Psyllid ID: psy14477

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110--
MKNSCGVWGGNLQENLGKPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYQNRDNTFYDAE
ccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccc
ccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccc
mknscgvwggnlqenlgkpkldFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYqnrdntfydae
MKNSCGVWGGNLQENLGKPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYQNRDNTFYDAE
MKNSCGVWGGNLQENLGKPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYQNRDNTFYDAE
****CGVWGGNLQENLGKPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYQNRDNTF****
********GGNLQENLGKPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVL***************
MKNSCGVWGGNLQENLGKPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYQNRDNTFYDAE
*******WGGNL*E***KPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYQ*R********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKNSCGVWGGNLQENLGKPKLDFSVLMFSLYPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAVVYVLTAYYQNRDNTFYDAE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query112 2.2.26 [Sep-21-2011]
Q922G0311 Solute carrier family 25 yes N/A 0.580 0.209 0.731 3e-21
Q96CQ1311 Solute carrier family 25 yes N/A 0.580 0.209 0.731 5e-21
Q5ZKP7313 Solute carrier family 25 yes N/A 0.580 0.207 0.716 7e-21
Q6DG32311 Solute carrier family 25 yes N/A 0.580 0.209 0.731 8e-21
Q9BSK2321 Solute carrier family 25 no N/A 0.580 0.202 0.671 3e-17
Q6P036314 Solute carrier family 25 no N/A 0.660 0.235 0.563 4e-17
Q1LZB3321 Solute carrier family 25 no N/A 0.625 0.218 0.625 5e-17
Q3TZX3320 Solute carrier family 25 no N/A 0.580 0.203 0.641 2e-16
A4RF23327 Mitochondrial thiamine py N/A N/A 0.491 0.168 0.440 3e-08
P38127377 Mitochondrial carrier pro yes N/A 0.642 0.190 0.392 2e-07
>sp|Q922G0|S2536_MOUSE Solute carrier family 25 member 36 OS=Mus musculus GN=Slc25a36 PE=2 SV=1 Back     alignment and function desciption
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 2/67 (2%)

Query: 31  YPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATY 90
           YP   EV RTRLREEGTKY+SFFQTL+ +  EEG   LYRGL+T L+RQIPNTAIMMATY
Sbjct: 245 YPH--EVVRTRLREEGTKYRSFFQTLSLIVQEEGYGSLYRGLTTHLVRQIPNTAIMMATY 302

Query: 91  EAVVYVL 97
           E VVY+L
Sbjct: 303 ELVVYLL 309

Mus musculus (taxid: 10090)
>sp|Q96CQ1|S2536_HUMAN Solute carrier family 25 member 36 OS=Homo sapiens GN=SLC25A36 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZKP7|S2536_CHICK Solute carrier family 25 member 36 OS=Gallus gallus GN=SLC25A36 PE=2 SV=1 Back     alignment and function description
>sp|Q6DG32|S2536_DANRE Solute carrier family 25 member 36-A OS=Danio rerio GN=slc25a36a PE=2 SV=1 Back     alignment and function description
>sp|Q9BSK2|S2533_HUMAN Solute carrier family 25 member 33 OS=Homo sapiens GN=SLC25A33 PE=1 SV=1 Back     alignment and function description
>sp|Q6P036|S2533_DANRE Solute carrier family 25 member 33 OS=Danio rerio GN=slc25a33 PE=2 SV=1 Back     alignment and function description
>sp|Q1LZB3|S2533_BOVIN Solute carrier family 25 member 33 OS=Bos taurus GN=SLC25A33 PE=2 SV=1 Back     alignment and function description
>sp|Q3TZX3|S2533_MOUSE Solute carrier family 25 member 33 OS=Mus musculus GN=Slc25a33 PE=2 SV=1 Back     alignment and function description
>sp|A4RF23|TPC1_MAGO7 Mitochondrial thiamine pyrophosphate carrier 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TPC1 PE=3 SV=2 Back     alignment and function description
>sp|P38127|RIM2_YEAST Mitochondrial carrier protein RIM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query112
193711493 373 PREDICTED: solute carrier family 25 memb 0.696 0.209 0.75 3e-26
195034927 357 GH11479 [Drosophila grimshawi] gi|193905 0.696 0.218 0.75 9e-26
19920528 365 CG18317, isoform A [Drosophila melanogas 0.696 0.213 0.75 1e-25
386768956 358 CG18317, isoform C [Drosophila melanogas 0.696 0.217 0.75 1e-25
198474071 359 GA25925 [Drosophila pseudoobscura pseudo 0.696 0.217 0.75 1e-25
195350389 357 GM16599 [Drosophila sechellia] gi|194123 0.696 0.218 0.75 1e-25
195114228 359 GI16974 [Drosophila mojavensis] gi|19391 0.696 0.217 0.75 1e-25
195433915 366 GK14935 [Drosophila willistoni] gi|19416 0.696 0.213 0.75 1e-25
195470537 357 GE15478 [Drosophila yakuba] gi|194173664 0.696 0.218 0.75 1e-25
386768958 272 CG18317, isoform D [Drosophila melanogas 0.696 0.286 0.75 1e-25
>gi|193711493|ref|XP_001951913.1| PREDICTED: solute carrier family 25 member 36-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 66/80 (82%), Gaps = 2/80 (2%)

Query: 31  YPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATY 90
           YP   EVARTRLREEGTKY+SFFQTL TV  EEG RGLYRGL+TQL+RQIPNTAIMMATY
Sbjct: 289 YPH--EVARTRLREEGTKYRSFFQTLLTVYGEEGPRGLYRGLTTQLVRQIPNTAIMMATY 346

Query: 91  EAVVYVLTAYYQNRDNTFYD 110
           EA VYV+T YY   +  FY+
Sbjct: 347 EAAVYVMTTYYSPNEAVFYE 366

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|195034927|ref|XP_001989006.1| GH11479 [Drosophila grimshawi] gi|193905006|gb|EDW03873.1| GH11479 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|19920528|ref|NP_608615.1| CG18317, isoform A [Drosophila melanogaster] gi|16198271|gb|AAL13964.1| LP02521p [Drosophila melanogaster] gi|22945465|gb|AAF51345.2| CG18317, isoform A [Drosophila melanogaster] gi|220946444|gb|ACL85765.1| CG18317-PA [synthetic construct] Back     alignment and taxonomy information
>gi|386768956|ref|NP_001245840.1| CG18317, isoform C [Drosophila melanogaster] gi|383291279|gb|AFH03517.1| CG18317, isoform C [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|198474071|ref|XP_002132619.1| GA25925 [Drosophila pseudoobscura pseudoobscura] gi|198138235|gb|EDY70021.1| GA25925 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195350389|ref|XP_002041723.1| GM16599 [Drosophila sechellia] gi|194123496|gb|EDW45539.1| GM16599 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|195114228|ref|XP_002001669.1| GI16974 [Drosophila mojavensis] gi|193912244|gb|EDW11111.1| GI16974 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195433915|ref|XP_002064952.1| GK14935 [Drosophila willistoni] gi|194161037|gb|EDW75938.1| GK14935 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|195470537|ref|XP_002087563.1| GE15478 [Drosophila yakuba] gi|194173664|gb|EDW87275.1| GE15478 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|386768958|ref|NP_001245841.1| CG18317, isoform D [Drosophila melanogaster] gi|383291280|gb|AFH03518.1| CG18317, isoform D [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query112
FB|FBgn0031359365 CG18317 [Drosophila melanogast 0.696 0.213 0.75 5.2e-26
UNIPROTKB|J9P7J9301 SLC25A36 "Uncharacterized prot 0.580 0.215 0.746 8e-21
MGI|MGI:1924909311 Slc25a36 "solute carrier famil 0.580 0.209 0.731 1e-20
RGD|1591928311 Slc25a36 "solute carrier famil 0.580 0.209 0.731 1e-20
RGD|1594959172 LOC686689 "similar to solute c 0.580 0.377 0.731 1e-20
UNIPROTKB|D4ACN9311 LOC686689 "Protein LOC686689" 0.580 0.209 0.731 1e-20
UNIPROTKB|F1MU04311 SLC25A36 "Uncharacterized prot 0.580 0.209 0.731 1.7e-20
UNIPROTKB|J3KQA4285 SLC25A36 "Solute carrier famil 0.580 0.228 0.731 1.7e-20
UNIPROTKB|Q96CQ1311 SLC25A36 "Solute carrier famil 0.580 0.209 0.731 1.7e-20
UNIPROTKB|F1SL48312 SLC25A36 "Uncharacterized prot 0.580 0.208 0.731 1.7e-20
FB|FBgn0031359 CG18317 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 60/80 (75%), Positives = 65/80 (81%)

Query:    31 YPSFAEVARTRLREEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATY 90
             YP   EVARTRLREEG KY SF+QTL TV  EEG  GLYRGL+TQL+RQIPNTAIMMATY
Sbjct:   287 YPH--EVARTRLREEGNKYNSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATY 344

Query:    91 EAVVYVLTAYYQNRDNTFYD 110
             EAVVYVLT  + N+ N FYD
Sbjct:   345 EAVVYVLTRRFNNKSNEFYD 364
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0006839 "mitochondrial transport" evidence=IEA
UNIPROTKB|J9P7J9 SLC25A36 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1924909 Slc25a36 "solute carrier family 25, member 36" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1591928 Slc25a36 "solute carrier family 25 (pyrimidine nucleotide carrier ), member 36" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1594959 LOC686689 "similar to solute carrier family 25, member 36" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|D4ACN9 LOC686689 "Protein LOC686689" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MU04 SLC25A36 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J3KQA4 SLC25A36 "Solute carrier family 25 member 36" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q96CQ1 SLC25A36 "Solute carrier family 25 member 36" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SL48 SLC25A36 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5ZKP7S2536_CHICKNo assigned EC number0.71640.58030.2076yesN/A
Q6DG32S2536_DANRENo assigned EC number0.73130.58030.2090yesN/A
Q96CQ1S2536_HUMANNo assigned EC number0.73130.58030.2090yesN/A
Q922G0S2536_MOUSENo assigned EC number0.73130.58030.2090yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query112
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-15
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score = 65.4 bits (160), Expect = 2e-15
 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 28 FSLYPSFAEVARTRL----REEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNT 83
             YP   +V +TRL         KYK        +  EEG RGLY+GL   L+R  P  
Sbjct: 21 TVTYP--LDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAA 78

Query: 84 AIMMATYEAV 93
          AI   TYE +
Sbjct: 79 AIYFGTYETL 88

Length = 96

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 112
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.81
KOG0752|consensus320 99.78
KOG0764|consensus 299 99.76
KOG0764|consensus299 99.74
KOG0757|consensus319 99.72
KOG0768|consensus323 99.7
KOG0757|consensus319 99.7
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.7
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 99.7
KOG0752|consensus320 99.69
PTZ00168259 mitochondrial carrier protein; Provisional 99.66
KOG0753|consensus317 99.66
KOG0760|consensus302 99.65
KOG0758|consensus297 99.65
KOG0751|consensus694 99.65
KOG0759|consensus286 99.64
KOG0758|consensus 297 99.64
KOG0762|consensus311 99.64
KOG0754|consensus 294 99.62
KOG0759|consensus 286 99.6
KOG0768|consensus323 99.59
PTZ00168259 mitochondrial carrier protein; Provisional 99.59
KOG0762|consensus 311 99.59
KOG0760|consensus302 99.57
KOG0753|consensus317 99.57
KOG0756|consensus299 99.53
KOG0761|consensus361 99.53
KOG0767|consensus333 99.53
KOG0765|consensus333 99.52
KOG0751|consensus 694 99.51
KOG0769|consensus 308 99.47
KOG0766|consensus297 99.45
KOG0754|consensus294 99.44
KOG0756|consensus299 99.43
KOG0770|consensus 353 99.41
KOG0770|consensus 353 99.39
KOG0761|consensus361 99.38
KOG0763|consensus301 99.37
KOG0036|consensus463 99.34
KOG0749|consensus298 99.34
KOG0765|consensus 333 99.32
KOG0763|consensus 301 99.31
KOG0036|consensus 463 99.3
KOG0755|consensus320 99.26
KOG0767|consensus 333 99.25
KOG0766|consensus 297 99.23
KOG0750|consensus304 99.18
KOG0755|consensus320 99.15
KOG0750|consensus304 99.13
KOG0769|consensus308 99.11
KOG0749|consensus 298 99.11
KOG2954|consensus427 98.95
KOG1519|consensus297 98.57
KOG2745|consensus321 98.28
KOG2745|consensus 321 97.52
KOG1519|consensus297 97.17
KOG2954|consensus 427 86.97
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information 
Probab=99.81  E-value=1.2e-19  Score=110.80  Aligned_cols=86  Identities=33%  Similarity=0.553  Sum_probs=74.7

Q ss_pred             hhcccCCchhHHHHHHHHhCCchhHHHHHHHH--h--CCCCCCCHHHHHHHHHHHhChhhcccChHHHHHHHHHHHhHHH
Q psy14477         12 LQENLGKPKLDFSVLMFSLYPSFAEVARTRLR--E--EGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMM   87 (112)
Q Consensus        12 ~~~~l~~~~~~~~~~~~~~~P~~~d~ik~r~q--~--~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~r~~~~~~~~f   87 (112)
                      ....+.+++.+++.+.++++|  +|++|+|+|  .  ....+.+++++++++++++|++|||||+.++++|.++..+++|
T Consensus         4 ~~~~~~~g~~ag~~~~~~~~P--ld~ik~~~q~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~   81 (95)
T PF00153_consen    4 FFANFIAGALAGAISTLVTYP--LDTIKTRMQSESPSGKQPYQGVWQCLRKIYKEEGIRGLYRGFGPSLLRSIPYTAIYF   81 (95)
T ss_dssp             CHHHHHHHHHHHHHHHHHCHH--HHHHHHHHHCCSCCCCSS-SSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhH--HHHHhHhhcccccccccccccccccccccchhhhhccccCChHHHHHHHHHHHHHHH
Confidence            344556667777777779999  999999999  2  2457889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHh
Q psy14477         88 ATYEAVVYVLTA   99 (112)
Q Consensus        88 ~~ye~~k~~~~~   99 (112)
                      ++||.+++.+.+
T Consensus        82 ~~~~~~~~~~~~   93 (95)
T PF00153_consen   82 GLYEYLKRLLSK   93 (95)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHh
Confidence            999999999864

Such proteins include: ADP, ATP carrier protein (ADP/ATP translocase); 2-oxoglutarate/malate carrier protein; phosphate carrier protein; tricarboxylate transport protein (or citrate transport protein); Graves disease carrier protein; yeast mitochondrial proteins MRS3 and MRS4; yeast mitochondrial FAD carrier protein; and many others. Structurally, these proteins can consist of up to three tandem repeats of a domain of approximately 100 residues, each domain containing two transmembrane regions.; PDB: 2LCK_A 2C3E_A 1OKC_A.
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query112
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-12
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-12
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-11
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-10
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-09
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-09
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 60.0 bits (146), Expect = 4e-12
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 35  AEVARTRL-----REEGTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMAT 89
            +V + R         G +Y+S  +   T+A EEG RGL++G S  + R        + T
Sbjct: 125 TDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVT 184

Query: 90  YEAVVYVLTAYYQNRDNTF 108
           Y+ +   L       D+  
Sbjct: 185 YDLIKDTLLKANLMTDDLP 203
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query112
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.78
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.75
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.74
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.74
3tgu_G81 UQCRQ, mitochondrial ubiquinol-cytochrome C reduct 83.29
1pp9_G81 Ubiquinol-cytochrome C reductase complex ubiquino 82.57
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.78  E-value=4.1e-20  Score=132.62  Aligned_cols=85  Identities=24%  Similarity=0.312  Sum_probs=74.5

Q ss_pred             ccCCchhHHHHHHHHhCCchhHHHHHHHHhCC-CCCCCHHHHHHHHHHHhChhhcccChHHHHHHHHHHHhHHHHHHHHH
Q psy14477         15 NLGKPKLDFSVLMFSLYPSFAEVARTRLREEG-TKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAV   93 (112)
Q Consensus        15 ~l~~~~~~~~~~~~~~~P~~~d~ik~r~q~~~-~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~r~~~~~~~~f~~ye~~   93 (112)
                      .+.+++.+++.+.++++|  +|++|+|+|.+. ..|+++++++++|+++||++|||||+.++++|.+|.++++|.+||.+
T Consensus       205 ~~~~g~~ag~~~~~~~~P--~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~  282 (303)
T 2lck_A          205 HFTSAFGAGFCTTVIASP--VDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQL  282 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHH--HHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCH--HHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHH
Confidence            344556666677779999  999999999984 46899999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhc
Q psy14477         94 VYVLTAYY  101 (112)
Q Consensus        94 k~~~~~~~  101 (112)
                      |+.+.+..
T Consensus       283 k~~l~~~~  290 (303)
T 2lck_A          283 KRALMAAY  290 (303)
T ss_dssp             HSCCCCHH
T ss_pred             HHHHHHhc
Confidence            98775443
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G* Back     alignment and structure
>1pp9_G Ubiquinol-cytochrome C reductase complex ubiquino protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.23.13.1 PDB: 1bgy_G* 1be3_G* 1l0n_G* 1ntk_G* 1ntm_G* 1ntz_G* 1nu1_G* 1l0l_G* 1ppj_G* 1sqb_G* 1sqp_G* 1sqq_G* 1sqv_G* 1sqx_G* 2a06_G* 2fyu_G* 2ybb_G* 1bcc_G* 2bcc_G* 3bcc_G* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 112
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-12
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 57.8 bits (138), Expect = 8e-12
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 46  GTKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEAV 93
              Y         +A +EG +  ++G  + ++R +   A ++  Y+ +
Sbjct: 246 DIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG-AFVLVLYDEI 292

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query112
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.66
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.66
d1ppjg_75 Ubiquinone-binding protein QP-C of cytochrome bc1 83.68
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=99.66  E-value=4e-17  Score=113.86  Aligned_cols=72  Identities=18%  Similarity=0.412  Sum_probs=61.4

Q ss_pred             chhHHHHHHHHhCCchhHHHHHHHHhCC------CCCCCHHHHHHHHHHHhChhhcccChHHHHHHHHHHHhHHHHHHHH
Q psy14477         19 PKLDFSVLMFSLYPSFAEVARTRLREEG------TKYKSFFQTLATVAHEEGARGLYRGLSTQLIRQIPNTAIMMATYEA   92 (112)
Q Consensus        19 ~~~~~~~~~~~~~P~~~d~ik~r~q~~~------~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~r~~~~~~~~f~~ye~   92 (112)
                      +..+.+.+.++++|  +|++|+|+|.+.      ..|+++++++++++++||++|||||+.++++|.++ +++.|.+||.
T Consensus       215 ~~~~~~~a~~~t~P--~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~  291 (292)
T d1okca_         215 AQTVTAVAGLVSYP--FDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE  291 (292)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHT
T ss_pred             HHHHHHHHhhcccc--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhc
Confidence            33444455568999  999999999983      25789999999999999999999999999999766 6899999996


Q ss_pred             H
Q psy14477         93 V   93 (112)
Q Consensus        93 ~   93 (112)
                      +
T Consensus       292 l  292 (292)
T d1okca_         292 I  292 (292)
T ss_dssp             C
T ss_pred             C
Confidence            3
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
>d1ppjg_ f.23.13.1 (G:) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure