

Q ss_pred             CchhHHHHHHHhHHHHHHHHhcCcHHHHHHHHhhcccccccccccCCCcccccCccccceeccccccccccccceeeeec
Q psy14475          6 SRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQ   85 (169)
Q Consensus         6 ~~~~~~~~laG~~ag~~~~~~~~Pld~iktr~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (169)
                      ..+.+.++++|++||+++.++++|+|+||+|||++....       +.                                
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~-------~~--------------------------------   44 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASK-------QI--------------------------------   44 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCS-------SC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhccccc-------cc--------------------------------
Confidence            356788999999999999999999999999999985300       00                                


Q ss_pred             cccccccccccccCCCCHHHHHHHHHhhcCccccccccccccccccccceEEeeehHHHHHHhhhcCC-CC----chHHH
Q psy14475         86 FEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILP-PD----TALVH  160 (169)
Q Consensus        86 ~g~~~~~~~~~~~~~~g~~~~~~~i~r~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~lk~~~~~~~~-~~----~~~~~  160 (169)
                               +....|.++++++++|+++||++|||||+.++++|.+|.++++|.+||.+|+.+....+ ..    +....
T Consensus        45 ---------~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~  115 (297)
T 1okc_A           45 ---------SAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGN  115 (297)
T ss_dssp             ---------CGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHH
T ss_pred             ---------ccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccchHHHHHHH
Confidence                     00336889999999999999999999999999999999999999999999996543322 22    23567


Q ss_pred             HHhhhhccC
Q psy14475        161 VFSAACAVQ  169 (169)
Q Consensus       161 ~~~g~~aG~  169 (169)
                      +++|++||+
T Consensus       116 ~~ag~~ag~  124 (297)
T 1okc_A          116 LASGGAAGA  124 (297)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888888873
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 169
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-09
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-08
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 51.6 bits (122), Expect = 6e-09
 Identities = 35/179 (19%), Positives = 53/179 (29%), Gaps = 48/179 (26%)

Query: 12  HLVAGGIAGTTAAIVTCPLEVVKTRLQSSV--------------------------GIYQ 45
           +L +GG AG T+     PL+  +TRL + V                          G+YQ
Sbjct: 114 NLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQ 173

Query: 46  IQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTISQFEPSSQSVHSTVRPSA---- 101
              + V  I         +   +        N  ++       +  +V   V        
Sbjct: 174 GFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVR 233

Query: 102 -----------------GVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQ 143
                            G V C R I   EGPKA F+G   N++      A     Y +
Sbjct: 234 RRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDE 291
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query169
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.77
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.68
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=99.77  E-value=8.4e-20  Score=143.94  Aligned_cols=116  Identities=22%  Similarity=0.307  Sum_probs=95.9

Q ss_pred             CCchhHHHHHHHhHHHHHHHHhcCcHHHHHHHHhhcccccccccccCCCcccccCccccceeccccccccccccceeeee
Q psy14475          5 NSRDSFIHLVAGGIAGTTAAIVTCPLEVVKTRLQSSVGIYQIQKMCVPPIASADNVTSQLTCKSMPYQRRRLNTQVLTIS   84 (169)
Q Consensus         5 ~~~~~~~~~laG~~ag~~~~~~~~Pld~iktr~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (169)
                      +..++...++||++||+++.++++|||+||+|+|++....        .                               
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~--------~-------------------------------   42 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASK--------Q-------------------------------   42 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCS--------S-------------------------------
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCC--------C-------------------------------
Confidence            3457789999999999999999999999999999986410        0                               


Q ss_pred             ccccccccccccccCCCCHHHHHHHHHhhcCccccccccccccccccccceEEeeehHHHHHHhhhcCCCCc-----hHH
Q psy14475         85 QFEPSSQSVHSTVRPSAGVVQCLRYIVNHEGPKALFRGLVPNLIGVAPSRAIYFCAYSQSKKFWNNILPPDT-----ALV  159 (169)
Q Consensus        85 ~~g~~~~~~~~~~~~~~g~~~~~~~i~r~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~lk~~~~~~~~~~~-----~~~  159 (169)
                               .+....|+++++++++++++||+++||+|+.+.+++.+|..+++|.+||.+++.+........     ...
T Consensus        43 ---------~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (292)
T d1okca_          43 ---------ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAG  113 (292)
T ss_dssp             ---------CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHH
T ss_pred             ---------CCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhh
Confidence                     001456889999999999999999999999999999999999999999999999887754332     345


Q ss_pred             HHHhhhhcc
Q psy14475        160 HVFSAACAV  168 (169)
Q Consensus       160 ~~~~g~~aG  168 (169)
                      ++++|++||
T Consensus       114 ~~~~~~~a~  122 (292)
T d1okca_         114 NLASGGAAG  122 (292)
T ss_dssp             HHHHHHHHH
T ss_pred             hhhhhhhhh
Confidence            566666665
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure