Psyllid ID: psy14531

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MTHPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV
Secondary Structure (PSIPRED)
ccccEEEccccccccccccEEEEEccccccccccEEEEccccccccEEEEEcccccEEEccccEEEccccEEccccccEEEEEEEcEEcccccccccccccccccEEEEcccccccccccEEEEEcccccEEEcccEEEEccccccccccccEEEEcccccccccEEEEccccccccccEEEEEcccccccccccccccccEEccccccccccccEEEcccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccccccccEEEEEEccccccccccEEEEccccEcccEEEEEEcccEEEEcccEEEEccccccccccccEEcccccccccccccEEccccccccccEEEEEEccccEEEccEEEEEEcccEEEEcccEEEEcccccccccccEEEEEccccccccccEEEccccccccccEEEEEEccccEcccEEEcccEEEEccccccccccccEEEEccc
Coil and Loop (DISEMBL)
mthpvfrvsqgqwsgevptcqqiicpkivvenpyltlveqnntyrghaifqcswgyqlkgppdivcqkngswsgaipecnaFFFFFFffffnpvhcpvpalplnghliedptggpyrvGAILQFACNDrhhllgeetivctetgrwsrapprckarceypgepqngkiiplkffydpgdhiqvtcndgyvkplditptsgpycqsdgtwsldiphctnytdv
Flexible Loop (DISEMBL)
mthpvfrvsqgqwsgevptCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETivctetgrwsrapprCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPycqsdgtwsldiphCTNYTDV
Low Complexity Region (SEG)
MTHPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAffffffffffNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV
Disordered region (IsUnstruct)
*******VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY***
Disordered Region (DISOPRED)
MTHPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV
Disordered Region (DISEMBL)
MTHPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV
Disordered Region (DISPRO)
**HPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTHPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
Q09101	958	Locomotion-related protei	yes	N/A	0.887	0.205	0.416	6e-48
Q01102	768	P-selectin OS=Mus musculu	yes	N/A	0.878	0.253	0.303	6e-20
A2AVA0	3567	Sushi, von Willebrand fac	no	N/A	0.882	0.054	0.298	5e-19
P0C6B8	3564	Sushi, von Willebrand fac	yes	N/A	0.882	0.054	0.294	3e-18
Q4LDE5	3571	Sushi, von Willebrand fac	yes	N/A	0.882	0.054	0.294	5e-18
Q7Z408	3487	CUB and sushi domain-cont	no	N/A	0.828	0.052	0.293	1e-17
P98106	768	P-selectin OS=Rattus norv	no	N/A	0.878	0.253	0.280	6e-17
Q80T79	3707	CUB and sushi domain-cont	no	N/A	0.842	0.050	0.287	2e-16
Q7Z407	3707	CUB and sushi domain-cont	no	N/A	0.842	0.050	0.287	1e-15
P16109	830	P-selectin OS=Homo sapien	no	N/A	0.887	0.237	0.287	2e-15

>sp|Q09101|HIG_DROME Locomotion-related protein Hikaru genki OS=Drosophila melanogaster GN=hig PE=1 SV=2

 Score =  190 bits (483), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 24/221 (10%)

Query: 8   VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           ++ G WS   PTC  I CP++ +++P+L+L+E N +  G A+F+C WG++L GP  + C+
Sbjct: 756 LASGNWSSPTPTCHAIQCPRLELDDPHLSLIELNTSAWGRAVFKCQWGFKLTGPAQLDCE 815

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGP------YRVGAI 121
            +G WSG +P C              + C +P  PLNG +     GG         VGA+
Sbjct: 816 PSGVWSGPVPRCKV------------IQCVMPVAPLNGRI-----GGTSLSQRRLTVGAL 858

Query: 122 LQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHI 181
           + F+CND H L+GE +I+CTE G+WS +PP CK++C YPG+P NG I PLKF YD GD++
Sbjct: 859 VTFSCNDGHSLVGESSIICTENGQWSHSPPFCKSQCPYPGDPPNGLIAPLKFNYDAGDYL 918

Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
            V C  G+V+  +  P   P CQ DG WS  +P C +Y +V
Sbjct: 919 SVQCRPGFVQSYE-GPPERPKCQPDGRWSGPMPKCKSYEEV 958

Plays a role in the formation of functional neural circuits from the early stages of synapse formation. Has a role in the development of CNS functions involved in locomotor activity.
Drosophila melanogaster (taxid: 7227)

>sp|Q01102|LYAM3_MOUSE P-selectin OS=Mus musculus GN=Selp PE=1 SV=1

 Score = 97.8 bits (242), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 95/221 (42%), Gaps = 26/221 (11%)

Query: 8   VSQGQWSGEVPTCQQIIC-PKIVVENPYLTLVE--QNNTYRGHAIFQCSWGYQLKGPPDI 64
           ++ G W+G  P CQ + C P +  EN  +T V+   N+TY+    F C  G+ L GP  +
Sbjct: 431 LATGHWNGAPPECQAVSCAPMLSPENGSMTCVQPLGNSTYKSTCQFMCDEGFYLSGPERL 490

Query: 65  VCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
            C  +G W+G  P C A            + CP    P  G+L      G + VG+I  F
Sbjct: 491 DCSPSGHWTGTPPTCEA------------IKCPGIFAPEQGNLDCSHVHGEFGVGSICHF 538

Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKA---------RCEYPGEPQNGKIIPLKFFY 175
           +CN+   LLG E + CT +GRWS  PP CK          RC     P  G +       
Sbjct: 539 SCNEDFELLGSENVECTVSGRWSAPPPTCKGITSLPAPAVRCPALTTPGQGTMSCQHHLG 598

Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             G +   TC  G      +   +   C++ G W+   P C
Sbjct: 599 SFGPN--TTCYFGCKTGFTLRGANSLRCRASGQWTAVTPMC 637

Ca(2+)-dependent receptor for myeloid cells that binds to carbohydrates on neutrophils and monocytes. Mediates the interaction of activated endothelial cells or platelets with leukocytes. The ligand recognized is sialyl-Lewis X. Mediates rapid rolling of leukocyte rolling over vascular surfaces during the initial steps in inflammation through interaction with PSGL1.

Mus musculus (taxid: 10090)

>sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus GN=Svep1 PE=1 SV=1

 Score = 94.7 bits (234), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 102/241 (42%), Gaps = 45/241 (18%)

Query: 8    VSQGQWSGEVPTCQQIICP-KIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
            ++QGQW+  +P C++I C     +EN + +     + + G  + +QC+ GY L G   + 
Sbjct: 1672 LNQGQWTQPLPHCERIRCGLPPALENGFYS---AEDFHAGSTVTYQCTSGYYLLGDSRMF 1728

Query: 66   CQKNGSWSGAIPEC-----------------------------NAFFFFFFFFFFNPVHC 96
            C  NGSW+G  P C                             N  +         PV C
Sbjct: 1729 CTDNGSWNGISPSCLDVDECAVGSDCSEHASCLNTNGSYVCSCNPPYTGDGKNCAEPVKC 1788

Query: 97   PVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA- 155
              P  P NGH     +G  Y VG  + F+C++ H L+G  TI C ETG W R  P C+A 
Sbjct: 1789 KAPENPENGH----SSGEIYTVGTAVTFSCDEGHELVGVSTITCLETGEWDRLRPSCEAI 1844

Query: 156  RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
             C  P  P+NG +    F Y  G  +   C+ GY    D        C + G+WS   P 
Sbjct: 1845 SCGVPPVPENGGVDGSAFTY--GSKVVYRCDKGYTLSGDEESA----CLASGSWSHSSPV 1898

Query: 216  C 216
            C
Sbjct: 1899 C 1899

May play a role in the cell attachment process.

Mus musculus (taxid: 10090)

>sp|P0C6B8|SVEP1_RAT Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus GN=Svep1 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 102/241 (42%), Gaps = 45/241 (18%)

Query: 8    VSQGQWSGEVPTCQQIICP-KIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
            ++QGQWS  +P C++I C     +EN + +     + + G  + +QC+ GY L G   + 
Sbjct: 1668 LNQGQWSQPLPHCERIRCGLPPTLENGFYS---AEDLHAGSTVTYQCTSGYYLLGDSRMF 1724

Query: 66   CQKNGSWSGAIPEC--------------NAFFFFFFFFFF---------------NPVHC 96
            C  NGSW+G  P C              +A        +                 PV C
Sbjct: 1725 CTDNGSWNGISPSCLDVDECAVGSDCSEHASCLNTNGSYICSCKPPYTGDGKNCAEPVKC 1784

Query: 97   PVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA- 155
              P  P NGH +    G  Y VGA + F+C + H L+G   I C E+G W    P C+A 
Sbjct: 1785 KAPENPENGHSL----GKIYSVGAEVTFSCEEGHQLVGVRKITCLESGEWDHLRPSCEAI 1840

Query: 156  RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
             C  P  P+NG +    F Y  G  ++  C+ GY    D        C + G+WS   P 
Sbjct: 1841 SCGAPPVPENGGVDGSAFTY--GSKVRYRCDKGYTLAGDEESA----CLASGSWSHSSPV 1894

Query: 216  C 216
            C
Sbjct: 1895 C 1895

May play a role in the cell attachment process.

Rattus norvegicus (taxid: 10116)

>sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3

 Score = 91.3 bits (225), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 45/241 (18%)

Query: 8    VSQGQWSGEVPTCQQIICPKIV-VENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
            ++QGQW+  +P C++I C     +EN + +    ++ Y G  + +QC+ GY L G   + 
Sbjct: 1673 LNQGQWTQPLPHCERISCGVPPPLENGFHS---ADDFYAGSTVTYQCNNGYYLLGDSRMF 1729

Query: 66   CQKNGSWSGAIPEC--------------NAFFFFFFFFFF---------------NPVHC 96
            C  NGSW+G  P C              +A        +                 P+ C
Sbjct: 1730 CTDNGSWNGVSPSCLDVDECAVGSDCSEHASCLNVDGSYICSCVPPYTGDGKNCAEPIKC 1789

Query: 97   PVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA- 155
              P  P NGH     +G  Y VGA + F+C + + L+G   I C E+G W+   P CKA 
Sbjct: 1790 KAPGNPENGH----SSGEIYTVGAEVTFSCQEGYQLMGVTKITCLESGEWNHLIPYCKAV 1845

Query: 156  RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
             C  P  P+NG I  L F +  G  +   CN GY    D   +    C ++ +WS   P 
Sbjct: 1846 SCGKPAIPENGCIEELAFTF--GSKVTYRCNKGYTLAGDKESS----CLANSSWSHSPPV 1899

Query: 216  C 216
            C
Sbjct: 1900 C 1900

May play a role in the cell attachment process.

Homo sapiens (taxid: 9606)

>sp|Q7Z408|CSMD2_HUMAN CUB and sushi domain-containing protein 2 OS=Homo sapiens GN=CSMD2 PE=1 SV=2

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 31/215 (14%)

Query: 8    VSQGQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIV 65
            ++ G WSG    C    C  P+ +V      +  +N +YRG  ++QC+ G++L G    +
Sbjct: 2699 MANGLWSGSEVRCLAGHCGTPEPIVNG---HINGENYSYRGSVVYQCNAGFRLIGMSVRI 2755

Query: 66   CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
            CQ++  WSG  P C              V C  P  P +  +    +G  Y VGA+++++
Sbjct: 2756 CQQDHHWSGKTPFCVL------------VSCGHPGSPPHSQM----SGDSYTVGAVVRYS 2799

Query: 126  CNDRHHLLGEETIVCTETGRWSRAPPRCKAR----CEYPGEPQNGKIIPLKFFYDPGDHI 181
            C  +  L+G  T +C   G W+ + P C       C  PG P +G  I L   +DPG  +
Sbjct: 2800 CIGKRTLVGNSTRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHG--IRLGDSFDPGTVM 2857

Query: 182  QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
            + +C  G+V    +  +S   CQ++G+WS   P C
Sbjct: 2858 RFSCEAGHV----LRGSSERTCQANGSWSGSQPEC 2888

Homo sapiens (taxid: 9606)

>sp|P98106|LYAM3_RAT P-selectin OS=Rattus norvegicus GN=Selp PE=2 SV=1

 Score = 87.4 bits (215), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 90/221 (40%), Gaps = 26/221 (11%)

Query: 8   VSQGQWSGEVPTCQQIIC-PKIVVENPYLTLVE--QNNTYRGHAIFQCSWGYQLKGPPDI 64
           ++ G WS   P CQ + C P +  EN  +T ++   ++ Y+    F C  G+ L GP  +
Sbjct: 431 LATGHWSEAPPECQAVSCTPLLSPENGTMTCIQPLGHSNYKSTCQFMCDEGFYLSGPERL 490

Query: 65  VCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
            C  +G W+G+ P C A            + CP    P  G L      G + VG+   F
Sbjct: 491 DCSPSGHWTGSPPMCEA------------IKCPEIFAPEQGSLDCSHVHGEFSVGSTCHF 538

Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKA---------RCEYPGEPQNGKIIPLKFFY 175
           +CN+   LLG   + CT +GRWS  PP CK          RC     P  G +       
Sbjct: 539 SCNEEFELLGSRNVECTVSGRWSAPPPTCKGVTSLPVPSVRCPALTTPGQGTMSCRHHLE 598

Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             G +   TC  G      +   +   C + G W+   P C
Sbjct: 599 SFGPN--TTCYFGCKTGFTLRGANSLRCGASGQWTAVTPVC 637

Ca(2+)-dependent receptor for myeloid cells that binds to carbohydrates on neutrophils and monocytes. Mediates the interaction of activated endothelial cells or platelets with leukocytes. The ligand recognized is sialyl-Lewis X. Mediates rapid rolling of leukocyte rolling over vascular surfaces during the initial steps in inflammation through interaction with PSGL1.

Rattus norvegicus (taxid: 10116)

>sp|Q80T79|CSMD3_MOUSE CUB and sushi domain-containing protein 3 OS=Mus musculus GN=Csmd3 PE=2 SV=3

 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 84/212 (39%), Gaps = 25/212 (11%)

Query: 8    VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
            +S G W+G  P C+ + C                 T+    I+ C  GY L GP    C 
Sbjct: 3097 LSNGSWTGRQPECKAVQCGNPGTTANGKVFRIDGTTFSSSVIYSCLEGYILSGPSVRQCT 3156

Query: 68   KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
             NG+WSG++P C              + C  P +P NG    D     + VG  + + C 
Sbjct: 3157 ANGTWSGSLPNCTI------------ISCGDPGIPANGLRYGD----DFVVGQNVSYMCQ 3200

Query: 128  DRH--HLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
              +   L G     CT  G WS   P C+A  C  P +  NG++    F  D G  I   
Sbjct: 3201 PGYTIELNGSRVRTCTTNGTWSGVMPTCRAVTCSTPPQISNGRLEGTNF--DWGFSISYI 3258

Query: 185  CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
            C+ GY        T    C  +GTWS ++P C
Sbjct: 3259 CSAGYELSFPAVLT----CVGNGTWSGEVPQC 3286

Mus musculus (taxid: 10090)

>sp|Q7Z407|CSMD3_HUMAN CUB and sushi domain-containing protein 3 OS=Homo sapiens GN=CSMD3 PE=2 SV=3

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 83/212 (39%), Gaps = 25/212 (11%)

Query: 8    VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
            ++ G W+G  P C+ + C                 T+    I+ C  GY L GP    C 
Sbjct: 3097 LANGSWTGRQPECKAVQCGNPGTTANGKVFRIDGTTFSSSVIYSCMEGYILSGPSVRQCT 3156

Query: 68   KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
             NG+WSG +P C              + C  P +P NG    D     Y VG  + + C 
Sbjct: 3157 ANGTWSGTLPNCTI------------ISCGDPGIPANGLRYGD----DYVVGQNVSYMCQ 3200

Query: 128  DRH--HLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
              +   L G     CT  G WS   P C+A  C  P +  NG++    F  D G  I   
Sbjct: 3201 PGYTMELNGSRIRTCTINGTWSGVMPTCRAVTCPTPPQISNGRLEGTNF--DWGFSISYI 3258

Query: 185  CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
            C+ GY        T    C  +GTWS ++P C
Sbjct: 3259 CSPGYELSFPAVLT----CVGNGTWSGEVPQC 3286

Homo sapiens (taxid: 9606)

>sp|P16109|LYAM3_HUMAN P-selectin OS=Homo sapiens GN=SELP PE=1 SV=3

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 22/219 (10%)

Query: 8   VSQGQWSGEVPTCQQIIC-PKIVVENPYLTLVE--QNNTYRGHAIFQCSWGYQLKGPPDI 64
           ++ G W+   P CQ I C P +  +N  +T V+   +++Y+    F C  GY L GP  +
Sbjct: 493 LATGNWNSVPPECQAIPCTPLLSPQNGTMTCVQPLGSSSYKSTCQFICDEGYSLSGPERL 552

Query: 65  VCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
            C ++G W+ + P C A            + CP    P  G L    T G + VG+   F
Sbjct: 553 DCTRSGRWTDSPPMCEA------------IKCPELFAPEQGSLDCSDTRGEFNVGSTCHF 600

Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCK--ARCEYPGEPQNGKIIP----LKFFYDPG 178
           +C++   L G   + CT +GRWS  PP CK  A    PG        P    +   + PG
Sbjct: 601 SCDNGFKLEGPNNVECTTSGRWSATPPTCKGIASLPTPGLQCPALTTPGQGTMYCRHHPG 660

Query: 179 DH-IQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
                 TC  G      +   S   C+  G W+   P C
Sbjct: 661 TFGFNTTCYFGCNAGFTLIGDSTLSCRPSGQWTAVTPAC 699

Ca(2+)-dependent receptor for myeloid cells that binds to carbohydrates on neutrophils and monocytes. Mediates the interaction of activated endothelial cells or platelets with leukocytes. The ligand recognized is sialyl-Lewis X. Mediates rapid rolling of leukocyte rolling over vascular surfaces during the initial steps in inflammation through interaction with PSGL1.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
328713737	554	PREDICTED: locomotion-related protein Hi	0.900	0.361	0.469	4e-51
189235022	523	PREDICTED: similar to hikaru genki CG204	0.891	0.378	0.459	1e-50
307167690	475	Locomotion-related protein Hikaru genki	0.896	0.418	0.459	2e-50
157107150	881	hypothetical protein AaeL_AAEL004725 [Ae	0.905	0.228	0.443	5e-48
350396746	487	PREDICTED: locomotion-related protein Hi	0.896	0.408	0.448	6e-48
345484402	470	PREDICTED: locomotion-related protein Hi	0.896	0.423	0.434	8e-48
340715609	485	PREDICTED: locomotion-related protein Hi	0.896	0.410	0.441	1e-47
340715607	488	PREDICTED: locomotion-related protein Hi	0.896	0.407	0.441	1e-47
195442095	954	GK17970 [Drosophila willistoni] gi|19416	0.914	0.212	0.413	1e-46
195581836	924	GD10090 [Drosophila simulans] gi|1941927	0.887	0.213	0.416	3e-46

>gi|328713737|ref|XP_003245168.1| PREDICTED: locomotion-related protein Hikaru genki-like [Acyrthosiphon pisum]

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 132/213 (61%), Gaps = 13/213 (6%)

Query: 10  QGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
            G WS   P C  + CP I V++  L +VE N+TY   A F+C+WG+Q+ G   I C  +
Sbjct: 355 SGDWSNSPPDCIMVKCPPISVDDSRLIMVEYNDTYGKRAAFKCAWGFQMSGVNSIECLAD 414

Query: 70  GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR 129
            +WS  IP C                CP P +PLNG LIED   G + VG+++QF+C ++
Sbjct: 415 STWSHRIPTCTEIL------------CPPPVVPLNGLLIEDSAPGRHVVGSVVQFSCGEK 462

Query: 130 HHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
           H L+G+ ++VCTE G WS + P CKARCEYPGEP NG+IIPLKF+Y PGD +++TC  GY
Sbjct: 463 HQLIGKPSMVCTENGTWSHSTPYCKARCEYPGEPPNGRIIPLKFWYVPGDKLKITCLAGY 522

Query: 190 VKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           V PL +   S P C  DGTWS  +P C  YT+V
Sbjct: 523 VLPLPLE-ASPPVCLGDGTWSHTLPECIQYTNV 554

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235022|ref|XP_971621.2| PREDICTED: similar to hikaru genki CG2040-PB [Tribolium castaneum] gi|270004865|gb|EFA01313.1| hypothetical protein TcasGA2_TC003245 [Tribolium castaneum]

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 102/222 (45%), Positives = 137/222 (61%), Gaps = 24/222 (10%)

Query: 9   SQGQWSGEVPTCQQIICPKI----VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDI 64
           + G+WS  VPTC+ + C  +     +  P+L L E NN+Y G AIF C+WGY+L GPP I
Sbjct: 318 ASGKWSAPVPTCELVKCESLDTPGGLYEPHLHLEEHNNSYGGRAIFSCAWGYRLMGPPGI 377

Query: 65  VCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPT----GGPYRVGA 120
            C+ NG+WSG +P+C             P+ CP P +P+NGHLI+       GG Y VG+
Sbjct: 378 ECELNGNWSGPLPKCV------------PIQCPPPVIPVNGHLIQSEAAGMDGGRYAVGS 425

Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDH 180
           ++QFAC   H L GE +I+CTETG WS  PP CK RC Y GEP NG + P KF Y+PGD 
Sbjct: 426 LVQFACRGAHQLEGEASIICTETGFWSHPPPFCKPRCPYLGEPDNGLVAPTKFAYEPGDE 485

Query: 181 IQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           +Q+TC+ G+   L+  P     C  DG WS  +P+CTNY+++
Sbjct: 486 LQITCSPGFEARLEARPK----CLPDGRWSAPLPNCTNYSEI 523

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167690|gb|EFN61193.1| Locomotion-related protein Hikaru genki [Camponotus floridanus]

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/222 (45%), Positives = 134/222 (60%), Gaps = 23/222 (10%)

Query: 10  QGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
            G+WS  VP C++I CP I + +NP LTL+E NNTY G  +F C WGY+L G   I C+ 
Sbjct: 268 NGKWSASVPHCEEIECPAIDIADNPLLTLIEHNNTYGGKVVFTCMWGYKLSGSQSIKCEG 327

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPT--------GGPYRVGA 120
           NG W+G IP C              + CP+P  P +G +IE              Y+VGA
Sbjct: 328 NGRWNGTIPTCLE------------ITCPIPETPRSGRIIEQTRYSNKKRYRAQIYKVGA 375

Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDH 180
           +++FAC   H L+GE +I+CTE G WS  PP CK RC YPG+P +G+I PLKF+Y PGD+
Sbjct: 376 LVRFACLPGHQLIGEASIICTENGTWSHRPPVCKVRCPYPGDPPHGRIAPLKFWYKPGDN 435

Query: 181 IQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           IQVTC+ GYV PL+  P   P C+ +G WS   P C +Y +V
Sbjct: 436 IQVTCSPGYVTPLE--PVKKPSCRENGIWSAPPPPCRSYKEV 475

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107150|ref|XP_001649645.1| hypothetical protein AaeL_AAEL004725 [Aedes aegypti] gi|108879626|gb|EAT43851.1| AAEL004725-PA [Aedes aegypti]

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/223 (44%), Positives = 136/223 (60%), Gaps = 22/223 (9%)

Query: 8   VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           ++ G WS   P C  I CP + +E+P+L+LVE N +  G A+F+C+WGY+L GPP + C+
Sbjct: 673 LASGNWSSPTPNCHPIQCPPLFLEDPHLSLVELNTSAWGRAVFRCAWGYRLSGPPGLECE 732

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGG-------PYRVGA 120
            NG WSG IP C A            + CP P +P+NG +  D T G        Y VGA
Sbjct: 733 PNGHWSGPIPRCRA------------IQCPQPLVPINGRI--DGTSGLNTFGQRRYAVGA 778

Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDH 180
           ++ F+C + H L+GE +IVCTETG WS  PP CKA+C YPG+P NG I PLKF YDPGD+
Sbjct: 779 LVTFSCTEGHLLVGEASIVCTETGFWSHPPPFCKAQCPYPGDPPNGLIAPLKFHYDPGDY 838

Query: 181 IQVTCNDGYVK-PLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           + V C  G+V+   +  P + P C  +G WS  +P C +Y ++
Sbjct: 839 LTVQCRPGFVEHGANGGPLARPRCTPEGDWSGPVPQCRSYEEI 881

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350396746|ref|XP_003484650.1| PREDICTED: locomotion-related protein Hikaru genki-like [Bombus impatiens]

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/223 (44%), Positives = 133/223 (59%), Gaps = 24/223 (10%)

Query: 10  QGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
            G+WS E+P C+ I+CP I   ++  L L+E NNT+   A+F C WG++L G   I CQ 
Sbjct: 279 NGKWSAEIPRCETIVCPPIDKFDDTRLQLLEYNNTFGRRAVFACMWGHRLLGSQSIECQG 338

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPT---------GGPYRVG 119
           +GSWSG+ P C                CP P++P +G +IE               Y+VG
Sbjct: 339 DGSWSGSTPSCEEII------------CPTPSIPKSGRIIEQTNRHNSGRKHQTRMYKVG 386

Query: 120 AILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGD 179
           A+++FAC   H LLGE +I+CTE G WS  PP CK RC YPG+P +G+I PLKF+Y PGD
Sbjct: 387 ALVRFACVPGHQLLGEASIICTENGTWSHPPPVCKVRCPYPGDPPHGRIAPLKFWYKPGD 446

Query: 180 HIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           +IQVTC+ GYV PL+  P   P C+ +G WS   P C +Y DV
Sbjct: 447 NIQVTCSPGYVTPLE--PVRKPTCRENGIWSAPPPPCRSYKDV 487

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345484402|ref|XP_001604226.2| PREDICTED: locomotion-related protein Hikaru genki-like [Nasonia vitripennis]

 Score =  196 bits (497), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 96/221 (43%), Positives = 133/221 (60%), Gaps = 22/221 (9%)

Query: 10  QGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
            G+WS +VP C+ IICP +   NP L L+E NN+Y G A+F C WG++L+GP  I C  +
Sbjct: 264 NGKWSADVPHCEAIICPAVQPMNPNLQLLEHNNSYGGRAVFTCMWGHRLRGPQAIKCGSD 323

Query: 70  GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI--------EDPTGGPYRVGAI 121
           G+WSG+IP C              + CP P +P NG ++        +      +RVGA+
Sbjct: 324 GAWSGSIPTCTE------------ITCPTPPVPKNGRIVDHEQQLRQQHSKRRTHRVGAL 371

Query: 122 LQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHI 181
           ++F+C   H L+G+ +++CTE G WS  PP C  RC YPG+P +G+I PLKF+Y  GD I
Sbjct: 372 VRFSCLPGHQLIGQASVICTENGTWSHHPPICDVRCPYPGDPPHGRIAPLKFWYKSGDTI 431

Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           QVTC+ GYV PL+  P   P C+ +G WS   P C +Y DV
Sbjct: 432 QVTCSPGYVTPLE--PVRKPTCRENGIWSGPPPPCRSYRDV 470

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715609|ref|XP_003396303.1| PREDICTED: locomotion-related protein Hikaru genki-like isoform 2 [Bombus terrestris]

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 133/224 (59%), Gaps = 25/224 (11%)

Query: 10  QGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
            G+WS E+P C+ I+CP I   ++  L L+E NNT+   A+F C WG++L G   I CQ 
Sbjct: 276 NGKWSAEIPRCETIVCPPIDKFDDTRLQLLEYNNTFGRRAVFACMWGHRLLGSQSIECQG 335

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPT----------GGPYRV 118
           +GSWSG+ P C                CP P++P +G +IE                Y+V
Sbjct: 336 DGSWSGSTPSCEEII------------CPTPSIPKSGRIIEQTNRHNSGRKQHQTRMYKV 383

Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPG 178
           GA+++FAC   H LLGE +++CTE G WS  PP CK RC YPG+P +G+I PLKF+Y PG
Sbjct: 384 GALVRFACVPGHQLLGEASVICTENGTWSHPPPVCKVRCPYPGDPPHGRIAPLKFWYKPG 443

Query: 179 DHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           D+IQVTC+ GYV PL+  P   P C+ +G WS   P C +Y DV
Sbjct: 444 DNIQVTCSPGYVTPLE--PVRKPTCRENGIWSAPPPPCRSYKDV 485

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715607|ref|XP_003396302.1| PREDICTED: locomotion-related protein Hikaru genki-like isoform 1 [Bombus terrestris]

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 133/224 (59%), Gaps = 25/224 (11%)

Query: 10  QGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
            G+WS E+P C+ I+CP I   ++  L L+E NNT+   A+F C WG++L G   I CQ 
Sbjct: 279 NGKWSAEIPRCETIVCPPIDKFDDTRLQLLEYNNTFGRRAVFACMWGHRLLGSQSIECQG 338

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPT----------GGPYRV 118
           +GSWSG+ P C                CP P++P +G +IE                Y+V
Sbjct: 339 DGSWSGSTPSCEEII------------CPTPSIPKSGRIIEQTNRHNSGRKQHQTRMYKV 386

Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPG 178
           GA+++FAC   H LLGE +++CTE G WS  PP CK RC YPG+P +G+I PLKF+Y PG
Sbjct: 387 GALVRFACVPGHQLLGEASVICTENGTWSHPPPVCKVRCPYPGDPPHGRIAPLKFWYKPG 446

Query: 179 DHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
           D+IQVTC+ GYV PL+  P   P C+ +G WS   P C +Y DV
Sbjct: 447 DNIQVTCSPGYVTPLE--PVRKPTCRENGIWSAPPPPCRSYKDV 488

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195442095|ref|XP_002068795.1| GK17970 [Drosophila willistoni] gi|194164880|gb|EDW79781.1| GK17970 [Drosophila willistoni]

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 134/220 (60%), Gaps = 17/220 (7%)

Query: 8   VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           ++ G WS   PTC  I CP++++++P+L+L+E N +  G A+F+C WG++L GP  + C+
Sbjct: 747 LASGNWSSPSPTCHAIQCPRLMLDDPHLSLIELNTSAWGRAVFKCQWGFKLTGPAQLDCE 806

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFAC 126
             G WSG +P C              + C +P  PLNG +     +     VGA++ F+C
Sbjct: 807 PTGVWSGPVPRCKV------------IQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFSC 854

Query: 127 NDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCN 186
           ND H L+GE +I+CTE G WS +PP CK++C+YPG+P NG I PLKF YD GD++ V C 
Sbjct: 855 NDGHTLVGESSIICTENGFWSHSPPFCKSQCQYPGDPPNGLIAPLKFNYDAGDYLSVQCR 914

Query: 187 DGYVKPLDITPTSGPY----CQSDGTWSLDIPHCTNYTDV 222
            GYV+  +    +GP+    CQ DG WS  +P C +Y +V
Sbjct: 915 PGYVQTNEDLQKTGPFERPKCQPDGKWSDPLPKCRSYEEV 954

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195581836|ref|XP_002080736.1| GD10090 [Drosophila simulans] gi|194192745|gb|EDX06321.1| GD10090 [Drosophila simulans]

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 24/221 (10%)

Query: 8   VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           ++ G WS   PTC  I CP++ +++P+L+L+E N +  G A+F+C WG++L GP  + C+
Sbjct: 722 LASGNWSSPTPTCHAIQCPRLELDDPHLSLIELNTSAWGRAVFKCQWGFKLTGPAQLDCE 781

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGP------YRVGAI 121
            +G WSG +P C              + C +P  PLNG +     GG         VGA+
Sbjct: 782 PSGVWSGPVPRCKV------------IQCVMPVAPLNGRI-----GGTSLSQRRLTVGAL 824

Query: 122 LQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHI 181
           + F+CND H L+GE +I+CTE G+WS +PP CK++C YPG+P NG I PLKF YD GD++
Sbjct: 825 VTFSCNDGHSLVGESSIICTENGQWSHSPPFCKSQCPYPGDPPNGLIAPLKFNYDAGDYL 884

Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
            V C  G+V+  +  P   P CQ DG WS  +P C +Y +V
Sbjct: 885 SVQCRPGFVQSYE-GPPERPKCQPDGRWSGPMPKCKSYEEV 924

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
FB|FBgn0010114	958	hig "hikaru genki" [Drosophila	0.900	0.208	0.422	3.4e-50
FB|FBgn0032797	1678	CG10186 [Drosophila melanogast	0.878	0.116	0.324	1.5e-26
MGI|MGI:1928849	3567	Svep1 "sushi, von Willebrand f	0.824	0.051	0.3	2.4e-18
UNIPROTKB|F1SND0	3573	SVEP1 "Uncharacterized protein	0.608	0.037	0.355	1.1e-24
RGD|1588987	3564	Svep1 "sushi, von Willebrand f	0.824	0.051	0.3	2.4e-18
UNIPROTKB|P0C6B8	3564	Svep1 "Sushi, von Willebrand f	0.824	0.051	0.3	2.4e-18
UNIPROTKB|Q4LDE5	3571	SVEP1 "Sushi, von Willebrand f	0.828	0.051	0.272	8.5e-15
UNIPROTKB|F1MNH3	3573	SVEP1 "Uncharacterized protein	0.743	0.046	0.324	5.5e-17
UNIPROTKB|F1Q0A7	3253	SVEP1 "Uncharacterized protein	0.639	0.043	0.317	7.6e-15
UNIPROTKB|J9NWK3	3569	SVEP1 "Uncharacterized protein	0.639	0.039	0.317	8.4e-15

FB|FBgn0010114 hig "hikaru genki" [Drosophila melanogaster (taxid:7227)]

 Score = 520 (188.1 bits), Expect = 3.4e-50, Sum P(2) = 3.4e-50
 Identities = 92/218 (42%), Positives = 133/218 (61%)

Query:     8 VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
             ++ G WS   PTC  I CP++ +++P+L+L+E N +  G A+F+C WG++L GP  + C+
Sbjct:   756 LASGNWSSPTPTCHAIQCPRLELDDPHLSLIELNTSAWGRAVFKCQWGFKLTGPAQLDCE 815

Query:    68 KNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYR---VGAILQF 124
              +G WSG +P C              + C +P  PLNG +    T    R   VGA++ F
Sbjct:   816 PSGVWSGPVPRCKV------------IQCVMPVAPLNGRI--GGTSLSQRRLTVGALVTF 861

Query:   125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
             +CND H L+GE +I+CTE G+WS +PP CK++C YPG+P NG I PLKF YD GD++ V 
Sbjct:   862 SCNDGHSLVGESSIICTENGQWSHSPPFCKSQCPYPGDPPNGLIAPLKFNYDAGDYLSVQ 921

Query:   185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
             C  G+V+  +  P   P CQ DG WS  +P C +Y +V
Sbjct:   922 CRPGFVQSYE-GPPERPKCQPDGRWSGPMPKCKSYEEV 958

GO:0007155 "cell adhesion" evidence=ISS

GO:0005576 "extracellular region" evidence=NAS

GO:0008039 "synaptic target recognition" evidence=IMP

FB|FBgn0032797 CG10186 [Drosophila melanogaster (taxid:7227)]

 Score = 314 (115.6 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 71/219 (32%), Positives = 101/219 (46%)

Query:     5 VFRVSQGQWSGEVPTCQQIICPKIVV---ENPYLTLVEQ-NNTYRGHAIFQCSWGYQLKG 60
             +F +  G WS  +P C+ + C  I +    N     V   +    G A F C+ GY L+G
Sbjct:  1447 LFCLPSGNWSAPLPVCESVECGDIPLGMGSNASSPRVSVLSREVGGRAAFSCASGYGLRG 1506

Query:    61 PPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGA 120
             P + +C   G WS  +P C              V C  P  P NG+        PYR G 
Sbjct:  1507 PAEAICNPTGEWSAPLPTCVE------------VQCDNPGAPQNGYA---QGSAPYRAGD 1551

Query:   121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDH 180
             ++QF CN  + + G+  I C +  RWS   P+C   C YPG   +G++  +KF+Y  G+ 
Sbjct:  1552 VVQFNCNPEYMMQGQPIIACQDNARWSGGLPKCVQACSYPGTVISGRMSSVKFYYAIGES 1611

Query:   181 IQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC-TN 218
             I  TC+ G    LD+  +    C  +G WS  IP C TN
Sbjct:  1612 ITFTCDAG----LDLRGSKVLKCLKNGKWSSAIPTCVTN 1646

GO:0016020 "membrane" evidence=ISS

GO:0030414 "peptidase inhibitor activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

MGI|MGI:1928849 Svep1 "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" [Mus musculus (taxid:10090)]

 Score = 232 (86.7 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
 Identities = 63/210 (30%), Positives = 94/210 (44%)

Query:    11 GQWSGEVPTCQQIICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
             GQWS   PTC  + C +   VEN +L       T+   A FQC+ GY+  G P  VCQ N
Sbjct:  2189 GQWSKPTPTCHPVSCNEPPKVENGFLEHTT-GRTFESEARFQCNPGYKAAGSPVFVCQAN 2247

Query:    70 GSWSGAIP-ECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
               W    P  C             P++C  P    NG L     G  + VG+ +QF CN+
Sbjct:  2248 RHWHSDAPLSCT------------PLNCGKPPPIQNGFL----KGESFEVGSKVQFVCNE 2291

Query:   129 RHHLLGEETIVCTETGRWSRAP-PRC-KARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCN 186
              + L+G+ +  C ++G+WS+ P P+C   +C  P   +N  +  LK        + ++C 
Sbjct:  2292 GYELVGDNSWTCQKSGKWSKKPSPKCVPTKCAEPPLLENQLV--LKELASEVGVMTISCK 2349

Query:   187 DGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             +G+     +   S   C   G W+   P C
Sbjct:  2350 EGHA----LQGPSVLKCLPSGQWNGSFPIC 2375

GO:0003682 "chromatin binding" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1SND0 SVEP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 209 (78.6 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
 Identities = 53/149 (35%), Positives = 66/149 (44%)

Query:    69 NGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
             NGS+   I  C             P+ C  P  P NGH     +G  Y VGA + F+C D
Sbjct:  1767 NGSY---ICSCTPPYTGDGKNCAEPIKCKAPGNPENGH----SSGQIYTVGAEVTFSCED 1819

Query:   129 RHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
              H L+G   I C E+G WS   P C+A  C  P  P+NG I    F Y  G  +   CN 
Sbjct:  1820 GHQLMGVAKITCLESGEWSHEIPNCEAISCGAPAVPENGGIDGSAFTY--GSKVTYRCNK 1877

Query:   188 GYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             GY   L+    S   C + G+WS   P C
Sbjct:  1878 GYT--LEGEKESS--CLASGSWSHSPPVC 1902

GO:0003682 "chromatin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

RGD|1588987 Svep1 "sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 232 (86.7 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
 Identities = 63/210 (30%), Positives = 95/210 (45%)

Query:    11 GQWSGEVPTCQQIICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
             GQWS  +PTC  + C +   VEN +L       T+   A FQC+ GY+  G P  VCQ N
Sbjct:  2185 GQWSRPLPTCHPVSCNEPPKVENGFLEHTT-GRTFESEARFQCNPGYKAVGSPVFVCQAN 2243

Query:    70 GSWSGAIP-ECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
               W    P  C             P++C  P    NG L     G  + VG+ +QF CN+
Sbjct:  2244 RHWHSDAPLSCT------------PLNCGKPPPIQNGFL----RGESFEVGSKVQFVCNE 2287

Query:   129 RHHLLGEETIVCTETGRWSRAP-PRC-KARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCN 186
              + L+G+ +  C ++G+WS+ P P+C   +C  P   +N  +  LK        + ++C 
Sbjct:  2288 GYELVGDNSWTCQKSGKWSKKPSPKCVPTKCAEPPLLENQLV--LKELTSEVGVMTISCK 2345

Query:   187 DGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             +G+     +   S   C   G W+   P C
Sbjct:  2346 EGHA----LQGPSVLKCLPSGQWNGSFPVC 2371

GO:0003682 "chromatin binding" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|P0C6B8 Svep1 "Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 232 (86.7 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
 Identities = 63/210 (30%), Positives = 95/210 (45%)

Query:    11 GQWSGEVPTCQQIICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
             GQWS  +PTC  + C +   VEN +L       T+   A FQC+ GY+  G P  VCQ N
Sbjct:  2185 GQWSRPLPTCHPVSCNEPPKVENGFLEHTT-GRTFESEARFQCNPGYKAVGSPVFVCQAN 2243

Query:    70 GSWSGAIP-ECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
               W    P  C             P++C  P    NG L     G  + VG+ +QF CN+
Sbjct:  2244 RHWHSDAPLSCT------------PLNCGKPPPIQNGFL----RGESFEVGSKVQFVCNE 2287

Query:   129 RHHLLGEETIVCTETGRWSRAP-PRC-KARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCN 186
              + L+G+ +  C ++G+WS+ P P+C   +C  P   +N  +  LK        + ++C 
Sbjct:  2288 GYELVGDNSWTCQKSGKWSKKPSPKCVPTKCAEPPLLENQLV--LKELTSEVGVMTISCK 2345

Query:   187 DGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             +G+     +   S   C   G W+   P C
Sbjct:  2346 EGHA----LQGPSVLKCLPSGQWNGSFPVC 2371

GO:0003682 "chromatin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q4LDE5 SVEP1 "Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 197 (74.4 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
 Identities = 57/209 (27%), Positives = 91/209 (43%)

Query:    11 GQWSGEVPTCQQIICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
             GQWS  +PTC  + C +   VEN +L        +     +QC+ GY+  G P  VCQ N
Sbjct:  2190 GQWSSPIPTCHPVSCGEPPKVENGFLEHTT-GRIFESEVRYQCNPGYKSVGSPVFVCQAN 2248

Query:    70 GSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR 129
               W    P               P+ C  P    NG +     G  + VG+ +QF CN+ 
Sbjct:  2249 RHWHSESPLMCV-----------PLDCGKPPPIQNGFM----KGENFEVGSKVQFFCNEG 2293

Query:   130 HHLLGEETIVCTETGRWSR-APPRCK-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
             + L+G+ +  C ++G+W++ + P+C  A+C  P   +N  +  LK        +  +C +
Sbjct:  2294 YELVGDSSWTCQKSGKWNKKSNPKCMPAKCPEPPLLENQLV--LKELTTEVGVVTFSCKE 2351

Query:   188 GYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             G+V    +   S   C     W+   P C
Sbjct:  2352 GHV----LQGPSVLKCLPSQQWNDSFPVC 2376

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1MNH3 SVEP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
 Identities = 61/188 (32%), Positives = 85/188 (45%)

Query:     7 RVSQ--GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDI 64
             RV Q  GQW+G V TC++I+C   +        VE N+T     I+ C+ GY L+G P+ 
Sbjct:  3281 RVCQENGQWTGGVATCKKIMCEAPLKFLNGKAEVE-NSTAGPSVIYSCNRGYSLEGAPEA 3339

Query:    65 VCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVP-ALPLNGHLIEDPTGGPYRVGAILQ 123
              C +NG+WS  +P C            NP  CPVP  +P N  L E      + V   + 
Sbjct:  3340 SCTENGTWSHPVPLCKP----------NP--CPVPFVIPENAVLSEKE----FYVDQNVS 3383

Query:   124 FACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYPGEPQNGKIIPLKFFYDPGDHIQ 182
               C +   L G+ TI C     W++   +C K  C  P   +N   I     Y  GD I 
Sbjct:  3384 IKCREGFLLRGQSTITCNPDETWTQTSAKCEKISCGPPTHVENA--IARGVHYQYGDVIT 3441

Query:   183 VTCNDGYV 190
              +C  GY+
Sbjct:  3442 YSCYSGYM 3449

GO:0003682 "chromatin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1Q0A7 SVEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 207 (77.9 bits), Expect = 7.6e-15, P = 7.6e-15
 Identities = 52/164 (31%), Positives = 71/164 (43%)

Query:     6 FRVSQGQWSGEVPTCQQIICPKIVVENPYL--TLVEQNNTYRGHAIFQCSWGYQLKGPPD 63
             F +   +WSG  P C+ I CPK    NP +  ++   N TY     +QC+ GY L GP  
Sbjct:  2435 FCLQNREWSGTSPRCEAISCPK---PNPIMNGSVKGSNYTYLSVLYYQCNPGYVLNGPER 2491

Query:    64 IVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
               CQ+N  W  + P C+            PV C  P +  NG +     G  Y     ++
Sbjct:  2492 RTCQQNNKWDESEPTCS------------PVDCGSPPISANGQV----KGNQYTFQKEIE 2535

Query:   124 FACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYPGEPQNG 166
             + CN    L G+ + VC   G WS   P C   RC  P +  NG
Sbjct:  2536 YTCNVGFFLEGDRSRVCLADGHWSGTTPICVPVRCVTPPQVANG 2579

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|J9NWK3 SVEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 207 (77.9 bits), Expect = 8.4e-15, P = 8.4e-15
 Identities = 52/164 (31%), Positives = 71/164 (43%)

Query:     6 FRVSQGQWSGEVPTCQQIICPKIVVENPYL--TLVEQNNTYRGHAIFQCSWGYQLKGPPD 63
             F +   +WSG  P C+ I CPK    NP +  ++   N TY     +QC+ GY L GP  
Sbjct:  2754 FCLQNREWSGTSPRCEAISCPK---PNPIMNGSVKGSNYTYLSVLYYQCNPGYVLNGPER 2810

Query:    64 IVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
               CQ+N  W  + P C+            PV C  P +  NG +     G  Y     ++
Sbjct:  2811 RTCQQNNKWDESEPTCS------------PVDCGSPPISANGQV----KGNQYTFQKEIE 2854

Query:   124 FACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYPGEPQNG 166
             + CN    L G+ + VC   G WS   P C   RC  P +  NG
Sbjct:  2855 YTCNVGFFLEGDRSRVCLADGHWSGTTPICVPVRCVTPPQVANG 2898

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	222
cd00033	57	cd00033, CCP, Complement control protein (CCP) mod	6e-12
PHA02817	225	PHA02817, PHA02817, EEV Host range protein; Provis	6e-12
smart00032	56	smart00032, CCP, Domain abundant in complement con	2e-10
PHA02639	295	PHA02639, PHA02639, EEV host range protein; Provis	8e-09
cd00033	57	cd00033, CCP, Complement control protein (CCP) mod	1e-08
smart00032	56	smart00032, CCP, Domain abundant in complement con	2e-08
smart00032	56	smart00032, CCP, Domain abundant in complement con	2e-08
pfam00084	56	pfam00084, Sushi, Sushi domain (SCR repeat)	2e-08
PHA02927	263	PHA02927, PHA02927, secreted complement-binding pr	4e-08
cd00033	57	cd00033, CCP, Complement control protein (CCP) mod	8e-08
PHA02639	295	PHA02639, PHA02639, EEV host range protein; Provis	2e-07
PHA02927	263	PHA02927, PHA02927, secreted complement-binding pr	5e-07
PHA02927	263	PHA02927, PHA02927, secreted complement-binding pr	2e-06
PHA02817	225	PHA02817, PHA02817, EEV Host range protein; Provis	1e-05
pfam00084	56	pfam00084, Sushi, Sushi domain (SCR repeat)	1e-05
pfam00084	56	pfam00084, Sushi, Sushi domain (SCR repeat)	2e-05
PHA02831	268	PHA02831, PHA02831, EEV host range protein; Provis	4e-05
PHA02954	317	PHA02954, PHA02954, EEV membrane glycoprotein; Pro	9e-05
PHA02639	295	PHA02639, PHA02639, EEV host range protein; Provis	3e-04
PHA02817	225	PHA02817, PHA02817, EEV Host range protein; Provis	0.002

>gnl|CDD|153056 cd00033, CCP, Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

 Score = 58.6 bits (142), Expect = 6e-12
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
           CP P +P NG +    + G Y  G+ + ++CN+ + L+G  TI CTE G WS  PP C+
Sbjct: 1   CPPPPVPENGTVT--GSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE 57

SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. Length = 57

>gnl|CDD|165167 PHA02817, PHA02817, EEV Host range protein; Provisional

 Score = 62.3 bits (151), Expect = 6e-12
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 19/142 (13%)

Query: 88  FFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND-----RHHLLGEETIVCTE 142
           +   +   C  P    NG++    T   Y +G+ + F C +     R+ L+GE+ I+C +
Sbjct: 16  YSLCDLNKCCYPPSIKNGYIYNKKT--EYNIGSNVTFFCGNNTRGVRYTLVGEKNIICEK 73

Query: 143 TGRWSRAPPRCKA-RCEYPGEPQNGKI--IP--LKFFYDPGDHIQVTCNDGYVKPLDITP 197
            G+W++  P CK  RC +P   QNG +  IP   KF+Y+    +  +C  G+V  L  T 
Sbjct: 74  DGKWNKEFPVCKIIRCRFPAL-QNGFVNGIPDSKKFYYE--SEVSFSCKPGFV--LIGTK 128

Query: 198 TSGPYCQSDGTWSLDIPHCTNY 219
            S   C  + +W   +P C+  
Sbjct: 129 YS--VCGINSSWIPKVPICSRD 148

Length = 225

>gnl|CDD|214478 smart00032, CCP, Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

 Score = 54.1 bits (130), Expect = 2e-10
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           CP P    NG +    + G Y  G  + ++C+  + L+G  TI C E G WS  PP C
Sbjct: 1   CPPPPDIENGTVT--SSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56

The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII. Length = 56

>gnl|CDD|165022 PHA02639, PHA02639, EEV host range protein; Provisional

 Score = 54.3 bits (130), Expect = 8e-09
 Identities = 50/179 (27%), Positives = 69/179 (38%), Gaps = 33/179 (18%)

Query: 50  FQCSWGYQLKGPPDIVCQK---NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGH 106
           + C+  Y L G     C K   N  WS   P C                C  P   +NG 
Sbjct: 48  YTCNTDYALIGDRFRTCIKDKNNAIWSNKAPFCML------------KECNDPPSIINGK 95

Query: 107 LIEDPTGGPYRVGAILQFACND----RHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPG 161
           +        Y+VG  + + CN+    ++ L+G E I C +   W   PP CK   C +P 
Sbjct: 96  IYNKRE--MYKVGDEIYYVCNEHKGVQYSLVGNEKITCIQDKSWKPDPPICKMINCRFPA 153

Query: 162 EPQNGKI--IPL--KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
             QNG I  IP   KF+Y     +  +C  G+    D+       C  + TW   IP C
Sbjct: 154 L-QNGYINGIPSNKKFYYK--TRVGFSCKSGF----DLVGEKYSTCNINATWFPSIPTC 205

Length = 295

>gnl|CDD|153056 cd00033, CCP, Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

 Score = 49.4 bits (118), Expect = 1e-08
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C  P  P+NG +   K  Y  G  +  +CN+GY   L  + T    C  +G WS   P C
Sbjct: 1   CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYT--LVGSSTI--TCTENGGWSPPPPTC 56

SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. Length = 57

>gnl|CDD|214478 smart00032, CCP, Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C  P + +NG +      Y  GD +  +C+ GY   L  + T    C  +GTWS   P C
Sbjct: 1   CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYT--LIGSSTI--TCLENGTWSPPPPTC 56

The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII. Length = 56

>gnl|CDD|214478 smart00032, CCP, Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
          CP    +EN  +T      +Y     + C  GY L G   I C +NG+WS   P C
Sbjct: 1  CPPPPDIENGTVTSSSGTYSYGDTVTYSCDPGYTLIGSSTITCLENGTWSPPPPTC 56

The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII. Length = 56

>gnl|CDD|215703 pfam00084, Sushi, Sushi domain (SCR repeat)

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           CP P    +G +    T   Y+VG+++++ C+  + L+G   I C + G WS   P C
Sbjct: 1   CPAPPPIPHGVI--STTKNSYQVGSVVRYECDPGYVLVGSSVITCQDDGTWSPPLPEC 56

Length = 56

>gnl|CDD|222943 PHA02927, PHA02927, secreted complement-binding protein; Provisional

 Score = 52.0 bits (124), Expect = 4e-08
 Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 25/172 (14%)

Query: 50  FQCSWGYQLKGPPDIVCQ--KNGS--WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNG 105
           + C+ GYQL G     C+    GS  W+   P C +            V C  P    NG
Sbjct: 110 YSCNSGYQLIGESKSYCELGSTGSMVWNPEAPICES------------VKCQSPPSISNG 157

Query: 106 HLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQ 164
               +     Y  G+++ ++CN  + L+G   ++C+  G WS  PP C+  +C +P    
Sbjct: 158 R--HNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCS-GGEWSD-PPTCQIVKCPHPTISN 213

Query: 165 NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
                  K  Y   D++   C  GY     ++ +S   C    TW  ++P C
Sbjct: 214 GYLSSGFKRSYSYNDNVDFKCKYGY----KLSGSSSSTCSPGNTWQPELPKC 261

Length = 263

>gnl|CDD|153056 cd00033, CCP, Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

 Score = 47.5 bits (113), Expect = 8e-08
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
          CP   V EN  +T  + + +Y     + C+ GY L G   I C +NG WS   P C
Sbjct: 1  CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTC 56

SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function. Length = 57

>gnl|CDD|165022 PHA02639, PHA02639, EEV host range protein; Provisional

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE---TGRWSRAP 150
           ++C  P    NG + E      Y +G ++++ CN  + L+G+    C +      WS   
Sbjct: 20  IYCDKPDDISNGFITE--LMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKNNAIWSNKA 77

Query: 151 PRCKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTW 209
           P C  + C  P    NGKI   +  Y  GD I   CN+       +       C  D +W
Sbjct: 78  PFCMLKECNDPPSIINGKIYNKREMYKVGDEIYYVCNEHKGVQYSLVGNEKITCIQDKSW 137

Query: 210 SLDIPHC 216
             D P C
Sbjct: 138 KPDPPIC 144

Length = 295

>gnl|CDD|222943 PHA02927, PHA02927, secreted complement-binding protein; Provisional

 Score = 48.5 bits (115), Expect = 5e-07
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTL-VEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           S G+WS + PTCQ + CP   + N YL+   +++ +Y  +  F+C +GY+L G     C 
Sbjct: 191 SGGEWS-DPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCS 249

Query: 68  KNGSWSGAIPEC 79
              +W   +P+C
Sbjct: 250 PGNTWQPELPKC 261

Length = 263

>gnl|CDD|222943 PHA02927, PHA02927, secreted complement-binding protein; Provisional

 Score = 47.0 bits (111), Expect = 2e-06
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 15/126 (11%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVC----TETGRWSRAPP 151
           CP P    NG L      G    G+ + ++CN  + L+GE    C    T +  W+   P
Sbjct: 86  CPSPRDIDNGQL----DIGGVDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAP 141

Query: 152 RCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
            C++ +C+ P    NG+    + FY  G  +  +CN GY     +   SG  C S G WS
Sbjct: 142 ICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGY----SLIGNSGVLC-SGGEWS 196

Query: 211 LDIPHC 216
            D P C
Sbjct: 197 -DPPTC 201

Length = 263

>gnl|CDD|165167 PHA02817, PHA02817, EEV Host range protein; Provisional

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNT--YRGHAIFQCSWGYQLKGPPDIVCQK 68
           G+W+ E P C+ I C    ++N ++  +  +    Y     F C  G+ L G    VC  
Sbjct: 75  GKWNKEFPVCKIIRCRFPALQNGFVNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGI 134

Query: 69  NGSWSGAIPEC 79
           N SW   +P C
Sbjct: 135 NSSWIPKVPIC 145

Length = 225

>gnl|CDD|215703 pfam00084, Sushi, Sushi domain (SCR repeat)

 Score = 41.0 bits (96), Expect = 1e-05
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C  P    +G I   K  Y  G  ++  C+ GYV       T    CQ DGTWS  +P C
Sbjct: 1   CPAPPPIPHGVISTTKNSYQVGSVVRYECDPGYVLVGSSVIT----CQDDGTWSPPLPEC 56

Length = 56

>gnl|CDD|215703 pfam00084, Sushi, Sushi domain (SCR repeat)

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
          CP    + +  ++  + +        ++C  GY L G   I CQ +G+WS  +PEC
Sbjct: 1  CPAPPPIPHGVISTTKNSYQVGSVVRYECDPGYVLVGSSVITCQDDGTWSPPLPEC 56

Length = 56

>gnl|CDD|165176 PHA02831, PHA02831, EEV host range protein; Provisional

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 21/69 (30%), Positives = 31/69 (44%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG 70
            QW  + P C+ I C    ++N +L + E+   Y     F+C  G+ L G     C  N 
Sbjct: 127 KQWVPKYPVCKLIRCKYPALQNGFLNVFEKKFYYGDIVNFKCKKGFILLGSSVSTCDINS 186

Query: 71  SWSGAIPEC 79
            W   IP+C
Sbjct: 187 IWYPGIPKC 195

Length = 268

>gnl|CDD|165263 PHA02954, PHA02954, EEV membrane glycoprotein; Provisional

 Score = 42.4 bits (99), Expect = 9e-05
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)

Query: 13  WSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSW 72
           W+  V TC    C  + +E+     V++  ++  H    C  GY++ G   I C  N SW
Sbjct: 119 WNDTV-TCPNAECQPLQLEHGSCQPVKEKYSFGEHITINCDVGYEVIGASYISCTAN-SW 176

Query: 73  SGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHL 132
           +  IP C                C +P+L  NG +    +G  + +G ++  +C     L
Sbjct: 177 N-VIPSCQQ-------------KCDIPSLS-NGLI----SGSTFSIGGVIHLSCKSGFTL 217

Query: 133 LGEETIVCTETGRWSRAPPRC 153
            G  +  C + G+W+   P C
Sbjct: 218 TGSPSSTCID-GKWNPVLPIC 237

Length = 317

>gnl|CDD|165022 PHA02639, PHA02639, EEV host range protein; Provisional

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 13  WSGEVPTCQQIICPKIVVENPYLTLVEQNNT--YRGHAIFQCSWGYQLKGPPDIVCQKNG 70
           W  + P C+ I C    ++N Y+  +  N    Y+    F C  G+ L G     C  N 
Sbjct: 137 WKPDPPICKMINCRFPALQNGYINGIPSNKKFYYKTRVGFSCKSGFDLVGEKYSTCNINA 196

Query: 71  SWSGAIPEC 79
           +W  +IP C
Sbjct: 197 TWFPSIPTC 205

Length = 295

>gnl|CDD|165167 PHA02817, PHA02817, EEV Host range protein; Provisional

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 56  YQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGP 115
           Y L G  +I+C+K+G W+   P C              + C  PAL  NG +   P    
Sbjct: 61  YTLVGEKNIICEKDGKWNKEFPVCKI------------IRCRFPALQ-NGFVNGIPDSKK 107

Query: 116 YRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           +   + + F+C     L+G +  VC     W    P C
Sbjct: 108 FYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPIC 145

Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
PHA02927	263	secreted complement-binding protein; Provisional	100.0
PHA02639	295	EEV host range protein; Provisional	100.0
PHA02927	263	secreted complement-binding protein; Provisional	100.0
PHA02954	317	EEV membrane glycoprotein; Provisional	99.98
PHA02831	268	EEV host range protein; Provisional	99.97
PHA02639	295	EEV host range protein; Provisional	99.95
PHA02831	268	EEV host range protein; Provisional	99.95
PHA02954	317	EEV membrane glycoprotein; Provisional	99.95
PHA02817	225	EEV Host range protein; Provisional	99.93
PHA02817	225	EEV Host range protein; Provisional	99.91
cd00033	57	CCP Complement control protein (CCP) modules (aka	99.28
smart00032	57	CCP Domain abundant in complement control proteins	99.27
PF00084	56	Sushi: Sushi domain (SCR repeat); InterPro: IPR000	99.26
cd00033	57	CCP Complement control protein (CCP) modules (aka	99.26
smart00032	57	CCP Domain abundant in complement control proteins	99.24
PF00084	56	Sushi: Sushi domain (SCR repeat); InterPro: IPR000	99.22
PF14704	152	DERM: Dermatopontin	92.6
smart00008	70	HormR Domain present in hormone receptors.	88.61
PF02793	66	HRM: Hormone receptor domain; InterPro: IPR001879	86.87
smart00008	70	HormR Domain present in hormone receptors.	84.77

>PHA02927 secreted complement-binding protein; Provisional

Probab=100.00  E-value=7.8e-39  Score=261.60  Aligned_cols=191  Identities=27%  Similarity=0.623  Sum_probs=168.4

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC----eeeCCCC
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG----SWSGAIP   77 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g----~W~~~~p   77 (222)
                      ..++|+.+| |+. .|.|+++.|+.|+. +||.+..  ..+.+|++|+|+|++||.|.|...++|+.++    +|+.+.|
T Consensus        66 ~~~~C~~~g-Ws~-~p~C~~~~C~~p~~i~NG~~~~--~~~~~G~~v~y~C~~Gy~l~G~~~~~C~~~~~g~~~Ws~~~P  141 (263)
T PHA02927         66 IYAKCTGTG-WTL-FNQCIKRRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAP  141 (263)
T ss_pred             cEEEecCCC-CCC-CCcEEeCCCcCCCCCCCCEEeC--CCccCCCEEEEECCCCCEEcCCCeeEEEeCCCCcceECCCCC
Confidence            357899877 995 68999999999987 9999875  4578999999999999999999999998753    7999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ec
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-AR  156 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~  156 (222)
                      .|+.            +.|+.|+.+.||.+..  ....|.+|++|+|.|+.||.|.|...++|+ +|+|+. +|.|+ +.
T Consensus       142 ~C~~------------~~C~~P~~~~nG~~~~--~~~~y~~g~~v~y~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~C~~v~  205 (263)
T PHA02927        142 ICES------------VKCQSPPSISNGRHNG--YEDFYTDGSVVTYSCNSGYSLIGNSGVLCS-GGEWSD-PPTCQIVK  205 (263)
T ss_pred             cccc------------ccCCCCCCCCCcEEcC--CcccccCCCEEEEECCCCCEECCCCeeEEC-CCccCC-CCeEeEeE
Confidence            9999            8999999999998753  245688999999999999999999999997 899997 79999 79


Q ss_pred             CCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        157 CEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       157 C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      |..|. +.||.+.. .+..|.+|++|+|.|++||.+.|+    ..++|+.+|+|++++|+|++
T Consensus       206 C~~P~-i~ng~~~~~~k~~y~~g~~v~y~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~  263 (263)
T PHA02927        206 CPHPT-ISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGS----SSSTCSPGNTWQPELPKCVR  263 (263)
T ss_pred             CcCCC-CCCCEEecCCCCccccCCEEEEECCCCCeEcCC----CCeEECCCCEECCCCCeecC
Confidence            99874 67887764 356788999999999999999998    78999999999999999974

>PHA02639 EEV host range protein; Provisional

Probab=100.00  E-value=5.6e-36  Score=246.04  Aligned_cols=183  Identities=26%  Similarity=0.539  Sum_probs=160.8

Q ss_pred             eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCC---CeeeCCCCceeccceeeeecccccc
Q psy14531         19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN---GSWSGAIPECNAFFFFFFFFFFNPV   94 (222)
Q Consensus        19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~---g~W~~~~p~C~~~~~~~~~~~~~~~   94 (222)
                      .++.+.|+.|+. +||.+......|.+|+.|.|+|++||.|.|...++|+.+   |+|+++.|.|+.            +
T Consensus        16 ~~k~i~C~~P~~i~NG~v~~~~~~y~~G~~V~Y~Cn~GY~L~G~~~~~C~~d~~nG~WS~~~P~C~~------------~   83 (295)
T PHA02639         16 GVKSIYCDKPDDISNGFITELMEKYEIGKLIEYTCNTDYALIGDRFRTCIKDKNNAIWSNKAPFCML------------K   83 (295)
T ss_pred             CccccCCcCCCCCCCCEEeccCCcccCCCEEEEEeCCCCEECCCCeEEEeCCCCCCEECCCCCEEee------------c
Confidence            356788999987 999988666789999999999999999999999999864   699999999998            8


Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCC----CCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEe
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACND----RHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKII  169 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~----gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~  169 (222)
                      .|+.|+.+.||.+..  ....|.+|++++|+|+.    ||.+.|...++|+.+|+|++..|.|+ +.|+.| .+.||.+.
T Consensus        84 ~C~~Pp~~~nG~i~~--~~~~y~~G~~V~y~C~~g~~~gY~L~G~~~~~C~~dG~WS~~~P~C~~i~C~~P-~i~nG~v~  160 (295)
T PHA02639         84 ECNDPPSIINGKIYN--KREMYKVGDEIYYVCNEHKGVQYSLVGNEKITCIQDKSWKPDPPICKMINCRFP-ALQNGYIN  160 (295)
T ss_pred             cCcCCCCCCCcEEec--CCCceECCCEEEEEeCCCCCCceEECCCCeEEECCCCeECCCCCeeeeEEeCCC-CCCCCceE
Confidence            999999999998863  35678999999999999    59999999999999999999899999 799977 46777654


Q ss_pred             c--CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        170 P--LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       170 ~--~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      .  ....|..|+.|+|+|++||.+.|+    ..++|+.+|+|++++|+|+...
T Consensus       161 ~~~~~~~~~yg~~V~fsC~~GY~L~Gs----~~~tC~~nG~Ws~~~P~C~~~~  209 (295)
T PHA02639        161 GIPSNKKFYYKTRVGFSCKSGFDLVGE----KYSTCNINATWFPSIPTCVRNK  209 (295)
T ss_pred             cccCCCceecCCEEEEEcCCCCeEcCC----CcEEECCCCeECCCCCeEeccC
Confidence            2  234566799999999999999998    8899999999999999998754

>PHA02927 secreted complement-binding protein; Provisional

Probab=100.00  E-value=1.7e-32  Score=224.21  Aligned_cols=178  Identities=28%  Similarity=0.558  Sum_probs=155.4

Q ss_pred             eeEEeeCCCCcc-CCCeEEe-----ccCCcccccEEEEEcCCCCeEe--CCCceEeCCCCeeeCCCCceeccceeeeecc
Q psy14531         19 TCQQIICPKIVV-ENPYLTL-----VEQNNTYRGHAIFQCSWGYQLK--GPPDIVCQKNGSWSGAIPECNAFFFFFFFFF   90 (222)
Q Consensus        19 ~C~~~~C~~p~~-~ng~~~~-----~~~~~~~g~~~~~~C~~gy~l~--G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~   90 (222)
                      .|.++.|+.|.. .|+.+..     ....|.+|++|+|+|++||.+.  |...++|+.+| |+ ..|.|+.         
T Consensus        15 ~c~~~~c~~~~~~~~~~~~~~~~~~~~~~y~~g~~v~y~C~~Gy~~~~~g~~~~~C~~~g-Ws-~~p~C~~---------   83 (263)
T PHA02927         15 GCVLSCCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTG-WT-LFNQCIK---------   83 (263)
T ss_pred             HHHhccCCCCCcccceeeccccccccCceeCCCCEEEEEeCCCceecCCCccEEEecCCC-CC-CCCcEEe---------
Confidence            477888999988 8888763     2346889999999999999974  78889999888 99 4799998         


Q ss_pred             cccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC----eeeCCCCcee-ecCCCCCCCCC
Q psy14531         91 FNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG----RWSRAPPRCK-ARCEYPGEPQN  165 (222)
Q Consensus        91 ~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g----~Ws~~~p~C~-~~C~~p~~~~~  165 (222)
                         +.|+.|+.++||.+..    ..+.+|++|+|+|+.||.|+|...++|+.+|    +|++..|.|+ +.|+.|+.+.|
T Consensus        84 ---~~C~~p~~i~NG~~~~----~~~~~G~~v~y~C~~Gy~l~G~~~~~C~~~~~g~~~Ws~~~P~C~~~~C~~P~~~~n  156 (263)
T PHA02927         84 ---RRCPSPRDIDNGQLDI----GGVDFGSSITYSCNSGYQLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISN  156 (263)
T ss_pred             ---CCCcCCCCCCCCEEeC----CCccCCCEEEEECCCCCEEcCCCeeEEEeCCCCcceECCCCCccccccCCCCCCCCC
Confidence               8999999999999863    3467899999999999999999999998753    8999899999 79999999999


Q ss_pred             eEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        166 GKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       166 g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      |.+...+..|..|+.|+|.|++||.+.|+    ..++|. +|+|+. +|.|+++.
T Consensus       157 G~~~~~~~~y~~g~~v~y~C~~Gy~l~G~----~~~~C~-~G~Ws~-~P~C~~v~  205 (263)
T PHA02927        157 GRHNGYEDFYTDGSVVTYSCNSGYSLIGN----SGVLCS-GGEWSD-PPTCQIVK  205 (263)
T ss_pred             cEEcCCcccccCCCEEEEECCCCCEECCC----CeeEEC-CCccCC-CCeEeEeE
Confidence            99877666788899999999999999998    789997 899997 69998653

>PHA02954 EEV membrane glycoprotein; Provisional

Probab=99.98  E-value=2.6e-31  Score=219.57  Aligned_cols=181  Identities=22%  Similarity=0.507  Sum_probs=149.9

Q ss_pred             ceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCC---CCeeeCCCCce
Q psy14531          4 PVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK---NGSWSGAIPEC   79 (222)
Q Consensus         4 ~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~---~g~W~~~~p~C   79 (222)
                      .++|.. ++|+...| |+ +.|..|+. .++..   ...|.+|+.|+|+|++||.     .++|+.   ++.|+. .|.|
T Consensus        58 ~itC~~-~~WS~~~p-C~-k~C~~p~~~~~~~~---~~~y~~G~~V~ysC~~Gy~-----~~~C~~~g~~~~WS~-~ptC  125 (317)
T PHA02954         58 NAVCET-DKWKYENP-CK-KMCTVSDYVSELYD---KPLYEVNSTITLICKDETK-----YFRCEEKNGNTSWND-TVTC  125 (317)
T ss_pred             CeEECC-CcccCCCC-CC-CcCCCCcccccccc---CCCccCCCEEEEEECCCCc-----EEEeCCCCCCCccCC-CCee
Confidence            478855 47998877 97 67998876 55433   2568899999999999995     578975   567996 5799


Q ss_pred             eccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecCCC
Q psy14531         80 NAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEY  159 (222)
Q Consensus        80 ~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C~~  159 (222)
                      +.            +.|++|. +.||.+..  ....|.+|+.|+|+|+.||.|.|+..++|+++ .|+ ..|.|+..|+.
T Consensus       126 ~~------------i~C~pP~-i~NG~~~~--~~~~Y~yGd~VtysC~~GY~L~Gs~~i~C~~~-~Ws-~~P~C~~~C~~  188 (317)
T PHA02954        126 PN------------AECQPLQ-LEHGSCQP--VKEKYSFGEHITINCDVGYEVIGASYISCTAN-SWN-VIPSCQQKCDI  188 (317)
T ss_pred             cc------------eECCCCC-CCCCeecc--CCCceeCCCEEEEEcCCCCEECcCCeeEECCC-cCC-CCCccccccCC
Confidence            99            8997654 67998752  35679999999999999999999999999977 698 47999988986


Q ss_pred             CCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCcC
Q psy14531        160 PGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTD  221 (222)
Q Consensus       160 p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~~  221 (222)
                      | .+.||.+..  ..|.+|+.|+|.|++||.+.|+    ..++|. +|+|++++|.|....+
T Consensus       189 P-~i~NG~~sg--~~y~~Gd~Vtf~C~~Gy~L~Gs----~~itC~-~g~Ws~~~P~C~~~~~  242 (317)
T PHA02954        189 P-SLSNGLISG--STFSIGGVIHLSCKSGFTLTGS----PSSTCI-DGKWNPVLPICVRSNE  242 (317)
T ss_pred             C-CCCCCeEcC--CCcccCCEEEEECCCCCeECCC----cceEEC-CCeEeCCCCceeCCCC
Confidence            5 678998765  3577899999999999999998    889997 9999999999988654

>PHA02831 EEV host range protein; Provisional

Probab=99.97  E-value=4e-31  Score=213.26  Aligned_cols=159  Identities=26%  Similarity=0.585  Sum_probs=137.8

Q ss_pred             ccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcC
Q psy14531         38 VEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYR  117 (222)
Q Consensus        38 ~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~  117 (222)
                      .+..|.+|++|+|+|++||.+   ..++|. +|+|++. |.|...           +.|+.|+.+.||.+..  ....|.
T Consensus        36 ~~~~Y~~Gs~V~Y~C~~GY~~---~~itC~-dG~WS~~-P~C~~~-----------~~C~~Pp~i~NG~i~~--~~~~Y~   97 (268)
T PHA02831         36 ENKVYEENENLEYKCNNNFDK---VFVTCN-NGSWSTK-NMCIGK-----------RNCKDPVTILNGYIKN--KKDQYS   97 (268)
T ss_pred             cCcccCCCCEEEEECCCCCEe---eeEEeC-CCccCCC-Cccccc-----------ccCcCCCCCCCCEEec--cCCcee
Confidence            345789999999999999985   478996 9999964 777531           5899999999999863  356689


Q ss_pred             CCCEEEEEcC----CCCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeec
Q psy14531        118 VGAILQFACN----DRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKP  192 (222)
Q Consensus       118 ~g~~~~~~C~----~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~  192 (222)
                      +|+.|+|+|+    .||.|.|.+.++|. +|+|++..|.|+ +.|+.| .+.||.+...+..|.+|+.|+|.|++||.+.
T Consensus        98 ~Gd~VtYsC~~g~~~GY~LvG~s~~tC~-dG~WS~~~P~C~~i~C~~P-~i~NG~i~~~~~~y~~G~~Vty~C~~GY~L~  175 (268)
T PHA02831         98 FGDSVTYACKVNKLEKYSIVGNETVKCI-NKQWVPKYPVCKLIRCKYP-ALQNGFLNVFEKKFYYGDIVNFKCKKGFILL  175 (268)
T ss_pred             CCCEEEEECCCCCCCCeeEcCCceeEeC-CCcCCCCCCeeeEeeCCCC-CCCCCccccCCCceecCCEEEEEcCCCCEEC
Confidence            9999999999    69999999999996 999999899999 789988 4779987765567888999999999999999


Q ss_pred             cCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        193 LDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       193 ~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      |+    ..++|+.+|+|++++|+|+...
T Consensus       176 Gs----s~~tC~~nG~Wsp~~P~C~~~~  199 (268)
T PHA02831        176 GS----SVSTCDINSIWYPGIPKCVKDK  199 (268)
T ss_pred             CC----ccEEECCCCeECCCCCCccCcc
Confidence            98    7899999999999999998763

>PHA02639 EEV host range protein; Provisional

Probab=99.95  E-value=2e-27  Score=195.52  Aligned_cols=144  Identities=22%  Similarity=0.429  Sum_probs=125.6

Q ss_pred             CceEecc---CCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCC----CCeEeCCCceEeCCCCeeeC
Q psy14531          3 HPVFRVS---QGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSW----GYQLKGPPDIVCQKNGSWSG   74 (222)
Q Consensus         3 ~~~~c~~---~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~----gy~l~G~~~~~C~~~g~W~~   74 (222)
                      ..++|+.   +|.|++..|.|+.+.|+.|+. +||.+......|.+|+.++|+|+.    ||.|.|...++|+.+|+|++
T Consensus        60 ~~~~C~~d~~nG~WS~~~P~C~~~~C~~Pp~~~nG~i~~~~~~y~~G~~V~y~C~~g~~~gY~L~G~~~~~C~~dG~WS~  139 (295)
T PHA02639         60 RFRTCIKDKNNAIWSNKAPFCMLKECNDPPSIINGKIYNKREMYKVGDEIYYVCNEHKGVQYSLVGNEKITCIQDKSWKP  139 (295)
T ss_pred             CeEEEeCCCCCCEECCCCCEEeeccCcCCCCCCCcEEecCCCceECCCEEEEEeCCCCCCceEECCCCeEEECCCCeECC
Confidence            4578985   469999999999999999888 999988766778999999999999    59999999999999999999


Q ss_pred             CCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee
Q psy14531         75 AIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        75 ~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~  154 (222)
                      +.|.|+.            +.|+.|. +.||.+........+.+|++|+|+|+.||.|.|+..++|+.+|+|+++.|.|+
T Consensus       140 ~~P~C~~------------i~C~~P~-i~nG~v~~~~~~~~~~yg~~V~fsC~~GY~L~Gs~~~tC~~nG~Ws~~~P~C~  206 (295)
T PHA02639        140 DPPICKM------------INCRFPA-LQNGYINGIPSNKKFYYKTRVGFSCKSGFDLVGEKYSTCNINATWFPSIPTCV  206 (295)
T ss_pred             CCCeeee------------EEeCCCC-CCCCceEcccCCCceecCCEEEEEcCCCCeEcCCCcEEECCCCeECCCCCeEe
Confidence            9999999            8999775 46887653333466889999999999999999999999999999999999998


Q ss_pred             ecCCC
Q psy14531        155 ARCEY  159 (222)
Q Consensus       155 ~~C~~  159 (222)
                      ...+.
T Consensus       207 ~~~~~  211 (295)
T PHA02639        207 RNKPI  211 (295)
T ss_pred             ccCCc
Confidence            65543

>PHA02831 EEV host range protein; Provisional

Probab=99.95  E-value=2.5e-27  Score=191.23  Aligned_cols=145  Identities=24%  Similarity=0.498  Sum_probs=123.5

Q ss_pred             ceEeccCCccCCCCCeeE-EeeCCCCcc-CCCeEEeccCCcccccEEEEEcC----CCCeEeCCCceEeCCCCeeeCCCC
Q psy14531          4 PVFRVSQGQWSGEVPTCQ-QIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCS----WGYQLKGPPDIVCQKNGSWSGAIP   77 (222)
Q Consensus         4 ~~~c~~~g~Ws~~~p~C~-~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~----~gy~l~G~~~~~C~~~g~W~~~~p   77 (222)
                      .++| .+|.|+.. |.|. .+.|+.|+. +||.+......|.+|+.|+|+|+    .||.|.|...++|. +|+|+++.|
T Consensus        58 ~itC-~dG~WS~~-P~C~~~~~C~~Pp~i~NG~i~~~~~~Y~~Gd~VtYsC~~g~~~GY~LvG~s~~tC~-dG~WS~~~P  134 (268)
T PHA02831         58 FVTC-NNGSWSTK-NMCIGKRNCKDPVTILNGYIKNKKDQYSFGDSVTYACKVNKLEKYSIVGNETVKCI-NKQWVPKYP  134 (268)
T ss_pred             eEEe-CCCccCCC-CcccccccCcCCCCCCCCEEeccCCceeCCCEEEEECCCCCCCCeeEcCCceeEeC-CCcCCCCCC
Confidence            4556 69999975 6776 467999887 99999876677999999999999    69999999999996 999999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ec
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-AR  156 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~  156 (222)
                      .|+.            +.|+.|. +.||.+..  ....|.+|++|+|+|+.||.|.|+..++|+.+|+|++..|.|+ ..
T Consensus       135 ~C~~------------i~C~~P~-i~NG~i~~--~~~~y~~G~~Vty~C~~GY~L~Gss~~tC~~nG~Wsp~~P~C~~~~  199 (268)
T PHA02831        135 VCKL------------IRCKYPA-LQNGFLNV--FEKKFYYGDIVNFKCKKGFILLGSSVSTCDINSIWYPGIPKCVKDK  199 (268)
T ss_pred             eeeE------------eeCCCCC-CCCCcccc--CCCceecCCEEEEEcCCCCEECCCccEEECCCCeECCCCCCccCcc
Confidence            9999            8999875 67998652  3567899999999999999999999999999999999999999 56


Q ss_pred             CCCCCCCCCeE
Q psy14531        157 CEYPGEPQNGK  167 (222)
Q Consensus       157 C~~p~~~~~g~  167 (222)
                      |..+ ..++..
T Consensus       200 ~~~~-~~~~~~  209 (268)
T PHA02831        200 VHNE-IQPNYL  209 (268)
T ss_pred             cCCC-CCccce
Confidence            7755 344444

>PHA02954 EEV membrane glycoprotein; Provisional

Probab=99.95  E-value=5.7e-27  Score=193.80  Aligned_cols=168  Identities=26%  Similarity=0.538  Sum_probs=138.1

Q ss_pred             CeeEEeeCCCCccCCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCC
Q psy14531         18 PTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCP   97 (222)
Q Consensus        18 p~C~~~~C~~p~~~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~   97 (222)
                      +.|+.+.|+.|..+||.+......|.+|+.|+|+|+.||.+.+. .++|+.+ .|+.+.| |..             .|.
T Consensus        14 ~~~v~~~C~~P~~~ng~~~~~~~~Y~~gd~V~y~C~~GY~l~~~-~itC~~~-~WS~~~p-C~k-------------~C~   77 (317)
T PHA02954         14 PAVVYSTCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYYSLDP-NAVCETD-KWKYENP-CKK-------------MCT   77 (317)
T ss_pred             HHHHhCcCCCCCCCcCEEcCCcccccCCCEEEEEcCCCcccCCC-CeEECCC-cccCCCC-CCC-------------cCC
Confidence            56778899998879999876546788899999999999998875 6999865 5998777 976             798


Q ss_pred             CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCc---CCeeeCCCCcee-ecCCCCCCCCCeEEecCcc
Q psy14531         98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE---TGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKF  173 (222)
Q Consensus        98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~---~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~  173 (222)
                      .|..+.++..     ...|.+|++|+|+|+.||.     .++|..   ++.|+. .|.|+ +.|..| .+.||.+...+.
T Consensus        78 ~p~~~~~~~~-----~~~y~~G~~V~ysC~~Gy~-----~~~C~~~g~~~~WS~-~ptC~~i~C~pP-~i~NG~~~~~~~  145 (317)
T PHA02954         78 VSDYVSELYD-----KPLYEVNSTITLICKDETK-----YFRCEEKNGNTSWND-TVTCPNAECQPL-QLEHGSCQPVKE  145 (317)
T ss_pred             CCcccccccc-----CCCccCCCEEEEEECCCCc-----EEEeCCCCCCCccCC-CCeecceECCCC-CCCCCeeccCCC
Confidence            8766655432     3568999999999999984     578975   578997 67999 889755 578999876666


Q ss_pred             ccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       174 ~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      .|.+|+.|+|.|++||.+.|+    ..++|+.+ .|+ ++|.|...
T Consensus       146 ~Y~yGd~VtysC~~GY~L~Gs----~~i~C~~~-~Ws-~~P~C~~~  185 (317)
T PHA02954        146 KYSFGEHITINCDVGYEVIGA----SYISCTAN-SWN-VIPSCQQK  185 (317)
T ss_pred             ceeCCCEEEEEcCCCCEECcC----CeeEECCC-cCC-CCCccccc
Confidence            788999999999999999998    89999966 698 57999753

>PHA02817 EEV Host range protein; Provisional

Probab=99.93  E-value=5e-25  Score=173.47  Aligned_cols=125  Identities=25%  Similarity=0.554  Sum_probs=111.1

Q ss_pred             CeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCC-----CeEeCCCceEeCCCCeeeCCCCceeccceeeeeccc
Q psy14531         18 PTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWG-----YQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFF   91 (222)
Q Consensus        18 p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~g-----y~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~   91 (222)
                      -.|+.++|+.|+. +||.+......|.+|+.|+|+|++|     |.|.|...++|+.+|+|+++.|.|+.          
T Consensus        17 ~~C~~~~C~~PP~i~NG~i~~~~~~Y~~Gd~Vty~C~~G~~~~gY~L~G~~~i~C~~dG~Ws~~~P~C~~----------   86 (225)
T PHA02817         17 SLCDLNKCCYPPSIKNGYIYNKKTEYNIGSNVTFFCGNNTRGVRYTLVGEKNIICEKDGKWNKEFPVCKI----------   86 (225)
T ss_pred             CEecCcCCCCCCCCCCCEEecCCCceeCCCEEEEEeCCCCCCCCEEECCCCeEEECCCCcCCCCCCeeee----------
Confidence            4698899999888 9999876667789999999999997     89999999999999999998999998          


Q ss_pred             ccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceee
Q psy14531         92 NPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA  155 (222)
Q Consensus        92 ~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~  155 (222)
                        +.|+.|. ++||.+........|.+|++|+|.|++||.|.|...++|+++|+|++..|.|..
T Consensus        87 --v~C~~P~-i~NG~v~~~~~~~~y~yg~~Vty~C~~Gy~L~G~~~~tC~~~G~WSp~~P~C~~  147 (225)
T PHA02817         87 --IRCRFPA-LQNGFVNGIPDSKKFYYESEVSFSCKPGFVLIGTKYSVCGINSSWIPKVPICSR  147 (225)
T ss_pred             --eECCCCC-CcCceeEccccCCceEcCCEEEEEcCCCCEEcCCCceEECCCCeECCCCCEeec
Confidence              8999876 568877533335678899999999999999999999999999999998999984

>PHA02817 EEV Host range protein; Provisional

Probab=99.91  E-value=5.6e-24  Score=167.56  Aligned_cols=120  Identities=27%  Similarity=0.625  Sum_probs=105.4

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC-----CEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeE
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR-----HHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGK  167 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g-----y~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~  167 (222)
                      +.|+.|+.+.||.+..  ....|.+|++|+|+|..|     |.+.|...++|+.+|+|++..|.|+ +.|+.|. +.||.
T Consensus        22 ~~C~~PP~i~NG~i~~--~~~~Y~~Gd~Vty~C~~G~~~~gY~L~G~~~i~C~~dG~Ws~~~P~C~~v~C~~P~-i~NG~   98 (225)
T PHA02817         22 NKCCYPPSIKNGYIYN--KKTEYNIGSNVTFFCGNNTRGVRYTLVGEKNIICEKDGKWNKEFPVCKIIRCRFPA-LQNGF   98 (225)
T ss_pred             cCCCCCCCCCCCEEec--CCCceeCCCEEEEEeCCCCCCCCEEECCCCeEEECCCCcCCCCCCeeeeeECCCCC-CcCce
Confidence            7999999999999753  356789999999999997     8999999999999999998899999 7999885 67887


Q ss_pred             Ee--cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        168 II--PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       168 ~~--~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      +.  .....|..|+.|+|.|++||.+.|.    ..++|+.+|+|++++|+|++..
T Consensus        99 v~~~~~~~~y~yg~~Vty~C~~Gy~L~G~----~~~tC~~~G~WSp~~P~C~~~~  149 (225)
T PHA02817         99 VNGIPDSKKFYYESEVSFSCKPGFVLIGT----KYSVCGINSSWIPKVPICSRDN  149 (225)
T ss_pred             eEccccCCceEcCCEEEEEcCCCCEEcCC----CceEECCCCeECCCCCEeecCC
Confidence            65  3345677899999999999999998    7899999999999999998643

>cd00033 CCP Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

Probab=99.28  E-value=1.1e-11  Score=77.37  Aligned_cols=56  Identities=36%  Similarity=0.746  Sum_probs=50.7

Q ss_pred             CCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee
Q psy14531         25 CPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN   80 (222)
Q Consensus        25 C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~   80 (222)
                      |+.|+. +||.+......|.+|+.|+|+|+.||.|.|...++|+.+|+|+...|.|.
T Consensus         1 C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~Gy~~~g~~~~~C~~~g~W~~~~p~C~   57 (57)
T cd00033           1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGSSTITCTENGGWSPPPPTCE   57 (57)
T ss_pred             CcCCCCCCCcEEecCCCcccCCCEEEEECCCCCeEeCCCeeEECCCCeECCCCcccC
Confidence            777877 89999876678999999999999999999999999999999999888884

SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.

>smart00032 CCP Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

Probab=99.27  E-value=1.5e-11  Score=76.69  Aligned_cols=55  Identities=31%  Similarity=0.668  Sum_probs=49.1

Q ss_pred             CCCCcc-CCCeEEecc-CCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCce
Q psy14531         25 CPKIVV-ENPYLTLVE-QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC   79 (222)
Q Consensus        25 C~~p~~-~ng~~~~~~-~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C   79 (222)
                      |+.|+. .||.+.... ..|.+|+.++|.|+.||.|.|...++|+.+|+|+...|.|
T Consensus         1 C~~p~~~~~g~~~~~~~~~~~~g~~~~~~C~~Gy~l~g~~~~~C~~~g~Ws~~~p~C   57 (57)
T smart00032        1 CPPPPDIENGTITSSNKGTYSVGDTVTYSCNPGYTLIGSSTITCLEDGTWSPPAPTC   57 (57)
T ss_pred             CcCCCCCCCCEEecCCCCeecCCCEEEEEcCCCCEEcCCCeeEECCCCEECCCCCcC
Confidence            677776 899988764 6789999999999999999999999999999999888877

The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.

>PF00084 Sushi: Sushi domain (SCR repeat); InterPro: IPR000436 Sushi domains are also known as Complement control protein (CCP) modules, or short consensus repeats (SCR), exist in a wide variety of complement and adhesion proteins

Probab=99.26  E-value=4.7e-12  Score=78.92  Aligned_cols=55  Identities=35%  Similarity=0.756  Sum_probs=48.8

Q ss_pred             CCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCce
Q psy14531         25 CPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC   79 (222)
Q Consensus        25 C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C   79 (222)
                      |+.|+. +|+.+......|.+|+.|+|+|+.||.+.|...++|+.+|+|+.+.|.|
T Consensus         1 C~~P~~~~~~~~~~~~~~~~~g~~~~~~C~~Gy~~~g~~~~~C~~~g~W~~~~p~C   56 (56)
T PF00084_consen    1 CPPPPPIPNGSISCTNNPYSYGSTVTFSCNPGYELSGSSTITCQSNGQWSPPPPTC   56 (56)
T ss_dssp             EESESCBTTEEEESSSSSEETTEEEEEEESTTEEEESSSEEEEETTSEESSTTSEE
T ss_pred             CcCCCCCCCcEEecCCCCccCCCEEEEcCCCCCEecCCCEEEECCCCEECCCCCCC
Confidence            566766 8887776667899999999999999999999999999999999988887

The structure is known for this domain, it is based on a beta-sandwich arrangement; one face made up of three beta-strands hydrogen-bonded to form a triple-stranded region at its centre and the other face formed from two separate beta-strands []. CD21 (also called C3d receptor, CR2, Epstein Barr virus receptor or EBV-R) is the receptor for EBV and for C3d, C3dg and iC3b. Complement components may activate B cells through CD21. CD21 is part of a large signal-transduction complex that also involves CD19, CD81, and Leu13. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Complement decay-accelerating factor (Antigen CD55) belongs to the Cromer blood group system and is associated with Cr(a), Dr(a), Es(a), Tc(a/b/c), Wd(a), WES(a/b), IFC and UMC antigens. Complement receptor type 1 (C3b/C4b receptor) (Antigen CD35) belongs to the Knops blood group system and is associated with Kn(a/b), McC(a), Sl(a) and Yk(a) antigens. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; PDB: 1HFH_A 1HFI_A 1E5G_A 2UWN_A 2V8E_A 2XWB_H 3HS0_I 2OK5_A 2XWJ_J 3HRZ_D ....

>cd00033 CCP Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

Probab=99.26  E-value=1.5e-11  Score=76.73  Aligned_cols=57  Identities=33%  Similarity=0.652  Sum_probs=51.2

Q ss_pred             CCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       157 C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      |+.|+.+.||.+......|..|+.|+|.|++||.+.|.    ..++|+.+|+|++..|.|.
T Consensus         1 C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~Gy~~~g~----~~~~C~~~g~W~~~~p~C~   57 (57)
T cd00033           1 CPPPPVPENGTVTGSKGSYSYGSTVTYSCNEGYTLVGS----STITCTENGGWSPPPPTCE   57 (57)
T ss_pred             CcCCCCCCCcEEecCCCcccCCCEEEEECCCCCeEeCC----CeeEECCCCeECCCCcccC
Confidence            77888888999887666788999999999999999887    7899999999999989984

SUSHI repeats (short complement-like repeat, SCR) are abundant in complement control proteins. The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. Typically, 2 to 4 modules contribute to a binding site, implying that the orientation of the modules to each other is critical for function.

>smart00032 CCP Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

Probab=99.24  E-value=3.3e-11  Score=75.06  Aligned_cols=57  Identities=39%  Similarity=0.846  Sum_probs=49.7

Q ss_pred             CCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCce
Q psy14531         96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC  153 (222)
Q Consensus        96 C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C  153 (222)
                      |+.|+.+.||.+.... ...|.+|++++|.|+.||.+.|...++|+.+|+|+...|.|
T Consensus         1 C~~p~~~~~g~~~~~~-~~~~~~g~~~~~~C~~Gy~l~g~~~~~C~~~g~Ws~~~p~C   57 (57)
T smart00032        1 CPPPPDIENGTITSSN-KGTYSVGDTVTYSCNPGYTLIGSSTITCLEDGTWSPPAPTC   57 (57)
T ss_pred             CcCCCCCCCCEEecCC-CCeecCCCEEEEEcCCCCEEcCCCeeEECCCCEECCCCCcC
Confidence            6777878899887542 36799999999999999999999999999999999977877

The complement control protein (CCP) modules (also known as short consensus repeats SCRs or SUSHI repeats) contain approximately 60 amino acid residues and have been identified in several proteins of the complement system. A missense mutation in seventh CCP domain causes deficiency of the b subunit of factor XIII.

>PF00084 Sushi: Sushi domain (SCR repeat); InterPro: IPR000436 Sushi domains are also known as Complement control protein (CCP) modules, or short consensus repeats (SCR), exist in a wide variety of complement and adhesion proteins

Probab=99.22  E-value=7.4e-12  Score=78.02  Aligned_cols=56  Identities=36%  Similarity=0.610  Sum_probs=49.3

Q ss_pred             CCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCce
Q psy14531        157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC  216 (222)
Q Consensus       157 C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C  216 (222)
                      |..|+.+.++.+......|.+|+.|+|.|++||++.|.    ..++|+.+|+|+++.|.|
T Consensus         1 C~~P~~~~~~~~~~~~~~~~~g~~~~~~C~~Gy~~~g~----~~~~C~~~g~W~~~~p~C   56 (56)
T PF00084_consen    1 CPPPPPIPNGSISCTNNPYSYGSTVTFSCNPGYELSGS----STITCQSNGQWSPPPPTC   56 (56)
T ss_dssp             EESESCBTTEEEESSSSSEETTEEEEEEESTTEEEESS----SEEEEETTSEESSTTSEE
T ss_pred             CcCCCCCCCcEEecCCCCccCCCEEEEcCCCCCEecCC----CEEEECCCCEECCCCCCC
Confidence            66777888997766557888999999999999999888    899998899999998987

The structure is known for this domain, it is based on a beta-sandwich arrangement; one face made up of three beta-strands hydrogen-bonded to form a triple-stranded region at its centre and the other face formed from two separate beta-strands []. CD21 (also called C3d receptor, CR2, Epstein Barr virus receptor or EBV-R) is the receptor for EBV and for C3d, C3dg and iC3b. Complement components may activate B cells through CD21. CD21 is part of a large signal-transduction complex that also involves CD19, CD81, and Leu13. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Complement decay-accelerating factor (Antigen CD55) belongs to the Cromer blood group system and is associated with Cr(a), Dr(a), Es(a), Tc(a/b/c), Wd(a), WES(a/b), IFC and UMC antigens. Complement receptor type 1 (C3b/C4b receptor) (Antigen CD35) belongs to the Knops blood group system and is associated with Kn(a/b), McC(a), Sl(a) and Yk(a) antigens. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; PDB: 1HFH_A 1HFI_A 1E5G_A 2UWN_A 2V8E_A 2XWB_H 3HS0_I 2OK5_A 2XWJ_J 3HRZ_D ....

>PF14704 DERM: Dermatopontin

Probab=92.60  E-value=1.3  Score=33.31  Aligned_cols=137  Identities=20%  Similarity=0.323  Sum_probs=76.9

Q ss_pred             ccccEEEEEcCCCCeEeCCCceEeC--CCCeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCC
Q psy14531         43 TYRGHAIFQCSWGYQLKGPPDIVCQ--KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGA  120 (222)
Q Consensus        43 ~~g~~~~~~C~~gy~l~G~~~~~C~--~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~  120 (222)
                      .++..+.|+|..|-.|.+.......  +|..|.   -.|..            +.=    .+..+.-...  ...-.++.
T Consensus         2 ~~d~~f~f~Cp~gq~i~~v~S~~~n~~eDR~W~---F~C~~------------~~~----~~~~~~~~~~--~~vN~~d~   60 (152)
T PF14704_consen    2 NYDQPFSFQCPSGQGISGVRSYHSNNREDRRWS---FGCSP------------VGS----GPTQGSSCWW--SYVNNYDQ   60 (152)
T ss_pred             CCCCCEEEECCCCCEEEEEEEEeCCCCCcccEE---EEEEe------------CCC----CCCccceEcc--hhhhccCC
Confidence            4567789999999999988888777  688898   45665            211    1111111111  13335688


Q ss_pred             EEEEEcCCCCEEcCCCeEEeC--cCCeeeCCCCceeecCCCCCCCCCeEE-ec-CccccCCCCeEEEEcCCCCeeccCCC
Q psy14531        121 ILQFACNDRHHLLGEETIVCT--ETGRWSRAPPRCKARCEYPGEPQNGKI-IP-LKFFYDPGDHIQVTCNDGYVKPLDIT  196 (222)
Q Consensus       121 ~~~~~C~~gy~~~g~~~~~C~--~~g~Ws~~~p~C~~~C~~p~~~~~g~~-~~-~~~~~~~g~~v~y~C~~gy~~~~~~~  196 (222)
                      .+.|+|+.++.|.|-....=.  +|-.|.   ..|   |........... .. ....|  +..+.|.=..++.+.|..+
T Consensus        61 ~~~~tCp~n~~i~G~~S~h~n~~eDR~w~---f~C---~~~~~~~~~~C~~~t~~~N~~--d~~~~~~~~~~~~i~G~~S  132 (152)
T PF14704_consen   61 PFNFTCPSNYYITGMQSYHDNSKEDRRWQ---FQC---CRINGATLYNCYWTTGYVNNY--DGPLDFTVPSGYVITGVSS  132 (152)
T ss_pred             cEEEECCCCCEEEEEEEEecCCcccCceE---EEE---EecCCceeecceecccccccC--CCcEEEEcCCCcEEEeEee
Confidence            999999999998875443321  345563   245   222222111111 11 11122  6667787778888877632


Q ss_pred             CCCcceeCCCCccc
Q psy14531        197 PTSGPYCQSDGTWS  210 (222)
Q Consensus       197 ~~~~~~C~~~G~W~  210 (222)
                      .  --.-.+|..|.
T Consensus       133 ~--~~~~~~DR~wk  144 (152)
T PF14704_consen  133 Y--HDNSNEDRRWK  144 (152)
T ss_pred             e--cCCCCcCceEE
Confidence            1  11224566775

>smart00008 HormR Domain present in hormone receptors

Probab=88.61  E-value=0.46  Score=30.64  Aligned_cols=33  Identities=27%  Similarity=0.556  Sum_probs=26.6

Q ss_pred             cCCCCEEEEEcCCCCEEcCC---CeEEeCcCCeeeC
Q psy14531        116 YRVGAILQFACNDRHHLLGE---ETIVCTETGRWSR  148 (222)
Q Consensus       116 ~~~g~~~~~~C~~gy~~~g~---~~~~C~~~g~Ws~  148 (222)
                      -..|+++...|..++.....   ..+.|..+|.|+.
T Consensus        18 t~~G~~~~~~CP~~~~g~~~~~~a~R~C~~~G~W~~   53 (70)
T smart00008       18 TPAGQLVEVPCPDYFSGFSYKTGASRNCTENGGWSP   53 (70)
T ss_pred             CCCCCEEEecCCCcccCcCCCCCEEEEcCCCCCCcc
Confidence            36699999999998765422   7899999999986

>PF02793 HRM: Hormone receptor domain; InterPro: IPR001879 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=86.87  E-value=0.47  Score=30.08  Aligned_cols=33  Identities=27%  Similarity=0.477  Sum_probs=26.5

Q ss_pred             CCCCEEEEEcCCCCEE-----cCCCeEEeCcCCeeeCC
Q psy14531        117 RVGAILQFACNDRHHL-----LGEETIVCTETGRWSRA  149 (222)
Q Consensus       117 ~~g~~~~~~C~~gy~~-----~g~~~~~C~~~g~Ws~~  149 (222)
                      ..|+++...|..++..     .|..++.|..+|+|...
T Consensus        18 ~~G~~a~~~CP~~~~~~~~~~~g~a~R~C~~nG~W~~~   55 (66)
T PF02793_consen   18 PAGETASQPCPSGFYGFGSDTSGNATRNCTENGTWEEH   55 (66)
T ss_dssp             ETTEEEEEECSTTSTCCTSSTTSEEEEEEETTSSBECS
T ss_pred             CCCCEEEeeCcCCccccccccceeEEEEcCCCCcCCCc
Confidence            5688999999998742     24578999999999873

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The secretin-like GPCRs include secretin [], calcitonin [], parathyroid hormone/parathyroid hormone-related peptides [] and vasoactive intestinal peptide [], all of which activate adenylyl cyclase and the phosphatidyl-inositol-calcium pathway. These receptors contain seven transmembrane regions, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins (however there is no significant sequence identity between these families, the secretin-like receptors thus bear their own unique '7TM' signature). Their N terminus is probably located on the extracellular side of the membrane and potentially glycosylated. This N-terminal region contains a long conserved region which allow the binding of large peptidic ligand such as glucagon, secretin, VIP and PACAP; this region contains five conserved cysteines residues which could be involved in disulphide bond. The C-terminal region of these receptor is probably cytoplasmic. Every receptor gene in this family is encoded on multiple exons, and several of these genes are alternatively spliced to yield functionally distinct products. This domain is found in the extracellular part of some of the secretin-like (family 2) GPCRs including the calcitonin receptor; corticotropin releasing factor receptor 1; diuretic hormone receptor; glucagon-like peptide 1 receptor; and parathyroid hormone peptide receptor.; GO: 0004930 G-protein coupled receptor activity, 0016020 membrane; PDB: 3EHT_A 3EHU_A 2L27_A 3EHS_A 4DLO_B 2QKH_A 3C5T_A 3C59_A 3IOL_A 3N7R_B ....

>smart00008 HormR Domain present in hormone receptors

Probab=84.77  E-value=1.2  Score=28.74  Aligned_cols=42  Identities=26%  Similarity=0.545  Sum_probs=29.1

Q ss_pred             CCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccC---CCCceee
Q psy14531        176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL---DIPHCTN  218 (222)
Q Consensus       176 ~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~---~~p~C~~  218 (222)
                      +.|+++...|..++........ ..+.|..+|.|..   ..-.|..
T Consensus        19 ~~G~~~~~~CP~~~~g~~~~~~-a~R~C~~~G~W~~~~~ny~~C~~   63 (70)
T smart00008       19 PAGQLVEVPCPDYFSGFSYKTG-ASRNCTENGGWSPPFPNYSNCTS   63 (70)
T ss_pred             CCCCEEEecCCCcccCcCCCCC-EEEEcCCCCCCccCCCCHhhccC
Confidence            4599999999887764332211 5799999999985   3344543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	222
2gsx_A	951	Complement Receptor Type 2 Length = 951		4e-14
2gsx_A	951	Complement Receptor Type 2 Length = 951		2e-04
2q7z_A	1931	Solution Structure Of The 30 Scr Domains Of Human C		9e-14
1c1z_A	326	Crystal Structure Of Human Beta-2-Glycoprotein-I (A		6e-12
1qub_A	319	Crystal Structure Of The Glycosylated Five-domain H		6e-12
2wii_C	277	Complement C3b In Complex With Factor H Domains 1-4		1e-10
3gau_A	1213	Solution Structure Of Human Complement Factor H In		1e-10
1haq_A	1213	Four Models Of Human Factor H Determined By Solutio		1e-10
2qfg_A	312	Solution Structure Of The N-Terminal Scr-15 FRAGMEN		2e-10
3o8e_B	252	Structure Of Extracelllar Portion Of Cd46 In Comple		1e-08
1ntl_A	551	Model Of Mouse Crry-Ig Determined By Solution Scatt		5e-08
3iyp_F	381	The Interaction Of Decay-Accelerating Factor With E		1e-07
3iyp_F	381	The Interaction Of Decay-Accelerating Factor With E		2e-06
1ojv_A	254	Decay Accelerating Factor (Cd55): The Structure Of		2e-07
1ojv_A	254	Decay Accelerating Factor (Cd55): The Structure Of		2e-06
2c8i_E	316	Complex Of Echovirus Type 12 With Domains 1, 2, 3 A		2e-07
2c8i_E	316	Complex Of Echovirus Type 12 With Domains 1, 2, 3 A		5e-05
2xrb_A	290	Structure Of The N-Terminal Four Domains Of The Com		2e-07
2ok5_A	752	Human Complement Factor B Length = 752		3e-07
2ok5_A	752	Human Complement Factor B Length = 752		6e-05
2xwb_F	732	Crystal Structure Of Complement C3b In Complex With		4e-07
2xwb_F	732	Crystal Structure Of Complement C3b In Complex With		7e-05
3hrz_D	741	Cobra Venom Factor (Cvf) In Complex With Human Fact		4e-07
3hrz_D	741	Cobra Venom Factor (Cvf) In Complex With Human Fact		7e-05
1h04_P	125	Human Cd55 Domains 3 & 4 Length = 125		5e-07
1ok3_A	254	Decay Accelerating Factor (cd55): The Structure Of		5e-07
1ok3_A	254	Decay Accelerating Factor (cd55): The Structure Of		3e-06
2rlq_A	129	Nmr Structure Of Ccp Modules 2-3 Of Complement Fact		7e-07
2rlq_A	129	Nmr Structure Of Ccp Modules 2-3 Of Complement Fact		6e-06
1h03_P	125	Human Cd55 Domains 3 & 4 Length = 125		9e-07
1h2p_P	125	Human Cd55 Domains 3 & 4 Length = 125		9e-07
1upn_E	129	Complex Of Echovirus Type 12 With Domains 3 And 4 O		9e-07
1ntj_A	320	Model Of Rat Crry Determined By Solution Scattering		2e-06
3erb_A	223	The Crystal Structure Of C2b, A Fragment Of Complem		2e-06
1e5g_A	120	Solution Structure Of Central Cp Module Pair Of A P		2e-06
1g40_A	244	Crystal Structure Of A Complement Protein That Regu		3e-06
1m11_R	243	Structural Model Of Human Decay-accelerating Factor		3e-06
1ckl_A	126	N-Terminal Two Domains Of Human Cd46 (Membrane Cofa		2e-05
1gkg_A	136	Structure Determination And Rational Mutagenesis Re		9e-05
1w2r_A	142	Solution Structure Of Cr2 Scr 1-2 By X-Ray Scatteri		9e-05
3oed_C	135	The Structure Of The Complex Between Complement Rec		9e-05
1ghq_B	134	Cr2-C3d Complex Structure Length = 134		1e-04
2qfh_A	333	Solution Structure Of The C-Terminal Scr-1620 FRAGM		1e-04
1ly2_A	130	Crystal Structure Of Unliganded Human Cd21 Scr1-Scr		2e-04
2a55_A	133	Solution Structure Of The Two N-Terminal Ccp Module		2e-04
1nwv_A	129	Solution Structure Of A Functionally Active Compone		2e-04
2aty_A	376	Complement Receptor Chimaeric Conjugate Cr2-Ig Leng		3e-04
1vvc_A	118	C-Terminal Half Of Vaccinia Virus Complement Contro		3e-04

>pdb|2GSX|A Chain A, Complement Receptor Type 2 Length = 951

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 11  GQWSGEVPTCQ----QIICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIV 65
           G WSG  P C+     + CP   ++    ++  +   TY    IF C +G+ LKG   I 
Sbjct: 313 GTWSGPAPRCELSTSAVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIR 372
Query: 66  CQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           C   G+W  + P C                C  P   LNG   ED     +  G  ++++
Sbjct: 373 CNAQGTWEPSAPVCEK-------------ECQAPPNILNGQK-EDRHMVRFDPGTSIKYS 418
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
           CN  + L+GEE+I CT  G W+   P+CK A CE  G     K  P   F  P   +  +
Sbjct: 419 CNPGYVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQLLTK--PQHQFVRP--DVNSS 474
Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220
           C +GY     ++ +    CQ    W ++I  C   T
Sbjct: 475 CGEGY----KLSGSVYQECQGTIPWFMEIRLCKEIT 506

>pdb|2GSX|A Chain A, Complement Receptor Type 2 Length = 951

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
           + C  P   LNG +    T  P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 1   ISCGSPPPILNGRISYYST--PIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 58
Query: 150 PPRCKARCEYPGEPQ----NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS 205
            P+C+   +Y   P+     G  I     Y  GD +   C   +     +      +CQ+
Sbjct: 59  APKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNF----SMNGNKSVWCQA 114
Query: 206 DGTWS-LDIPHCTN 218
           +  W    +P C +
Sbjct: 115 NNMWGPTRLPTCVS 128

>pdb|2Q7Z|A Chain A, Solution Structure Of The 30 Scr Domains Of Human Complement Receptor 1 Length = 1931

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 95/232 (40%), Gaps = 30/232 (12%)
Query: 2    THPVFRVSQGQWSGEVPTCQQIICPK--IVVENPYLTLVEQNNTYRGHAIFQCS------ 53
            +H V    +  W+  VP C+QI CP    ++   +      +  Y     + C       
Sbjct: 1710 SHCVLAGMKALWNSSVPVCEQIFCPNPPAILNGRHTGTPFGDIPYGKEISYACDTHPDRG 1769
Query: 54   WGYQLKGPPDIVC----QKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIE 109
              + L G   I C    Q NG WS   P C             P  CP P    NGH I 
Sbjct: 1770 MTFNLIGESSIRCTSDPQGNGVWSSPAPRCELSV---------PAACPHPPKIQNGHYIG 1820
Query: 110  DPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNG-- 166
                  Y  G  + + C+  + L+G+  I CT+ G WS+    CK   C +P    NG  
Sbjct: 1821 GHVS-LYLPGMTISYICDPGYLLVGKGFIFCTDQGIWSQLDHYCKEVNCSFPLF-MNGIS 1878
Query: 167  KIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
            K + +K  Y  GD++ + C DGY   L+ +P S   CQ+D  W   +  CT+
Sbjct: 1879 KELEMKKVYHYGDYVTLKCEDGYT--LEGSPWS--QCQADDRWDPPLAKCTS 1926

>pdb|1C1Z|A Chain A, Crystal Structure Of Human Beta-2-Glycoprotein-I (Apolipoprotein-H) Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 8   VSQGQWSGEVPTCQQIICPK-----IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP 62
             +G+WS E+P C  IICP            Y      N+ YR  A+F+C   + + G  
Sbjct: 106 TEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGND 165
Query: 63  DIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
            I C  +G+W+  +PEC              V CP P+ P NG  +  P           
Sbjct: 166 TITCTTHGNWT-KLPECRE------------VKCPFPSRPDNG-FVNYPAKPTLYYKDKA 211
Query: 123 QFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYP 160
            F C+D + L G E I CT+ G WS A P CKA C+ P
Sbjct: 212 TFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKASCKLP 248

>pdb|1QUB|A Chain A, Crystal Structure Of The Glycosylated Five-domain Human Beta2- Glycoprotein I Purified From Blood Plasma Length = 319

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 8   VSQGQWSGEVPTCQQIICPK-----IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP 62
             +G+WS E+P C  IICP            Y      N+ YR  A+F+C   + + G  
Sbjct: 106 TEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGND 165
Query: 63  DIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
            I C  +G+W+  +PEC              V CP P+ P NG  +  P           
Sbjct: 166 TITCTTHGNWT-KLPECRE------------VKCPFPSRPDNG-FVNYPAKPTLYYKDKA 211
Query: 123 QFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYP 160
            F C+D + L G E I CT+ G WS A P CKA C+ P
Sbjct: 212 TFGCHDGYSLDGPEEIECTKLGNWS-AMPSCKASCKVP 248

>pdb|2WII|C Chain C, Complement C3b In Complex With Factor H Domains 1-4 Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 44  YRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPL 103
           Y   A++ C+ GYQL G  +        W+  IP C              V C     P 
Sbjct: 93  YGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICEV------------VKCLPVTAPE 140
Query: 104 NGHLIEDPT--GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYP 160
           NG ++         Y  G  ++F CN  + + G+E + C++ G WS+  P+C +  C+ P
Sbjct: 141 NGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSP 200
Query: 161 GEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
            +  NG  I  K  Y   +  Q  CN GY
Sbjct: 201 -DVINGSPISQKIIYKENERFQYKCNMGY 228

>pdb|3GAU|A Chain A, Solution Structure Of Human Complement Factor H In 50 Mm Nacl Buffer Length = 1213

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 44  YRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPL 103
           Y   A++ C+ GYQL G  +        W+  IP C              V C     P 
Sbjct: 88  YGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICEV------------VKCLPVTAPE 135
Query: 104 NGHLIEDPT--GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYP 160
           NG ++         Y  G  ++F CN  + + G+E + C++ G WS+  P+C +  C+ P
Sbjct: 136 NGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSP 195
Query: 161 GEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
            +  NG  I  K  Y   +  Q  CN GY
Sbjct: 196 -DVINGSPISQKIIYKENERFQYKCNMGY 223

>pdb|1HAQ|A Chain A, Four Models Of Human Factor H Determined By Solution Scattering Curve-Fitting And Homology Modelling Length = 1213

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 44  YRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPL 103
           Y   A++ C+ GYQL G  +        W+  IP C              V C     P 
Sbjct: 88  YGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICEV------------VKCLPVTAPE 135
Query: 104 NGHLIEDPT--GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYP 160
           NG ++         Y  G  ++F CN  + + G+E + C++ G WS+  P+C +  C+ P
Sbjct: 136 NGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSP 195
Query: 161 GEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
            +  NG  I  K  Y   +  Q  CN GY
Sbjct: 196 -DVINGSPISQKIIYKENERFQYKCNMGY 223

>pdb|2QFG|A Chain A, Solution Structure Of The N-Terminal Scr-15 FRAGMENT OF Complement Factor H Length = 312

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 44  YRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPL 103
           Y   A++ C+ GYQL G  +        W+  IP C              V C     P 
Sbjct: 90  YGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICEV------------VKCLPVTAPE 137
Query: 104 NGHLIEDPT--GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYP 160
           NG ++         Y  G  ++F CN  + + G+E + C++ G WS+  P+C +  C+ P
Sbjct: 138 NGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSP 197
Query: 161 GEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
            +  NG  I  K  Y   +  Q  CN GY
Sbjct: 198 -DVINGSPISQKIIYKENERFQYKCNMGY 225

>pdb|3O8E|B Chain B, Structure Of Extracelllar Portion Of Cd46 In Complex With Adenovirus Type 11 Knob Length = 252

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPR 152
           CP    PLNG  +  P  G Y  G  + F CN+ ++L+GEE + C   G    WS  PP 
Sbjct: 65  CPYIRDPLNGQAV--PANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPI 122
Query: 153 C-KARCEYPGEPQNGK-IIPLKFFYDPGDHIQVTCNDG-YVKPLDITPTSGPYCQSDGTW 209
           C K  C  P + +NGK        ++  D +  +C+      P  +   S  YC  +  W
Sbjct: 123 CEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVW 182
Query: 210 SLDIPHC 216
           S   P C
Sbjct: 183 SRAAPEC 189

>pdb|1NTL|A Chain A, Model Of Mouse Crry-Ig Determined By Solution Scattering, Curve Fitting And Homology Modelling Length = 551

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 35/223 (15%)
Query: 13  WSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWG------YQLKGPPDI 64
           W  E P C+ I C  P  +    + +   ++  Y     ++C+        + L G P +
Sbjct: 114 WDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVGEPSL 173
Query: 65  VCQKN----GSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGA 120
            C  N    G WSG  P+C                C  P    N  ++ +     + +  
Sbjct: 174 YCTSNDGEIGVWSGPPPQCIELN-----------KCTPPPYVENAVMLSE-NRSLFSLRD 221
Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRC--KARCEYPGEP---QNGKIIPLKFFY 175
           I++F C+    + G  ++ C    +W    P C     C  P E    Q G  +  +++Y
Sbjct: 222 IVEFRCHPGFIMKGASSVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKKEYYY 281
Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
             G+++ + C DGY     +  +S   CQSDG+W+  +  C +
Sbjct: 282 --GENVTLECEDGYT----LEGSSQSQCQSDGSWNPLLAKCVS 318

>pdb|3IYP|F Chain F, The Interaction Of Decay-Accelerating Factor With Echovirus 7 Length = 381

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 12  QWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS 71
           +WS  V  C++  CP           V     +     F C+ GY+L G     C  +GS
Sbjct: 150 KWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGS 209
Query: 72  ---WSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
              WS  +PEC              ++CP P    NG +  +     YR    + +ACN 
Sbjct: 210 SVQWSDPLPECRE------------IYCPAPPQIDNGIIQGERDHYGYRQS--VTYACNK 255
Query: 129 RHHLLGEETIVCT---ETGRWSRAPPRCKAR 156
              ++GE +I CT   + G WS  PP C+ +
Sbjct: 256 GFTMIGEHSIYCTVNNDEGEWSGPPPECRGK 286

>pdb|3IYP|F Chain F, The Interaction Of Decay-Accelerating Factor With Echovirus 7 Length = 381

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 30  VENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGP--PDIVCQKNGSWSGAIPECNAXXXXX 86
           ++ PY+T   QN    G  + ++C  GY+ +    P + C +N  WS A+  C       
Sbjct: 109 LKQPYIT---QNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKK---- 161
Query: 87  XXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG-- 144
                    CP P    NG +  D  GG    GA + F+CN  + L G  +  C  +G  
Sbjct: 162 --------SCPNPGEIRNGQI--DVPGG-ILFGATISFSCNTGYKLFGSTSSFCLISGSS 210
Query: 145 -RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPY 202
            +WS   P C+   C  P +  NG I   +  Y     +   CN G+     +      Y
Sbjct: 211 VQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFT----MIGEHSIY 266
Query: 203 C---QSDGTWSLDIPHC 216
           C     +G WS   P C
Sbjct: 267 CTVNNDEGEWSGPPPEC 283

>pdb|1OJV|A Chain A, Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator. Length = 254

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 61/150 (40%), Gaps = 20/150 (13%)
Query: 12  QWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS 71
           +WS  V  C++  CP           V     +     F C+ GY+L G     C  +GS
Sbjct: 118 KWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGS 177
Query: 72  ---WSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
              WS  +PEC              ++CP P    NG +  +     YR    + +ACN 
Sbjct: 178 SVQWSDPLPECRE------------IYCPAPPQIDNGIIQGERDHYGYRQS--VTYACNK 223
Query: 129 RHHLLGEETIVCT---ETGRWSRAPPRCKA 155
              ++GE +I CT   + G WS  PP C+ 
Sbjct: 224 GFTMIGEHSIYCTVNNDEGEWSGPPPECRG 253

>pdb|1OJV|A Chain A, Decay Accelerating Factor (Cd55): The Structure Of An Intact Human Complement Regulator. Length = 254

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 30  VENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGP--PDIVCQKNGSWSGAIPECNAXXXXX 86
           ++ PY+T   QN    G  + ++C  GY+ +    P + C +N  WS A+  C       
Sbjct: 77  LKQPYIT---QNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKK---- 129
Query: 87  XXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG-- 144
                    CP P    NG +  D  GG    GA + F+CN  + L G  +  C  +G  
Sbjct: 130 --------SCPNPGEIRNGQI--DVPGG-ILFGATISFSCNTGYKLFGSTSSFCLISGSS 178
Query: 145 -RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPY 202
            +WS   P C+   C  P +  NG I   +  Y     +   CN G+     +      Y
Sbjct: 179 VQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFT----MIGEHSIY 234
Query: 203 C---QSDGTWSLDIPHC 216
           C     +G WS   P C
Sbjct: 235 CTVNNDEGEWSGPPPEC 251

>pdb|2XRB|A Chain A, Structure Of The N-Terminal Four Domains Of The Complement Regulator Rat Crry Length = 290

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 19  TCQQIICPKIVVENPY-----LTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC---QKNG 70
           T  Q +C +   E P      +  V  +  +     + C+ GY+L G    +C    ++ 
Sbjct: 88  TSPQDVCIRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSV 147
Query: 71  SWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN--- 127
           +W    P C +            + C +P    NG     P    +  G ++ + CN   
Sbjct: 148 AWDAEAPICES------------IPCEIPPSIPNGDFFS-PNREDFHYGMVVTYQCNTDA 194
Query: 128 ---DRHHLLGEETIVCT----ETGRWSRAPPRCKA--RCEYPGEPQNGKIIPLKFFYDPG 178
                 +L+GE +I CT    + G WS  PP+C    +C  P       +   K  +   
Sbjct: 195 RGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLR 254
Query: 179 DHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           D ++  C DG++   D    S  YC+S   W   +P C 
Sbjct: 255 DMVEFRCQDGFMMKGD----SSVYCRSLNRWEPQLPSCA 289

>pdb|2OK5|A Chain A, Human Complement Factor B Length = 752

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 50  FQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIE 109
           F C  GY L+G  +  CQ NG WSG    C+              +C  P +P+    + 
Sbjct: 114 FHCYDGYTLRGSANRTCQVNGRWSGQTAICD----------NGAGYCSNPGIPIGTRKV- 162
Query: 110 DPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEY 159
              G  YR+   + + C+    L G +   C E G WS   P C+    Y
Sbjct: 163 ---GSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMY 209

>pdb|2OK5|A Chain A, Human Complement Factor B Length = 752

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 56/157 (35%), Gaps = 14/157 (8%)
Query: 65  VCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
            C+  GSWS    +               +HCP P    NG     P    Y V   + F
Sbjct: 60  TCRSTGSWSTLKTQ---DQKTVRKAECRAIHCPRPHDFENGEYW--PRSPYYNVSDEISF 114
Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPLKFFYDPGDHI 181
            C D + L G     C   GRWS     C      C  PG P   + +  ++  +  D +
Sbjct: 115 HCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLE--DSV 172
Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
              C+ G    L +  +    CQ  G+WS   P C +
Sbjct: 173 TYHCSRG----LTLRGSQRRTCQEGGSWSGTEPSCQD 205

>pdb|2XWB|F Chain F, Crystal Structure Of Complement C3b In Complex With Factors B And D Length = 732

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 50  FQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIE 109
           F C  GY L+G  +  CQ NG WSG    C+              +C  P +P+    + 
Sbjct: 95  FHCYDGYTLRGSANRTCQVNGRWSGQTAICD----------NGAGYCSNPGIPIGTRKV- 143
Query: 110 DPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEY 159
              G  YR+   + + C+    L G +   C E G WS   P C+    Y
Sbjct: 144 ---GSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMY 190

>pdb|2XWB|F Chain F, Crystal Structure Of Complement C3b In Complex With Factors B And D Length = 732

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 14/156 (8%)
Query: 66  CQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           C+  GSWS    +               +HCP P    NG     P    Y V   + F 
Sbjct: 42  CRSTGSWSTLKTQ---DQKTVRKAECRAIHCPRPHDFENGEYW--PRSPYYNVSDEISFH 96
Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPLKFFYDPGDHIQ 182
           C D + L G     C   GRWS     C      C  PG P   + +  ++  +  D + 
Sbjct: 97  CYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLE--DSVT 154
Query: 183 VTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
             C+ G    L +  +    CQ  G+WS   P C +
Sbjct: 155 YHCSRG----LTLRGSQRRTCQEGGSWSGTEPSCQD 186

>pdb|3HRZ|D Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor B Length = 741

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 50  FQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIE 109
           F C  GY L+G  +  CQ NG WSG    C+              +C  P +P+    + 
Sbjct: 104 FHCYDGYTLRGSANRTCQVNGRWSGQTAICD----------NGAGYCSNPGIPIGTRKV- 152
Query: 110 DPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEY 159
              G  YR+   + + C+    L G +   C E G WS   P C+    Y
Sbjct: 153 ---GSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMY 199

>pdb|3HRZ|D Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor B Length = 741

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 56/157 (35%), Gaps = 14/157 (8%)
Query: 65  VCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
            C+  GSWS    +               +HCP P    NG     P    Y V   + F
Sbjct: 50  TCRSTGSWSTLKTQ---DQKTVRKAECRAIHCPRPHDFENGEYW--PRSPYYNVSDEISF 104
Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPLKFFYDPGDHI 181
            C D + L G     C   GRWS     C      C  PG P   + +  ++  +  D +
Sbjct: 105 HCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLE--DSV 162
Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
              C+ G    L +  +    CQ  G+WS   P C +
Sbjct: 163 TYHCSRG----LTLRGSQRRTCQEGGSWSGTEPSCQD 195

>pdb|1H04|P Chain P, Human Cd55 Domains 3 & 4 Length = 125

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 50  FQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGH 106
           F C+ GY+L G     C  +GS   WS  +PEC              ++CP P    NG 
Sbjct: 28  FSCNTGYKLAGSTSSFCLISGSSVQWSDPLPECRE------------IYCPAPPQIDNGI 75
Query: 107 LIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA 155
           +  +     YR    + +ACN    ++GE +I CT   + G WS  PP C+ 
Sbjct: 76  IQGERDHYGYRQS--VTYACNKGFTMIGEHSIYCTVNNDAGEWSGPPPECRG 125

>pdb|1OK3|A Chain A, Decay Accelerating Factor (cd55): The Structure Of An Intact Human Complement Regulator. Length = 254

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 20/150 (13%)
Query: 12  QWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS 71
           +WS  V  C++  CP           V     +     F C+ GY+L G     C  +GS
Sbjct: 118 KWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGS 177
Query: 72  ---WSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
              WS  +PEC              ++CP P    NG +  +     YR    + +ACN 
Sbjct: 178 SVQWSDPLPECRE------------IYCPAPPQIDNGIIQGERDHYGYRQS--VTYACNK 223
Query: 129 RHHLLGEETIVCT---ETGRWSRAPPRCKA 155
               +GE +I CT   + G WS  PP C+ 
Sbjct: 224 GFTXIGEHSIYCTVNNDEGEWSGPPPECRG 253

>pdb|1OK3|A Chain A, Decay Accelerating Factor (cd55): The Structure Of An Intact Human Complement Regulator. Length = 254

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 32/197 (16%)
Query: 30  VENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGP--PDIVCQKNGSWSGAIPECNAXXXXX 86
           ++ PY+T   QN    G  + ++C  GY+ +    P + C +N  WS A+  C       
Sbjct: 77  LKQPYIT---QNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKK---- 129
Query: 87  XXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG-- 144
                    CP P    NG +  D  GG    GA + F+CN  + L G  +  C  +G  
Sbjct: 130 --------SCPNPGEIRNGQI--DVPGG-ILFGATISFSCNTGYKLFGSTSSFCLISGSS 178
Query: 145 -RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPY 202
            +WS   P C+   C  P +  NG I   +  Y     +   CN G+            Y
Sbjct: 179 VQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTX----IGEHSIY 234
Query: 203 C---QSDGTWSLDIPHC 216
           C     +G WS   P C
Sbjct: 235 CTVNNDEGEWSGPPPEC 251

>pdb|2RLQ|A Chain A, Nmr Structure Of Ccp Modules 2-3 Of Complement Factor H Length = 129

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 44  YRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPL 103
           Y   A++ C+ GYQL G  +        W+  IP C              V C     P 
Sbjct: 29  YGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICEV------------VKCLPVTAPE 76
Query: 104 NGHLIEDPT--GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           NG ++         Y  G  ++F CN  + + G+E + C++ G WS+  P+C
Sbjct: 77  NGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKC 128

>pdb|2RLQ|A Chain A, Nmr Structure Of Ccp Modules 2-3 Of Complement Factor H Length = 129

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 113 GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPL 171
           G  +  G    + CN+ + LLGE      +T  W+   P C+  +C     P+NGKI+  
Sbjct: 24  GNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSS 83
Query: 172 KF----FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
                  Y  G  ++  CN GY     I      +C  DG WS + P C 
Sbjct: 84  AMEPDREYHFGQAVRFVCNSGY----KIEGDEEMHCSDDGFWSKEKPKCV 129

>pdb|1H03|P Chain P, Human Cd55 Domains 3 & 4 Length = 125

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 50  FQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGH 106
           F C+ GY+L G     C  +GS   WS  +PEC              ++CP P    NG 
Sbjct: 28  FSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE------------IYCPAPPQIDNGI 75
Query: 107 LIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA 155
           +  +     YR    + +ACN    ++GE +I CT   + G WS  PP C+ 
Sbjct: 76  IQGERDHYGYR--QSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 125

>pdb|1H2P|P Chain P, Human Cd55 Domains 3 & 4 Length = 125

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 50  FQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGH 106
           F C+ GY+L G     C  +GS   WS  +PEC              ++CP P    NG 
Sbjct: 28  FSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE------------IYCPAPPQIDNGI 75
Query: 107 LIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA 155
           +  +     YR    + +ACN    ++GE +I CT   + G WS  PP C+ 
Sbjct: 76  IQGERDHYGYR--QSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 125

>pdb|1UPN|E Chain E, Complex Of Echovirus Type 12 With Domains 3 And 4 Of Its Receptor Decay Accelerating Factor (Cd55) By Cryo Electron Microscopy At 16 A Length = 129

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 50  FQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGH 106
           F C+ GY+L G     C  +GS   WS  +PEC              ++CP P    NG 
Sbjct: 32  FSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE------------IYCPAPPQIDNGI 79
Query: 107 LIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA 155
           +  +     YR    + +ACN    ++GE +I CT   + G WS  PP C+ 
Sbjct: 80  IQGERDHYGYR--QSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 129

>pdb|1NTJ|A Chain A, Model Of Rat Crry Determined By Solution Scattering, Curve Fitting And Homology Modelling Length = 320

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 82/223 (36%), Gaps = 38/223 (17%)
Query: 13  WSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWG------YQLKGPPDI 64
           W  E P C+ I C  P  +    + +   ++  Y     +QC+        + L G P I
Sbjct: 116 WDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSI 175
Query: 65  VCQ----KNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGA 120
            C     + G WSG  P+C             P H       +   +I       + +  
Sbjct: 176 HCTSIDGQVGVWSGPPPQC------IELNKCTPPH-------VENAVIVSKNKSLFSLRD 222
Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRC---KARCEYPGEPQNGKI-IPLKFFYD 176
           +++F C D   + G+ ++ C    RW    P C   K+   + GE  NG + +P      
Sbjct: 223 MVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCFKVKSCGAFLGELPNGHVFVPQNL--Q 280
Query: 177 PGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHC 216
            G  +   CN GY     +   S  +C  DG    W+  +P C
Sbjct: 281 LGAKVTFVCNTGY----QLKGNSSSHCVLDGVESIWNSSVPVC 319

>pdb|3ERB|A Chain A, The Crystal Structure Of C2b, A Fragment Of Complement Component C2 Produced During C3-Convertase Formation Length = 223

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 56/159 (35%), Gaps = 16/159 (10%)
Query: 61  PPDIVCQKNGSWSGAIPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGA 120
           P   +C+ +G W     +              PV CP P    NG  I  P  G Y VG 
Sbjct: 39  PASRLCKSSGQW-----QTPGATRSLSKAVCKPVRCPAPVSFENG--IYTPRLGSYPVGG 91
Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRC---KARCEYPGEPQNGKIIPLKFFYDP 177
            + F C D   L G     C   G W      C      C  PG       +   F +  
Sbjct: 92  NVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLG--AVRTGFRFGH 149
Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           GD ++  C+   V    +T +S   CQ +G WS   P C
Sbjct: 150 GDKVRYRCSSNLV----LTGSSERECQGNGVWSGTEPIC 184

>pdb|1E5G|A Chain A, Solution Structure Of Central Cp Module Pair Of A Pox Virus Complement Inhibitor Length = 120

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 95  HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVC----TETGRWSRAP 150
            CP P    NG L      G    G+ + ++CN  +HL+GE    C    T +  W+   
Sbjct: 2   RCPSPRDIDNGQLDI----GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEA 57
Query: 151 PRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTW 209
           P C++ +C+ P    NG+    + FY  G  +  +CN GY     +   SG  C S G W
Sbjct: 58  PICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGY----SLIGNSGVLC-SGGEW 112
Query: 210 SLDIPHC 216
           S D P C
Sbjct: 113 S-DPPTC 118

>pdb|1G40|A Chain A, Crystal Structure Of A Complement Protein That Regulates Both Pathways Of Complement Activation And Binds Heparan Sulfate Proteoglycans Length = 244

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 95  HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVC----TETGRWSRAP 150
            CP P    NG L      G    G+ + ++CN  +HL+GE    C    T +  W+   
Sbjct: 66  RCPSPRDIDNGQL----DIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEA 121
Query: 151 PRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTW 209
           P C++ +C+ P    NG+    + FY  G  +  +CN GY     +   SG  C S G W
Sbjct: 122 PICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGY----SLIGNSGVLC-SGGEW 176
Query: 210 SLDIPHC 216
           S D P C
Sbjct: 177 S-DPPTC 182

>pdb|1M11|R Chain R, Structural Model Of Human Decay-accelerating Factor Bound To Echovirus 7 From Cryo-electron Microscopy Length = 243

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 25/168 (14%)
Query: 30  VENPYLTLVEQNNTYRGHAI-FQCSWGYQLK--GPPDIVCQKNGSWSGAIPECNAXXXXX 86
           ++ PY+T   QN    G  + ++C  GY+ +    P + C +N  WS A+  C       
Sbjct: 75  LKQPYIT---QNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKK---- 127
Query: 87  XXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG-- 144
                    CP P    NG +  D  GG    GA + F+CN  + L G  +  C  +G  
Sbjct: 128 --------SCPNPGEIRNGQI--DVPGG-ILFGATISFSCNTGYKLFGSTSSFCLISGSS 176
Query: 145 -RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYV 190
            +WS   P C+   C  P +  NG I   +  Y     +   CN G+ 
Sbjct: 177 VQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFT 224

>pdb|1CKL|A Chain A, N-Terminal Two Domains Of Human Cd46 (Membrane Cofactor Protein, Mcp) Length = 126

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPR 152
           CP    PLNG  +  P  G Y  G  + F CN+ ++L+GEE + C   G    WS  PP 
Sbjct: 65  CPYIRDPLNGQAV--PANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPI 122
Query: 153 CK 154
           C+
Sbjct: 123 CE 124

>pdb|1GKG|A Chain A, Structure Determination And Rational Mutagenesis Reveal Binding Surface Of Immune Adherence Receptor, Cr1 (Cd35) Length = 136

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 56/136 (41%), Gaps = 22/136 (16%)
Query: 96  CPVPALPLNG--HLIEDPTGGPYRVGAILQFACNDRHHLLGE---ETIVCTETGRWSRAP 150
           C  P  P+NG  H+I D      +VG+ + ++C   H L+G    E I+   T  WS  P
Sbjct: 7   CKTPPDPVNGMVHVITD-----IQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKP 61
Query: 151 PRC-KARCEYPGEPQNGKIIPL---KFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQ 204
           P C +  C  P    NG  I      F Y  G  +   CN G    K  ++      YC 
Sbjct: 62  PICQRIPCGLPPTIANGDFISTNRENFHY--GSVVTYRCNLGSRGRKVFELVGEPSIYCT 119
Query: 205 SD----GTWSLDIPHC 216
           S+    G WS   P C
Sbjct: 120 SNDDQVGIWSGPAPQC 135

>pdb|1W2R|A Chain A, Solution Structure Of Cr2 Scr 1-2 By X-Ray Scattering Length = 142

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
           + C  P   LNG +    T  P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 5   ISCGSPPPILNGRISYYST--PIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 62
Query: 150 PPRCKARCEYPGEPQ----NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS 205
            P+C+   +Y   P+     G  I     Y  GD +   C   +     +      +CQ+
Sbjct: 63  APKCQYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNF----SMNGNKSVWCQA 118
Query: 206 DGTWS-LDIPHCTN 218
           +  W    +P C +
Sbjct: 119 NNMWGPTRLPTCVS 132

>pdb|3OED|C Chain C, The Structure Of The Complex Between Complement Receptor Cr2 And Its Ligand Complement Fragment C3d Length = 135

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
           + C  P   LNG +    T  P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 3   ISCGSPPPILNGRISYYST--PIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 60
Query: 150 PPRCKARCEYPGEPQ----NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS 205
            P+C+   +Y   P+     G  I     Y  GD +   C   +     +      +CQ+
Sbjct: 61  APKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNF----SMNGNKSVWCQA 116
Query: 206 DGTWS-LDIPHCTN 218
           +  W    +P C +
Sbjct: 117 NNMWGPTRLPTCVS 130

>pdb|1GHQ|B Chain B, Cr2-C3d Complex Structure Length = 134

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
           + C  P   LNG +    T  P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 2   ISCGSPPPILNGRISYYST--PIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 59
Query: 150 PPRCKARCEYPGEPQ----NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS 205
            P+C+   +Y   P+     G  I     Y  GD +   C   +     +      +CQ+
Sbjct: 60  APKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNF----SMNGNKSVWCQA 115
Query: 206 DGTWS-LDIPHCTN 218
           +  W    +P C +
Sbjct: 116 NNMWGPTRLPTCVS 129

>pdb|2QFH|A Chain A, Solution Structure Of The C-Terminal Scr-1620 FRAGMENT OF Complement Factor H Length = 333

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 23/178 (12%)
Query: 18  PTCQQIICPKIVVENPYLTLVEQNNTYRG--HAIFQCSWGYQLKGPPDIVCQKNGSWSGA 75
           P+C +  C  +      + + E+ + Y+      + C+  Y++ G  ++ C  N  W+G 
Sbjct: 61  PSCIKTDCLSLPSFENAIPMGEKKDVYKAGEQVTYTCATYYKMDGASNVTC-INSRWTGR 119
Query: 76  IPECNAXXXXXXXXXXNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGE 135
            P C                C  P    N +++       Y  G  +++ C   + + G+
Sbjct: 120 -PTCRD------------TSCVNPPTVQNAYIVSRQMSK-YPSGERVRYQCRSPYEMFGD 165
Query: 136 ETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPLKF-FYDPGDHIQVTCNDGY 189
           E ++C   G W+  PP+CK    +C  P    NG I       Y P   ++  C + Y
Sbjct: 166 EEVMCL-NGNWTE-PPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLY 221

>pdb|1LY2|A Chain A, Crystal Structure Of Unliganded Human Cd21 Scr1-Scr2 (Complement Receptor Type 2) Length = 130

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
             C  P   LNG +    T  P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 2   ASCGSPPPILNGRISYYST--PIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 59
Query: 150 PPRCKARCEYPGEPQ----NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS 205
            P+C+   +Y   P+     G  I     Y  GD +   C   +     +      +CQ+
Sbjct: 60  APKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNF----SMNGNKSVWCQA 115
Query: 206 DGTWS-LDIPHCTN 218
           +  W    +P C +
Sbjct: 116 NNMWGPTRLPTCVS 129

>pdb|2A55|A Chain A, Solution Structure Of The Two N-Terminal Ccp Modules Of C4b- Binding Protein (C4bp) Alpha-Chain Length = 133

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 9/124 (7%)
Query: 97  PVPALPLNGHLIEDPTGGPYRVGAILQFAC---NDRHHLLGEETIVCTETGRWSRAPPRC 153
           P P L     +    T   ++ G  L++ C     R H    +T+ C   G W       
Sbjct: 5   PPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSH--STQTLTCNSDGEWVYNTFCI 62
Query: 154 KARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT-WSLD 212
             RC +PGE +NG+ + +K     G  I+ +C++G+   L  + TS    Q  G  WS  
Sbjct: 63  YKRCRHPGELRNGQ-VEIKTDLSFGSQIEFSCSEGFF--LIGSTTSRCEVQDRGVGWSHP 119
Query: 213 IPHC 216
           +P C
Sbjct: 120 LPQC 123

>pdb|1NWV|A Chain A, Solution Structure Of A Functionally Active Component Of Decay Accelerating Factor Length = 129

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 96  CPVPALPLNGHLIEDP--TGGPYRVGAILQFACND--RHHLLGEETIVCTETGRWSRAPP 151
           C VP   LN   ++ P  T   + VG ++++ C    R        + C +  +WS A  
Sbjct: 4   CEVPTR-LNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVE 62
Query: 152 RCKAR-CEYPGEPQNGKI-IPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT- 208
            CK + C  PGE +NG+I +P    +  G  I  +CN GY     +  ++  +C   G+ 
Sbjct: 63  FCKKKSCPNPGEIRNGQIDVPGGILF--GATISFSCNTGY----KLFGSTSSFCLISGSS 116
Query: 209 --WSLDIPHCTNY 219
             WS  +P C  +
Sbjct: 117 VQWSDPLPECREH 129

>pdb|2ATY|A Chain A, Complement Receptor Chimaeric Conjugate Cr2-Ig Length = 376

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
           + C  P   LNG +    T  P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 2   ISCGSPPPILNGRISYYST--PIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 59
Query: 150 PPRCKARCEYPGEPQ----NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS 205
            P+C+   +Y   P+     G  I     Y  GD +   C   +     +      +CQ+
Sbjct: 60  APKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNF----SMNGNKSVWCQA 115
Query: 206 DGTWS-LDIPHCTN 218
           +  W    +P C +
Sbjct: 116 NNMWGPTRLPTCVS 129

>pdb|1VVC|A Chain A, C-Terminal Half Of Vaccinia Virus Complement Control Protein, Nmr, Minimized Average Structure Length = 118

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTL-VEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           S G+WS + PTCQ + CP   + N YL+   +++ +Y  +  F+C +GY+L G     C 
Sbjct: 46  SGGEWS-DPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCS 104
Query: 68  KNGSWSGAIPEC 79
              +W   +P+C
Sbjct: 105 PGNTWKPELPKC 116

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
3o8e_B	252	Membrane cofactor protein; short consensus repeat,	1e-41
3o8e_B	252	Membrane cofactor protein; short consensus repeat,	7e-28
3o8e_B	252	Membrane cofactor protein; short consensus repeat,	1e-27
3o8e_B	252	Membrane cofactor protein; short consensus repeat,	6e-05
1qub_A	319	Protein (human BETA2-glycoprotein I); short consen	5e-41
1qub_A	319	Protein (human BETA2-glycoprotein I); short consen	5e-37
1qub_A	319	Protein (human BETA2-glycoprotein I); short consen	2e-31
1qub_A	319	Protein (human BETA2-glycoprotein I); short consen	1e-18
2wii_C	277	H factor 1, complement factor H; immune system, su	5e-38
2wii_C	277	H factor 1, complement factor H; immune system, su	9e-30
2wii_C	277	H factor 1, complement factor H; immune system, su	1e-25
1ok3_A	254	CD55, CR, DAF, complement decay-accelerating facto	6e-38
1ok3_A	254	CD55, CR, DAF, complement decay-accelerating facto	1e-26
1ok3_A	254	CD55, CR, DAF, complement decay-accelerating facto	3e-26
1ok3_A	254	CD55, CR, DAF, complement decay-accelerating facto	9e-21
3hrz_D	741	Complement factor B; serine protease, glycosilated	4e-37
3hrz_D	741	Complement factor B; serine protease, glycosilated	5e-31
3hrz_D	741	Complement factor B; serine protease, glycosilated	6e-21
3hrz_D	741	Complement factor B; serine protease, glycosilated	2e-07
3hrz_D	741	Complement factor B; serine protease, glycosilated	3e-05
1rid_A	244	Complement control protein; regulation, SCR, immun	5e-37
1rid_A	244	Complement control protein; regulation, SCR, immun	1e-30
1rid_A	244	Complement control protein; regulation, SCR, immun	8e-06
2c8i_E	316	CD55, complement decay-accelerating factor; picorn	7e-37
2c8i_E	316	CD55, complement decay-accelerating factor; picorn	2e-29
2c8i_E	316	CD55, complement decay-accelerating factor; picorn	1e-26
2c8i_E	316	CD55, complement decay-accelerating factor; picorn	4e-26
2xrb_A	290	Complement regulatory protein CRRY; immune system,	1e-35
2xrb_A	290	Complement regulatory protein CRRY; immune system,	6e-28
2xrb_A	290	Complement regulatory protein CRRY; immune system,	3e-25
2xrb_A	290	Complement regulatory protein CRRY; immune system,	7e-23
2xrb_A	290	Complement regulatory protein CRRY; immune system,	9e-13
3iyp_F	381	Complement decay-accelerating factor; virus, recep	6e-35
3iyp_F	381	Complement decay-accelerating factor; virus, recep	5e-29
3iyp_F	381	Complement decay-accelerating factor; virus, recep	4e-24
3iyp_F	381	Complement decay-accelerating factor; virus, recep	2e-19
3iyp_F	381	Complement decay-accelerating factor; virus, recep	1e-18
3iyp_F	381	Complement decay-accelerating factor; virus, recep	2e-08
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	1e-34
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	7e-32
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	4e-31
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	4e-30
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	5e-30
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	9e-29
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	3e-28
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	6e-25
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	8e-25
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	3e-24
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	5e-24
1ntl_A	551	CRRY-IG; immunology, complement, glycoprotein, SCR	2e-34
1ntl_A	551	CRRY-IG; immunology, complement, glycoprotein, SCR	1e-31
1ntl_A	551	CRRY-IG; immunology, complement, glycoprotein, SCR	9e-26
1ntl_A	551	CRRY-IG; immunology, complement, glycoprotein, SCR	4e-25
1ntl_A	551	CRRY-IG; immunology, complement, glycoprotein, SCR	2e-19
1ntj_A	320	Complement receptor related protein; immunology, g	3e-33
1ntj_A	320	Complement receptor related protein; immunology, g	2e-32
1ntj_A	320	Complement receptor related protein; immunology, g	6e-25
1ntj_A	320	Complement receptor related protein; immunology, g	1e-23
1ntj_A	320	Complement receptor related protein; immunology, g	3e-19
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	1e-32
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	6e-28
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	2e-27
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	4e-25
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	7e-25
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	3e-23
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	9e-23
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	1e-22
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	2e-22
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	9e-22
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	5e-21
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	7e-21
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	2e-20
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	3e-18
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	2e-14
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	3e-13
3erb_A	223	Complement C2; C3/C5 convertase, short consensus r	2e-30
3erb_A	223	Complement C2; C3/C5 convertase, short consensus r	4e-30
3erb_A	223	Complement C2; C3/C5 convertase, short consensus r	2e-18
3erb_A	223	Complement C2; C3/C5 convertase, short consensus r	5e-04
3sw0_X	188	H factor 1, complement factor H; innate immune res	4e-30
3sw0_X	188	H factor 1, complement factor H; innate immune res	1e-19
3sw0_X	188	H factor 1, complement factor H; innate immune res	3e-18
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	1e-29
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-29
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	3e-29
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-27
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-27
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-27
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	4e-27
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	8e-27
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	1e-26
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-26
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	1e-25
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	1e-25
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-25
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-24
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	5e-23
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	1e-22
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-22
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-22
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	1e-21
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-21
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	4e-21
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	2e-20
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	3e-20
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	7e-19
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	6e-15
2uwn_A	187	H factor 1, human complement factor H; alternative	2e-25
2uwn_A	187	H factor 1, human complement factor H; alternative	2e-18
2uwn_A	187	H factor 1, human complement factor H; alternative	4e-05
3gov_A	155	MAsp-1; complement, serine protease, beta barrel,	5e-25
3gov_A	155	MAsp-1; complement, serine protease, beta barrel,	2e-21
3gov_A	155	MAsp-1; complement, serine protease, beta barrel,	6e-11
3gov_A	155	MAsp-1; complement, serine protease, beta barrel,	8e-11
1h03_P	125	Complement decay-accelerating factor; immune syste	3e-23
1h03_P	125	Complement decay-accelerating factor; immune syste	3e-22
1h03_P	125	Complement decay-accelerating factor; immune syste	2e-13
1h03_P	125	Complement decay-accelerating factor; immune syste	2e-05
1gkn_A	128	Complement receptor type 1; module, SCR, structure	6e-23
1gkn_A	128	Complement receptor type 1; module, SCR, structure	2e-19
1gkn_A	128	Complement receptor type 1; module, SCR, structure	6e-11
1gkn_A	128	Complement receptor type 1; module, SCR, structure	6e-08
1ly2_A	130	CD21, complement receptor type 2; epstein BARR vir	2e-22
1ly2_A	130	CD21, complement receptor type 2; epstein BARR vir	9e-21
1ly2_A	130	CD21, complement receptor type 2; epstein BARR vir	1e-12
1ly2_A	130	CD21, complement receptor type 2; epstein BARR vir	2e-07
3r62_A	129	H factor 1, complement factor H; immunity, repeati	2e-20
3r62_A	129	H factor 1, complement factor H; immunity, repeati	1e-14
3r62_A	129	H factor 1, complement factor H; immunity, repeati	4e-08
1gkg_A	136	Complement receptor type 1; module, SCR, structure	7e-20
1gkg_A	136	Complement receptor type 1; module, SCR, structure	2e-19
1gkg_A	136	Complement receptor type 1; module, SCR, structure	1e-09
1gkg_A	136	Complement receptor type 1; module, SCR, structure	3e-05
2a55_A	133	C4B-binding protein; complement, SCR, CCP module,	1e-19
2a55_A	133	C4B-binding protein; complement, SCR, CCP module,	3e-17
2a55_A	133	C4B-binding protein; complement, SCR, CCP module,	3e-08
2qy0_A	159	Complement C1R subcomponent; serine protease, beta	1e-19
2qy0_A	159	Complement C1R subcomponent; serine protease, beta	3e-17
2qy0_A	159	Complement C1R subcomponent; serine protease, beta	2e-06
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	3e-17
2yby_A	124	Complement factor H; immune system, complement reg	3e-17
2yby_A	124	Complement factor H; immune system, complement reg	2e-05
2ehf_A	73	CUB and sushi domain-containing protein 1; CUB and	4e-16
2ehf_A	73	CUB and sushi domain-containing protein 1; CUB and	5e-13
2ehf_A	73	CUB and sushi domain-containing protein 1; CUB and	6e-11
2aty_A	376	Complement receptor chimeric conjugate CR2-IG; imm	8e-15
2aty_A	376	Complement receptor chimeric conjugate CR2-IG; imm	1e-07
2aty_A	376	Complement receptor chimeric conjugate CR2-IG; imm	8e-05
2yra_A	74	Seizure 6-like protein isoform 3; disulfide bond,	2e-12
2yra_A	74	Seizure 6-like protein isoform 3; disulfide bond,	3e-10
2yra_A	74	Seizure 6-like protein isoform 3; disulfide bond,	4e-09
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	2e-11
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	1e-10
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	1e-08
3tvj_A	86	Mannan-binding lectin serine protease 2 A chain; i	7e-11
3tvj_A	86	Mannan-binding lectin serine protease 2 A chain; i	6e-04
1gpz_A	399	Complement C1R component; hydrolase, activation, i	2e-08
1gpz_A	399	Complement C1R component; hydrolase, activation, i	3e-08
1gpz_A	399	Complement C1R component; hydrolase, activation, i	4e-08
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	5e-08
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	7e-06
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	6e-04
1srz_A	68	Gamma-aminobutyric acid type B receptor, subunit 1	5e-07

>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M* Length = 252

 Score =  140 bits (355), Expect = 1e-41
 Identities = 51/218 (23%), Positives = 74/218 (33%), Gaps = 28/218 (12%)

Query: 11  GQWSGE-VPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
             W       C +  CP I    N           +     F C+ GY L G   + C+ 
Sbjct: 50  HTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCEL 109

Query: 69  NGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
            GS   WSG  P C              V C  P    NG          +     + ++
Sbjct: 110 KGSVAIWSGKPPICE------------KVLCTPPPKIKNGKHTFSE-VEVFEYLDAVTYS 156

Query: 126 CN-----DRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGD 179
           C+     D   L+GE TI C +   WSRA P CK  +C +P      +I      +    
Sbjct: 157 CDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKA 216

Query: 180 HIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            +   C+ G+     +  +    C S+ TW   +P C 
Sbjct: 217 TVMFECDKGFY----LDGSDTIVCDSNSTWDPPVPKCL 250

>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M* Length = 252

 Score =  105 bits (263), Expect = 7e-28
 Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 23/179 (12%)

Query: 48  AIFQCSWGYQLKGPPD--IVCQKNGSWSG-AIPECNAFFFFFFFFFFNPVHCPVPALPLN 104
             ++C  GY    P     +C +N +W   +   C                CP    PLN
Sbjct: 26  VDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC------------YRETCPYIRDPLN 73

Query: 105 GHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPRCKAR-CEYP 160
           G  +  P  G Y  G  + F CN+ ++L+GEE + C   G    WS  PP C+   C  P
Sbjct: 74  GQAV--PANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPP 131

Query: 161 GEPQNGKIIPLKF-FYDPGDHIQVTCNDGY-VKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            + +NGK    +   ++  D +  +C+      P  +   S  YC  +  WS   P C 
Sbjct: 132 PKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK 190

>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M* Length = 252

 Score =  104 bits (260), Expect = 1e-27
 Identities = 39/154 (25%), Positives = 57/154 (37%), Gaps = 21/154 (13%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWG-----YQLKGP 61
           S   WSG+ P C++++C     ++N   T  E        A+ + C        + L G 
Sbjct: 112 SVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGE 171

Query: 62  PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAI 121
             I C  N  WS A PEC              V C  P +     +     G  +   A 
Sbjct: 172 STIYCGDNSVWSRAAPECK------------VVKCRFPVVENGKQI--SGFGKKFYYKAT 217

Query: 122 LQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA 155
           + F C+   +L G +TIVC     W    P+C  
Sbjct: 218 VMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLK 251

>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M* Length = 252

 Score = 41.8 bits (98), Expect = 6e-05
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 157 CEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS-LDIP 214
           CE P   +  ++I   K +Y+ G+ +   C  GY         +   C  + TW  +   
Sbjct: 1   CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYF--YIPPLATHTICDRNHTWLPVSDD 58

Query: 215 HCT 217
            C 
Sbjct: 59  ACY 61

>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A Length = 319

 Score =  141 bits (356), Expect = 5e-41
 Identities = 53/209 (25%), Positives = 75/209 (35%), Gaps = 21/209 (10%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG 70
           G W      C   +CP          +      Y     F C+ G+ L G     C + G
Sbjct: 51  GLWPINTLKCTPRVCPFAG-ILENGAVRYTTFEYPNTISFSCNTGFYLNGADSAKCTEEG 109

Query: 71  SWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI--EDPTGGPYRVGAILQFACND 128
            WS  +P C             P+ CP P++P    L   +   G          F C  
Sbjct: 110 KWSPELPVCA------------PIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLP 157

Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKII-PLKFFYDPGDHIQVTCND 187
           +H + G +TI CT  G W++ P   + +C +P  P NG +  P K      D     C+D
Sbjct: 158 QHAMFGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHD 217

Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           GY     +       C   G WS  +P C
Sbjct: 218 GYS----LDGPEEIECTKLGNWS-AMPSC 241

>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A Length = 319

 Score =  130 bits (329), Expect = 5e-37
 Identities = 60/222 (27%), Positives = 84/222 (37%), Gaps = 34/222 (15%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVEN-----PYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD 63
            +G+WS E+P C  IICP   +        Y      N+ YR  A+F+C   + + G   
Sbjct: 107 EEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDT 166

Query: 64  IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
           I C  +G+W+   PEC              V CP P+ P NG  +  P            
Sbjct: 167 ITCTTHGNWTKL-PEC------------REVKCPFPSRPDNGF-VNYPAKPTLYYKDKAT 212

Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKF--------FY 175
           F C+D + L G E I CT+ G WS A P CKA C+ P +         +           
Sbjct: 213 FGCHDGYSLDGPEEIECTKLGNWS-AMPSCKASCKVPVKKATVVYQGERVKIQEKFKNGM 271

Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
             GD +   C +           +      DGT    +P C 
Sbjct: 272 LHGDKVSFFCKNKE----KKCSYTEDAQCIDGTIE--VPKCF 307

>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A Length = 319

 Score =  116 bits (291), Expect = 2e-31
 Identities = 40/200 (20%), Positives = 63/200 (31%), Gaps = 28/200 (14%)

Query: 25  CPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD-IVCQKNGSWSGAIPECNAF 82
           CPK   +    +  ++          + C  GY  +G     +C   G W     +C   
Sbjct: 4   CPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKC--- 60

Query: 83  FFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE 142
                     P  CP   +  NG +        +     + F+CN   +L G ++  CTE
Sbjct: 61  ---------TPRVCPFAGILENGAV----RYTTFEYPNTISFSCNTGFYLNGADSAKCTE 107

Query: 143 TGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKF----FYDPGDHIQVTCNDGYVKPLDITP 197
            G+WS   P C    C  P  P    +   K          D     C   +     +  
Sbjct: 108 EGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHA----MFG 163

Query: 198 TSGPYCQSDGTWSLDIPHCT 217
                C + G W+  +P C 
Sbjct: 164 NDTITCTTHGNWT-KLPECR 182

>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A Length = 319

 Score = 81.5 bits (201), Expect = 1e-18
 Identities = 36/164 (21%), Positives = 57/164 (34%), Gaps = 26/164 (15%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
           + G W+  +P C+++ CP     +N ++    +    Y+  A F C  GY L GP +I C
Sbjct: 171 THGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIEC 229

Query: 67  QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHL------IEDPTGGPYRVGA 120
            K G+WS  +P C A              C VP              I++        G 
Sbjct: 230 TKLGNWSA-MPSCKA-------------SCKVPVKKATVVYQGERVKIQEKFKNGMLHGD 275

Query: 121 ILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYPGEP 163
            + F C ++              G      P+C K   +     
Sbjct: 276 KVSFFCKNKEKKCSYTEDAQCIDGTIE--VPKCFKEHTDASDVK 317

>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A Length = 277

 Score =  132 bits (333), Expect = 5e-38
 Identities = 54/215 (25%), Positives = 78/215 (36%), Gaps = 26/215 (12%)

Query: 10  QGQWSG--EVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
           +G+W     +  CQ+  C           TL   N    G    + C+ GYQL G  +  
Sbjct: 55  KGEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYR 114

Query: 66  CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED--PTGGPYRVGAILQ 123
                 W+  IP C              V C     P NG ++         Y  G  ++
Sbjct: 115 ECDTDGWTNDIPICE------------VVKCLPVTAPENGKIVSSAMEPDREYHFGQAVR 162

Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQ 182
           F CN  + + G+E + C++ G WS+  P+C    C+ P    NG  I  K  Y   +  Q
Sbjct: 163 FVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPDVI-NGSPISQKIIYKENERFQ 221

Query: 183 VTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
             CN GY      +      C   G W   +P C 
Sbjct: 222 YKCNMGYE----YSERGDAVCTESG-WR-PLPSCE 250

>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A Length = 277

 Score =  110 bits (277), Expect = 9e-30
 Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 24/210 (11%)

Query: 14  SGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG-SW 72
           +     C ++   +   E    +  +Q       AI++C  GY+  G   +VC+K     
Sbjct: 2   AQPAEDCNELPPRRNT-EILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCRKGEWVA 60

Query: 73  SGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHL 132
              + +C                C  P     G       G  +  G    + CN+ + L
Sbjct: 61  LNPLRKC------------QKRPCGHPGDTPFGT-FTLTGGNVFEYGVKAVYTCNEGYQL 107

Query: 133 LGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKII----PLKFFYDPGDHIQVTCND 187
           LGE      +T  W+   P C+  +C     P+NGKI+         Y  G  ++  CN 
Sbjct: 108 LGEINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNS 167

Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           GY   ++       +C  DG WS + P C 
Sbjct: 168 GYK--IEGDEEM--HCSDDGFWSKEKPKCV 193

>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A Length = 277

 Score = 99.6 bits (248), Expect = 1e-25
 Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 23/168 (13%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLT----LVEQNNTYRGHAIFQCSWGYQLKGPPD 63
               W+ ++P C+ + C  +   EN  +       ++   +     F C+ GY+++G  +
Sbjct: 117 DTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEE 176

Query: 64  IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
           + C  +G WS   P+C              + C  P +     +        Y+     Q
Sbjct: 177 MHCSDDGFWSKEKPKC------------VEISCKSPDVINGSPI---SQKIIYKENERFQ 221

Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYP-GEPQNGKIIP 170
           + CN  +        VCTE+G W    P C+     P  +  + + + 
Sbjct: 222 YKCNMGYEYSERGDAVCTESG-WR-PLPSCEEARGGPEQKLISEEDLN 267

>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A Length = 254

 Score =  131 bits (331), Expect = 6e-38
 Identities = 49/218 (22%), Positives = 75/218 (34%), Gaps = 31/218 (14%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLT---LVEQNNTYRGHAIFQCSWGYQLKGPPD--IV 65
            QWS     C +       + +  L    + +          ++C  GY+ +      + 
Sbjct: 53  SQWSDIEEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLT 112

Query: 66  CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           C +N  WS A+  C                CP P    NG +      G    GA + F+
Sbjct: 113 CLQNLKWSTAVEFCK------------KKSCPNPGEIRNGQID---VPGGILFGATISFS 157

Query: 126 CNDRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHI 181
           CN  + L G  +  C  +G   +WS   P C+   C  P +  NG I   +  Y     +
Sbjct: 158 CNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSV 217

Query: 182 QVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHC 216
              CN G+     +      YC     +G WS   P C
Sbjct: 218 TYACNKGFT----MIGEHSIYCTVNNDEGEWSGPPPEC 251

>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A Length = 254

 Score =  101 bits (254), Expect = 1e-26
 Identities = 42/154 (27%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
              +WS  V  C++  CP    + N  +  V     +     F C+ GY+L G     C 
Sbjct: 115 QNLKWSTAVEFCKKKSCPNPGEIRNGQID-VPGGILFGATISFSCNTGYKLFGSTSSFCL 173

Query: 68  KNGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
            +GS   WS  +PEC              ++CP P    NG +        Y     + +
Sbjct: 174 ISGSSVQWSDPLPEC------------REIYCPAPPQIDNGIIQ--GERDHYGYRQSVTY 219

Query: 125 ACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA 155
           ACN    ++GE +I CT   + G WS  PP C+ 
Sbjct: 220 ACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 253

>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A Length = 254

 Score =  101 bits (252), Expect = 3e-26
 Identities = 44/203 (21%), Positives = 71/203 (34%), Gaps = 29/203 (14%)

Query: 25  CPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD--IVCQKNGSWSGAIPECN 80
           C     V N    L  + +      I ++C   +         ++C K   WS     C 
Sbjct: 4   CGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC- 62

Query: 81  AFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHLLGEET-- 137
                          C VP    +  L     T   + VG ++++ C   +      +  
Sbjct: 63  ------------NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPK 110

Query: 138 IVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDIT 196
           + C +  +WS A   CK   C  PGE +NG+I         G  I  +CN GY     + 
Sbjct: 111 LTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGYK----LF 165

Query: 197 PTSGPYCQSDGT---WSLDIPHC 216
            ++  +C   G+   WS  +P C
Sbjct: 166 GSTSSFCLISGSSVQWSDPLPEC 188

>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A Length = 254

 Score = 86.5 bits (214), Expect = 9e-21
 Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRC 153
           C +P    N           +    ++ + C +    +   +++++C +  +WS     C
Sbjct: 4   CGLPPDVPNAQPA-LEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 62

Query: 154 KARCEYPGEPQNGKII---PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
              CE P    +  +      + ++  G  ++  C  GY    + + +    C  +  WS
Sbjct: 63  NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYR--REPSLSPKLTCLQNLKWS 120

Query: 211 LDIPHCT 217
             +  C 
Sbjct: 121 TAVEFCK 127

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score =  135 bits (342), Expect = 4e-37
 Identities = 54/225 (24%), Positives = 74/225 (32%), Gaps = 31/225 (13%)

Query: 9   SQGQWSG---------EVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQL 58
           S G WS              C+ I CP+    EN                 F C  GY L
Sbjct: 53  STGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTL 112

Query: 59  KGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
           +G  +  CQ NG WSG    C+              +C  P +P+         G  YR+
Sbjct: 113 RGSANRTCQVNGRWSGQTAICDN----------GAGYCSNPGIPIGTRK----VGSQYRL 158

Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEY--PGEPQNGKIIPLKFFYD 176
              + + C+    L G +   C E G WS   P C+    Y  P E     +  L    +
Sbjct: 159 EDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIE 218

Query: 177 PGDHIQVTCNDGYVKPLDITPT-SGP---YCQSDGTWSLDIPHCT 217
            G   +     G  +   I    SG    Y   DG+ S+     T
Sbjct: 219 -GVDAEDGHGPGEQQKRKIVLDPSGSMNIYLVLDGSGSIGASDFT 262

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score =  118 bits (297), Expect = 5e-31
 Identities = 49/216 (22%), Positives = 66/216 (30%), Gaps = 37/216 (17%)

Query: 13  WSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSW 72
           WS   P      C    VE    +   +         + C  G+         C+  GSW
Sbjct: 3   WSLARPQGS---CSLEGVEIKGGSF--RLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSW 57

Query: 73  SGA---------IPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
           S             EC              +HCP P    NG     P    Y V   + 
Sbjct: 58  STLKTQDQKTVRKAEC------------RAIHCPRPHDFENGEYW--PRSPYYNVSDEIS 103

Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPLKFFYDPGDH 180
           F C D + L G     C   GRWS     C      C  PG P   + +  ++     D 
Sbjct: 104 FHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRL--EDS 161

Query: 181 IQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           +   C+ G      +  +    CQ  G+WS   P C
Sbjct: 162 VTYHCSRGLT----LRGSQRRTCQEGGSWSGTEPSC 193

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 89.8 bits (222), Expect = 6e-21
 Identities = 36/157 (22%), Positives = 57/157 (36%), Gaps = 34/157 (21%)

Query: 72  WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
           WS A P+ +               C +  + + G      +    + G  L++ C    +
Sbjct: 3   WSLARPQGS---------------CSLEGVEIKGG-----SFRLLQEGQALEYVCPSGFY 42

Query: 132 LLGEETIVCTETGRWSRAP---------PRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHI 181
               +T  C  TG WS              C+A  C  P + +NG+  P   +Y+  D I
Sbjct: 43  PYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEI 102

Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
              C DGY     +  ++   CQ +G WS     C N
Sbjct: 103 SFHCYDGYT----LRGSANRTCQVNGRWSGQTAICDN 135

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 50.1 bits (119), Expect = 2e-07
 Identities = 20/81 (24%), Positives = 24/81 (29%), Gaps = 9/81 (11%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGH-AIFQCSWGYQLK--------GP 61
           G WSG  P+CQ         E     L     T  G  A      G Q K        G 
Sbjct: 184 GSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGVDAEDGHGPGEQQKRKIVLDPSGS 243

Query: 62  PDIVCQKNGSWSGAIPECNAF 82
            +I    +GS S    +    
Sbjct: 244 MNIYLVLDGSGSIGASDFTGA 264

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F* Length = 741

 Score = 43.2 bits (101), Expect = 3e-05
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 9/66 (13%)

Query: 145 RWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ 204
            WS A P+    C   G    G    L      G  ++  C  G+       P     C+
Sbjct: 2   PWSLARPQG--SCSLEGVEIKGGSFRL---LQEGQALEYVCPSGFY----PYPVQTRTCR 52

Query: 205 SDGTWS 210
           S G+WS
Sbjct: 53  STGSWS 58

>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A Length = 244

 Score =  128 bits (324), Expect = 5e-37
 Identities = 48/219 (21%), Positives = 80/219 (36%), Gaps = 28/219 (12%)

Query: 4   PVFRVSQGQWSGEVPTCQQIICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP 62
           P++    G        C +  CP    ++N  L +      +     + C+ GY L G  
Sbjct: 46  PIYAKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYHLIGES 103

Query: 63  DIVCQK----NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
              C+     +  W+   P C              V C  P    NG          Y  
Sbjct: 104 KSYCELGSTGSMVWNPEAPICE------------SVKCQSPPSISNGRHN--GYEDFYTD 149

Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDP 177
           G+++ ++CN  + L+G   ++C+  G WS  PP C+  +C +P           K  Y  
Sbjct: 150 GSVVTYSCNSGYSLIGNSGVLCSG-GEWS-DPPTCQIVKCPHPTISNGYLSSGFKRSYSY 207

Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
            D++   C  GY     ++ +S   C    TW  ++P C
Sbjct: 208 NDNVDFKCKYGYK----LSGSSSSTCSPGNTWKPELPKC 242

>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A Length = 244

 Score =  111 bits (280), Expect = 1e-30
 Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 28/203 (13%)

Query: 20  CQQIICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPE 78
           C     P  +  +N   T    N        + C  GY+ +    I  +  G+      +
Sbjct: 2   CTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 61

Query: 79  CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETI 138
           C                CP P    NG L      G    G+ + ++CN  +HL+GE   
Sbjct: 62  C------------IKRRCPSPRDIDNGQL----DIGGVDFGSSITYSCNSGYHLIGESKS 105

Query: 139 VC----TETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPL 193
            C    T +  W+   P C++ +C+ P    NG+    + FY  G  +  +CN GY    
Sbjct: 106 YCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYS--- 162

Query: 194 DITPTSGPYCQSDGTWSLDIPHC 216
            +   SG  C   G WS D P C
Sbjct: 163 -LIGNSGVLCS-GGEWS-DPPTC 182

>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A Length = 244

 Score = 44.5 bits (105), Expect = 8e-06
 Identities = 12/61 (19%), Positives = 17/61 (27%), Gaps = 4/61 (6%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
                + +N         Y+ GD I+  C  GY            Y +  GT       C
Sbjct: 7   RPINMKFKNSVETDANANYNIGDTIEYLCLPGYR----KQKMGPIYAKCTGTGWTLFNQC 62

Query: 217 T 217
            
Sbjct: 63  I 63

>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A Length = 290

 Score =  126 bits (317), Expect = 1e-35
 Identities = 48/222 (21%), Positives = 82/222 (36%), Gaps = 32/222 (14%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC---Q 67
             W+     C +  C   +     +  V  +  +     + C+ GY+L G    +C    
Sbjct: 85  SVWTSPQDVCIRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISD 144

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
           ++ +W    P C              + C +P    NG     P    +  G ++ + CN
Sbjct: 145 QSVAWDAEAPIC------------ESIPCEIPPSIPNGDFF-SPNREDFHYGMVVTYQCN 191

Query: 128 D------RHHLLGEETIVCT----ETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFY 175
                    +L+GE +I CT    + G WS  PP+C       P   +N  I+   K  +
Sbjct: 192 TDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLF 251

Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
              D ++  C DG++    +   S  YC+S   W   +P C 
Sbjct: 252 SLRDMVEFRCQDGFM----MKGDSSVYCRSLNRWEPQLPSCA 289

>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A Length = 290

 Score =  106 bits (265), Expect = 6e-28
 Identities = 44/225 (19%), Positives = 68/225 (30%), Gaps = 33/225 (14%)

Query: 9   SQGQWSGEVPTCQQI------ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP 62
                +  +              P      P     E          ++C  GY +K   
Sbjct: 19  GGVHLAVLLLFLSPSTLGQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQF 77

Query: 63  DIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
            I C+ N  W+     C                C  P  P NG +         R G+ +
Sbjct: 78  SITCEVNSVWTSPQDVC------------IRKQCETPLDPQNGIVHV---NTDIRFGSSI 122

Query: 123 QFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFFYDP 177
            + CN+ + L+G  + +C    ++  W    P C++  CE P    NG    P +  +  
Sbjct: 123 TYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHY 182

Query: 178 GDHIQVTCNDGYVKPLDITPTSGP--YCQS----DGTWSLDIPHC 216
           G  +   CN              P  +C S     G WS   P C
Sbjct: 183 GMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQC 227

>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A Length = 290

 Score = 98.9 bits (246), Expect = 3e-25
 Identities = 33/168 (19%), Positives = 54/168 (32%), Gaps = 13/168 (7%)

Query: 51  QCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED 110
           + S      G     C+     +  +   +               CP P L      I  
Sbjct: 2   EASSPLDPVGRLVAFCRGGVHLAVLLLFLSP---------STLGQCPAPPLFPYAKPINP 52

Query: 111 PTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKII 169
                + VG  L++ C    ++  + +I C     W+     C  + CE P +PQNG + 
Sbjct: 53  TDESTFPVGTSLKYECRP-GYIKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVH 111

Query: 170 PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
                   G  I  TCN+GY + +  +            W  + P C 
Sbjct: 112 VNT-DIRFGSSITYTCNEGY-RLIGSSSAMCIISDQSVAWDAEAPICE 157

>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A Length = 290

 Score = 92.8 bits (230), Expect = 7e-23
 Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 25/157 (15%)

Query: 11  GQWSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAI-FQCSWG------YQLKGPP 62
             W  E P C+ I C     + N       + + + G  + +QC+        + L G P
Sbjct: 147 VAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEP 206

Query: 63  DIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
            I C     + G WSG  P+C              ++   P    N   I       + +
Sbjct: 207 SIHCTSIDGQVGVWSGPPPQCI------------ELNKCTPPHVENAV-IVSKNKSLFSL 253

Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA 155
             +++F C D   + G+ ++ C    RW    P C A
Sbjct: 254 RDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCAA 290

>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A Length = 290

 Score = 65.0 bits (158), Expect = 9e-13
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
             G WSG  P C ++       VEN  +    ++  + R    F+C  G+ +KG   + C
Sbjct: 216 QVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYC 275

Query: 67  QKNGSWSGAIPECNA 81
           +    W   +P C A
Sbjct: 276 RSLNRWEPQLPSCAA 290

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens} Length = 381

 Score =  126 bits (318), Expect = 6e-35
 Identities = 49/219 (22%), Positives = 75/219 (34%), Gaps = 31/219 (14%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLT---LVEQNNTYRGHAIFQCSWGYQLKGPPD--IV 65
            QWS     C +       + +  L    + +          ++C  GY+ +      + 
Sbjct: 85  SQWSDIEEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLT 144

Query: 66  CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           C +N  WS A+  C                CP P    NG +      G    GA + F+
Sbjct: 145 CLQNLKWSTAVEFCK------------KKSCPNPGEIRNGQI---DVPGGILFGATISFS 189

Query: 126 CNDRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHI 181
           CN  + L G  +  C  +G   +WS   P C+   C  P +  NG I   +  Y     +
Sbjct: 190 CNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSV 249

Query: 182 QVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHCT 217
              CN G+     +      YC     +G WS   P C 
Sbjct: 250 TYACNKGFT----MIGEHSIYCTVNNDEGEWSGPPPECR 284

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens} Length = 381

 Score =  110 bits (277), Expect = 5e-29
 Identities = 45/215 (20%), Positives = 69/215 (32%), Gaps = 32/215 (14%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
              +WS  V  C++  CP           V     +     F C+ GY+L G     C  
Sbjct: 147 QNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLI 206

Query: 69  NGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           +GS   WS  +PEC              ++CP P    NG +        Y     + +A
Sbjct: 207 SGSSVQWSDPLPEC------------REIYCPAPPQIDNGIIQ--GERDHYGYRQSVTYA 252

Query: 126 CNDRHHLLGEETIVCT---ETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQ 182
           CN    ++GE +I CT   + G WS  PP C+ +      P                 + 
Sbjct: 253 CNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGKSLTSKVPPT---------VQKPTTVN 303

Query: 183 VTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           V   +          T+      +   +   P   
Sbjct: 304 VPTTEVSPTS---QKTTTKTTTPNAQATRSTPVSR 335

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens} Length = 381

 Score = 97.4 bits (242), Expect = 4e-24
 Identities = 45/210 (21%), Positives = 72/210 (34%), Gaps = 28/210 (13%)

Query: 17  VPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD--IVCQKNGSWS 73
           +P   Q       V N    L  + +      I ++C   +         ++C K   WS
Sbjct: 29  LPAVWQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWS 88

Query: 74  GAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHL 132
                C                C VP    +  L     T   + VG ++++ C   +  
Sbjct: 89  DIEEFC-------------NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRR 135

Query: 133 LG--EETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
                  + C +  +WS A   CK   C  PGE +NG+I         G  I  +CN GY
Sbjct: 136 EPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGY 194

Query: 190 VKPLDITPTSGPYCQSDGT---WSLDIPHC 216
                +  ++  +C   G+   WS  +P C
Sbjct: 195 K----LFGSTSSFCLISGSSVQWSDPLPEC 220

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens} Length = 381

 Score = 84.3 bits (208), Expect = 2e-19
 Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 34/187 (18%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           S  QWS  +P C++I CP    ++N  +     +  YR    + C+ G+ + G   I C 
Sbjct: 209 SSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCT 268

Query: 68  ---KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
                G WSG  PEC              +   VP        +  PT            
Sbjct: 269 VNNDEGEWSGPPPECRG----------KSLTSKVPPTVQKPTTVNVPT------------ 306

Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQV 183
                       T   T   + +R+ P  +  +  +   P  G           G    +
Sbjct: 307 -TEVSPTSQKTTTKTTTPNAQATRSTPVSRTTKHFHETTPNKGSGTT------SGTTRLL 359

Query: 184 TCNDGYV 190
           + +  + 
Sbjct: 360 SGHTCFT 366

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens} Length = 381

 Score = 82.0 bits (202), Expect = 1e-18
 Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRC 153
           C +P    N           +    ++ + C +    +   +++++C +  +WS     C
Sbjct: 36  CGLPPDVPNAQPA-LEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 94

Query: 154 KARCEYPGEPQNGKII---PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
              CE P    +  +      + ++  G  ++  C  GY    + + +    C  +  WS
Sbjct: 95  NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYR--REPSLSPKLTCLQNLKWS 152

Query: 211 LDIPHCT 217
             +  C 
Sbjct: 153 TAVEFCK 159

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens} Length = 381

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 16/133 (12%), Positives = 26/133 (19%), Gaps = 28/133 (21%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
            +G+WSG  P C+           P +      N                +         
Sbjct: 272 DEGEWSGPPPECRGKSLT--SKVPPTVQKPTTVNVP------TTEVSPTSQKTTTKTTTP 323

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
           N   + + P                        P  G             G     + + 
Sbjct: 324 NAQATRSTPVSR------------TTKHFHETTPNKGSG--------TTSGTTRLLSGHT 363

Query: 129 RHHLLGEETIVCT 141
              L G    + T
Sbjct: 364 CFTLTGLLGTLVT 376

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  129 bits (325), Expect = 1e-34
 Identities = 50/216 (23%), Positives = 83/216 (38%), Gaps = 21/216 (9%)

Query: 9   SQGQWSGEVPTCQQ----IICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD 63
             G WSG  P C +      CP   V++ Y      +       +   C+ G+ + G   
Sbjct: 748 GHGSWSGPSPQCLRSPPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRV 807

Query: 64  IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
           I C  + +W   +P C              + CP P    NG+         +  G  + 
Sbjct: 808 IRCHTDNTWVPGVPTCIKK---------AFIGCPPPPKTPNGNHT-GGNIARFSPGMSIL 857

Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFYDPGDHI 181
           ++C+  + L+GE  ++CT  G WS+  P CK   C  P +    +     +  Y  G  +
Sbjct: 858 YSCDQGYLLVGEALLLCTHEGTWSQPAPHCKEVNCSSPADMDGIQKGLEPRKMYQYGAVV 917

Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            + C DGY+    +  +    CQSD  W+  +  C 
Sbjct: 918 TLECEDGYM----LEGSPQSQCQSDHQWNPPLAVCR 949

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  121 bits (304), Expect = 7e-32
 Identities = 48/214 (22%), Positives = 72/214 (33%), Gaps = 19/214 (8%)

Query: 9   SQGQWSGEVPTCQQII----CPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDI 64
             G W    P C+       CP+ +V   Y         +     F C   + + G   +
Sbjct: 51  VDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSV 110

Query: 65  VCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
            CQ N  W           F        P+ CP   +  NGH   +   G    G  + +
Sbjct: 111 WCQANNMWGPTRLPTCVSVF--------PLECPALPMIHNGHHTSEN-VGSIAPGLSVTY 161

Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQV 183
           +C   + L+GE+ I C  +G+WS  PP C+  RC+  G   NGK+         G     
Sbjct: 162 SCESGYLLVGEKIINCLSSGKWSAVPPTCEEARCKSLGRFPNGKVKE-PPILRVGVTANF 220

Query: 184 TCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            C++GY     +       C   G          
Sbjct: 221 FCDEGYR----LQGPPSSRCVIAGQGVAWTKMPV 250

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  119 bits (299), Expect = 4e-31
 Identities = 56/220 (25%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 9   SQGQWSGEVPTCQQIICPK-IVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
             G W  ++P C+ I C    V+ N   T +   N  Y     ++C  G+ L G   + C
Sbjct: 683 ENGIWFKKIPLCKVIHCHPPPVIVNGKHTGMMAENFLYGNEVSYECDQGFYLLGEKKLQC 742

Query: 67  Q----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
           +     +GSWSG  P+C                CP P +     L  + T   Y    I+
Sbjct: 743 RSDSKGHGSWSGPSPQCLRSP--------PVTRCPNPEVKHGYKL--NKTHSAYSHNDIV 792

Query: 123 QFACNDRHHLLGEETIVCTETGRWSRAPPRCKA----RCEYPGEPQNGKIIPLKF-FYDP 177
              CN    + G   I C     W    P C       C  P +  NG         + P
Sbjct: 793 YVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCIKKAFIGCPPPPKTPNGNHTGGNIARFSP 852

Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           G  I  +C+ GY+    +   +   C  +GTWS   PHC 
Sbjct: 853 GMSILYSCDQGYL----LVGEALLLCTHEGTWSQPAPHCK 888

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  116 bits (291), Expect = 4e-30
 Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 28/212 (13%)

Query: 11  GQWSGEVPT----CQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
           G WSG  P        + CP   +    +   +++       + F C +G+ LKG   I 
Sbjct: 313 GTWSGPAPRCELSTSAVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIR 372

Query: 66  CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           C   G+W  + P C                C  P   LNG   ED     +  G  ++++
Sbjct: 373 CNAQGTWEPSAPVC-------------EKECQAPPNILNGQ-KEDRHMVRFDPGTSIKYS 418

Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
           CN  + L+GEE+I CT  G W+   P+CK   CE  G     K             +  +
Sbjct: 419 CNPGYVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQLLTKPQH----QFVRPDVNSS 474

Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C +GY     ++ +    CQ    W ++I  C
Sbjct: 475 CGEGYK----LSGSVYQECQGTIPWFMEIRLC 502

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  115 bits (290), Expect = 5e-30
 Identities = 55/221 (24%), Positives = 84/221 (38%), Gaps = 27/221 (12%)

Query: 10  QGQWSGEVPTCQQIICPKI--VVENPYLTLVEQNNTYRGHAIFQC------SWGYQLKGP 61
           QG    ++P C++I CP    ++   ++     N +Y     + C         + L G 
Sbjct: 241 QGVAWTKMPVCEEIFCPSPPPILNGRHIGNSLANVSYGSIVTYTCDPDPEEGVNFILIGE 300

Query: 62  PDIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYR 117
             + C     K G+WSG  P C            + V CP P +     +        Y 
Sbjct: 301 STLRCTVDSQKTGTWSGPAPRCELST--------SAVQCPHPQILRGRMVS--GQKDRYT 350

Query: 118 VGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYD 176
               + FAC     L G + I C   G W  + P C+  C+ P    NG+        +D
Sbjct: 351 YNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCEKECQAPPNILNGQKEDRHMVRFD 410

Query: 177 PGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           PG  I+ +CN GYV    +       C S+G W+  +P C 
Sbjct: 411 PGTSIKYSCNPGYV----LVGEESIQCTSEGVWTPPVPQCK 447

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  112 bits (281), Expect = 9e-29
 Identities = 47/218 (21%), Positives = 66/218 (30%), Gaps = 27/218 (12%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
           +QG W    P C++       + N             G +I + C+ GY L G   I C 
Sbjct: 375 AQGTWEPSAPVCEKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQCT 434

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
             G W+  +P+C                C      L              V   +  +C 
Sbjct: 435 SEGVWTPPVPQCK------------VAACEATGRQLLTK------PQHQFVRPDVNSSCG 476

Query: 128 DRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFF-YDPGDHIQVTC 185
           + + L G     C  T  W      CK   C  P    NG         +  G  +  TC
Sbjct: 477 EGYKLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVTYTC 536

Query: 186 NDGYVKPLDI------TPTSGPYCQSDGTWSLDIPHCT 217
           N G  + ++       T       Q  GTWS   P C 
Sbjct: 537 NPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCK 574

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  110 bits (277), Expect = 3e-28
 Identities = 47/218 (21%), Positives = 76/218 (34%), Gaps = 28/218 (12%)

Query: 9   SQGQWSGEVPTCQ----QIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPD 63
            +G WSG  P C+     + C  + + N Y    ++   +    + F+C  G+ LKG   
Sbjct: 562 ERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQ 621

Query: 64  IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
           I C+ + +W   IP C                C      L                 ++ 
Sbjct: 622 IRCKADNTWDPEIPVCE------------KETCQHVRQSLQELPA-------GSRVELVN 662

Query: 124 FACNDRHHLLGEETIVCT--ETGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFFYDPGD 179
            +C D + L G    +C   E G W +  P CK   C  P    NGK    +   +  G+
Sbjct: 663 TSCQDGYQLTGHAYQMCQDAENGIWFKKIPLCKVIHCHPPPVIVNGKHTGMMAENFLYGN 722

Query: 180 HIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            +   C+ G+    +         +  G+WS   P C 
Sbjct: 723 EVSYECDQGFYLLGEKKLQCRSDSKGHGSWSGPSPQCL 760

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  101 bits (252), Expect = 6e-25
 Identities = 41/206 (19%), Positives = 64/206 (31%), Gaps = 26/206 (12%)

Query: 23  IICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAIP 77
           I C     + N  ++             + CS  ++L G   ++C    + +G+W    P
Sbjct: 1   ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 60

Query: 78  ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEET 137
           +C          F     CP P +P    +       PYR G  + FAC     + G ++
Sbjct: 61  KCEY--------FNKYSSCPEPIVPGGYKI---RGSTPYRHGDSVTFACKTNFSMNGNKS 109

Query: 138 IVCTETGRWSRAPPRCKARCE-----YPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVK 191
           + C     W                       NG           PG  +  +C  GY+ 
Sbjct: 110 VWCQANNMWGPTRLPTCVSVFPLECPALPMIHNGHHTSENVGSIAPGLSVTYSCESGYL- 168

Query: 192 PLDITPTSGPYCQSDGTWSLDIPHCT 217
              +       C S G WS   P C 
Sbjct: 169 ---LVGEKIINCLSSGKWSAVPPTCE 191

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score =  100 bits (251), Expect = 8e-25
 Identities = 44/220 (20%), Positives = 65/220 (29%), Gaps = 30/220 (13%)

Query: 11  GQWSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAI-FQC------SWGYQLKGPP 62
             W  E+  C++I CP   V+ N   T     +   G  + + C         + L G  
Sbjct: 493 IPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVTYTCNPGPERGVEFSLIGES 552

Query: 63  DIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
            I C     + G+WSG  P C              V C    +     +       PY  
Sbjct: 553 TIRCTSNDQERGTWSGPAPLCKLSL--------LAVQCSHVHIANGYKI--SGKEAPYFY 602

Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFYDP 177
              + F C     L G   I C     W    P C+   C++  +               
Sbjct: 603 NDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQSLQELPA-----GSR 657

Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            + +  +C DGY                +G W   IP C 
Sbjct: 658 VELVNTSCQDGYQLTGHAYQMC--QDAENGIWFKKIPLCK 695

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score = 99.4 bits (247), Expect = 3e-24
 Identities = 49/225 (21%), Positives = 74/225 (32%), Gaps = 31/225 (13%)

Query: 9   SQGQWSGEVPTCQQIICPKI-----VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPP 62
           +   W          + P       ++ N + T     +   G ++ + C  GY L G  
Sbjct: 114 ANNMWGPTRLPTCVSVFPLECPALPMIHNGHHTSENVGSIAPGLSVTYSCESGYLLVGEK 173

Query: 63  DIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAIL 122
            I C  +G WS   P C                C       NG + E P     RVG   
Sbjct: 174 IINCLSSGKWSAVPPTCE------------EARCKSLGRFPNGKVKEPPI---LRVGVTA 218

Query: 123 QFACNDRHHLLGEETIVCTETGR---WSRAPPRCKARCEYPGEPQNGKIIPLKF-FYDPG 178
            F C++ + L G  +  C   G+   W++ P   +  C  P    NG+ I         G
Sbjct: 219 NFFCDEGYRLQGPPSSRCVIAGQGVAWTKMPVCEEIFCPSPPPILNGRHIGNSLANVSYG 278

Query: 179 DHIQVTCNDGYVKPLDITPTSGP--YCQSD----GTWSLDIPHCT 217
             +  TC+    + ++          C  D    GTWS   P C 
Sbjct: 279 SIVTYTCDPDPEEGVNFILIGESTLRCTVDSQKTGTWSGPAPRCE 323

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens} Length = 951

 Score = 98.7 bits (245), Expect = 5e-24
 Identities = 35/151 (23%), Positives = 50/151 (33%), Gaps = 18/151 (11%)

Query: 11  GQWSGEVPTCQQIICPKI----VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIV 65
             W   VPTC +             N   T         G +I + C  GY L G   ++
Sbjct: 814 NTWVPGVPTCIKKAFIGCPPPPKTPNGNHTGGNIARFSPGMSILYSCDQGYLLVGEALLL 873

Query: 66  CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           C   G+WS   P C              V+C  PA               Y+ GA++   
Sbjct: 874 CTHEGTWSQPAPHCK------------EVNCSSPADMDGIQ-KGLEPRKMYQYGAVVTLE 920

Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKAR 156
           C D + L G     C    +W+     C++R
Sbjct: 921 CEDGYMLEGSPQSQCQSDHQWNPPLAVCRSR 951

>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus} Length = 551

 Score =  127 bits (321), Expect = 2e-34
 Identities = 49/224 (21%), Positives = 84/224 (37%), Gaps = 35/224 (15%)

Query: 11  GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC--- 66
             W+     C +  C      EN  +  V     +     + C+ GY+L G    VC   
Sbjct: 50  STWTSAEDKCIRKQCKTPSDPENGLVH-VHTGIEFGSRINYTCNQGYRLIGSSSAVCVIT 108

Query: 67  QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
            ++  W    P C              + C +P    NG      T   +  G ++ + C
Sbjct: 109 DQSVDWDTEAPIC------------EWIPCEIPPGIPNGDFF-SSTREDFHYGMVVTYRC 155

Query: 127 N------DRHHLLGEETIVCT----ETGRWSRAPPRCKA--RCEYPGEPQNGKII-PLKF 173
           N         +L+GE ++ CT    E G WS  PP+C    +C  P   +N  ++   + 
Sbjct: 156 NTDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRS 215

Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            +   D ++  C+ G++    +   S  +CQS   W  ++P C 
Sbjct: 216 LFSLRDIVEFRCHPGFI----MKGASSVHCQSLNKWEPELPSCF 255

>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus} Length = 551

 Score =  119 bits (300), Expect = 1e-31
 Identities = 50/227 (22%), Positives = 83/227 (36%), Gaps = 31/227 (13%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKG 60
               W  E P C+ I C     + N       + +  Y     ++C+        + L G
Sbjct: 110 QSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVG 169

Query: 61  PPDIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
            P + C  N    G WSG  P+C                C  P    N   +       +
Sbjct: 170 EPSLYCTSNDGEIGVWSGPPPQCIE-----------LNKCTPPPYVENAV-MLSENRSLF 217

Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR--CEYPGEPQNGKI-IPLKF 173
            +  I++F C+    + G  ++ C    +W    P C     C  P E    +  + +K 
Sbjct: 218 SLRDIVEFRCHPGFIMKGASSVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKK 277

Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT 220
            Y  G+++ + C DGY   L+ +  S   CQSDG+W+  +  C +  
Sbjct: 278 EYYYGENVTLECEDGY--TLEGSSQS--QCQSDGSWNPLLAKCVSRL 320

>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus} Length = 551

 Score =  103 bits (257), Expect = 9e-26
 Identities = 39/207 (18%), Positives = 55/207 (26%), Gaps = 16/207 (7%)

Query: 9   SQGQWSGEVPTCQQII--CPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIV 65
             G WSG  P C ++    P   VEN  +    ++  + R    F+C  G+ +KG   + 
Sbjct: 181 EIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPGFIMKGASSVH 240

Query: 66  CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           CQ    W   +P C                       ++G          Y  G  +   
Sbjct: 241 CQSLNKWEPELPSCF------------KGVICRLPQEMSGFQKGLGMKKEYYYGENVTLE 288

Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
           C D + L G     C   G W+              E              P        
Sbjct: 289 CEDGYTLEGSSQSQCQSDGSWNPLLA-KCVSRLADPEVPRDCGCKPCICTVPEVSSVFIF 347

Query: 186 NDGYVKPLDITPTSGPYCQSDGTWSLD 212
                  L IT T    C        D
Sbjct: 348 PPKPKDVLTITLTPKVTCVVVDISKDD 374

>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus} Length = 551

 Score =  101 bits (252), Expect = 4e-25
 Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 29/204 (14%)

Query: 26  PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFF 85
            ++    P     E       + +++C  GY +K    I C+++ +W+ A  +C      
Sbjct: 7   SQLPSAKPINLTDESMFPIGTYLLYECLPGY-IKRQFSITCKQDSTWTSAEDKC------ 59

Query: 86  FFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---E 142
                     C  P+ P NG +           G+ + + CN  + L+G  + VC    +
Sbjct: 60  ------IRKQCKTPSDPENGLVH---VHTGIEFGSRINYTCNQGYRLIGSSSAVCVITDQ 110

Query: 143 TGRWSRAPPRCKA-RCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSG 200
           +  W    P C+   CE P    NG      +  +  G  +   CN             G
Sbjct: 111 SVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFN-LVG 169

Query: 201 P---YCQSD----GTWSLDIPHCT 217
               YC S+    G WS   P C 
Sbjct: 170 EPSLYCTSNDGEIGVWSGPPPQCI 193

>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus} Length = 551

 Score = 85.1 bits (210), Expect = 2e-19
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 12/128 (9%)

Query: 95  HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
           HCP P+   +   I       + +G  L + C    ++  + +I C +   W+ A  +C 
Sbjct: 2   HCPAPSQLPSAKPINLTDESMFPIGTYLLYECLPG-YIKRQFSITCKQDSTWTSAEDKCI 60

Query: 155 AR-CEYPGEPQNGKIIPLK-FFYDPGDHIQVTCNDGYVKPLDITPTSGPYC---QSDGTW 209
            + C+ P +P+NG +       +  G  I  TCN GY     +  +S   C        W
Sbjct: 61  RKQCKTPSDPENGLVHVHTGIEF--GSRINYTCNQGYR----LIGSSSAVCVITDQSVDW 114

Query: 210 SLDIPHCT 217
             + P C 
Sbjct: 115 DTEAPICE 122

>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus} Length = 320

 Score =  120 bits (303), Expect = 3e-33
 Identities = 48/222 (21%), Positives = 82/222 (36%), Gaps = 32/222 (14%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC---Q 67
             W+     C +  C   +     +  V  +  +     + C+ GY+L G    +C    
Sbjct: 52  SVWTSPQDVCIRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISD 111

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
           ++ +W    P C              + C +P    NG     P    +  G ++ + CN
Sbjct: 112 QSVAWDAEAPIC------------ESIPCEIPPSIPNGDFFS-PNREDFHYGMVVTYQCN 158

Query: 128 ------DRHHLLGEETIVCT----ETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFY 175
                    +L+GE +I CT    + G WS  PP+C       P   +N  I+   K  +
Sbjct: 159 TDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLF 218

Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
              D ++  C DG++    +   S  YC+S   W   +P C 
Sbjct: 219 SLRDMVEFRCQDGFM----MKGDSSVYCRSLNRWEPQLPSCF 256

>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus} Length = 320

 Score =  118 bits (298), Expect = 2e-32
 Identities = 48/226 (21%), Positives = 78/226 (34%), Gaps = 36/226 (15%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKG 60
               W  E P C+ I C     + N       + +  Y     +QC+        + L G
Sbjct: 112 QSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVG 171

Query: 61  PPDIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
            P I C     + G WSG  P+C              ++   P    N  ++       +
Sbjct: 172 EPSIHCTSIDGQVGVWSGPPPQCI------------ELNKCTPPHVENAVIVS-KNKSLF 218

Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR---CEYPGEPQNGKIIPLKF 173
            +  +++F C D   + G+ ++ C    RW    P C        + GE  NG +   + 
Sbjct: 219 SLRDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCFKVKSCGAFLGELPNGHVFVPQN 278

Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHC 216
               G  +   CN GY     +   S  +C  DG    W+  +P C
Sbjct: 279 LQ-LGAKVTFVCNTGYQ----LKGNSSSHCVLDGVESIWNSSVPVC 319

>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus} Length = 320

 Score = 98.9 bits (246), Expect = 6e-25
 Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 18/149 (12%)

Query: 11  GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQK 68
           G WSG  P C ++       VEN  +    ++  + R    F+C  G+ +KG   + C+ 
Sbjct: 185 GVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRS 244

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
              W   +P C                        NGH+         ++GA + F CN 
Sbjct: 245 LNRWEPQLPSCFK----------VKSCGAFLGELPNGHVFV---PQNLQLGAKVTFVCNT 291

Query: 129 RHHLLGEETIVCTETGR---WSRAPPRCK 154
            + L G  +  C   G    W+ + P C+
Sbjct: 292 GYQLKGNSSSHCVLDGVESIWNSSVPVCE 320

>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus} Length = 320

 Score = 95.5 bits (237), Expect = 1e-23
 Identities = 41/181 (22%), Positives = 63/181 (34%), Gaps = 27/181 (14%)

Query: 48  AIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHL 107
             ++C  GY +K    I C+ N  W+     C                C  P  P NG +
Sbjct: 31  LKYECRPGY-IKRQFSITCEVNSVWTSPQDVC------------IRKQCETPLDPQNGIV 77

Query: 108 IEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCKA-RCEYPGEP 163
                    R G+ + + CN+ + L+G  + +C    ++  W    P C++  CE P   
Sbjct: 78  ---HVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSI 134

Query: 164 QNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGP--YCQS----DGTWSLDIPHC 216
            NG    P +  +  G  +   CN              P  +C S     G WS   P C
Sbjct: 135 PNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQC 194

Query: 217 T 217
            
Sbjct: 195 I 195

>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus} Length = 320

 Score = 83.1 bits (205), Expect = 3e-19
 Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
             CP P L      I       + VG  L++ C    ++  + +I C     W+     C
Sbjct: 3   GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRP-GYIKRQFSITCEVNSVWTSPQDVC 61

Query: 154 KAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD 212
             + CE P +PQNG +         G  I  TCN+GY + +  +            W  +
Sbjct: 62  IRKQCETPLDPQNGIVHVNTDIR-FGSSITYTCNEGY-RLIGSSSAMCIISDQSVAWDAE 119

Query: 213 IPHCTNYT 220
            P C +  
Sbjct: 120 APICESIP 127

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score =  123 bits (310), Expect = 1e-32
 Identities = 53/213 (24%), Positives = 76/213 (35%), Gaps = 24/213 (11%)

Query: 11  GQWSGE--VPTCQQIICPKI-VVENPYLTLVEQNNTYRG-HAIFQCSWGYQLKGPPDIVC 66
           G+W     +  CQ+  C           TL   N    G  A++ C+ GYQL G  +   
Sbjct: 51  GEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRE 110

Query: 67  QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED--PTGGPYRVGAILQF 124
                W+  IP C              V C     P NG ++         Y  G  ++F
Sbjct: 111 CDTDGWTNDIPICEV------------VKCLPVTAPENGKIVSSAMEPDREYHFGQAVRF 158

Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
            CN  + + G+E + C++ G WS+  P+C        +  NG  I  K  Y   +  Q  
Sbjct: 159 VCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPDVINGSPISQKIIYKENERFQYK 218

Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           CN GY      +      C   G   L  P C 
Sbjct: 219 CNMGYE----YSERGDAVCTESGWRPL--PSCE 245

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score =  110 bits (275), Expect = 6e-28
 Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 26/214 (12%)

Query: 11   GQWSGEVPTCQQIICPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQKN 69
             +W+G              V+N Y+   + +         +QC   Y++ G  +++C  N
Sbjct: 1017 SRWTGRPTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-N 1075

Query: 70   GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR 129
            G+W+   P+C            +   C  P    NG +   P    Y   + +++ C + 
Sbjct: 1076 GNWTEP-PQCKD----------STGKCGPPPPIDNGDITSFP-LSVYAPASSVEYQCQNL 1123

Query: 130  HHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL------KFFYDPGDHIQV 183
            + L G + I C   G+WS  PP+C   C    E      I L      K +   G+ ++ 
Sbjct: 1124 YQLEGNKRITCRN-GQWS-EPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEF 1181

Query: 184  TCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
             C  GY     ++  S     +     L+ P C 
Sbjct: 1182 VCKRGYR----LSSRSHTLRTTCWDGKLEYPTCA 1211

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score =  108 bits (271), Expect = 2e-27
 Identities = 43/214 (20%), Positives = 75/214 (35%), Gaps = 27/214 (12%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTL----VEQNNTYRGHAIFQCSWGYQLKGPPD 63
               W+ ++P C+ + C  +   EN  +       ++   +     F C+ GY+++G  +
Sbjct: 112 DTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEE 171

Query: 64  IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
           + C  +G WS   P+C              + C  P +     +        Y+     Q
Sbjct: 172 MHCSDDGFWSKEKPKC------------VEISCKSPDVINGSPI---SQKIIYKENERFQ 216

Query: 124 FACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQV 183
           + CN  +        VCTE+G      P C+ +        NG   PL+  +  GD I  
Sbjct: 217 YKCNMGYEYSERGDAVCTESGWRP--LPSCEEKSCDNPYIPNGDYSPLRIKHRTGDEITY 274

Query: 184 TCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            C +G+               +   W    P CT
Sbjct: 275 QCRNGFYPATRGNTA----KCTSTGWI-PAPRCT 303

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score =  101 bits (253), Expect = 4e-25
 Identities = 34/210 (16%), Positives = 57/210 (27%), Gaps = 18/210 (8%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
           +Q  WS  VP  ++   P +  EN Y     +           C  GY L      V   
Sbjct: 357 TQDGWSPAVPCLRKCYFPYL--ENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCM 414

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
              WS   P C              V     +     +     +   Y +    ++ C  
Sbjct: 415 ENGWSP-TPRCI------------RVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKL 461

Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDG 188
            +     ET      G+   +      +        N +      ++   D +   C+DG
Sbjct: 462 GYVTADGETSGSIRCGKDGWSAQPTCIKSCDIPVFMNARTKNDFTWFKLNDTLDYECHDG 521

Query: 189 YVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
           Y      T ++            D+P C  
Sbjct: 522 YES---NTGSTTGSIVCGYNGWSDLPICYE 548

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score =  100 bits (251), Expect = 7e-25
 Identities = 37/211 (17%), Positives = 60/211 (28%), Gaps = 24/211 (11%)

Query: 11  GQWSGEVPTCQ---QIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           G+W  EV       Q+  P   + N +      N          C   Y ++   +I C+
Sbjct: 777 GRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEEITCK 836

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFAC 126
            +G W                     + C  P    +G +     +   Y  G  L + C
Sbjct: 837 -DGRWQSIPLCVE------------KIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTC 883

Query: 127 NDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCN 186
                +  E    C      S  P      C+ P E  +G +  +   Y  G+ +   C 
Sbjct: 884 EGGFRISEENETTCYMGKWSS-PPQCEGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCF 942

Query: 187 DGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           +G+                   WS   P C 
Sbjct: 943 EGFG-----IDGPAIAKCLGEKWS-HPPSCI 967

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 96.4 bits (239), Expect = 3e-23
 Identities = 42/213 (19%), Positives = 76/213 (35%), Gaps = 22/213 (10%)

Query: 8   VSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
           V       ++P C +  C    ++   +   +++         F C  G+ + GP  + C
Sbjct: 534 VCGYNGWSDLPICYERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQC 593

Query: 67  QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
              G  S  +P C                C  P   LNG+ +++ T   Y    ++++ C
Sbjct: 594 YHFG-LSPDLPICKE----------QVQSCGPPPELLNGN-VKEKTKEEYGHSEVVEYYC 641

Query: 127 NDRHHLLGEETIVCTETGRWSRAPPRCKAR--CEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
           N R  + G   I C + G W+  P        C    E ++G        Y  GD ++  
Sbjct: 642 NPRFLMKGPNKIQCVD-GEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYYYGDSVEFN 700

Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           C++ +     +       C   G W+  +P C 
Sbjct: 701 CSESFT----MIGHRSITCI-HGVWT-QLPQCV 727

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 95.2 bits (236), Expect = 9e-23
 Identities = 47/204 (23%), Positives = 74/204 (36%), Gaps = 24/204 (11%)

Query: 19  TCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG-SWSGAIP 77
            C ++   +   E    +  +Q       AI++C  GY+  G   +VC+K        + 
Sbjct: 2   DCNELPPRR-NTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNVIMVCRKGEWVALNPLR 60

Query: 78  ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEET 137
           +C                C  P     G       G  +  G    + CN+ + LLGE  
Sbjct: 61  KC------------QKRPCGHPGDTPFGT-FTLTGGNVFEYGVKAVYTCNEGYQLLGEIN 107

Query: 138 IVCTETGRWSRAPPRCKAR-CEYPGEPQNGKII----PLKFFYDPGDHIQVTCNDGYVKP 192
               +T  W+   P C+   C     P+NGKI+         Y  G  ++  CN GY   
Sbjct: 108 YRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYK-- 165

Query: 193 LDITPTSGPYCQSDGTWSLDIPHC 216
           ++       +C  DG WS + P C
Sbjct: 166 IEGDEEM--HCSDDGFWSKEKPKC 187

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 94.8 bits (235), Expect = 1e-22
 Identities = 39/212 (18%), Positives = 63/212 (29%), Gaps = 23/212 (10%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
             G WS E P C +I C    V N      +          ++C+ GY+     D VC +
Sbjct: 176 DDGFWSKEKPKCVEISCKSPDVINGSPISQKIIYKENERFQYKCNMGYEYSERGDAVCTE 235

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
           +G     +P C                C  P +P   +    P    +R G  + + C +
Sbjct: 236 SGWRP--LPSCEE------------KSCDNPYIPNGDYS---PLRIKHRTGDEITYQCRN 278

Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIP----LKFFYDPGDHIQVT 184
             +           +  W  AP      C+YP     G          F    G +    
Sbjct: 279 GFYPATRGNTAKCTSTGWIPAPRCTLKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYY 338

Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C++ +               +   WS  +P  
Sbjct: 339 CDEHFE--TPSGSYWDHIHCTQDGWSPAVPCL 368

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 94.0 bits (233), Expect = 2e-22
 Identities = 36/212 (16%), Positives = 65/212 (30%), Gaps = 25/212 (11%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
            +  WS +    +   C   V  N                 ++C  GY+           
Sbjct: 477 GKDGWSAQPTCIK--SCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYESNTGSTTGSIV 534

Query: 69  NGS-WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
            G      +P C                C +P + ++           Y+VG +L+F+C 
Sbjct: 535 CGYNGWSDLPICY------------ERECELPKIDVHLVPD--RKKDQYKVGEVLKFSCK 580

Query: 128 DRHHLLGEETIVCTETGRWSRAPPRCKA--RCEYPGEPQNGKIIP-LKFFYDPGDHIQVT 184
               ++G  ++ C   G     P   +    C  P E  NG +    K  Y   + ++  
Sbjct: 581 PGFTIVGPNSVQCYHFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYY 640

Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           CN  ++    +   +   C  DG W+      
Sbjct: 641 CNPRFL----MKGPNKIQCV-DGEWTTLPVCI 667

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 92.1 bits (228), Expect = 9e-22
 Identities = 41/219 (18%), Positives = 77/219 (35%), Gaps = 27/219 (12%)

Query: 4    PVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYR--GHAIFQCSWGYQLKGP 61
            P      G+     P+C +  C  +      + + E+ + Y+      + C+  Y++ G 
Sbjct: 950  PAIAKCLGEKWSHPPSCIKTDCLSLPSFENAIPMGEKKDVYKAGEQVTYTCATYYKMDGA 1009

Query: 62   PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAI 121
             ++ C  N  W+G                     C  P    N +++       Y  G  
Sbjct: 1010 SNVTCI-NSRWTGRPTCR-------------DTSCVNPPTVQNAYIVS-RQMSKYPSGER 1054

Query: 122  LQFACNDRHHLLGEETIVCTETGRWSRAPP--RCKARCEYPGEPQNGKIIPL-KFFYDPG 178
            +++ C   + + G+E ++C   G W+  P       +C  P    NG I       Y P 
Sbjct: 1055 VRYQCRSPYEMFGDEEVMCLN-GNWTEPPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPA 1113

Query: 179  DHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
              ++  C + Y     +       C+ +G WS + P C 
Sbjct: 1114 SSVEYQCQNLYQ----LEGNKRITCR-NGQWS-EPPKCL 1146

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 90.2 bits (223), Expect = 5e-21
 Identities = 38/209 (18%), Positives = 66/209 (31%), Gaps = 26/209 (12%)

Query: 11   GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
               S   P C+ + C     + +  +  +  +  Y     ++C  G+ + GP  I     
Sbjct: 901  KWSS--PPQCEGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPA-IAKCLG 957

Query: 70   GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR 129
              WS   P C                C       N   +       Y+ G  + + C   
Sbjct: 958  EKWSHP-PSCI------------KTDCLSLPSFENAIPM-GEKKDVYKAGEQVTYTCATY 1003

Query: 130  HHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDG 188
            + + G   + C    RW+  P      C  P   QN  I+      Y  G+ ++  C   
Sbjct: 1004 YKMDGASNVTCIN-SRWTGRPTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSP 1062

Query: 189  YVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            Y    ++       C  +G W+ + P C 
Sbjct: 1063 Y----EMFGDEEVMCL-NGNWT-EPPQCK 1085

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 89.8 bits (222), Expect = 7e-21
 Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 23/212 (10%)

Query: 10  QGQWSGEVPTCQQIIC---PKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIV 65
               S ++P C++ +    P   + N  +    +    +     + C+  + +KGP  I 
Sbjct: 595 HFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQ 654

Query: 66  CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           C  +G W+                      C       +G      +  PY  G  ++F 
Sbjct: 655 CV-DGEWTTLPVCIVE-----------ESTCGDIPELEHGWAQ--LSSPPYYYGDSVEFN 700

Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
           C++   ++G  +I C   G W++ P           +  N  I+  +             
Sbjct: 701 CSESFTMIGHRSITCIH-GVWTQLPQCVAIDKLKKCKSSNLIIL--EEHLKNKKEFDHNS 757

Query: 186 NDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           N  Y                +G W  ++    
Sbjct: 758 NIRYRCRGKEGWIH--TVCINGRWDPEVNCSM 787

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 88.3 bits (218), Expect = 2e-20
 Identities = 40/213 (18%), Positives = 63/213 (29%), Gaps = 25/213 (11%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
           ++  W   +P+C++  C    + N   + +   +       +QC  G+      +     
Sbjct: 234 TESGWR-PLPSCEEKSCDNPYIPNGDYSPLRIKHRTGDEITYQCRNGFYPATRGNTAKCT 292

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTG--GPYRVGAILQFAC 126
           +  W  A P C                C  P +   G   E+      P  VG    + C
Sbjct: 293 STGWIPA-PRCT------------LKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYC 339

Query: 127 NDRHHLLGEETIVCT--ETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVT 184
           ++                   WS A P    R  Y    +NG        +  G  I V 
Sbjct: 340 DEHFETPSGSYWDHIHCTQDGWSPAVPCL--RKCYFPYLENGYNQNHGRKFVQGKSIDVA 397

Query: 185 CNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           C+ GY  P   T         +  WS   P C 
Sbjct: 398 CHPGYALPKAQTTV----TCMENGWS-PTPRCI 425

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 82.1 bits (202), Expect = 3e-18
 Identities = 40/215 (18%), Positives = 65/215 (30%), Gaps = 30/215 (13%)

Query: 9   SQGQWSGE-VPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC 66
             G+W+   V   ++  C  I  +E+ +  L      Y     F CS  + + G   I C
Sbjct: 656 VDGEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGHRSITC 715

Query: 67  QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
             +G W+  +P+C              +         N            +         
Sbjct: 716 I-HGVWTQ-LPQCV------------AIDKLKKCKSSNLI----ILEEHLKNKKEFDHNS 757

Query: 127 NDRHHLLGEE--TIVCTETGRWSRAPPRCKAR---CEYPGEPQNGKIIPLKFFYDPGDHI 181
           N R+   G+E         GRW        A+   C  P +  N   +     Y  G+ +
Sbjct: 758 NIRYRCRGKEGWIHTVCINGRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKV 817

Query: 182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
            V C + Y+    I       C+ DG W       
Sbjct: 818 SVLCQENYL----IQEGEEITCK-DGRWQSIPLCV 847

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 70.5 bits (172), Expect = 2e-14
 Identities = 32/153 (20%), Positives = 49/153 (32%), Gaps = 22/153 (14%)

Query: 11   GQWSGEVPTCQQII---CPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVC 66
            G W+ E P C+       P   ++N  +T    +         +QC   YQL+G   I C
Sbjct: 1076 GNWT-EPPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITC 1134

Query: 67   QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLI---EDPTGGPYRVGAILQ 123
            + NG WS   P+C                     +  N ++            R G  ++
Sbjct: 1135 R-NGQWSEP-PKCL------------HPCVISREIMENYNIALRWTAKQKLYSRTGESVE 1180

Query: 124  FACNDRHHLLGEETIVCTETGRWSRAPPRCKAR 156
            F C   + L      + T         P C  R
Sbjct: 1181 FVCKRGYRLSSRSHTLRTTCWDGKLEYPTCAKR 1213

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213

 Score = 67.5 bits (164), Expect = 3e-13
 Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 96  CPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAP-PRC 153
           C       N  ++    +   Y  G    + C   +  LG   +VC +    +  P  +C
Sbjct: 3   CNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNVIMVCRKGEWVALNPLRKC 62

Query: 154 KAR-CEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL 211
           + R C +PG+   G         ++ G     TCN+GY     +             W+ 
Sbjct: 63  QKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQ----LLGEINYRECDTDGWTN 118

Query: 212 DIPHCT 217
           DIP C 
Sbjct: 119 DIPICE 124

>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens} Length = 223

 Score =  110 bits (277), Expect = 2e-30
 Identities = 48/198 (24%), Positives = 65/198 (32%), Gaps = 19/198 (9%)

Query: 23  IICPKIV-VENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA 81
             CP+ V +     T +           + C  G     P   +C+ +G W       + 
Sbjct: 2   PSCPQNVNISGGTFT-LSHGWAPGSLLTYSCPQGLYP-SPASRLCKSSGQWQTPGATRSL 59

Query: 82  FFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT 141
                      PV CP P    NG     P  G Y VG  + F C D   L G     C 
Sbjct: 60  SKAVC-----KPVRCPAPVSFENGIYT--PRLGSYPVGGNVSFECEDGFILRGSPVRQCR 112

Query: 142 ETGRWSRAPPRCKA---RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPT 198
             G W      C      C  PG          +F +  GD ++  C+   V    +T +
Sbjct: 113 PNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGH--GDKVRYRCSSNLV----LTGS 166

Query: 199 SGPYCQSDGTWSLDIPHC 216
           S   CQ +G WS   P C
Sbjct: 167 SERECQGNGVWSGTEPIC 184

>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens} Length = 223

 Score =  110 bits (276), Expect = 4e-30
 Identities = 39/181 (21%), Positives = 60/181 (33%), Gaps = 19/181 (10%)

Query: 13  WSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS 71
            S     C+ + CP  +  EN   T    +    G+  F+C  G+ L+G P   C+ NG 
Sbjct: 57  RSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGM 116

Query: 72  WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
           W G    C+              HCP P + L        TG  +  G  +++ C+    
Sbjct: 117 WDGETAVCDN----------GAGHCPNPGISLGAVR----TGFRFGHGDKVRYRCSSNLV 162

Query: 132 LLGEETIVCTETGRWSRAPPRCKAR--CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY 189
           L G     C   G WS   P C+     ++P +               G           
Sbjct: 163 LTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHML--GATNPTQKTKES 220

Query: 190 V 190
           +
Sbjct: 221 L 221

>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens} Length = 223

 Score = 79.6 bits (196), Expect = 2e-18
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 16/130 (12%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWS-------R 148
           CP       G          +  G++L ++C    +     + +C  +G+W         
Sbjct: 4   CPQNVNISGGTFT---LSHGWAPGSLLTYSCPQGLYPSPA-SRLCKSSGQWQTPGATRSL 59

Query: 149 APPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG 207
           +   CK  RC  P   +NG   P    Y  G ++   C DG++    +  +    C+ +G
Sbjct: 60  SKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFI----LRGSPVRQCRPNG 115

Query: 208 TWSLDIPHCT 217
            W  +   C 
Sbjct: 116 MWDGETAVCD 125

>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens} Length = 223

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 12/65 (18%), Positives = 18/65 (27%), Gaps = 6/65 (9%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
            C        G        + PG  +  +C  G       +P S   C+S G W      
Sbjct: 3   SCPQNVNISGGTFTLSHG-WAPGSLLTYSCPQGLY----PSPASR-LCKSSGQWQTPGAT 56

Query: 216 CTNYT 220
            +   
Sbjct: 57  RSLSK 61

>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens} Length = 188

 Score =  109 bits (273), Expect = 4e-30
 Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 25/200 (12%)

Query: 25  CPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAF 82
           C     V+N Y+   + +    G  + +QC   Y++ G  +++C           +    
Sbjct: 5   CVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCKD--- 61

Query: 83  FFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE 142
                    +   C  P    NG  I       Y   + +++ C + + L G + I C  
Sbjct: 62  ---------STGKCGPPPPIDNGD-ITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRN 111

Query: 143 TGRWSRAPPRCKARCEYPGEPQNGKI-----IPLKFFYDPGDHIQVTCNDGYVKPLDITP 197
            G+WS  P             +N  I        K +   G+ ++  C  GY     ++ 
Sbjct: 112 -GQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYR----LSS 166

Query: 198 TSGPYCQSDGTWSLDIPHCT 217
            S     +     L+ P C 
Sbjct: 167 RSHTLRTTCWDGKLEYPTCA 186

>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens} Length = 188

 Score = 81.9 bits (202), Expect = 1e-19
 Identities = 29/152 (19%), Positives = 45/152 (29%), Gaps = 20/152 (13%)

Query: 11  GQWSG-EVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQ 67
           G W+           C     ++N  +T    +         +QC   YQL+G   I C+
Sbjct: 51  GNWTEPPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR 110

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHL---IEDPTGGPYRVGAILQF 124
            NG WS   P+C                     +  N ++            R G  ++F
Sbjct: 111 -NGQWSEP-PKCLH------------PCVISREIMENYNIALRWTAKQKLYSRTGESVEF 156

Query: 125 ACNDRHHLLGEETIVCTETGRWSRAPPRCKAR 156
            C   + L      + T         P C  R
Sbjct: 157 VCKRGYRLSSRSHTLRTTCWDGKLEYPTCAKR 188

>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens} Length = 188

 Score = 78.1 bits (192), Expect = 3e-18
 Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 9/126 (7%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152
              C  P    N + I       Y  G  +++ C   + + G+E ++C           +
Sbjct: 2   GTSCVNPPTVQNAY-IVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCK 60

Query: 153 CKAR-CEYPGEPQNGKIIPLKF-FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
                C  P    NG I       Y P   ++  C + Y   L+           +G WS
Sbjct: 61  DSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQ--LEGNKRI---TCRNGQWS 115

Query: 211 LDIPHC 216
            + P C
Sbjct: 116 -EPPKC 120

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  115 bits (288), Expect = 1e-29
 Identities = 43/211 (20%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 11  GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQK 68
           G WSG  P C          VEN  L    ++  +      F+C  G+ +KGP  + CQ 
Sbjct: 182 GIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQA 241

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
              W   +P C+               C  P   L+    +      +  G  + ++C  
Sbjct: 242 LNKWEPELPSCSR-------------VCQPPPDVLHAERTQ-RDKDNFSPGQEVFYSCEP 287

Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
            + L G  ++ CT  G WS A P C+   C+          +        G  +   C++
Sbjct: 288 GYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDE 347

Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
           G+                +  W+  +P C  
Sbjct: 348 GFQLKGSSASYCVL-AGMESLWNSSVPVCEQ 377

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  114 bits (286), Expect = 2e-29
 Identities = 43/210 (20%), Positives = 74/210 (35%), Gaps = 18/210 (8%)

Query: 11  GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQK 68
           G WSG  P C          VEN  L    ++  +      F+C  G+ +KGP  + CQ 
Sbjct: 632 GIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQA 691

Query: 69  NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
              W   +P C+               C  P   L+    +      +  G  + ++C  
Sbjct: 692 LNKWEPELPSCSR-------------VCQPPPDVLHAERTQ-RDKDNFSPGQEVFYSCEP 737

Query: 129 RHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
            + L G  ++ CT  G WS A P C+   C+          +        G  +   C++
Sbjct: 738 GYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDE 797

Query: 188 GYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           G+ +    + +       +  W+  +P C 
Sbjct: 798 GF-QLKGSSASYCVLAGMESLWNSSVPVCE 826

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  113 bits (284), Expect = 3e-29
 Identities = 60/223 (26%), Positives = 85/223 (38%), Gaps = 28/223 (12%)

Query: 9    SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQC------SWGYQLKG 60
             +  W+  VP C+QI CP    + N   T     +  Y     + C         + L G
Sbjct: 1717 MKALWNSSVPVCEQIFCPNPPAILNGRHTGTPFGDIPYGKEISYACDTHPDRGMTFNLIG 1776

Query: 61   PPDIVC----QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
               I C    Q NG WS   P C             P  CP P    NGH I       Y
Sbjct: 1777 ESSIRCTSDPQGNGVWSSPAPRCELS---------VPAACPHPPKIQNGHYIG-GHVSLY 1826

Query: 117  RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKI-IPLKFF 174
              G  + + C+  + L+G+  I CT+ G WS+    CK   C +P         + +K  
Sbjct: 1827 LPGMTISYICDPGYLLVGKGFIFCTDQGIWSQLDHYCKEVNCSFPLFMNGISKELEMKKV 1886

Query: 175  YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            Y  GD++ + C DGY     +  +    CQ+D  W   +  CT
Sbjct: 1887 YHYGDYVTLKCEDGYT----LEGSPWSQCQADDRWDPPLAKCT 1925

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  109 bits (272), Expect = 2e-27
 Identities = 49/224 (21%), Positives = 75/224 (33%), Gaps = 26/224 (11%)

Query: 9    SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
            +  +W  E+P+C ++  P   + +   T   Q+N   G  + + C  GY L+G   + C 
Sbjct: 1141 ALNKWEPELPSCSRVCQPPPEILHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCT 1200

Query: 68   KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
              G WS   P C                C      L    +        ++GA + F C+
Sbjct: 1201 PQGDWSPEAPRCA------------VKSCDDFLGQLPHGRV--LFPLNLQLGAKVSFVCD 1246

Query: 128  DRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIP-LKFFYDPGDHIQ 182
            +   L G     C   G    W+ + P C+   C  P    NG+           G  I 
Sbjct: 1247 EGFRLKGSSVSHCVLVGMRSLWNNSVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGKEIS 1306

Query: 183  VTCNDGYVKPLDITPT--SGPYCQSDG----TWSLDIPHCTNYT 220
             TC+    + +       S   C SD      WS   P C    
Sbjct: 1307 YTCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSV 1350

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  108 bits (271), Expect = 2e-27
 Identities = 48/222 (21%), Positives = 77/222 (34%), Gaps = 30/222 (13%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWG------YQLKG 60
               W  E P C +I C     + N       + N + G  + ++C+ G      ++L G
Sbjct: 109 DTVIWDNETPICDRIPCGLPPTITNGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVG 168

Query: 61  PPDIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
            P I C  N    G WSG  P+C               +   P    NG L+       +
Sbjct: 169 EPSIYCTSNDDQVGIWSGPAPQCII------------PNKCTPPNVENGILVS-DNRSLF 215

Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKII-PLKFFY 175
            +  +++F C     + G   + C    +W    P C   C+ P +  + +     K  +
Sbjct: 216 SLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNF 275

Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            PG  +  +C  GY      +      C   G WS   P C 
Sbjct: 276 SPGQEVFYSCEPGYDLRGAASMR----CTPQGDWSPAAPTCE 313

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  108 bits (271), Expect = 2e-27
 Identities = 44/211 (20%), Positives = 72/211 (34%), Gaps = 18/211 (8%)

Query: 9    SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVC 66
              G WSG  P C          VEN  L    ++       + F+C  G+ +KGP  + C
Sbjct: 1080 QVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKC 1139

Query: 67   QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
            Q    W   +P C+             V  P P +    H         +  G  + ++C
Sbjct: 1140 QALNKWEPELPSCS------------RVCQPPPEILHGEHTP--SHQDNFSPGQEVFYSC 1185

Query: 127  NDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
               + L G  ++ CT  G WS   PRC    C+          +        G  +   C
Sbjct: 1186 EPGYDLRGAASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQLGAKVSFVC 1245

Query: 186  NDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
            ++G+ +    + +          W+  +P C
Sbjct: 1246 DEGF-RLKGSSVSHCVLVGMRSLWNNSVPVC 1275

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  107 bits (268), Expect = 4e-27
 Identities = 48/221 (21%), Positives = 77/221 (34%), Gaps = 26/221 (11%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRG-HAIFQCSWGYQLKGPPDIVCQ 67
           +  +W  E+P+C ++  P   V +   T  +++N   G    + C  GY L+G   + C 
Sbjct: 241 ALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCT 300

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
             G WS A P C                C      L    +        ++GA + F C+
Sbjct: 301 PQGDWSPAAPTCE------------VKSCDDFMGQLLNGRV--LFPVNLQLGAKVDFVCD 346

Query: 128 DRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKII-PLKFFYDPGDHIQ 182
           +   L G     C   G    W+ + P C+   C  P    NG+        +  G  + 
Sbjct: 347 EGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVN 406

Query: 183 VTCN------DGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            TC+        +    + T       Q +G WS   P C 
Sbjct: 407 YTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCG 447

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  106 bits (266), Expect = 8e-27
 Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 30/220 (13%)

Query: 11   GQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWG------YQLKGPP 62
              WS + P CQ+I C  P  +    +++   +N  Y     ++C+ G      ++L G P
Sbjct: 1011 AHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEP 1070

Query: 63   DIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
             I C  N    G WSG  P+C               +   P    NG L+       + +
Sbjct: 1071 SIYCTSNDDQVGIWSGPAPQCI------------IPNKCTPPNVENGILVS-DNRSLFSL 1117

Query: 119  GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYDP 177
              +++F C     + G   + C    +W    P C   C+ P E  +G+  P  +  + P
Sbjct: 1118 NEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPEILHGEHTPSHQDNFSP 1177

Query: 178  GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            G  +  +C  GY    D+   +  +C   G WS + P C 
Sbjct: 1178 GQEVFYSCEPGY----DLRGAASLHCTPQGDWSPEAPRCA 1213

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  106 bits (265), Expect = 1e-26
 Identities = 49/220 (22%), Positives = 78/220 (35%), Gaps = 30/220 (13%)

Query: 11  GQWSGEVPTCQQIIC-PKIVVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKGPP 62
             WS + P CQ+I C     + N       + N  Y     ++C+ G      ++L G P
Sbjct: 561 AHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEP 620

Query: 63  DIVCQKN----GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
            I C  N    G WSG  P+C               +   P    NG L+       + +
Sbjct: 621 SIYCTSNDDQVGIWSGPAPQCII------------PNKCTPPNVENGILVS-DNRSLFSL 667

Query: 119 GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPL-KFFYDP 177
             +++F C     + G   + C    +W    P C   C+ P +  + +     K  + P
Sbjct: 668 NEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNFSP 727

Query: 178 GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           G  +  +C  GY     +   +   C   G WS   P C 
Sbjct: 728 GQEVFYSCEPGYD----LRGAASMRCTPQGDWSPAAPTCE 763

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  105 bits (263), Expect = 2e-26
 Identities = 47/226 (20%), Positives = 76/226 (33%), Gaps = 26/226 (11%)

Query: 9    SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
            + G+W  ++P C ++  P   + +   TL  Q+N   G  + + C   Y L+G   + C 
Sbjct: 1594 TNGRWGPKLPHCSRVCQPPPEILHGEHTLSHQDNFSPGQEVFYSCEPSYDLRGAASLHCT 1653

Query: 68   KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
              G WS   P C                C      L    +        ++GA + F C+
Sbjct: 1654 PQGDWSPEAPRC------------TVKSCDDFLGQLPHGRV--LLPLNLQLGAKVSFVCD 1699

Query: 128  DRHHLLGEETIVCTETG---RWSRAPPRCKAR-CEYPGEPQNGKIIPLKF-FYDPGDHIQ 182
            +   L G     C   G    W+ + P C+   C  P    NG+     F     G  I 
Sbjct: 1700 EGFRLKGRSASHCVLAGMKALWNSSVPVCEQIFCPNPPAILNGRHTGTPFGDIPYGKEIS 1759

Query: 183  VTCNDGYVKPL------DITPTSGPYCQSDGTWSLDIPHCTNYTDV 222
              C+    + +      + +       Q +G WS   P C      
Sbjct: 1760 YACDTHPDRGMTFNLIGESSIRCTSDPQGNGVWSSPAPRCELSVPA 1805

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  103 bits (258), Expect = 1e-25
 Identities = 45/223 (20%), Positives = 82/223 (36%), Gaps = 34/223 (15%)

Query: 11  GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
             W+G    C++  C       N  + +++    +     + C+ GY+L G     C  +
Sbjct: 49  SVWTGAKDRCRRKSCRNPPDPVNGMVHVIK-GIQFGSQIKYSCTKGYRLIGSSSATCIIS 107

Query: 70  GS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFAC 126
           G    W    P C            + + C +P    NG  I       +  G+++ + C
Sbjct: 108 GDTVIWDNETPIC------------DRIPCGLPPTITNGDFIS-TNRENFHYGSVVTYRC 154

Query: 127 ND------RHHLLGEETIVCTE----TGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFF 174
           N          L+GE +I CT      G WS   P+C       P   +NG ++   +  
Sbjct: 155 NPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSL 214

Query: 175 YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
           +   + ++  C  G+V    +       CQ+   W  ++P C+
Sbjct: 215 FSLNEVVEFRCQPGFV----MKGPRRVKCQALNKWEPELPSCS 253

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  103 bits (257), Expect = 1e-25
 Identities = 47/221 (21%), Positives = 76/221 (34%), Gaps = 26/221 (11%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
           +  +W  E+P+C ++  P   V +   T  +++N   G  + + C  GY L+G   + C 
Sbjct: 691 ALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCT 750

Query: 68  KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN 127
             G WS A P C                C      L    +        ++GA + F C+
Sbjct: 751 PQGDWSPAAPTC------------EVKSCDDFMGQLLNGRV--LFPVNLQLGAKVDFVCD 796

Query: 128 DRHHLLGEETIVCTETG---RWSRAPPRCKA-RCEYPGEPQNGKIIPLKFF-YDPGDHIQ 182
           +   L G     C   G    W+ + P C+   C  P    NG+        +  G  + 
Sbjct: 797 EGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVN 856

Query: 183 VTCNDGYVKPLDITP------TSGPYCQSDGTWSLDIPHCT 217
            TC+    +                  Q +G WS   P C 
Sbjct: 857 YTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCG 897

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  102 bits (256), Expect = 2e-25
 Identities = 41/210 (19%), Positives = 67/210 (31%), Gaps = 18/210 (8%)

Query: 11   GQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
            G WS   P C          V     +       +      F+C  G+ + G   + CQ 
Sbjct: 1535 GVWSSPPPRCISTNKCTAPEVENAIRVPGNRSFFSLTEIIRFRCQPGFVMVGSHTVQCQT 1594

Query: 69   NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND 128
            NG W   +P C+             V  P P +    H +       +  G  + ++C  
Sbjct: 1595 NGRWGPKLPHCS------------RVCQPPPEILHGEHTL--SHQDNFSPGQEVFYSCEP 1640

Query: 129  RHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCND 187
             + L G  ++ CT  G WS   PRC  + C+          + L      G  +   C++
Sbjct: 1641 SYDLRGAASLHCTPQGDWSPEAPRCTVKSCDDFLGQLPHGRVLLPLNLQLGAKVSFVCDE 1700

Query: 188  GYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            G+                   W+  +P C 
Sbjct: 1701 GFRLKGRSASHC-VLAGMKALWNSSVPVCE 1729

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score =  100 bits (249), Expect = 2e-24
 Identities = 45/220 (20%), Positives = 72/220 (32%), Gaps = 30/220 (13%)

Query: 11   GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-TYRGHAIFQCSWG------YQLKGPP 62
              W  + P C+ I C     + N       + +        +QC  G      ++L G  
Sbjct: 1464 VTWDKKAPICEIISCEPPPTISNGDFYSNNRTSFHNGTVVTYQCHTGPDGEQLFELVGER 1523

Query: 63   DIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
             I C     + G WS   P C               +        N   +       + +
Sbjct: 1524 SIYCTSKDDQVGVWSSPPPRCI------------STNKCTAPEVENAIRV-PGNRSFFSL 1570

Query: 119  GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKII-PLKFFYDP 177
              I++F C     ++G  T+ C   GRW    P C   C+ P E  +G+     +  + P
Sbjct: 1571 TEIIRFRCQPGFVMVGSHTVQCQTNGRWGPKLPHCSRVCQPPPEILHGEHTLSHQDNFSP 1630

Query: 178  GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            G  +  +C   Y      +      C   G WS + P CT
Sbjct: 1631 GQEVFYSCEPSYDLRGAASLH----CTPQGDWSPEAPRCT 1666

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 96.0 bits (238), Expect = 5e-23
 Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 26/221 (11%)

Query: 9    SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
                WS     C++  C         +  V  +        + C+ G++L G     C  
Sbjct: 947  DNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGHSSAECIL 1006

Query: 69   NGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN- 127
            +G+ +    +               + C +P    NG  I       +  G+++ + CN 
Sbjct: 1007 SGNTAHWSTKPPI---------CQRIPCGLPPTIANGDFIS-TNRENFHYGSVVTYRCNL 1056

Query: 128  -----DRHHLLGEETIVCT----ETGRWSRAPPRCKAR-CEYPGEPQNGKII-PLKFFYD 176
                     L+GE +I CT    + G WS   P+C       P   +NG ++   +  + 
Sbjct: 1057 GSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFS 1116

Query: 177  PGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
              + ++  C  G+V    +       CQ+   W  ++P C+
Sbjct: 1117 LNEVVEFRCQPGFV----MKGPRRVKCQALNKWEPELPSCS 1153

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 94.9 bits (235), Expect = 1e-22
 Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 32/224 (14%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK 68
               WS     C++  C         +  V  +        + C+ G++L G     C  
Sbjct: 497 DNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGHSSAECIL 556

Query: 69  NGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           +G+   WS   P C              + C +P    NG  I       +  G+++ + 
Sbjct: 557 SGNAAHWSTKPPIC------------QRIPCGLPPTIANGDFIS-TNRENFHYGSVVTYR 603

Query: 126 CNDRH------HLLGEETIVCT----ETGRWSRAPPRCKA-RCEYPGEPQNGKII-PLKF 173
           CN          L+GE +I CT    + G WS   P+C       P   +NG ++   + 
Sbjct: 604 CNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRS 663

Query: 174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            +   + ++  C  G+V    +       CQ+   W  ++P C+
Sbjct: 664 LFSLNEVVEFRCQPGFV----MKGPRRVKCQALNKWEPELPSCS 703

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 94.5 bits (234), Expect = 2e-22
 Identities = 50/226 (22%), Positives = 72/226 (31%), Gaps = 36/226 (15%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAI-FQCSWGYQLKGPPDIVCQ 67
            QG WS   PTC+   C   + +     ++   N   G  + F C  G+QLKG     C 
Sbjct: 301 PQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDEGFQLKGSSASYCV 360

Query: 68  KNGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
             G    W+ ++P C              + CP P +  NG          +  G  + +
Sbjct: 361 LAGMESLWNSSVPVC------------EQIFCPSPPVIPNGRHT-GKPLEVFPFGKAVNY 407

Query: 125 ACN------DRHHLLGEETIVCTET----GRWSRAPPRCKA----RCEYPGEPQNGKIIP 170
            C+          L+GE TI CT      G WS   PRC      +          K   
Sbjct: 408 TCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQT 467

Query: 171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
               +  G  ++  C   Y             C  +  WS     C
Sbjct: 468 NASDFPIGTSLKYECRPEYY-----GRPFSITCLDNLVWSSPKDVC 508

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 94.1 bits (233), Expect = 2e-22
 Identities = 53/230 (23%), Positives = 75/230 (32%), Gaps = 39/230 (16%)

Query: 9    SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQ 67
             QG WS E P C    C   + + P+  ++   N        F C  G++LKG     C 
Sbjct: 1201 PQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQLGAKVSFVCDEGFRLKGSSVSHCV 1260

Query: 68   KNGS---WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQF 124
              G    W+ ++P C              + CP P   LNG     P+ G    G  + +
Sbjct: 1261 LVGMRSLWNNSVPVC------------EHIFCPNPPAILNGRHTGTPS-GDIPYGKEISY 1307

Query: 125  ACNDRHH------LLGEETIVCTETGR----WSRAPPRCKARCEYP-------GEPQNGK 167
             C+          L+GE TI CT        WS   PRC+                 +  
Sbjct: 1308 TCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSVRAGHCKTPEQFPFASPT 1367

Query: 168  IIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT 217
            I    F +  G  +   C  GY             C  +  WS    +C 
Sbjct: 1368 IPINDFEFPVGTSLNYECRPGYF-----GKMFSISCLENLVWSSVEDNCR 1412

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 91.8 bits (227), Expect = 1e-21
 Identities = 55/225 (24%), Positives = 77/225 (34%), Gaps = 33/225 (14%)

Query: 9    SQGQWSGEVPTCQQIICPK-IVVENPYLTLVEQNNTYRGHAI-FQCSW------GYQLKG 60
             +  W+  VP C+QI CP   V+ N   T         G A+ + C         + L G
Sbjct: 814  MESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLIG 873

Query: 61   PPDIVC----QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
               I C    Q NG WS   P C               HC  P   L   L        +
Sbjct: 874  ESTIRCTSDPQGNGVWSSPAPRCGI-----------LGHCQAPDHFLFAKLKTQTNASDF 922

Query: 117  RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFY 175
             +G  L++ C    +     +I C +   WS     CK + C+ P +P NG +  +    
Sbjct: 923  PIGTSLKYECRP-EYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVIT-DI 980

Query: 176  DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCT 217
              G  I  +C  G+     +   S   C   G    WS   P C 
Sbjct: 981  QVGSRINYSCTTGH----RLIGHSSAECILSGNTAHWSTKPPICQ 1021

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 91.4 bits (226), Expect = 2e-21
 Identities = 33/152 (21%), Positives = 43/152 (28%), Gaps = 18/152 (11%)

Query: 11   GQWSGEVPTCQQIIC-----PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIV 65
            G WS   P C+  +      P  +    Y+              + C  GY L G   I 
Sbjct: 1790 GVWSSPAPRCELSVPAACPHPPKIQNGHYIGGHVSLYLPGMTISYICDPGYLLVGKGFIF 1849

Query: 66   CQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
            C   G WS     C              V+C  P         E      Y  G  +   
Sbjct: 1850 CTDQGIWSQLDHYCK------------EVNCSFPLFMNGIS-KELEMKKVYHYGDYVTLK 1896

Query: 126  CNDRHHLLGEETIVCTETGRWSRAPPRCKARC 157
            C D + L G     C    RW     +C +R 
Sbjct: 1897 CEDGYTLEGSPWSQCQADDRWDPPLAKCTSRA 1928

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 90.2 bits (223), Expect = 4e-21
 Identities = 46/219 (21%), Positives = 69/219 (31%), Gaps = 24/219 (10%)

Query: 11   GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN-------TYRGHAIFQCSWGYQLKGPP 62
              W+  VP C+ I CP    + N   T     +       +Y           + L G  
Sbjct: 1266 SLWNNSVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGKEISYTCDPHPDRGMTFNLIGES 1325

Query: 63   DIVCQKNGS----WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRV 118
             I C  +      WS   P C               HC  P                + V
Sbjct: 1326 TIRCTSDPHGNGVWSSPAPRCELSVR--------AGHCKTPEQFPFASPTIPINDFEFPV 1377

Query: 119  GAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR-CEYPGEPQNGKIIPLKFFYDP 177
            G  L + C    +     +I C E   WS     C+ + C  P EP NG +         
Sbjct: 1378 GTSLNYECRP-GYFGKMFSISCLENLVWSSVEDNCRRKSCGPPPEPFNGMVHINTDTQ-F 1435

Query: 178  GDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
            G  +  +CN+G+ + +    T+     ++ TW    P C
Sbjct: 1436 GSTVNYSCNEGF-RLIGSPSTTCLVSGNNVTWDKKAPIC 1473

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 88.3 bits (218), Expect = 2e-20
 Identities = 46/215 (21%), Positives = 71/215 (33%), Gaps = 30/215 (13%)

Query: 9   SQGQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSW------GYQLKG 60
            +  W+  VP C+QI C  P ++    +     +   +     + C         + L G
Sbjct: 364 MESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLIG 423

Query: 61  PPDIVC----QKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPY 116
              I C    Q NG WS   P C               HC  P   L   L        +
Sbjct: 424 ESTIRCTSDPQGNGVWSSPAPRCGI-----------LGHCQAPDHFLFAKLKTQTNASDF 472

Query: 117 RVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA-RCEYPGEPQNGKIIPLKFFY 175
            +G  L++ C    +     +I C +   WS     CK   C+ P +P NG +  +    
Sbjct: 473 PIGTSLKYECRP-EYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQ 531

Query: 176 DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
             G  I  +C  G+     +   S   C   G  +
Sbjct: 532 -VGSRINYSCTTGHR----LIGHSSAECILSGNAA 561

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 87.9 bits (217), Expect = 3e-20
 Identities = 46/225 (20%), Positives = 74/225 (32%), Gaps = 34/225 (15%)

Query: 11   GQWSGEVPTCQQIIC-------PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD 63
            G WS   P C+  +         +    +P + + +          ++C  GY       
Sbjct: 1337 GVWSSPAPRCELSVRAGHCKTPEQFPFASPTIPINDFEFPVGTSLNYECRPGY-FGKMFS 1395

Query: 64   IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQ 123
            I C +N  WS     C                C  P  P NG +         + G+ + 
Sbjct: 1396 ISCLENLVWSSVEDNCR------------RKSCGPPPEPFNGMVH---INTDTQFGSTVN 1440

Query: 124  FACNDRHHLLGEETIVCTETGR---WSRAPPRCKA-RCEYPGEPQNGKIIPL-KFFYDPG 178
            ++CN+   L+G  +  C  +G    W +  P C+   CE P    NG      +  +  G
Sbjct: 1441 YSCNEGFRLIGSPSTTCLVSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNNRTSFHNG 1500

Query: 179  DHIQVTCNDGYVKP--LDITPTSGPYCQSD----GTWSLDIPHCT 217
              +   C+ G       ++      YC S     G WS   P C 
Sbjct: 1501 TVVTYQCHTGPDGEQLFELVGERSIYCTSKDDQVGVWSSPPPRCI 1545

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 83.7 bits (206), Expect = 7e-19
 Identities = 45/203 (22%), Positives = 67/203 (33%), Gaps = 27/203 (13%)

Query: 26  PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFF 85
             +    P     E       +  ++C  GY  +    I+C KN  W+GA   C      
Sbjct: 6   EWLPFARPTNLTDEFEFPIGTYLNYECRPGYSGRPF-SIICLKNSVWTGAKDRC------ 58

Query: 86  FFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG- 144
                     C  P  P+NG +         + G+ ++++C   + L+G  +  C  +G 
Sbjct: 59  ------RRKSCRNPPDPVNGMVH---VIKGIQFGSQIKYSCTKGYRLIGSSSATCIISGD 109

Query: 145 --RWSRAPPRCKAR-CEYPGEPQNGKIIPLKF-FYDPGDHIQVTCNDGYVKPLDITPTSG 200
              W    P C    C  P    NG  I      +  G  +   CN G            
Sbjct: 110 TVIWDNETPICDRIPCGLPPTITNGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGE 169

Query: 201 P--YCQSD----GTWSLDIPHCT 217
           P  YC S+    G WS   P C 
Sbjct: 170 PSIYCTSNDDQVGIWSGPAPQCI 192

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931

 Score = 72.5 bits (177), Expect = 6e-15
 Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 95  HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
            C  P                + +G  L + C   +      +I+C +   W+ A  RC+
Sbjct: 1   QCNAPEWLPFARPTNLTDEFEFPIGTYLNYECRPGYSGRP-FSIICLKNSVWTGAKDRCR 59

Query: 155 AR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWS 210
            + C  P +P NG +  +K     G  I+ +C  GY   L  + ++   C   G    W 
Sbjct: 60  RKSCRNPPDPVNGMVHVIKGIQ-FGSQIKYSCTKGYR--LIGSSSA--TCIISGDTVIWD 114

Query: 211 LDIPHCT 217
            + P C 
Sbjct: 115 NETPICD 121

>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A Length = 187

 Score = 97.3 bits (242), Expect = 2e-25
 Identities = 39/179 (21%), Positives = 62/179 (34%), Gaps = 26/179 (14%)

Query: 43  TYRGHAIFQCSWGYQLKGPPD---IVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVP 99
               +  + C   ++         I C ++G WS A+P                  C  P
Sbjct: 29  AVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVPCL--------------RKCYFP 73

Query: 100 ALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR--C 157
            L  NG+      G  +  G  +  AC+  + L   +T V      WS  P   + +   
Sbjct: 74  YLE-NGYNQ--NHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVKTCS 130

Query: 158 EYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           +   + +NG I   ++ Y   +  +  C  GYV   D   +    C  DG WS   P C
Sbjct: 131 KSSIDIENGFISESQYTYALKEKAKYQCKLGYV-TADGETSGSITCGKDG-WS-AQPTC 186

>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A Length = 187

 Score = 78.8 bits (194), Expect = 2e-18
 Identities = 29/144 (20%), Positives = 42/144 (29%), Gaps = 20/144 (13%)

Query: 13  WSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSW 72
           WS  VP  ++  C    +EN Y     +           C  GY L      V      W
Sbjct: 60  WSPAVPCLRK--CYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGW 117

Query: 73  SGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHL 132
           S                      C   ++ +    I   +   Y +    ++ C   +  
Sbjct: 118 SPTPRCI------------RVKTCSKSSIDIENGFIS-ESQYTYALKEKAKYQCKLGYVT 164

Query: 133 LGEET---IVCTETGRWSRAPPRC 153
              ET   I C + G WS A P C
Sbjct: 165 ADGETSGSITCGKDG-WS-AQPTC 186

>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A Length = 187

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 9   SQGQWSGEVPTCQQIIC--PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGP---PD 63
            +  WS      +   C    I +EN +++  +     +  A +QC  GY          
Sbjct: 113 MENGWSPTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGS 172

Query: 64  IVCQKNGSWSGAIPEC 79
           I C K+G WS   P C
Sbjct: 173 ITCGKDG-WSA-QPTC 186

>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A Length = 155

 Score = 95.0 bits (236), Expect = 5e-25
 Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 27/163 (16%)

Query: 19  TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGS 71
           +     CP++    +  +   +    ++   +  C  GY++           I C K+G+
Sbjct: 2   SMTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGT 61

Query: 72  WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
           WS  IP C              V C  P    +G +            + ++++C + ++
Sbjct: 62  WSNKIPTCK------------IVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYY 109

Query: 132 LL---GEETIVCTETGRWS-----RAPPRCKARCEYPGEPQNG 166
            +         C+  G W      R+ P C   C  P   +  
Sbjct: 110 KMLNNNTGIYTCSAQGVWMNKVLGRSLPTCLPVCGLPKFSRKL 152

>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A Length = 155

 Score = 85.4 bits (211), Expect = 2e-21
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 12/134 (8%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRW 146
              CP    P++G +  +P+   Y     +  +C+  + +L +        I C + G W
Sbjct: 5   GNECPELQPPVHGKI--EPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTW 62

Query: 147 SRAPPRCKA-RCEYPGEPQNGKII--PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYC 203
           S   P CK   C  PGE ++G I              I+ +C + Y K +    T    C
Sbjct: 63  SNKIPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYK-MLNNNTGIYTC 121

Query: 204 QSDGTWSLDIPHCT 217
            + G W   +   +
Sbjct: 122 SAQGVWMNKVLGRS 135

>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A Length = 155

 Score = 57.7 bits (139), Expect = 6e-11
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNN--TYRGHAIFQCSWGYQL---KGPP 62
             G WS ++PTC+ + C     +E+  +T   +NN  TY+    + C   Y         
Sbjct: 58  KDGTWSNKIPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNTG 117

Query: 63  DIVCQKNGSWSGAIPEC 79
              C   G W   +   
Sbjct: 118 IYTCSAQGVWMNKVLGR 134

>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A Length = 155

 Score = 57.3 bits (138), Expect = 8e-11
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 153 CKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQSDGTW 209
                C     P +GKI P +  Y   D + V+C+ GY  +K      T    C  DGTW
Sbjct: 3   MTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTW 62

Query: 210 SLDIPHCT 217
           S  IP C 
Sbjct: 63  SNKIPTCK 70

>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A Length = 125

 Score = 89.9 bits (223), Expect = 3e-23
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 20/121 (16%)

Query: 41  NNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAFFFFFFFFFFNPVHCP 97
              +     F C+ GY+L G     C  +GS   WS  +PEC              ++CP
Sbjct: 19  GILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC------------REIYCP 66

Query: 98  VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAPPRCK 154
            P    NG +        Y     + +ACN    ++GE +I CT   + G WS  PP C+
Sbjct: 67  APPQIDNGII--QGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECR 124

Query: 155 A 155
            
Sbjct: 125 G 125

>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A Length = 125

 Score = 87.2 bits (216), Expect = 3e-22
 Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 14/128 (10%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPR 152
           CP P    NG +      G    GA + F+CN  + L G  +  C  +G   +WS   P 
Sbjct: 3   CPNPGEIRNGQID---VPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPE 59

Query: 153 CKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ---SDGT 208
           C+   C  P +  NG I   +  Y     +   CN G+   +    +   YC     +G 
Sbjct: 60  CREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFT--MIGEHSI--YCTVNNDEGE 115

Query: 209 WSLDIPHC 216
           WS   P C
Sbjct: 116 WSGPPPEC 123

>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A Length = 125

 Score = 63.7 bits (155), Expect = 2e-13
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ 67
           S  QWS  +P C++I CP    ++N  +     +  YR    + C+ G+ + G   I C 
Sbjct: 49  SSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCT 108

Query: 68  KN---GSWSGAIPECNA 81
            N   G WSG  PEC  
Sbjct: 109 VNNDEGEWSGPPPECRG 125

>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A Length = 125

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLD 212
            C  PGE +NG+I         G  I  +CN GY     +  ++  +C   G+   WS  
Sbjct: 2   SCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGYK----LFGSTSSFCLISGSSVQWSDP 56

Query: 213 IPHCT 217
           +P C 
Sbjct: 57  LPECR 61

>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 Length = 128

 Score = 88.7 bits (220), Expect = 6e-23
 Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 10/128 (7%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
            HC  P   L   L    T   + +G  L++ C   ++     +I C +   WS     C
Sbjct: 4   AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRP-FSITCLDNLVWSSPKDVC 62

Query: 154 KAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---W 209
           K + C+ P +P NG +  +      G  I  +C  G+   L    ++   C   G    W
Sbjct: 63  KRKSCKTPPDPVNGMVHVITDIQ-VGSRITYSCTTGHR--LIGHSSA--ECILSGNTAHW 117

Query: 210 SLDIPHCT 217
           S   P C 
Sbjct: 118 STKPPICQ 125

>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 Length = 128

 Score = 79.9 bits (197), Expect = 2e-19
 Identities = 26/133 (19%), Positives = 42/133 (31%), Gaps = 19/133 (14%)

Query: 26  PKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFF 85
              +           +        ++C   Y  +    I C  N  WS     C      
Sbjct: 10  DHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFS-ITCLDNLVWSSPKDVC------ 62

Query: 86  FFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG- 144
                     C  P  P+NG +         +VG+ + ++C   H L+G  +  C  +G 
Sbjct: 63  ------KRKSCKTPPDPVNGMVH---VITDIQVGSRITYSCTTGHRLIGHSSAECILSGN 113

Query: 145 --RWSRAPPRCKA 155
              WS  PP C+ 
Sbjct: 114 TAHWSTKPPICQR 126

>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 Length = 128

 Score = 57.1 bits (138), Expect = 6e-11
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 5/73 (6%)

Query: 11  GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
             WS     C++  C       N  +  V  +        + C+ G++L G     C  +
Sbjct: 53  LVWSSPKDVCKRKSCKTPPDPVNGMVH-VITDIQVGSRITYSCTTGHRLIGHSSAECILS 111

Query: 70  GS---WSGAIPEC 79
           G+   WS   P C
Sbjct: 112 GNTAHWSTKPPIC 124

>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 Length = 128

 Score = 49.0 bits (117), Expect = 6e-08
 Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 9/68 (13%)

Query: 153 CKARCEYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGYV-KPLDITPTSGPYCQSDGTW 209
            +A C+ P      K+        +  G  ++  C   Y  +P  IT      C  +  W
Sbjct: 2   AEAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFSIT------CLDNLVW 55

Query: 210 SLDIPHCT 217
           S     C 
Sbjct: 56  SSPKDVCK 63

>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C Length = 130

 Score = 87.6 bits (217), Expect = 2e-22
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 17/140 (12%)

Query: 22  QIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAI 76
           +  C     + N  ++             + CS  ++L G   ++C    + +G+W    
Sbjct: 1   EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60

Query: 77  PECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE 136
           P+C  F             CP P +P    +       PYR G  + FAC     + G +
Sbjct: 61  PKCEYFN--------KYSSCPEPIVPGGYKI---RGSTPYRHGDSVTFACKTNFSMNGNK 109

Query: 137 TIVCTETGRWSRAP-PRCKA 155
           ++ C     W     P C +
Sbjct: 110 SVWCQANNMWGPTRLPTCVS 129

>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C Length = 130

 Score = 83.4 bits (206), Expect = 9e-21
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 17/134 (12%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRA 149
             C  P   LNG +       P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 2   ASCGSPPPILNGRI--SYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 59

Query: 150 PPRCKA-----RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ 204
            P+C+       C  P  P  G  I     Y  GD +   C   +     +      +CQ
Sbjct: 60  APKCEYFNKYSSCPEPIVP-GGYKIRGSTPYRHGDSVTFACKTNFS----MNGNKSVWCQ 114

Query: 205 SDGTWSL-DIPHCT 217
           ++  W    +P C 
Sbjct: 115 ANNMWGPTRLPTCV 128

>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C Length = 130

 Score = 61.8 bits (150), Expect = 1e-12
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 11  GQWSGEVPTCQQI----ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC 66
           G W    P C+       CP+ +V   Y         +     F C   + + G   + C
Sbjct: 54  GTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWC 113

Query: 67  QKNGSWSGA-IPEC 79
           Q N  W    +P C
Sbjct: 114 QANNMWGPTRLPTC 127

>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C Length = 130

 Score = 47.6 bits (113), Expect = 2e-07
 Identities = 15/64 (23%), Positives = 24/64 (37%)

Query: 154 KARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDI 213
           +A C  P    NG+I         G  I+ +C+  +    + +       + DGTW    
Sbjct: 1   EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60

Query: 214 PHCT 217
           P C 
Sbjct: 61  PKCE 64

>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C Length = 129

 Score = 82.7 bits (204), Expect = 2e-20
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 11/130 (8%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152
              C  P    NG  I       Y   + +++ C + + L G + I C   G+WS  P  
Sbjct: 4   FGKCGPPPPIDNGD-ITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRN-GQWSEPPKC 61

Query: 153 CKARCEYPGEPQNGKII-----PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG 207
                      +N  I        K +   G+ ++  C  GY     ++  S     +  
Sbjct: 62  LHPCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYR----LSSRSHTLRTTCW 117

Query: 208 TWSLDIPHCT 217
              L+ P C 
Sbjct: 118 DGKLEYPTCA 127

>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C Length = 129

 Score = 67.3 bits (164), Expect = 1e-14
 Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 17/141 (12%)

Query: 20  CQQIICPK-IVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIP 77
            +   C     ++N  +T    +         +QC   YQL+G   I C+ NG WS   P
Sbjct: 2   AEFGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSEP-P 59

Query: 78  ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIE--DPTGGPYRVGAILQFACNDRHHLLGE 135
           +C             P       +      +          R G  ++F C   + L   
Sbjct: 60  KCLH-----------PCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSR 108

Query: 136 ETIVCTETGRWSRAPPRCKAR 156
              + T         P C  R
Sbjct: 109 SHTLRTTCWDGKLEYPTCAKR 129

>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C Length = 129

 Score = 49.6 bits (118), Expect = 4e-08
 Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 5/74 (6%)

Query: 11  GQWSGEVPTCQQIICPKIVVENPYLTL-----VEQNNTYRGHAIFQCSWGYQLKGPPDIV 65
           GQWS         +  + ++EN  + L      +  +       F C  GY+L      +
Sbjct: 53  GQWSEPPKCLHPCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTL 112

Query: 66  CQKNGSWSGAIPEC 79
                      P C
Sbjct: 113 RTTCWDGKLEYPTC 126

>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A Length = 136

 Score = 81.1 bits (200), Expect = 7e-20
 Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 28/148 (18%)

Query: 20  CQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGA 75
            +   C       N  +  V  +        + C+ G++L G     C  +G+   WS  
Sbjct: 2   AEAKSCKTPPDPVNGMVH-VITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60

Query: 76  IPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACN------DR 129
            P C              + C +P    NG  I       +  G+++ + CN        
Sbjct: 61  PPIC------------QRIPCGLPPTIANGDFI-STNRENFHYGSVVTYRCNLGSRGRKV 107

Query: 130 HHLLGEETIVCTE----TGRWSRAPPRC 153
             L+GE +I CT      G WS   P+C
Sbjct: 108 FELVGEPSIYCTSNDDQVGIWSGPAPQC 135

>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A Length = 136

 Score = 80.0 bits (197), Expect = 2e-19
 Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 14/135 (10%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRA 149
              C  P  P+NG +         +VG+ + ++C   H L+G  +  C  +G    WS  
Sbjct: 4   AKSCKTPPDPVNGMVH---VITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60

Query: 150 PPRCKA-RCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPT--SGPYCQS 205
           PP C+   C  P    NG  I   +  +  G  +   CN G               YC S
Sbjct: 61  PPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTS 120

Query: 206 D----GTWSLDIPHC 216
           +    G WS   P C
Sbjct: 121 NDDQVGIWSGPAPQC 135

>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A Length = 136

 Score = 53.8 bits (129), Expect = 1e-09
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 12/83 (14%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAI-FQCSWG------YQLKG 60
           +   WS + P CQ+I C     + N       + N + G  + ++C+ G      ++L G
Sbjct: 53  NTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVG 112

Query: 61  PPDIVCQKN----GSWSGAIPEC 79
            P I C  N    G WSG  P+C
Sbjct: 113 EPSIYCTSNDDQVGIWSGPAPQC 135

>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A Length = 136

 Score = 41.4 bits (97), Expect = 3e-05
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 9/69 (13%)

Query: 153 CKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT--- 208
            +A+ C+ P +P NG +  +      G  I  +C  G+     +   S   C   G    
Sbjct: 2   AEAKSCKTPPDPVNGMVHVITDIQ-VGSRITYSCTTGH----RLIGHSSAECILSGNTAH 56

Query: 209 WSLDIPHCT 217
           WS   P C 
Sbjct: 57  WSTKPPICQ 65

>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens} Length = 133

 Score = 80.3 bits (198), Expect = 1e-19
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 10/129 (7%)

Query: 94  VHCPVPALPLNGHLIE-DPTGGPYRVGAILQFACNDRHHLL-GEETIVCTETGRWSRAPP 151
           ++C  P        ++   T   ++ G  L++ C   +      +T+ C   G W     
Sbjct: 1   MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYNTF 60

Query: 152 RCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT--- 208
               RC +PGE +NG++         G  I+ +C++G+   L  + TS   C+       
Sbjct: 61  CIYKRCRHPGELRNGQVEIKTDLS-FGSQIEFSCSEGFF--LIGSTTS--RCEVQDRGVG 115

Query: 209 WSLDIPHCT 217
           WS  +P C 
Sbjct: 116 WSHPLPQCE 124

>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens} Length = 133

 Score = 73.8 bits (181), Expect = 3e-17
 Identities = 26/131 (19%), Positives = 40/131 (30%), Gaps = 21/131 (16%)

Query: 36  TLVEQNNTYRGHAIFQCSWGYQLKGPPD-IVCQKNGSWSGAIPECNAFFFFFFFFFFNPV 94
           TL E          + C  GY        + C  +G W      C               
Sbjct: 18  TLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYN-TFC------------IYK 64

Query: 95  HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPP 151
            C  P    NG +           G+ ++F+C++   L+G  T  C    R   WS   P
Sbjct: 65  RCRHPGELRNGQVE---IKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLP 121

Query: 152 RCKA-RCEYPG 161
           +C+     +  
Sbjct: 122 QCEILEHHHHH 132

>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens} Length = 133

 Score = 49.9 bits (119), Expect = 3e-08
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 11  GQWSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN 69
           G+W      C    C     + N  +  ++ + ++     F CS G+ L G     C+  
Sbjct: 53  GEWVYN-TFCIYKRCRHPGELRNGQVE-IKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQ 110

Query: 70  GS---WSGAIPEC 79
                WS  +P+C
Sbjct: 111 DRGVGWSHPLPQC 123

>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} Length = 159

 Score = 81.0 bits (199), Expect = 1e-19
 Identities = 37/163 (22%), Positives = 55/163 (33%), Gaps = 32/163 (19%)

Query: 25  CPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGSWSGAIPE 78
            PK + E   +  ++    +R + I  C  GYQL            VCQ +G+W  A+P 
Sbjct: 7   QPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPR 66

Query: 79  CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL----- 133
           C                C  P    NG      T G     A +Q+ C++ ++ +     
Sbjct: 67  CK------------IKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAG 114

Query: 134 ----GEETIVCTETGRWSRAP-----PRCKARCEYPGEPQNGK 167
                +    CT  G W         PRC   C  P  P   +
Sbjct: 115 SRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKPVNPVEQR 157

>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} Length = 159

 Score = 74.8 bits (183), Expect = 3e-17
 Identities = 29/139 (20%), Positives = 43/139 (30%), Gaps = 15/139 (10%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRW 146
              CP P       +I+      Y+        C   + L+         T VC + G W
Sbjct: 2   TQACPQPKTLDEFTIIQ-NLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTW 60

Query: 147 SRAPPRCKARCE-YPGEPQNGKI--IPLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGP 201
            RA PRCK +    P    NG                IQ  C++ Y  ++    +  S  
Sbjct: 61  HRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQ 120

Query: 202 ---YCQSDGTWSLDIPHCT 217
               C + G W  +     
Sbjct: 121 GVYTCTAQGIWKNEQKGEK 139

>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} Length = 159

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 20/115 (17%), Positives = 28/115 (24%), Gaps = 30/115 (26%)

Query: 9   SQGQWSGEVPTCQQIICPKI-VVENPYLTLV--EQNNTYRGHAIFQCSWGY--------- 56
             G W   +P C+   C +   + N           NTY+    + C   Y         
Sbjct: 56  DDGTWHRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGS 115

Query: 57  QLKGPPDIVCQKNGSWSG-----AIPECNAFFFFFFFFFFNPVHCPVPALPLNGH 106
           +        C   G W        IP C                C  P  P+   
Sbjct: 116 RESEQGVYTCTAQGIWKNEQKGEKIPRCLP-------------VCGKPVNPVEQR 157

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Length = 913

 Score = 79.2 bits (194), Expect = 3e-17
 Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 10/164 (6%)

Query: 56  YQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGP 115
            Q +     + + NG     I +                 CP P  P NG +        
Sbjct: 585 RQEEDCTFSIMENNGQPC--INDDEEMKEVDLPEIEADSGCPQPVPPENGFI--RNEKQL 640

Query: 116 YRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC-KARCEYPGEPQNGKIIPLKFF 174
           Y VG  ++ +C      +G +   C   G W +    C +  C  P   +   I P +  
Sbjct: 641 YLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRL 700

Query: 175 YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN 218
           Y  G+ I++TC  G+V    +   S   CQ   +W+  I +   
Sbjct: 701 YRIGESIELTCPKGFV----VAGPSRYTCQ-GNSWTPPISNSLT 739

>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus} Length = 124

 Score = 73.8 bits (181), Expect = 3e-17
 Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 95  HCPVPALPLNGHLIEDPT---GGPYRVGAILQFACND---RHHLLGEETIVCTETGRWSR 148
            C  P     G L  + +     P  +G    + C++          + + CT  G W  
Sbjct: 4   PCEFPQFK-YGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEP 61

Query: 149 APPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT 208
             P C  +C +    +NG     +  Y  G  ++V C +GY   L     +   C  +G 
Sbjct: 62  EVP-CVRKCVFH-YVENGDSAYWEKVYVQGQSLKVQCYNGYS--LQNGQDT-MTCTENG- 115

Query: 209 WSLDIPHCT 217
           WS   P C 
Sbjct: 116 WS-PPPKCI 123

>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus} Length = 124

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 9   SQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLK-GPPDIVCQ 67
           +   W  E   C +  C    VEN      E+          QC  GY L+ G   + C 
Sbjct: 55  TAQGWEPE-VPCVRK-CVFHYVENGDSAYWEKVYVQGQSLKVQCYNGYSLQNGQDTMTCT 112

Query: 68  KNGSWSGAIPEC 79
           +NG WS   P+C
Sbjct: 113 ENG-WSPP-PKC 122

>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 69.4 bits (170), Expect = 4e-16
 Identities = 22/86 (25%), Positives = 28/86 (32%), Gaps = 16/86 (18%)

Query: 72  WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH 131
            SG+  E                 C  P +P  G      TG  +  G  L F C     
Sbjct: 2   SSGSSGEIE------------KGGCGDPGIPAYGKR----TGSSFLHGDTLTFECPAAFE 45

Query: 132 LLGEETIVCTETGRWSRAPPRCKARC 157
           L+GE  I C +  +WS   P C    
Sbjct: 46  LVGERVITCQQNNQWSGNKPSCSGPS 71

>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 61.3 bits (149), Expect = 5e-13
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 13 WSGEVPTCQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS 71
           SG     ++  C    +      T    +  +     F+C   ++L G   I CQ+N  
Sbjct: 2  SSGSSGEIEKGGCGDPGIPAYGKRT--GSSFLHGDTLTFECPAAFELVGERVITCQQNNQ 59

Query: 72 WSGAIPEC 79
          WSG  P C
Sbjct: 60 WSGNKPSC 67

>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 55.6 bits (134), Expect = 6e-11
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 7/73 (9%)

Query: 146 WSRAPPRCKA-RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ 204
            S +    +   C  PG P  GK     F +  GD +   C   +     +       CQ
Sbjct: 2   SSGSSGEIEKGGCGDPGIPAYGKRTGSSFLH--GDTLTFECPAAFE----LVGERVITCQ 55

Query: 205 SDGTWSLDIPHCT 217
            +  WS + P C+
Sbjct: 56  QNNQWSGNKPSCS 68

>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens} Length = 376

 Score = 71.5 bits (174), Expect = 8e-15
 Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 17/188 (9%)

Query: 23  IICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAIP 77
           I C     + N  ++             + CS  ++L G   ++C    + +G+W    P
Sbjct: 2   ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 61

Query: 78  ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEET 137
           +C          F     CP P +P    +       PYR G  + FAC     + G ++
Sbjct: 62  KCEY--------FNKYSSCPEPIVPGGYKI---RGSTPYRHGDSVTFACKTNFSMNGNKS 110

Query: 138 IVCTETGRWSR-APPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDIT 196
           + C     W     P C +     G  +      L     P D     C     +   + 
Sbjct: 111 VWCQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVF 170

Query: 197 PTSGPYCQ 204
                   
Sbjct: 171 IFPPKPKD 178

>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens} Length = 376

 Score = 50.3 bits (119), Expect = 1e-07
 Identities = 33/216 (15%), Positives = 51/216 (23%), Gaps = 33/216 (15%)

Query: 11  GQWSGEVPTCQQI----ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC 66
           G W    P C+       CP+ +V   Y         +     F C   + + G   + C
Sbjct: 54  GTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWC 113

Query: 67  QKNGSWSG-AIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFA 125
           Q N  W    +P C              V     ++   G         P   G      
Sbjct: 114 QANNMWGPTRLPTC------------VSVFPLEGSIEGRGGSELADPEVPRDCGCKPCIC 161

Query: 126 CNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTC 185
                                   PP+ K        P+   ++      DP        
Sbjct: 162 TVPEVS-------------SVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFV 208

Query: 186 NDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYTD 221
           +D  V       T     Q + T+         + D
Sbjct: 209 DDVEVHT---AQTQPREEQFNSTFRSVSELPIMHQD 241

>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens} Length = 376

 Score = 41.9 bits (97), Expect = 8e-05
 Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 8/64 (12%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYC----QSDGTWSLD 212
           C  P    NG+I         G  I+ +C+  +     +       C    + DGTW   
Sbjct: 4   CGSPPPILNGRISYYSTPIAVGTVIRYSCSGTF----RLIGEKSLLCITKDKVDGTWDKP 59

Query: 213 IPHC 216
            P C
Sbjct: 60  APKC 63

>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74

 Score = 59.4 bits (144), Expect = 2e-12
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152
              C       NG      +      GA + + C+  + ++G +T+ C     WS  PP 
Sbjct: 5   SSGCSDLPEIQNGWKT--TSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPF 62

Query: 153 CKA-RCEYP 160
           C+      P
Sbjct: 63  CEKTEESGP 71

>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74

 Score = 53.6 bits (129), Expect = 3e-10
 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 153 CKARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD 212
             + C    E QNG           G  I   C+ GY   +  + T    CQ D +WS D
Sbjct: 4   GSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYD--IVGSDTL--TCQWDLSWSSD 59

Query: 213 IPHC 216
            P C
Sbjct: 60  PPFC 63

>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74

 Score = 50.9 bits (122), Expect = 4e-09
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 14 SGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWS 73
          S     C  +       +N + T             +QC  GY + G   + CQ + SWS
Sbjct: 2  SSGSSGCSDLPEI----QNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWS 57

Query: 74 GAIPEC 79
             P C
Sbjct: 58 SDPPFC 63

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 61.3 bits (149), Expect = 2e-11
 Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 26/159 (16%)

Query: 25  CPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGSWSGAIP 77
           CP  +   N +++ V+     +      C  GY+L            VCQK+GSW   +P
Sbjct: 17  CPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMP 76

Query: 78  ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GE 135
            C            + V C  P    +G +      G     A++Q++C +  + +   +
Sbjct: 77  AC------------SIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVND 124

Query: 136 ETIVCTETGRW-----SRAPPRCKARCEYPGEPQNGKII 169
              VC   G W      ++ P C+  C        G+I 
Sbjct: 125 GKYVCEADGFWTSSKGEKSLPVCEPVCGLSARTTGGQIY 163

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQSDGTWSLDI 213
            C YP  P NG + P++  Y   D   + C  GY  ++      +    CQ DG+W   +
Sbjct: 16  ACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPM 75

Query: 214 PHC 216
           P C
Sbjct: 76  PAC 78

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A Length = 403

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 13/127 (10%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRW 146
              CP P  P NGH+   P    Y +       C   + LL         T VC + G W
Sbjct: 14  AHACPYPMAPPNGHV--SPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSW 71

Query: 147 SRAPPRCKAR-CEYPGEPQNGKIIPLKFF--YDPGDHIQVTCNDGYVKPLDITPTSGPYC 203
            R  P C    C  P +  +G++  +           IQ +C + +             C
Sbjct: 72  DRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYT--MKVNDGKYVC 129

Query: 204 QSDGTWS 210
           ++DG W+
Sbjct: 130 EADGFWT 136

>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 86

 Score = 55.8 bits (134), Expect = 7e-11
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWS--- 147
            V C  P    +G +      G     A++Q++C +  + +   +   VC   G W+   
Sbjct: 5   IVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSK 64

Query: 148 --RAPPRCKARCEYPGEPQNGK 167
             ++ P C+  C        G+
Sbjct: 65  GEKSLPVCEPVCGLSARTTGGR 86

>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} Length = 86

 Score = 36.5 bits (84), Expect = 6e-04
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 7/69 (10%)

Query: 153 CKA-RCEYPGEPQNGKIIPLKF--FYDPGDHIQVTCNDGYVKPLDITPTSGPY-CQSDGT 208
                C  P +  +G++  +           IQ +C + +     +    G Y C +DG 
Sbjct: 3   MTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYT---MKVNDGKYVCDADGF 59

Query: 209 WSLDIPHCT 217
           W+      +
Sbjct: 60  WTSSKGEKS 68

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 30/131 (22%), Positives = 43/131 (32%), Gaps = 15/131 (11%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRWS 147
           + CP P       +I++     Y+        C   + L+         T VC + G W 
Sbjct: 1   IKCPQPKTLDEFTIIQNLQPQ-YQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWH 59

Query: 148 RAPPRCKAR-CEYPGEPQNGKI--IPLKFFYDPGDHIQVTCNDGYVK-----PLDITPTS 199
           RA PRCK + C  P    NG                IQ  C++ Y K         +   
Sbjct: 60  RAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQG 119

Query: 200 GPYCQSDGTWS 210
              C + G W 
Sbjct: 120 VYTCTAQGIWK 130

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 37/163 (22%), Positives = 54/163 (33%), Gaps = 32/163 (19%)

Query: 25  CPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPD------IVCQKNGSWSGAIPE 78
            PK + E   +  ++    +R + I  C  GYQL            VCQ +G+W  A+P 
Sbjct: 5   QPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPR 64

Query: 79  CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE-- 136
           C                C  P    NG      T G     A +Q+ C++ ++ +     
Sbjct: 65  C------------KIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAG 112

Query: 137 -------TIVCTETGRWSRAP-----PRCKARCEYPGEPQNGK 167
                     CT  G W         PRC   C  P  P   +
Sbjct: 113 SRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKPVNPVEQR 155

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 Length = 399

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 156 RCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQSDGTWSLD 212
           +C  P       II  L+  Y   D+   TC  GY  ++   +  +    CQ DGTW   
Sbjct: 2   KCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRA 61

Query: 213 IPHC 216
           +P C
Sbjct: 62  MPRC 65

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score = 51.5 bits (123), Expect = 5e-08
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 9/91 (9%)

Query: 85  FFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGE------ETI 138
           +   +      CP    P++G +   P+   Y     +  +C+  + +L +        I
Sbjct: 271 WRLSYRAAGNECPELQPPVHGKIE--PSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQI 328

Query: 139 VCTETGRWSRAPPRCKAR-CEYPGEPQNGKI 168
            C + G WS   P CK    +   E ++ ++
Sbjct: 329 ECLKDGTWSNKIPTCKKNEIDLESELKSEQV 359

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score = 45.0 bits (106), Expect = 7e-06
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPY--CQSDGTWSLDIP 214
           C     P +GKI P +  Y   D + V+C+ GY    D          C  DGTWS  IP
Sbjct: 282 CPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIP 341

Query: 215 HC 216
            C
Sbjct: 342 TC 343

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens} Length = 361

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 18/71 (25%)

Query: 41  NNTYRGHAIFQCSWGYQLKG------PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV 94
              ++   +  C  GY++           I C K+G+WS  IP C               
Sbjct: 299 KYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKK------------N 346

Query: 95  HCPVPALPLNG 105
              + +   + 
Sbjct: 347 EIDLESELKSE 357

>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A Length = 68

 Score = 44.7 bits (105), Expect = 5e-07
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 96  CPVPALPL-NGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
           C    L L NG +       P   GA ++F C+   HL+G    VC++ G+WS   P C+
Sbjct: 8   CSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCSQ-GQWSTPKPHCQ 66

Query: 155 A 155
            
Sbjct: 67  V 67

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
3o8e_B	252	Membrane cofactor protein; short consensus repeat,	100.0
1qub_A	319	Protein (human BETA2-glycoprotein I); short consen	100.0
1ok3_A	254	CD55, CR, DAF, complement decay-accelerating facto	100.0
2xrb_A	290	Complement regulatory protein CRRY; immune system,	100.0
3iyp_F	381	Complement decay-accelerating factor; virus, recep	100.0
2wii_C	277	H factor 1, complement factor H; immune system, su	100.0
1ntj_A	320	Complement receptor related protein; immunology, g	100.0
2c8i_E	316	CD55, complement decay-accelerating factor; picorn	100.0
1rid_A	244	Complement control protein; regulation, SCR, immun	100.0
1ntj_A	320	Complement receptor related protein; immunology, g	100.0
1ntl_A	551	CRRY-IG; immunology, complement, glycoprotein, SCR	100.0
1qub_A	319	Protein (human BETA2-glycoprotein I); short consen	100.0
2c8i_E	316	CD55, complement decay-accelerating factor; picorn	100.0
1ntl_A	551	CRRY-IG; immunology, complement, glycoprotein, SCR	100.0
3erb_A	223	Complement C2; C3/C5 convertase, short consensus r	100.0
3o8e_B	252	Membrane cofactor protein; short consensus repeat,	100.0
2wii_C	277	H factor 1, complement factor H; immune system, su	100.0
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	100.0
2gsx_A	951	Complement receptor type 2; SCR domain, CCP domain	100.0
3sw0_X	188	H factor 1, complement factor H; innate immune res	100.0
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	100.0
1rid_A	244	Complement control protein; regulation, SCR, immun	100.0
1ok3_A	254	CD55, CR, DAF, complement decay-accelerating facto	100.0
1haq_A	1213	Complement factor H; immunology, glycoprotein, com	100.0
2xrb_A	290	Complement regulatory protein CRRY; immune system,	99.98
2uwn_A	187	H factor 1, human complement factor H; alternative	99.97
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.97
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	99.97
3iyp_F	381	Complement decay-accelerating factor; virus, recep	99.97
2q7z_A	1931	Complement receptor type 1; SCR domain, blood grou	99.97
3erb_A	223	Complement C2; C3/C5 convertase, short consensus r	99.96
3gov_A	155	MAsp-1; complement, serine protease, beta barrel,	99.96
2qy0_A	159	Complement C1R subcomponent; serine protease, beta	99.94
1gkn_A	128	Complement receptor type 1; module, SCR, structure	99.93
1gkg_A	136	Complement receptor type 1; module, SCR, structure	99.93
3hrz_D	741	Complement factor B; serine protease, glycosilated	99.92
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	99.92
1ly2_A	130	CD21, complement receptor type 2; epstein BARR vir	99.92
1gkn_A	128	Complement receptor type 1; module, SCR, structure	99.92
2uwn_A	187	H factor 1, human complement factor H; alternative	99.92
1h03_P	125	Complement decay-accelerating factor; immune syste	99.92
1h03_P	125	Complement decay-accelerating factor; immune syste	99.92
1gkg_A	136	Complement receptor type 1; module, SCR, structure	99.91
1ly2_A	130	CD21, complement receptor type 2; epstein BARR vir	99.91
3gov_A	155	MAsp-1; complement, serine protease, beta barrel,	99.91
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	99.91
2a55_A	133	C4B-binding protein; complement, SCR, CCP module,	99.9
2qy0_A	159	Complement C1R subcomponent; serine protease, beta	99.9
2aty_A	376	Complement receptor chimeric conjugate CR2-IG; imm	99.9
3sw0_X	188	H factor 1, complement factor H; innate immune res	99.9
2a55_A	133	C4B-binding protein; complement, SCR, CCP module,	99.9
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	99.88
3r62_A	129	H factor 1, complement factor H; immunity, repeati	99.88
3r62_A	129	H factor 1, complement factor H; immunity, repeati	99.86
2aty_A	376	Complement receptor chimeric conjugate CR2-IG; imm	99.86
2yby_A	124	Complement factor H; immune system, complement reg	99.85
2yby_A	124	Complement factor H; immune system, complement reg	99.83
4ayi_A	125	H factor 1, complement factor H; immune system, an	99.83
4ayi_A	125	H factor 1, complement factor H; immune system, an	99.8
1zjk_A	403	Mannan-binding lectin serine protease 2; beta barr	99.78
1gpz_A	399	Complement C1R component; hydrolase, activation, i	99.75
2b5i_D	217	Interleukin-2 receptor alpha chain; four-helix bun	99.7
2ehf_A	73	CUB and sushi domain-containing protein 1; CUB and	99.66
2ehf_A	73	CUB and sushi domain-containing protein 1; CUB and	99.66
1gpz_A	399	Complement C1R component; hydrolase, activation, i	99.65
2b5i_D	217	Interleukin-2 receptor alpha chain; four-helix bun	99.63
2yra_A	74	Seizure 6-like protein isoform 3; disulfide bond,	99.59
2yra_A	74	Seizure 6-like protein isoform 3; disulfide bond,	99.52
3tvj_A	86	Mannan-binding lectin serine protease 2 A chain; i	99.49
3tvj_A	86	Mannan-binding lectin serine protease 2 A chain; i	99.45
1srz_A	68	Gamma-aminobutyric acid type B receptor, subunit 1	99.45
1srz_A	68	Gamma-aminobutyric acid type B receptor, subunit 1	99.42
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	99.11
4aqb_A	361	Mannan-binding lectin serine protease 1; blood clo	99.08
2psm_F	78	Interleukin-15 receptor alpha chain; cytokine, gly	98.47
2psm_F	78	Interleukin-15 receptor alpha chain; cytokine, gly	98.47
1elv_A	333	Complement C1S component; trypsin-like serin prote	98.09
2z3q_B	107	Interleukin-15 receptor alpha chain; protein-prote	98.03
2z3q_B	107	Interleukin-15 receptor alpha chain; protein-prote	98.01
1elv_A	333	Complement C1S component; trypsin-like serin prote	97.79
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	97.58
4f4o_C	347	Haptoglobin; globin fold, serine protease fold, co	97.27
1md8_A	329	C1R complement serine protease; innate immunity, a	97.19
1md8_A	329	C1R complement serine protease; innate immunity, a	96.08

>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*

Probab=100.00  E-value=3e-41  Score=274.10  Aligned_cols=199  Identities=26%  Similarity=0.528  Sum_probs=179.9

Q ss_pred             CceEeccCCccCC-CCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCC
Q psy14531          3 HPVFRVSQGQWSG-EVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIP   77 (222)
Q Consensus         3 ~~~~c~~~g~Ws~-~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p   77 (222)
                      .+++|+.+|+|+. ..|.|+++.|+.|+. +||.+......|.+|++|+|+|+.||.|.|+..++|+.+|   +|+.+.|
T Consensus        42 ~~~~C~~~g~Ws~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P  121 (252)
T 3o8e_B           42 THTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPP  121 (252)
T ss_dssp             CEEEBCTTSSBCCCCSTTEEECBCCCCCCCTTEEEEETTSSSBTTCEEEEEECTTEEEESCSEEEEEESSSCEEESSCCC
T ss_pred             CeEEECCCCcCCCCCCCceeeeECcCCCCCCCcEEeecCCCccCCCEEEEECCCCCeECCCCEEEEeCCCCCCeeCCCCC
Confidence            5799999999998 589999999999887 9999987767799999999999999999999999999888   8999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCC-----CCEEcCCCeEEeCcCCeeeCCCCc
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND-----RHHLLGEETIVCTETGRWSRAPPR  152 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~-----gy~~~g~~~~~C~~~g~Ws~~~p~  152 (222)
                      .|+.            +.|+.|+.+.||.+... ....|.+|++|+|+|+.     ||.|.|...++|+++|+|++..|.
T Consensus       122 ~C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~g~~~~gy~l~G~~~~~C~~~G~Ws~~~P~  188 (252)
T 3o8e_B          122 ICEK------------VLCTPPPKIKNGKHTFS-EVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPE  188 (252)
T ss_dssp             EEEE------------CEECCCCCCTTEEESST-TCCCEETTCEEEEEECCCSSSSCCEEESCSEEEBCTTSSBSSCCCE
T ss_pred             eEee------------eEcCCCCCCCCCcEecc-CCceecCCCEEEEEeCCCCCCCCeEEeCCCceEECCCCeECCCCCE
Confidence            9999            89999999999988643 35678999999999998     899999999999999999999999


Q ss_pred             ee-ecCCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        153 CK-ARCEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       153 C~-~~C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      |+ +.|..| .+.||.+.. .+..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|+|+++
T Consensus       189 C~~v~C~~P-~~~ng~~~~~~~~~~~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~v  252 (252)
T 3o8e_B          189 CKVVKCRFP-VVENGKQISGFGKKFYYKATVMFECDKGFYLDGS----DTIVCDSNSTWDPPVPKCLKV  252 (252)
T ss_dssp             EECCCBCCC-CCTTEEEEECCCSCBCTTCEEEEEECTTEEEESC----SEEEECTTSCEESCCCEEEEC
T ss_pred             EeeeecCCC-cccCCcEecCCCCccccCCEEEEEeCCCCEEcCC----CcEEECCCCeECCCCCeeeeC
Confidence            99 679987 688998764 345688899999999999999988    889999999999999999875

>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A

Probab=100.00  E-value=1.6e-39  Score=272.41  Aligned_cols=198  Identities=27%  Similarity=0.603  Sum_probs=178.1

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      ..++|+.+|.|+...|.|+++.|+.|.. +||.+..  ..+.+|++|+|+|+.||.|.|+..++|+.+|+|+.+.|.|+.
T Consensus        43 ~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~~~~--~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~  120 (319)
T 1qub_A           43 RKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRY--TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAP  120 (319)
T ss_dssp             EEEECCTTSCCCCCCCCEEECBCCCCCCCTTEEEEC--SCSBTTCEEEEEECTTEEEESCSEEEECTTSCEESCCCEEEE
T ss_pred             ceEEECCCCEECCCCCeECccCCcCCCCCCCccEec--CCcccCCEEEEECCCCceeCCCCceEECCCCeECCCCCCCcc
Confidence            3689999999999889999999999987 9999874  468899999999999999999999999999999999999999


Q ss_pred             cceeeeecccccccCCCCCCCCCceEEeCC--CCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCC
Q psy14531         82 FFFFFFFFFFNPVHCPVPALPLNGHLIEDP--TGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCE  158 (222)
Q Consensus        82 ~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~--~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~  158 (222)
                                  +.|+.|+.+.||.+....  ....|.+|++|+|+|+.||.|.|+..++|+++|+|+. .|.|+ +.|+
T Consensus       121 ------------~~C~~p~~~~~g~~~~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~~v~C~  187 (319)
T 1qub_A          121 ------------IICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LPECREVKCP  187 (319)
T ss_dssp             ------------CEECCCCCCTTEEEEECCCSBTTBEETTCEEEEEECTTEEEESCSEEEBCTTSSBSC-CCEEEECEEC
T ss_pred             ------------CcCCCCCCCCCceEEecccCCCCceecCCEEEEEeCCCceecCCCeEEECCCCeECC-CCceeccCCC
Confidence                        899999999999886532  1356889999999999999999999999999999998 89999 6799


Q ss_pred             CCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        159 YPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       159 ~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      .|+.+.||.+... +..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|+. +|+|++.+
T Consensus       188 ~p~~~~nG~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~Ws~-~P~C~~~C  245 (319)
T 1qub_A          188 FPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGP----EEIECTKLGNWSA-MPSCKASC  245 (319)
T ss_dssp             CCCCCTTEEEECCSCSSEETTCEEEEEECTTEEESSC----SEEEBCTTSSBSC-CCCEEECB
T ss_pred             CCCCCCCCeEecCCCCccccCCEEEEEcCCCCEECCC----CCeEECCCCcCCC-CCCccCcC
Confidence            9999999998743 45677899999999999999988    7899999999997 79998754

>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A

Probab=100.00  E-value=2.4e-39  Score=263.24  Aligned_cols=196  Identities=27%  Similarity=0.545  Sum_probs=174.7

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEec---cCCcccccEEEEEcCCCCeEeC--CCceEeCCCCeeeCCC
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLV---EQNNTYRGHAIFQCSWGYQLKG--PPDIVCQKNGSWSGAI   76 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~---~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g~W~~~~   76 (222)
                      .+++|+.+|+|+...|.|+ +.|+.|+. .||.+...   ...|.+|+.|+|+|+.||.|.|  +..++|+.+|+|+.+.
T Consensus        45 ~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~~  123 (254)
T 1ok3_A           45 DSVICLKGSQWSDIEEFCN-RSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAV  123 (254)
T ss_dssp             CEEEEETTTEECCCCCCEE-CCCCSCCCCSSEEECTTGGGCCCCCTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCC
T ss_pred             CEEEeCCCCCCCCCCCcCC-CCCCCCCCCCcccccccccccCcCCCCCEEEEEeCCCceeCCCCCCeEEECCCCeECCCC
Confidence            5799999999999889997 58999887 88887642   3457889999999999999986  6789999999999999


Q ss_pred             CceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCce
Q psy14531         77 PECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRC  153 (222)
Q Consensus        77 p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C  153 (222)
                      |.|+.            +.|+.|+.+.||.+..   ...+.+|++|+|+|+.||.|.|...++|+.+|   +|+...|.|
T Consensus       124 p~C~~------------~~C~~p~~~~nG~~~~---~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C  188 (254)
T 1ok3_A          124 EFCKK------------KSCPNPGEIRNGQIDV---PGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC  188 (254)
T ss_dssp             CSEEE------------CBCCCCCCCTTEEEEC---TTCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEE
T ss_pred             CeeCc------------cCCcCCCCCCCCEEEc---CCCcEEcCEEEEECCCCceeCCCcceEEEeCCCcccccCCCCcc
Confidence            99998            8999999999998863   34678999999999999999999999999988   999989999


Q ss_pred             e-ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeC---CCCcccCCCCceee
Q psy14531        154 K-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHCTN  218 (222)
Q Consensus       154 ~-~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~---~~G~W~~~~p~C~~  218 (222)
                      + +.|+.|+.+.||.+......|.+|+.|+|.|++||.+.|+    ..++|+   ++|+|++++|+|++
T Consensus       189 ~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~~~~G~Ws~~~P~C~~  253 (254)
T 1ok3_A          189 REIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECRG  253 (254)
T ss_dssp             EECBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEEEE----SEEEEEEETTEEEESSCCCEEEC
T ss_pred             ccccCCCCCCCCCceEecCCCcccCCCEEEEECCCCCeEcCC----CceEEeccCCCCEECCCCCCccc
Confidence            9 6999999999999876556778899999999999999998    789998   37999999999975

>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A

Probab=100.00  E-value=1.7e-39  Score=268.76  Aligned_cols=197  Identities=25%  Similarity=0.642  Sum_probs=176.6

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCc
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPE   78 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~   78 (222)
                      ..++|+.+|.|+...|.|+++.|+.|.. +||.+... ..+.+|+.|+|+|+.||.|.|+..++|+.+|   +|+.+.|.
T Consensus        77 ~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~G~~v~y~C~~GY~l~G~~~~~C~~~g~~~~Ws~~~P~  155 (290)
T 2xrb_A           77 FSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPI  155 (290)
T ss_dssp             EEEEECTTSCEECCTTCSCBCBCCCCCCCTTEEEEES-SCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCE
T ss_pred             CeEEECCCCeECCCCCCcCcCCCcCCCCCCCceEecC-CCcccCCEEEEECCCCceeCCCCceEEEeCCCCceeCCCCCe
Confidence            4689999999998889999999999987 99998754 5689999999999999999999999999887   89999999


Q ss_pred             eeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeC
Q psy14531         79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSR  148 (222)
Q Consensus        79 C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~  148 (222)
                      |+.            +.|+.|+.+.||.+... ....|.+|++|+|+|+.|      |.|.|...++|+.+    |+|++
T Consensus       156 C~~------------v~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~  222 (290)
T 2xrb_A          156 CES------------IPCEIPPSIPNGDFFSP-NREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSG  222 (290)
T ss_dssp             EEE------------CEECCCCCBTTEEEECS-STTCEETTCEEEEEECBCTTSCBCEEEESCSEEEEEESSSSSEEESS
T ss_pred             ecc------------ccCCCCCCCCCCeEecC-CCCccccCCEEEEEeCCCCCCcceEEecCCceeEecCCCCCCCeECC
Confidence            999            89999999999988642 356789999999999999      99999999999987    99999


Q ss_pred             CCCceee--cCCCCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        149 APPRCKA--RCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       149 ~~p~C~~--~C~~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      ..|.|+.  .|..| .+.||.+... +..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|+|++
T Consensus       223 ~~P~C~~~~~C~~p-~~~nG~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~a  290 (290)
T 2xrb_A          223 PPPQCIELNKCTPP-HVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGD----SSVYCRSLNRWEPQLPSCAA  290 (290)
T ss_dssp             CCCEEEETTEECCC-CCTTEEECSCCCSSEETTCEEEEEECTTCEEESC----SEEEEETTTEEESCCCEEEC
T ss_pred             CCCcccccccCCCC-CCCCCeEecCCCCcccCCCEEEEEcCCCCEECCC----CCeEECCCCeECCCCCeeeC
Confidence            9999984  89874 6789988743 45678899999999999999998    88999999999999999985

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}

Probab=100.00  E-value=6.4e-38  Score=267.71  Aligned_cols=199  Identities=26%  Similarity=0.539  Sum_probs=175.8

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEe---ccCCcccccEEEEEcCCCCeEeC--CCceEeCCCCeeeCCC
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTL---VEQNNTYRGHAIFQCSWGYQLKG--PPDIVCQKNGSWSGAI   76 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~---~~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g~W~~~~   76 (222)
                      ..++|+.+|+|+...|.|+. .|..|+. .|+.+..   ....|.+|+.|.|+|+.||.|.|  +..++|+.+|+|+...
T Consensus        77 ~~~~C~~dG~Ws~~~p~C~~-~C~~P~~~~~g~~~~~~~~~~~~~~Gs~v~y~C~~GY~l~g~~~~~~tC~~~g~Ws~~~  155 (381)
T 3iyp_F           77 DSVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAV  155 (381)
T ss_dssp             CEEEEETTTEECCCCCCEEE-BCCSCCCCSSEEECTTGGGCCCCBTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCC
T ss_pred             CeEEECCCCcccccCCcccc-cCCCCccccCCcccccccCCCcccCCCEEEEEcCCCcccCCCCCceEEecCCCcCcccC
Confidence            46899999999998899986 8999887 8887753   23457889999999999999987  5789999999999999


Q ss_pred             CceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCce
Q psy14531         77 PECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRC  153 (222)
Q Consensus        77 p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C  153 (222)
                      |.|+.            +.|+.|+.+.||.+..   ...+.+|++++|+|+.||.|.|...++|+.+|   +|++..|.|
T Consensus       156 p~C~~------------~~C~~p~~~~nG~~~~---~~~~~~Gs~v~y~C~~GY~L~G~~~~~C~~~G~~~~Ws~~~P~C  220 (381)
T 3iyp_F          156 EFCKK------------KSCPNPGEIRNGQIDV---PGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC  220 (381)
T ss_dssp             CSEEE------------CBCCCCCCCTTEEEEC---SSCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEE
T ss_pred             ceecc------------ccCCCCCccCCCceec---CCCcCcCCEEEEEeCCCcccCCccceEEecCCCcceEcCCCCee
Confidence            99999            8999999999999863   34578899999999999999999999999888   899989999


Q ss_pred             e-ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeC---CCCcccCCCCceeeCcC
Q psy14531        154 K-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ---SDGTWSLDIPHCTNYTD  221 (222)
Q Consensus       154 ~-~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~---~~G~W~~~~p~C~~~~~  221 (222)
                      + +.|..|+.+.||.+......|.+|+.|+|.|++||.+.|+    ..++|+   ++|+|++++|.|+++..
T Consensus       221 ~~v~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~----~~~~C~~~~~~G~Ws~~~P~C~~~~~  288 (381)
T 3iyp_F          221 REIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECRGKSL  288 (381)
T ss_dssp             EECBCCCCCCCTTEEEETCCSCCBTTCEEEEEECTTCEEESC----SEEEEECTTSSCEESSCCCEEEC---
T ss_pred             eeeecCCCCCCCCCeEecCCCCeecCCEEEEEeCCCCEeCCC----CcEEecccCCCCEEcCCCCeEeCCCC
Confidence            9 6899999999999887666788899999999999999998    899998   47999999999998753

>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A

Probab=100.00  E-value=2.3e-38  Score=260.45  Aligned_cols=196  Identities=29%  Similarity=0.633  Sum_probs=172.0

Q ss_pred             CceEeccCCccCCCCCe--eEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCce-EeCCCCeeeCCCC
Q psy14531          3 HPVFRVSQGQWSGEVPT--CQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDI-VCQKNGSWSGAIP   77 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~--C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~-~C~~~g~W~~~~p   77 (222)
                      ..++| .+|.|+...|.  |+.+.|+.|+. +||.+... ...|.+|+.|+|+|+.||.|.|...+ +|+.+| |+.+.|
T Consensus        49 ~~~~C-~~g~Ws~~~P~~~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~~~P  126 (277)
T 2wii_C           49 IIMVC-RKGEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTNDIP  126 (277)
T ss_dssp             EEEEE-CSSSEEESCSSCCCEECBCCCCCCCTTEEEEEESSSSSBTTCEEEEEECTTEEEESSCCEEEBCSSS-BCSCCC
T ss_pred             ceEEc-CCCeeeCCCCCccccccCCcCCCCCCCCEEEecCCCcccCCCEEEEEcCCCceEeCCCceeEeCCCC-cCCCCC
Confidence            35677 59999987654  99999999987 99998765 35688999999999999999999887 999999 999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeC--CCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIED--PTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-  154 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~--~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-  154 (222)
                      .|+.            +.|+.|+.+.||.+...  .....|.+|++|+|+|+.||.|.|...++|+.+|+|++..|.|+ 
T Consensus       127 ~C~~------------~~C~~p~~~~nG~~~~~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~  194 (277)
T 2wii_C          127 ICEV------------VKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVE  194 (277)
T ss_dssp             EEEE------------CEECCCCCCTTEECCSSSSCTTCCEETTBEEECEECTTEEEESCSEEEBCTTSSBSSCCCEEEE
T ss_pred             cccc------------eeCCCCCcccCCeEEecccccCCcccCCCEEEEEcCCCccCcCCCCCEECCCCeECCCCCeeee
Confidence            9998            89999999999987642  12467899999999999999999999999999999999899999 


Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      +.|..| .+.||.+...+..|.+|++|+|.|++||.+.|+    ..++|+. |+|++. |+|+++
T Consensus       195 v~C~~p-~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~C~~-g~Ws~~-P~C~~~  252 (277)
T 2wii_C          195 ISCKSP-DVINGSPISQKIIYKENERFQYKCNMGYEYSER----GDAVCTE-SGWRPL-PSCEEA  252 (277)
T ss_dssp             CEECCC-CCTTEEESSCCCCEETTCEEEEEECTTEEESSC----SEEEEET-TEESSC-CCEEEC
T ss_pred             eeCCCC-CCCCCeEccCCCCCcCCCEEEEEcCCCCeECCC----CCeEccC-CccCCC-CEEcCC
Confidence            579976 577998876556688899999999999999888    7899986 999988 999987

>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}

Probab=100.00  E-value=1.4e-37  Score=260.72  Aligned_cols=198  Identities=25%  Similarity=0.633  Sum_probs=176.5

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCc
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPE   78 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~   78 (222)
                      ..++|+.+|.|+...|.|+++.|+.|.. +||.+... ..+.+|+.|+|+|+.||.|.|...++|+.+|   +|+.+.|.
T Consensus        44 ~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~  122 (320)
T 1ntj_A           44 FSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPI  122 (320)
T ss_pred             CeEEECCCCEECCCCCccccccCcCCCCCCCCEEECC-CCcccCCEEEEEcCCCCEECCCCceEEEeCCCCeeeCCCCCc
Confidence            4689999999998889999999999977 99998753 5689999999999999999999999999887   89999999


Q ss_pred             eeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeC
Q psy14531         79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSR  148 (222)
Q Consensus        79 C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~  148 (222)
                      |+.            +.|+.|+.+.||.+... ....|.+|++|+|+|+.|      |.|.|...++|+++    |+|++
T Consensus       123 C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~  189 (320)
T 1ntj_A          123 CES------------IPCEIPPSIPNGDFFSP-NREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSG  189 (320)
T ss_pred             CcC------------CCCCCCCCCCCCcEecC-CCCccccCCEEEEECCCCCCCcceEEEeCCCceEEecCCCCCCEECC
Confidence            999            89999999999987642 246789999999999999      99999999999987    99999


Q ss_pred             CCCcee--ecCCCCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        149 APPRCK--ARCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       149 ~~p~C~--~~C~~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      ..|.|+  ..|..| .+.||.+... +..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|.|+++
T Consensus       190 ~~P~C~~~~~C~~p-~~~ng~~~~~~~~~~~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~  258 (320)
T 1ntj_A          190 PPPQCIELNKCTPP-HVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGD----SSVYCRSLNRWEPQLPSCFKV  258 (320)
T ss_pred             CCccccccCCCCCC-CCCCCeEeCCCCCcccCCCEEEEECCCCCeECCC----CCcEECCCCeECCCCCeeEcc
Confidence            899998  489875 6789987743 45688899999999999999988    789999999999999999874

>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A

Probab=100.00  E-value=7e-39  Score=258.98  Aligned_cols=191  Identities=26%  Similarity=0.592  Sum_probs=171.8

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCC----CeeeCCCC
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKN----GSWSGAIP   77 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~----g~W~~~~p   77 (222)
                      ..++| .+|.|+.. |.|+++.|+.|+. +||.+..  ..+.+|+.|+|+|+.||.|.|...++|+.+    |+|+.+.|
T Consensus        47 ~~~~C-~~g~Ws~~-p~C~~~~C~~p~~~~nG~~~~--~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~g~~g~Ws~~~p  122 (244)
T 1rid_A           47 IYAKC-TGTGWTLF-NQCIKRRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAP  122 (244)
T ss_dssp             SSEEE-ETTEEESC-CCEECCCCCCCCCCSSCBCCC--CCCSSCCCBCCBCCSSCEESSCSSBCBCCSSSSCCSBSSCSC
T ss_pred             CeEEc-CCCcCCCC-CeeeeCCCcCCCCCCCCEEeC--CCcccCCEEEEECCCCCeECCCcceEEECCCCCccccCCCCC
Confidence            57899 99999977 9999999999987 9999876  778999999999999999999999999876    79999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ec
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-AR  156 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~  156 (222)
                      .|+.            +.|+.|+.+.||.+.  .....|.+|++|+|+|+.||.|.|...++|++ |+|+ ..|.|+ +.
T Consensus       123 ~C~~------------~~C~~p~~~~nG~~~--~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~-g~Ws-~~P~C~~~~  186 (244)
T 1rid_A          123 ICES------------VKCQSPPSISNGRHN--GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWS-DPPTCQIVK  186 (244)
T ss_dssp             CEES------------SCCCSCCCCSSCEEC--CSSSSCCSSCCBCEECCSSCEEECSSSBCCSS-SCCC-SCCEEESCC
T ss_pred             eecc------------CcCcCCCCCCCCEEe--cCCCceecCCeEEEEeCCCCeeCCCCceEECC-CccC-CCCeeeeee
Confidence            9999            899999999999886  23567899999999999999999999999997 9999 799998 78


Q ss_pred             CCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        157 CEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       157 C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      |..| .+.||.+.. .+..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|+|+.
T Consensus       187 C~~p-~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~  244 (244)
T 1rid_A          187 CPHP-TISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGS----SSSTCSPGNTWKPELPKCVR  244 (244)
T ss_dssp             CCCC-CCSSCBCCSSCCSSCCSCCCCCCBCSSSCEEESC----SCCEEETTTEEESCCCEEEC
T ss_pred             CcCC-CCcCCeeccCCCCcccCCCEEEEEcCCCCEECCC----CCeEECCCCeECCCCCEeeC
Confidence            9976 678887753 345678899999999999999988    78999999999999999973

>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}

Probab=100.00  E-value=4.6e-36  Score=251.51  Aligned_cols=197  Identities=25%  Similarity=0.565  Sum_probs=171.3

Q ss_pred             CceEeccCC---ccCCCCCeeEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCC------CeEeCCCceEeCCC--
Q psy14531          3 HPVFRVSQG---QWSGEVPTCQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWG------YQLKGPPDIVCQKN--   69 (222)
Q Consensus         3 ~~~~c~~~g---~Ws~~~p~C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~--   69 (222)
                      ..++|+.+|   .|+...|.|+.+.|+.|+. +||.+... ...|.+|++|+|+|+.|      |.|.|...++|+.+  
T Consensus       103 ~~~~C~~~g~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~  182 (320)
T 1ntj_A          103 SSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDG  182 (320)
T ss_pred             CceEEEeCCCCeeeCCCCCcCcCCCCCCCCCCCCCcEecCCCCccccCCEEEEECCCCCCCcceEEEeCCCceEEecCCC
Confidence            468999988   8999899999999999877 99988753 35688999999999999      99999999999987  


Q ss_pred             --CeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeee
Q psy14531         70 --GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWS  147 (222)
Q Consensus        70 --g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws  147 (222)
                        |+|+++.|.|+..           +.|+.| .+.||.+... ....|.+|++|+|+|+.||.|.|...++|+++|+|+
T Consensus       183 ~~G~Ws~~~P~C~~~-----------~~C~~p-~~~ng~~~~~-~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~Ws  249 (320)
T 1ntj_A          183 QVGVWSGPPPQCIEL-----------NKCTPP-HVENAVIVSK-NKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWE  249 (320)
T ss_pred             CCCEECCCCcccccc-----------CCCCCC-CCCCCeEeCC-CCCcccCCCEEEEECCCCCeECCCCCcEECCCCeEC
Confidence              9999999999851           589874 6679987642 356789999999999999999999999999999999


Q ss_pred             CCCCceee--cCCCCC-CCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCc---ccCCCCcee
Q psy14531        148 RAPPRCKA--RCEYPG-EPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCT  217 (222)
Q Consensus       148 ~~~p~C~~--~C~~p~-~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~---W~~~~p~C~  217 (222)
                      +..|.|+.  .|..|+ .+.||.+... ..|.+|+.|+|.|++||++.|+    ..++|+.+|+   |++++|+|+
T Consensus       250 ~~~P~C~~~~~C~~p~~~~~ng~~~~~-~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~~~~Ws~~~P~C~  320 (320)
T 1ntj_A          250 PQLPSCFKVKSCGAFLGELPNGHVFVP-QNLQLGAKVTFVCNTGYQLKGN----SSSHCVLDGVESIWNSSVPVCE  320 (320)
T ss_pred             CCCCeeEcccccCCCCCCCCCCeEecC-CCcccCCEEEEEcCCCCEECCC----CcCEeeCCCCcCccCCCCCccC
Confidence            88999994  698774 6789987643 3677899999999999999988    7899999999   999999995

>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}

Probab=100.00  E-value=3.2e-36  Score=269.18  Aligned_cols=199  Identities=24%  Similarity=0.582  Sum_probs=179.8

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCc
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPE   78 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~   78 (222)
                      ..++|+.+|.|+...|.|+.+.|+.|.. +||.+... ..+.+|+.++|+|+.||.|.|...++|+.+|   +|+.+.|.
T Consensus        42 ~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~ng~~~~~-~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~  120 (551)
T 1ntl_A           42 FSITCKQDSTWTSAEDKCIRKQCKTPSDPENGLVHVH-TGIEFGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAPI  120 (551)
T ss_pred             ceEEECCCCeECCCCCCcccCCCcCCCCCCCcEEEcC-CCcccCCEEEEECCCCCEECCCccEEEEeCCCcceeCCCCCC
Confidence            4689999999999889999999999977 99998753 5689999999999999999999999999988   89999999


Q ss_pred             eeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeC
Q psy14531         79 CNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSR  148 (222)
Q Consensus        79 C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~  148 (222)
                      |+.            +.|+.|+.+.||.+... ....|.+|++|+|+|+.|      |.|.|...++|+.+    |+|++
T Consensus       121 C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~  187 (551)
T 1ntl_A          121 CEW------------IPCEIPPGIPNGDFFSS-TREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSNDGEIGVWSG  187 (551)
T ss_pred             CCC------------CCCCCCCcCCCCcEecC-CCCccccCCEEEEEeCCCCCccceeEecCCcceEeeCCCCcCCEECC
Confidence            999            89999999999988642 246789999999999999      89999999999987    99999


Q ss_pred             CCCcee--ecCCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        149 APPRCK--ARCEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       149 ~~p~C~--~~C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      ..|.|+  ..|..|+.+.||.+.. .+..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|+|.++
T Consensus       188 ~~P~C~~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~  257 (551)
T 1ntl_A          188 PPPQCIELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPGFIMKGA----SSVHCQSLNKWEPELPSCFKG  257 (551)
T ss_pred             CCCcccCccccCCCCCCCCceEeCCCCCcccCCCEEEEECCCCCEEcCC----CCeEECCCCeECCCCcccccc
Confidence            999998  4899998999998875 345688899999999999999988    789999999999999999876

>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A

Probab=100.00  E-value=4.9e-36  Score=251.17  Aligned_cols=196  Identities=32%  Similarity=0.615  Sum_probs=167.8

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEec----cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCC
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLV----EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIP   77 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~----~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p   77 (222)
                      ..++|+.+|.|+...|.|+.+.|+.|.. .||.+...    ...+.+|++|+|+|+.||.|.|+..++|+.+|+|+. .|
T Consensus       101 ~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws~-~P  179 (319)
T 1qub_A          101 DSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LP  179 (319)
T ss_dssp             SEEEECTTSCEESCCCEEEECEECCCCCCTTEEEEECCCSBTTBEETTCEEEEEECTTEEEESCSEEEBCTTSSBSC-CC
T ss_pred             CceEECCCCeECCCCCCCccCcCCCCCCCCCceEEecccCCCCceecCCEEEEEeCCCceecCCCeEEECCCCeECC-CC
Confidence            5689999999999899999999999988 89988753    245789999999999999999999999999999996 89


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecC
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARC  157 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C  157 (222)
                      .|+.            +.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+++|+|+. .|.|+..|
T Consensus       180 ~C~~------------v~C~~p~~~~nG~~~~~-~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~~~C  245 (319)
T 1qub_A          180 ECRE------------VKCPFPSRPDNGFVNYP-AKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSA-MPSCKASC  245 (319)
T ss_dssp             EEEE------------CEECCCCCCTTEEEECC-SCSSEETTCEEEEEECTTEEESSCSEEEBCTTSSBSC-CCCEEECB
T ss_pred             ceec------------cCCCCCCCCCCCeEecC-CCCccccCCEEEEEcCCCCEECCCCCeEECCCCcCCC-CCCccCcC
Confidence            9999            89999999999988643 3567899999999999999999999999999999998 89999889


Q ss_pred             CCCCC----CCCeEEec----CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        158 EYPGE----PQNGKIIP----LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       158 ~~p~~----~~~g~~~~----~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      ..|..    +.+|....    .+..|.+|+.|.|.|+.||.+.+..   ..++|+ +|+|+  +|.|..+
T Consensus       246 ~~p~~~~~~~~~g~~~~~~~~~~~~~~~g~~v~f~C~~g~~~~~~~---~~~~C~-~G~w~--~P~C~~~  309 (319)
T 1qub_A          246 KVPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYT---EDAQCI-DGTIE--VPKCFKE  309 (319)
T ss_dssp             CCSSSSCEEESSSSEEEHHHHTTTCBCTTCEEEEEEEETTTTEEEE---EEEECB-TTBCC--CCTTCCC
T ss_pred             CCCccccccccCCceeeccccccCcccCCCEEEEEeCCCCccccCC---cCCEec-CCcCc--CCcccCC
Confidence            88753    23444331    2456889999999999999876531   578998 89994  7999754

>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}

Probab=100.00  E-value=2.4e-35  Score=263.58  Aligned_cols=201  Identities=25%  Similarity=0.554  Sum_probs=177.9

Q ss_pred             CceEeccCC---ccCCCCCeeEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCC------CeEeCCCceEeCCC--
Q psy14531          3 HPVFRVSQG---QWSGEVPTCQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWG------YQLKGPPDIVCQKN--   69 (222)
Q Consensus         3 ~~~~c~~~g---~Ws~~~p~C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~--   69 (222)
                      ..++|..+|   .|+...|.|+.+.|+.|+. +||.+... ...|.+|+.|+|+|+.|      |.|.|+..++|+.+  
T Consensus       101 ~~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~  180 (551)
T 1ntl_A          101 SSAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSNDG  180 (551)
T ss_pred             ccEEEEeCCCcceeCCCCCCCCCCCCCCCCcCCCCcEecCCCCccccCCEEEEEeCCCCCccceeEecCCcceEeeCCCC
Confidence            468999998   8999899999999999877 99988754 35688999999999999      89999999999987  


Q ss_pred             --CeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeee
Q psy14531         70 --GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWS  147 (222)
Q Consensus        70 --g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws  147 (222)
                        |+|+++.|.|+..           +.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+.+|+|+
T Consensus       181 ~~G~Ws~~~P~C~~~-----------~~C~~p~~~~ng~~~~~-~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws  248 (551)
T 1ntl_A          181 EIGVWSGPPPQCIEL-----------NKCTPPPYVENAVMLSE-NRSLFSLRDIVEFRCHPGFIMKGASSVHCQSLNKWE  248 (551)
T ss_pred             cCCEECCCCCcccCc-----------cccCCCCCCCCceEeCC-CCCcccCCCEEEEECCCCCEEcCCCCeEECCCCeEC
Confidence              9999999999841           58999999999987642 356788999999999999999999999999999999


Q ss_pred             CCCCceee--cCCCCCCCCCeEEe-cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        148 RAPPRCKA--RCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       148 ~~~p~C~~--~C~~p~~~~~g~~~-~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      +..|.|+.  .|..|+.+.||.+. .....|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++.+|.|..+
T Consensus       249 ~~~P~C~~~~~C~~p~~~~~g~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g~W~~~~p~C~~~  319 (551)
T 1ntl_A          249 PELPSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGYTLEGS----SQSQCQSDGSWNPLLAKCVSR  319 (551)
T ss_pred             CCCccccccccCCCCCcCCCCccccCCCCCcccCCEEEEEcCCCcEecCC----cceEEeCCCeECCCCCeeeee
Confidence            98999994  69999899999877 3344688899999999999999888    789999899999999999764

>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}

Probab=100.00  E-value=8.1e-35  Score=232.18  Aligned_cols=174  Identities=27%  Similarity=0.557  Sum_probs=153.3

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCC-------CCceeccceeeeecccccc
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGA-------IPECNAFFFFFFFFFFNPV   94 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~-------~p~C~~~~~~~~~~~~~~~   94 (222)
                      +.|+.|+. +||.+... ..+.+|+.|+|+|+.||.|.| ..++|+.+|+|+.+       .|.|+.            +
T Consensus         2 ~~C~~p~~~~nG~~~~~-~~~~~g~~~~y~C~~Gy~l~g-~~~~C~~~G~Ws~~~~~~~~~~p~C~~------------~   67 (223)
T 3erb_A            2 PSCPQNVNISGGTFTLS-HGWAPGSLLTYSCPQGLYPSP-ASRLCKSSGQWQTPGATRSLSKAVCKP------------V   67 (223)
T ss_dssp             -CCCSCCCCBTCEEEES-STTSTTCEEEEECCTTEEEES-CEEEECTTSCEECC-------CCEEEE------------C
T ss_pred             CcCcCCCCCCCCEEecC-CCCcCCCEEEEECCCCCeecC-CeeEECCCCeECCCccCCCCCCCeEee------------e
Confidence            46998877 99999865 468999999999999999999 45999999999984       899999            8


Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee---ecCCCCCCCCCeEEecC
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQNGKIIPL  171 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~---~~C~~p~~~~~g~~~~~  171 (222)
                      .|+.|+.+.||.+..  ....|.+|++++|+|+.||.|.|...++|+.+|+|+...|.|+   +.|+.|.. .+|.+.. 
T Consensus        68 ~C~~p~~~~nG~~~~--~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~~~C~~p~~-~~g~~~~-  143 (223)
T 3erb_A           68 RCPAPVSFENGIYTP--RLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGI-SLGAVRT-  143 (223)
T ss_dssp             EEECCSCCTTEEEES--CCSEEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEECSCSSSCCCCC-CTTEEEE-
T ss_pred             ECcCCCCCCCCEEec--CCCCccCCCEEEEEeCCCCEEcCCCceEECCCCeECCCCCEEEeCCccCcCCCC-CCCcEec-
Confidence            999999999998863  2467899999999999999999999999999999999999999   58998854 4555543 


Q ss_pred             ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        172 KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       172 ~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      ...|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|+|++
T Consensus       144 ~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~Ws~~~P~C~~  186 (223)
T 3erb_A          144 GFRFGHGDKVRYRCSSNLVLTGS----SERECQGNGVWSGTEPICRQ  186 (223)
T ss_dssp             CCCCSTTCEEEEEECTTCEEESC----SEEEBCTTSCBSSCCCEEEC
T ss_pred             CCCCCCCCEEEEEeCCCCEEcCC----CceEECCCCeECCCCCEEeC
Confidence            24677899999999999999988    78999999999999999997

>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*

Probab=100.00  E-value=6.8e-34  Score=230.80  Aligned_cols=178  Identities=27%  Similarity=0.546  Sum_probs=157.2

Q ss_pred             CCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCC--CceEeCCCCeeeC-CCCceeccceeeeecccccccCCCC
Q psy14531         25 CPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGP--PDIVCQKNGSWSG-AIPECNAFFFFFFFFFFNPVHCPVP   99 (222)
Q Consensus        25 C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~--~~~~C~~~g~W~~-~~p~C~~~~~~~~~~~~~~~~C~~p   99 (222)
                      |..|+. .|+.+... ...|.+|++|+|+|+.||.|.|+  ..++|+.+|+|+. +.|.|+.            +.|+.|
T Consensus         1 C~~PP~~~~~~~~~~~~~~y~~g~~~~y~C~~Gy~~~g~~~~~~~C~~~g~Ws~~~~p~C~~------------~~C~~p   68 (252)
T 3o8e_B            1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYR------------ETCPYI   68 (252)
T ss_dssp             CCSCCCCSSEEESSCCCSSCCTTCEEEEEECTTEEECSSSCCEEEBCTTSSBCCCCSTTEEE------------CBCCCC
T ss_pred             CCCCCCCCcccCcCCcCCcCCCCCEEEEEcCCCccCCCCCCCeEEECCCCcCCCCCCCceee------------eECcCC
Confidence            677777 88887643 45689999999999999999864  7899999999998 5899998            899999


Q ss_pred             CCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee-ecCCCCCCCCCeEEecC-ccc
Q psy14531        100 ALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK-ARCEYPGEPQNGKIIPL-KFF  174 (222)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~-~~C~~p~~~~~g~~~~~-~~~  174 (222)
                      +.+.||.+...  ...|.+|++++|+|+.||.|.|+..++|+.+|   +|+...|.|+ +.|..|+.+.||.+... ...
T Consensus        69 ~~~~nG~~~~~--~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~  146 (252)
T 3o8e_B           69 RDPLNGQAVPA--NGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEV  146 (252)
T ss_dssp             CCCTTEEEEET--TSSSBTTCEEEEEECTTEEEESCSEEEEEESSSCEEESSCCCEEEECEECCCCCCTTEEESSTTCCC
T ss_pred             CCCCCcEEeec--CCCccCCCEEEEECCCCCeECCCCEEEEeCCCCCCeeCCCCCeEeeeEcCCCCCCCCCcEeccCCce
Confidence            99999998753  45689999999999999999999999999988   8999999999 68999999999998743 346


Q ss_pred             cCCCCeEEEEcCC-----CCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        175 YDPGDHIQVTCND-----GYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       175 ~~~g~~v~y~C~~-----gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      |.+|+.|+|.|+.     ||.+.|.    ..++|+.+|+|++++|.|+++.
T Consensus       147 ~~~g~~v~y~C~~g~~~~gy~l~G~----~~~~C~~~G~Ws~~~P~C~~v~  193 (252)
T 3o8e_B          147 FEYLDAVTYSCDPAPGPDPFSLIGE----STIYCGDNSVWSRAAPECKVVK  193 (252)
T ss_dssp             EETTCEEEEEECCCSSSSCCEEESC----SEEEBCTTSSBSSCCCEEECCC
T ss_pred             ecCCCEEEEEeCCCCCCCCeEEeCC----CceEECCCCeECCCCCEEeeee
Confidence            7789999999998     8999988    7899999999999999998763

>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A

Probab=100.00  E-value=1.5e-33  Score=231.80  Aligned_cols=179  Identities=28%  Similarity=0.582  Sum_probs=154.8

Q ss_pred             EeeCCCCcc-CCCeEEe---ccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCc--eeccceeeeeccccccc
Q psy14531         22 QIICPKIVV-ENPYLTL---VEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPE--CNAFFFFFFFFFFNPVH   95 (222)
Q Consensus        22 ~~~C~~p~~-~ng~~~~---~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~--C~~~~~~~~~~~~~~~~   95 (222)
                      ...|+.|+. .|+.+..   ....|.+|++++|+|+.||.|.|...++|. +|+|+...|.  |+.            +.
T Consensus         5 ~~~C~~pp~~~n~~i~~g~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~~~P~~~C~~------------~~   71 (277)
T 2wii_C            5 AEDCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCR-KGEWVALNPLRKCQK------------RP   71 (277)
T ss_dssp             ---CCSCCCCCSSEEECSCCCCSSCCTTCEEEEEECTTEECSSCEEEEEC-SSSEEESCSSCCCEE------------CB
T ss_pred             cccCcCCCCCccccccccccccCCcCCCCEEEEEcCCCCcCCCCceEEcC-CCeeeCCCCCccccc------------cC
Confidence            356998766 8887653   235688999999999999999999999997 9999987664  988            89


Q ss_pred             CCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeE-EeCcCCeeeCCCCcee-ecCCCCCCCCCeEEec---
Q psy14531         96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETI-VCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIP---  170 (222)
Q Consensus        96 C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~-~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~---  170 (222)
                      |+.|+.+.||.+... ....|.+|++++|+|+.||.|.|...+ +|+.+| |+...|.|+ +.|..|+.+.||.+..   
T Consensus        72 C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~  149 (277)
T 2wii_C           72 CGHPGDTPFGTFTLT-GGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTNDIPICEVVKCLPVTAPENGKIVSSAM  149 (277)
T ss_dssp             CCCCCCCTTEEEEEE-SSSSSBTTCEEEEEECTTEEEESSCCEEEBCSSS-BCSCCCEEEECEECCCCCCTTEECCSSSS
T ss_pred             CcCCCCCCCCEEEec-CCCcccCCCEEEEEcCCCceEeCCCceeEeCCCC-cCCCCCcccceeCCCCCcccCCeEEeccc
Confidence            999999999988643 246789999999999999999999886 999999 999999999 7899999999999876   


Q ss_pred             -CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        171 -LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       171 -~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                       ....|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|.|+++
T Consensus       150 ~~~~~~~~g~~v~y~C~~Gy~L~G~----~~~~C~~~G~Ws~~~P~C~~v  195 (277)
T 2wii_C          150 EPDREYHFGQAVRFVCNSGYKIEGD----EEMHCSDDGFWSKEKPKCVEI  195 (277)
T ss_dssp             CTTCCEETTBEEECEECTTEEEESC----SEEEBCTTSSBSSCCCEEEEC
T ss_pred             ccCCcccCCCEEEEEcCCCccCcCC----CCCEECCCCeECCCCCeeeee
Confidence             345677899999999999999988    789999999999999999986

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}

Probab=100.00  E-value=5e-33  Score=262.18  Aligned_cols=201  Identities=26%  Similarity=0.599  Sum_probs=172.1

Q ss_pred             CceEeccC----CccCCCCCeeEE----eeCCCCccCCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeee
Q psy14531          3 HPVFRVSQ----GQWSGEVPTCQQ----IICPKIVVENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWS   73 (222)
Q Consensus         3 ~~~~c~~~----g~Ws~~~p~C~~----~~C~~p~~~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~   73 (222)
                      .+++|+.+    |.|+...|.|+.    +.|+.|.++||.+... ...|.+|+.|+|+|+.||.|.|+..++|+.+|+|+
T Consensus       738 ~~~~C~~~~~g~g~Ws~~~P~C~~~~~~~~C~~p~i~ng~~~~~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws  817 (951)
T 2gsx_A          738 KKLQCRSDSKGHGSWSGPSPQCLRSPPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWV  817 (951)
T ss_pred             cceEEccCCCCCCcCCCCCCcccccCCCccCCCCcCCCCceecCCCCccccCCEEEEEcCCCcEEeCCceeEEccCCeEC
Confidence            46899998    999999999998    7899976688886543 24688999999999999999999999999999999


Q ss_pred             CCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCce
Q psy14531         74 GAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC  153 (222)
Q Consensus        74 ~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C  153 (222)
                      ...|.|+..         ..+.|..|+.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+.+|+|+...|.|
T Consensus       818 ~~~P~C~~~---------~~~~C~~pp~~~ng~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C  887 (951)
T 2gsx_A          818 PGVPTCIKK---------AFIGCPPPPKTPNGNHTGG-NIARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHC  887 (951)
T ss_pred             CCCceeecc---------cccCCCCCCcCCcceeeCC-ccccccCCCEEEEEcCCCCEECCCCeeEECCCCEECCCCcee
Confidence            999999861         1147999999999987632 245688999999999999999999999999999999989999


Q ss_pred             e-ecCCCCCCCCCeEEe--cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        154 K-ARCEYPGEPQNGKII--PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       154 ~-~~C~~p~~~~~g~~~--~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      + +.|..|..+ ++...  .....|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++++|+|+.
T Consensus       888 ~~~~C~~p~~~-~~~~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~p~C~~  950 (951)
T 2gsx_A          888 KEVNCSSPADM-DGIQKGLEPRKMYQYGAVVTLECEDGYMLEGS----PQSQCQSDHQWNPPLAVCRS  950 (951)
T ss_pred             eeeeCCCCCCC-CCcccccccCCcCcCCCEEEEEcCCCCeECCC----CceEECCCCeECCCCCeecC
Confidence            9 679988654 44332  1223678899999999999999988    78999999999999999975

>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}

Probab=100.00  E-value=6e-33  Score=261.64  Aligned_cols=211  Identities=26%  Similarity=0.489  Sum_probs=178.3

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEecc-CCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVE-QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN   80 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~-~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~   80 (222)
                      ..++|+.+|+|+...|.|+++ |+.|+. +||.+.... ..|.+|+.|+|+|+.||.|.|...++|+.+|+|+.+.|.|+
T Consensus       369 ~~~~C~~~G~Ws~~~P~C~~~-C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~p~C~  447 (951)
T 2gsx_A          369 KQIRCNAQGTWEPSAPVCEKE-CQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQCK  447 (951)
T ss_pred             CceEECCCCcCCCCCcccccc-cCCCCcccCCeEecCCCcccCCCCEEEEEcCCCCEECCCCCeEECCCCcCCCCCCccc
Confidence            578999999999999999998 999887 999987543 24777999999999999999999999999999999889996


Q ss_pred             ccceeee-----------------ec---------------------------ccccccCCCCCCCCCceEEeCCCCCCc
Q psy14531         81 AFFFFFF-----------------FF---------------------------FFNPVHCPVPALPLNGHLIEDPTGGPY  116 (222)
Q Consensus        81 ~~~~~~~-----------------~~---------------------------~~~~~~C~~p~~~~~g~~~~~~~~~~~  116 (222)
                      ...+-..                 .|                           .-..+.|++|+.+.||.+.... ...|
T Consensus       448 ~~~C~~~~~~~~~~~~~~~~~~~~~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C~~i~C~~pp~i~nG~~~~~~-~~~~  526 (951)
T 2gsx_A          448 VAACEATGRQLLTKPQHQFVRPDVNSSCGEGYKLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSS-LEDF  526 (951)
T ss_pred             eeeCCCCCcccccCCCCceecCeEEEEcCCCcEEcCCCeeEccCcccccCCCceecceeCCCCCCCCCCeEeCCC-CCcc
Confidence            5221100                 00                           0135789999999999886432 3468


Q ss_pred             CCCCEEEEEcCCC------CEEcCCCeEEeC----cCCeeeCCCCce-----eecCCCCCCCCCeEEecCccccCCCCeE
Q psy14531        117 RVGAILQFACNDR------HHLLGEETIVCT----ETGRWSRAPPRC-----KARCEYPGEPQNGKIIPLKFFYDPGDHI  181 (222)
Q Consensus       117 ~~g~~~~~~C~~g------y~~~g~~~~~C~----~~g~Ws~~~p~C-----~~~C~~p~~~~~g~~~~~~~~~~~g~~v  181 (222)
                      .+|++|+|+|+.|      |.|.|...++|+    ++|+|+...|.|     .+.|..|..+.++.+...+..|.+|+.|
T Consensus       527 ~~g~~v~y~C~~g~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~~~~~~~~g~~v  606 (951)
T 2gsx_A          527 PYGTTVTYTCNPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEAPYFYNDTV  606 (951)
T ss_pred             ccCCEEEEEcCCCCCCCceEEEecCceEEecccCCCCccCcCCCceeecCCCccCCcCCCCCCCceEeCCCCcccCCCEE
Confidence            9999999999999      999999999998    899999989999     3689998776666666666678889999


Q ss_pred             EEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        182 QVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       182 ~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      +|.|++||.+.|+    ..++|+.+|+|++++|+|+++
T Consensus       607 ~~~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~  640 (951)
T 2gsx_A          607 TFKCYSGFTLKGS----SQIRCKADNTWDPEIPVCEKE  640 (951)
T ss_pred             EEEeCCCCEEcCC----CceEECCCCCCCCCCCcceec
Confidence            9999999999988    889999999999999999885

>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}

Probab=100.00  E-value=8.9e-34  Score=220.52  Aligned_cols=176  Identities=23%  Similarity=0.546  Sum_probs=146.9

Q ss_pred             EeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccc--cCC
Q psy14531         22 QIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV--HCP   97 (222)
Q Consensus        22 ~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~--~C~   97 (222)
                      ++.|+.|+. +||.+... ...|.+|++|+|+|+.||.|.|+..++|+ +|+|+. .|.|+.            +  .|+
T Consensus         2 ~v~C~~pp~~~ng~~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~-~p~C~~------------~~~~C~   67 (188)
T 3sw0_X            2 GTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-NGNWTE-PPQCKD------------STGKCG   67 (188)
T ss_dssp             CCCBCSCCCCTTEEECSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCEEEC------------TTCCBC
T ss_pred             cCcCcCCCCCCCCEEecccCCcccCCCEEEEECCCCCEECCCCEEEeC-CCEeCC-CCccCc------------CCCcCC
Confidence            467999887 99988753 35688999999999999999999999999 999995 699998            6  899


Q ss_pred             CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecCCCCCCCCCe---EEec--Cc
Q psy14531         98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNG---KIIP--LK  172 (222)
Q Consensus        98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g---~~~~--~~  172 (222)
                      .|+.+.||.+... ....|.+|++++|+|+.||.|.|+..++|+ +|+|+. .|.|+..|..|..+.++   .+..  ..
T Consensus        68 ~p~~~~ng~~~~~-~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~C~~~C~~p~~~~~~~~~~~~~~~~~  144 (188)
T 3sw0_X           68 PPPPIDNGDITSF-PLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSE-PPKCLHPCVISREIMENYNIALRWTAKQ  144 (188)
T ss_dssp             SCCCCTTEEESSC-CCSCBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCEEECCEECCHHHHHHHTEEESCCSSC
T ss_pred             CCCccCCCeEecC-CCCcccCCCEEEEEcCCCCEECCCCeEEcC-CCccCC-CCcccccCCCChHHhccCceeeeccccc
Confidence            9999999988642 256789999999999999999999999999 999998 69999999988766533   2221  22


Q ss_pred             ccc-CCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        173 FFY-DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       173 ~~~-~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      ..| .+|+.|+|.|++||.+.|+... ..++|+ +|+|  .+|+|+.
T Consensus       145 ~~y~~~g~~v~~~C~~Gy~l~G~~~~-~~~~C~-~g~w--~~P~C~~  187 (188)
T 3sw0_X          145 KLYSRTGESVEFVCKRGYRLSSRSHT-LRTTCW-DGKL--EYPTCAK  187 (188)
T ss_dssp             CCEECTTCEEEEEECTTCEECTTCCC-SEEECB-TTBC--CCCCEEC
T ss_pred             cccccCCCEEEEECCCCceeCCCCCC-eEeEcC-CCcE--eCCceec
Confidence            233 7899999999999999987211 289998 8999  4799975

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A

Probab=100.00  E-value=1.8e-32  Score=263.29  Aligned_cols=197  Identities=29%  Similarity=0.658  Sum_probs=172.1

Q ss_pred             CceEeccCCccCCCCC--eeEEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCc-eEeCCCCeeeCCCC
Q psy14531          3 HPVFRVSQGQWSGEVP--TCQQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPD-IVCQKNGSWSGAIP   77 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p--~C~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~-~~C~~~g~W~~~~p   77 (222)
                      ..++| .+|.|+...|  .|+++.|+.|.. +||.+... ...+.+|++|+|+|+.||.|.|+.. ++|+.+| |+++.|
T Consensus        44 ~~~~C-~~g~Ws~~~p~~~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~~~f~C~~Gy~L~G~~~~~~C~~~g-Ws~~~P  121 (1213)
T 1haq_A           44 VIMVC-RKGEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTNDIP  121 (1213)
T ss_pred             CeEEc-CCCcccCCCCCCceEeCCCcCCCCCCCCEEEeccCCccccCCEEEEEeCCCCeEccccceeEECCCC-ccCCCC
Confidence            35677 6999998654  699999999987 99998764 3468899999999999999999876 7999999 999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCC--CCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDP--TGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-  154 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~--~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-  154 (222)
                      .|+.            +.|++|+.+.||.+....  ....|.+|++|+|+|+.||.|.|...++|+++|+|+...|.|+ 
T Consensus       122 ~C~~------------i~C~~~~~p~nG~~~~~~~~~~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~  189 (1213)
T 1haq_A          122 ICEV------------VKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVE  189 (1213)
T ss_pred             Ceec------------cccCCCCCCCCCeEeccccccCCccccCCEEEEEcCCCCEEcCCCceEECCCCcCCCCCCEEEe
Confidence            9999            899999999999886321  1356889999999999999999999999999999999999999 


Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      +.|+.| .+.||.+...+..|..|+.|+|.|++||.+.|.    ..++|+.+| |++ +|+|+++.
T Consensus       190 v~C~~p-~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g-Ws~-~P~C~~~~  248 (1213)
T 1haq_A          190 ISCKSP-DVINGSPISQKIIYKENERFQYKCNMGYEYSER----GDAVCTESG-WRP-LPSCEEKS  248 (1213)
T ss_pred             cccCCC-CCCCCeEecCCCccCCCCEEEEEcCCCCEECCC----CCeEECCCC-ccC-CCcccCcc
Confidence            789976 467998887667888899999999999999988    789999999 995 79998753

>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A

Probab=100.00  E-value=3e-33  Score=225.99  Aligned_cols=173  Identities=27%  Similarity=0.516  Sum_probs=153.2

Q ss_pred             eCCCCcc-CCCeEEecc-----CCcccccEEEEEcCCCCeEeCC--CceEeCCCCeeeCCCCceeccceeeeeccccccc
Q psy14531         24 ICPKIVV-ENPYLTLVE-----QNNTYRGHAIFQCSWGYQLKGP--PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVH   95 (222)
Q Consensus        24 ~C~~p~~-~ng~~~~~~-----~~~~~g~~~~~~C~~gy~l~G~--~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~   95 (222)
                      .|+.|+. +|+.+....     ..|.+|++|+|+|+.||.|.|.  ..++| .+|+|+.. |.|+.            +.
T Consensus         1 ~C~~PP~~~n~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~~~g~~~~~~~C-~~g~Ws~~-p~C~~------------~~   66 (244)
T 1rid_A            1 CCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKC-TGTGWTLF-NQCIK------------RR   66 (244)
T ss_dssp             CCCCCCCCSSSCBCCSSCCCSSCCCSSCCEECCBCCTTCEECSSCSSSEEE-ETTEEESC-CCEEC------------CC
T ss_pred             CcCCCCCCCccEecCCccccccCccCCCCEEEEEeCCCCeEcCCCCCeEEc-CCCcCCCC-Ceeee------------CC
Confidence            3888777 899876532     5688999999999999999876  89999 89999976 99998            79


Q ss_pred             CCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcC----CeeeCCCCcee-ecCCCCCCCCCeEEec
Q psy14531         96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET----GRWSRAPPRCK-ARCEYPGEPQNGKIIP  170 (222)
Q Consensus        96 C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~----g~Ws~~~p~C~-~~C~~p~~~~~g~~~~  170 (222)
                      |+.|+.+.||.+..    ..|.+|++++|+|+.||.|.|...++|+.+    |+|+...|.|+ +.|+.|+.+.||.+..
T Consensus        67 C~~p~~~~nG~~~~----~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~g~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~  142 (244)
T 1rid_A           67 CPSPRDIDNGQLDI----GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNG  142 (244)
T ss_dssp             CCCCCCCSSCBCCC----CCCSSCCCBCCBCCSSCEESSCSSBCBCCSSSSCCSBSSCSCCEESSCCCSCCCCSSCEECC
T ss_pred             CcCCCCCCCCEEeC----CCcccCCEEEEECCCCCeECCCcceEEECCCCCccccCCCCCeeccCcCcCCCCCCCCEEec
Confidence            99999999998763    678899999999999999999999999876    79999899999 6899999999999986


Q ss_pred             CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       171 ~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      ....|.+|+.|+|.|++||.+.|+    ..++|+. |+|+ ++|.|+++.
T Consensus       143 ~~~~~~~g~~v~y~C~~Gy~l~G~----~~~~C~~-g~Ws-~~P~C~~~~  186 (244)
T 1rid_A          143 YEDFYTDGSVVTYSCNSGYSLIGN----SGVLCSG-GEWS-DPPTCQIVK  186 (244)
T ss_dssp             SSSSCCSSCCBCEECCSSCEEECS----SSBCCSS-SCCC-SCCEEESCC
T ss_pred             CCCceecCCeEEEEeCCCCeeCCC----CceEECC-CccC-CCCeeeeee
Confidence            556788899999999999999988    7899986 9999 899998653

>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A

Probab=100.00  E-value=1.9e-32  Score=222.57  Aligned_cols=180  Identities=24%  Similarity=0.445  Sum_probs=154.9

Q ss_pred             eeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEe-CC-CceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531         23 IICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLK-GP-PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV   98 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~-G~-~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~   98 (222)
                      +.|..|+. +||.+... ...|.+|++|+|+|+.||.|. |. ..++|+.+|+|+...|.|+.             .|+.
T Consensus         2 ~~C~~Pp~i~ng~~~~~~~~~~~~g~~v~y~C~~Gy~~~~G~~~~~~C~~~g~Ws~~~p~C~~-------------~C~~   68 (254)
T 1ok3_A            2 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-------------SCEV   68 (254)
T ss_dssp             CEECSCCCCTTEEECCTTCSCEETTCEEEEEECTTCEECTTSCCEEEEETTTEECCCCCCEEC-------------CCCS
T ss_pred             CCCCCCCcCCcceecCCcCcccCCCCEEEEEcCCCcEeCCCCCCEEEeCCCCCCCCCCCcCCC-------------CCCC
Confidence            46898887 99988643 245788999999999999986 64 68999999999998999977             8999


Q ss_pred             CCCCCCceEEeC-CCCCCcCCCCEEEEEcCCCCEEcC--CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCccc
Q psy14531         99 PALPLNGHLIED-PTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKFF  174 (222)
Q Consensus        99 p~~~~~g~~~~~-~~~~~~~~g~~~~~~C~~gy~~~g--~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~  174 (222)
                      |+.+.||.+... .....|.+|++|+|+|+.||.+.|  ...++|+.+|+|+...|.|+ +.|..|+.+.||.+.... .
T Consensus        69 p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~-~  147 (254)
T 1ok3_A           69 PTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPG-G  147 (254)
T ss_dssp             CCCCSSEEECTTGGGCCCCCTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEECTT-C
T ss_pred             CCCCCcccccccccccCcCCCCCEEEEEeCCCceeCCCCCCeEEECCCCeECCCCCeeCccCCcCCCCCCCCEEEcCC-C
Confidence            999899987532 124568899999999999999986  57899999999999899999 799999999999987532 4


Q ss_pred             cCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeCc
Q psy14531        175 YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNYT  220 (222)
Q Consensus       175 ~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~~  220 (222)
                      +.+|+.|+|.|++||.+.|.    ..++|+.+|   +|++++|.|+++.
T Consensus       148 ~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~~~~Ws~~~P~C~~v~  192 (254)
T 1ok3_A          148 ILFGATISFSCNTGYKLFGS----TSSFCLISGSSVQWSDPLPECREIY  192 (254)
T ss_dssp             SBTTCEEEEEECTTEEEESC----SEEEEEEETTEEEESSCCCEEEECB
T ss_pred             cEEcCEEEEECCCCceeCCC----cceEEEeCCCcccccCCCCcccccc
Confidence            56799999999999999988    889999888   8999999999864

>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A

Probab=100.00  E-value=2.8e-32  Score=262.02  Aligned_cols=194  Identities=23%  Similarity=0.511  Sum_probs=174.3

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee-
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN-   80 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~-   80 (222)
                      ..++|+.+| |+. .|.|.++.|+.|.. .||.+......|.+|++|+|+|++||.|.|+..++|+.+ .|+.+.|.|+ 
T Consensus       531 ~~~~C~~~g-Ws~-~p~C~~~~C~~p~~~~~g~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~-~Ws~~~P~C~~  607 (1213)
T 1haq_A          531 GSIVCGYNG-WSD-LPICYERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQCYHF-GLSPDLPICKE  607 (1213)
T ss_pred             cceEecCCC-CCC-CCeeecccCCCCCccCCCccccccCccccCCEEEEEcCCCCEEcCCceeEEecC-cEeCCCCccee
Confidence            469999999 996 69999999999988 898877666778999999999999999999999999955 5999999995 


Q ss_pred             -ccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCce--e-ec
Q psy14531         81 -AFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC--K-AR  156 (222)
Q Consensus        81 -~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C--~-~~  156 (222)
                       .            +.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|...++|++ |+|+. .|.|  + +.
T Consensus       608 ~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~-G~Ws~-~P~C~~~~~~  672 (1213)
T 1haq_A          608 QV------------QSCGPPPELLNGNVKEK-TKEEYGHSEVVEYYCNPRFLMKGPNKIQCVD-GEWTT-LPVCIVEEST  672 (1213)
T ss_pred             ec------------ccCcCCCCCCCCeEecc-cCccccCCCEEEEEeCCCceEcCCCeEEeCC-CeeCC-CcccccccCc
Confidence             4            78999999999998743 2467899999999999999999999999996 99999 9999  5 78


Q ss_pred             CCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeCc
Q psy14531        157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       157 C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~~  220 (222)
                      |+.|+.+.||.+......|.+|+.|+|.|++||.+.|.    ..++| .+|+|+ ++|+|+++.
T Consensus       673 C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~----~~~~C-~~G~Ws-~~p~C~~~~  730 (1213)
T 1haq_A          673 CGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGH----RSITC-IHGVWT-QLPQCVAID  730 (1213)
T ss_pred             CCCCCcCCCCeeccCCCcccCCCEEEEEeCCCceeCCC----CeEEC-CCCCcc-Ccccccccc
Confidence            99999999999887666788999999999999999988    88999 799999 899998875

>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A

Probab=99.98  E-value=4.5e-32  Score=224.26  Aligned_cols=177  Identities=24%  Similarity=0.483  Sum_probs=154.2

Q ss_pred             EeeCCCCcc-CCCeEEec--cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531         22 QIICPKIVV-ENPYLTLV--EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV   98 (222)
Q Consensus        22 ~~~C~~p~~-~ng~~~~~--~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~   98 (222)
                      ...|+.|+. +|+.+...  ...|.+|+.++|+|+.|| +.|...++|+.+|+|+...|.|+.            +.|+.
T Consensus        35 ~~~C~~pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~~------------~~C~~  101 (290)
T 2xrb_A           35 LGQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCIR------------KQCET  101 (290)
T ss_dssp             --CBCSCCCCSSEEESSCCSCSCBCTTCEEEEEECTTB-CCCEEEEEECTTSCEECCTTCSCB------------CBCCC
T ss_pred             cccccCCCCCCccccccccccCcccCCCEEEEEccCCc-CCCCCeEEECCCCeECCCCCCcCc------------CCCcC
Confidence            356999887 89887543  246889999999999999 566678999999999998999999            89999


Q ss_pred             CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee-ecCCCCCCCCCeEEecC-cc
Q psy14531         99 PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK-ARCEYPGEPQNGKIIPL-KF  173 (222)
Q Consensus        99 p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~-~~C~~p~~~~~g~~~~~-~~  173 (222)
                      |+.+.||.+..   ...|.+|++|+|+|+.||.|.|...++|+.+|   +|++..|.|+ +.|+.|+.+.||.+... ..
T Consensus       102 p~~~~nG~~~~---~~~~~~G~~v~y~C~~GY~l~G~~~~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~  178 (290)
T 2xrb_A          102 PLDPQNGIVHV---NTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNRE  178 (290)
T ss_dssp             CCCCTTEEEEE---SSCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEECEECCCCCBTTEEEECSSTT
T ss_pred             CCCCCCceEec---CCCcccCCEEEEECCCCceeCCCCceEEEeCCCCceeCCCCCeeccccCCCCCCCCCCeEecCCCC
Confidence            99999999864   34678999999999999999999999999888   8999899999 68999999999998753 34


Q ss_pred             ccCCCCeEEEEcCCC------CeeccCCCCCCcceeCCC----CcccCCCCceee
Q psy14531        174 FYDPGDHIQVTCNDG------YVKPLDITPTSGPYCQSD----GTWSLDIPHCTN  218 (222)
Q Consensus       174 ~~~~g~~v~y~C~~g------y~~~~~~~~~~~~~C~~~----G~W~~~~p~C~~  218 (222)
                      .|.+|+.|+|.|++|      |.+.|+    ..++|+.+    |+|+++.|+|+.
T Consensus       179 ~~~~g~~v~y~C~~G~~~~~~y~l~G~----~~~~C~~~~~~~G~Ws~~~P~C~~  229 (290)
T 2xrb_A          179 DFHYGMVVTYQCNTDARGKKLFNLVGE----PSIHCTSIDGQVGVWSGPPPQCIE  229 (290)
T ss_dssp             CEETTCEEEEEECBCTTSCBCEEEESC----SEEEEEESSSSSEEESSCCCEEEE
T ss_pred             ccccCCEEEEEeCCCCCCcceEEecCC----ceeEecCCCCCCCeECCCCCcccc
Confidence            677899999999999      888888    78999976    999999999986

>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A

Probab=99.97  E-value=7.6e-33  Score=215.07  Aligned_cols=173  Identities=27%  Similarity=0.505  Sum_probs=144.2

Q ss_pred             EeeCCCCccCCCeEEec---cCC--cccccEEEEEcCCCCeEeCCC---ceEeCCCCeeeCCCCceeccceeeeeccccc
Q psy14531         22 QIICPKIVVENPYLTLV---EQN--NTYRGHAIFQCSWGYQLKGPP---DIVCQKNGSWSGAIPECNAFFFFFFFFFFNP   93 (222)
Q Consensus        22 ~~~C~~p~~~ng~~~~~---~~~--~~~g~~~~~~C~~gy~l~G~~---~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~   93 (222)
                      .+.|+.|.++||.+...   ...  |.+|+.|+|+|+.||.|.|..   .++|+.+| |+...| |+.            
T Consensus         3 ~~~C~~P~~~nG~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~~~-C~~------------   68 (187)
T 2uwn_A            3 LKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVP-CLR------------   68 (187)
T ss_dssp             CCCBCCCCCTTEEETTHHHHTTTCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EESSSC-CEE------------
T ss_pred             ccCCCCCccccceEeccccccccccccCCCEEEEECCCCcEecCCccCCEEEeCCCC-CCCCCC-cCC------------
Confidence            35798876699998753   122  368999999999999999984   89999999 997766 987            


Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc-CCCeEEeCcCCeeeCCCCcee-e-cCCC-CCCCCCeEEe
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL-GEETIVCTETGRWSRAPPRCK-A-RCEY-PGEPQNGKII  169 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~-g~~~~~C~~~g~Ws~~~p~C~-~-~C~~-p~~~~~g~~~  169 (222)
                       .|+.| .+.||.+.  .....|.+|++|+|+|+.||.|. |...++|+++| |++ .|.|+ + .|+. |+.+.||.+.
T Consensus        69 -~C~~p-~~~ng~~~--~~~~~~~~g~~v~~~C~~Gy~l~~G~~~~~C~~~g-Ws~-~P~C~~v~~C~~~p~~~~nG~~~  142 (187)
T 2uwn_A           69 -KCYFP-YLENGYNQ--NHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP-TPRCIRVKTCSKSSIDIENGFIS  142 (187)
T ss_dssp             -EEECC-CCTTEECS--CTTCEEETTCEEECEECTTEECSSSCSEEEEETTE-EES-CSCCEECCEEEGGGCCCSSEECC
T ss_pred             -cCcCC-CCCccEEc--CCCccccCCCEEEEEcCCCCCccCCCeEEEecCCC-cCC-CCceeecccCCCCCccccCceEc
Confidence             79875 56799864  23567889999999999999997 89999999999 998 79999 4 7998 5789999887


Q ss_pred             cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        170 PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       170 ~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      ..+..|.+|+.|+|.|++||.+.|...+ ..++|+.+| |++ .|+|+
T Consensus       143 ~~~~~y~~g~~v~~~C~~Gy~l~g~~~s-~~~~C~~~g-Ws~-~P~Ci  187 (187)
T 2uwn_A          143 ESQYTYALKEKAKYQCKLGYVTADGETS-GSITCGKDG-WSA-QPTCI  187 (187)
T ss_dssp             SCCSEEETTCEEEEEECTTCCCSSSCSE-EEEEEETTE-ESC-CCCCC
T ss_pred             CCCccCcCCCEEEEECCCCCEecCCCCc-CeEEECCCC-cCC-CCccC
Confidence            6566788899999999999999874111 579999999 999 89984

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.97  E-value=4.3e-31  Score=243.17  Aligned_cols=177  Identities=27%  Similarity=0.494  Sum_probs=153.6

Q ss_pred             eeEEeeCC-CCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCC---------CCceeccceeee
Q psy14531         19 TCQQIICP-KIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGA---------IPECNAFFFFFF   87 (222)
Q Consensus        19 ~C~~~~C~-~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~---------~p~C~~~~~~~~   87 (222)
                      .|..+.|+ .+.. .||.+..    +.+|++++|+|+.||.|.|+..++|+.+|+|+..         .|.|+.      
T Consensus         6 ~c~~~~C~~~~~~~~~g~~~~----~~~g~~~~y~C~~Gy~l~g~~~~~C~~~g~Ws~~~~~~~~~~~~p~C~~------   75 (741)
T 3hrz_D            6 ARPQGSCSLEGVEIKGGSFRL----LQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRA------   75 (741)
T ss_dssp             -----CCCCTTCCCBTSEEEE----EGGGTEEEEECCTTEEEESCSEEEBCTTSCBCCEECTTCCEESCCEEEE------
T ss_pred             cCCCCCCCCCCccCCCCeeee----ccCCCEEEEEeCCCCEECCCCeEEECCCCcCCCCCcccccCcCCCeEEe------
Confidence            68889999 5544 8888864    4589999999999999999999999999999974         789999      


Q ss_pred             ecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee---ecCCCCCCCC
Q psy14531         88 FFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK---ARCEYPGEPQ  164 (222)
Q Consensus        88 ~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~---~~C~~p~~~~  164 (222)
                            +.|+.|+.+.||.+..  ....|.+|++++|+|+.||.|.|+..++|+.+|+|++..|.|+   ..|+.|..+.
T Consensus        76 ------~~C~~p~~~~ng~~~~--~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C~~~~~~C~~p~~~~  147 (741)
T 3hrz_D           76 ------IHCPRPHDFENGEYWP--RSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPI  147 (741)
T ss_dssp             ------CEECCCSCCTTEEEEC--CCSSEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEECSCSSSCCCCCCT
T ss_pred             ------eECcCCCCCCCCEEec--cCCCcccCCEEEEEECCCCccCCCcceEecCCCeEccCcCeeeccCCcCCCCCCCC
Confidence                  8999999999999864  3567899999999999999999999999999999999999999   5799998777


Q ss_pred             CeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        165 NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       165 ~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      ++....  ..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|+++.|+|.+.
T Consensus       148 ~~~~~~--~~~~~g~~v~~~C~~gy~l~G~----~~~~C~~~g~Ws~~~p~C~~~  196 (741)
T 3hrz_D          148 GTRKVG--SQYRLEDSVTYHCSRGLTLRGS----QRRTCQEGGSWSGTEPSCQDS  196 (741)
T ss_dssp             TEEEEC--CCCSTTCEEEEEECTTSEEESC----SEEEBCTTSSBSSCCCEEECT
T ss_pred             CCeeeC--CccccCCEEEEEcCCCCEEcCC----CeEEECCCCEEeCCCccccCC
Confidence            776654  3577899999999999999998    889999999999999999985

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}

Probab=99.97  E-value=4.7e-31  Score=262.27  Aligned_cols=199  Identities=26%  Similarity=0.595  Sum_probs=175.5

Q ss_pred             CceEeccCCc---cCCCCCeeEEeeCCCCcc-CCCeEEecc-CCcccccEEEEEcCCC------CeEeCCCceEeCCC--
Q psy14531          3 HPVFRVSQGQ---WSGEVPTCQQIICPKIVV-ENPYLTLVE-QNNTYRGHAIFQCSWG------YQLKGPPDIVCQKN--   69 (222)
Q Consensus         3 ~~~~c~~~g~---Ws~~~p~C~~~~C~~p~~-~ng~~~~~~-~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~--   69 (222)
                      ..++|+.+|+   |+...|.|+++.|+.|+. +||.+.... ..|.+|++|+|+|+.|      |.|.|...++|+.+  
T Consensus       550 ~~~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~i~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~  629 (1931)
T 2q7z_A          550 SSAECILSGNAAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDD  629 (1931)
T ss_pred             cceEEEeCCCeeecCCCCceeEeeeCCCCCCcCCceEECCCCCCcccCCEEEEEECCCCCcccceEEeCCceeEeCCCCC
Confidence            4589999986   999999999999999877 999987543 4578999999999999      77999999999987  


Q ss_pred             --CeeeCCCCcee-ccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCee
Q psy14531         70 --GSWSGAIPECN-AFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRW  146 (222)
Q Consensus        70 --g~W~~~~p~C~-~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~W  146 (222)
                        |+|+.+.|.|+ .            +.|+ ++.+.||.+... ....|.+|++|+|+|+.||.|.|+..++|+++|+|
T Consensus       630 ~~G~Ws~~~P~C~~~------------~~C~-~P~i~nG~~~~~-~~~~y~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~W  695 (1931)
T 2q7z_A          630 QVGIWSGPAPQCIIP------------NKCT-PPNVENGILVSD-NRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKW  695 (1931)
T ss_pred             cCceECCCCCcCCcC------------cccC-CCcccCCeEecC-CCcccccCCEEEEEcCCCceEcCCCceEECCCCcC
Confidence              99999999999 6            7995 455679987532 35678999999999999999999999999999999


Q ss_pred             eCCCCceeecCCCCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        147 SRAPPRCKARCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       147 s~~~p~C~~~C~~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      +...|.|++.|..|+.+.||.+... +..|.+|+.|+|.|+.||.+.|+    ..++|+.+|+|++..|+|+.+
T Consensus       696 s~~~P~C~~~C~~~p~~~~g~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~----~~~~C~~~G~Ws~~~P~C~~~  765 (1931)
T 2q7z_A          696 EPELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGA----ASMRCTPQGDWSPAAPTCEVK  765 (1931)
T ss_pred             CCCCCccccccCCCCCCCCcccccCCCCcccCCCEEEEECCCCCeeCCC----CeeEECCCCeECCCCCccccc
Confidence            9988999999999989999987643 45788999999999999999988    789999999999999999864

>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}

Probab=99.97  E-value=8.9e-31  Score=223.57  Aligned_cols=181  Identities=24%  Similarity=0.429  Sum_probs=155.6

Q ss_pred             EeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEe-C-CCceEeCCCCeeeCCCCceeccceeeeecccccccCC
Q psy14531         22 QIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLK-G-PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCP   97 (222)
Q Consensus        22 ~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~-G-~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~   97 (222)
                      ...|+.|+. +||.+... ...|.+|+.|+|+|+.||.|. | ...++|+.||+|+...|.|+.             .|.
T Consensus        33 ~~~C~~PP~i~ng~~~~~~~~~y~~G~~v~y~C~~Gy~l~~G~~~~~~C~~dG~Ws~~~p~C~~-------------~C~   99 (381)
T 3iyp_F           33 WQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-------------SCE   99 (381)
T ss_dssp             -CEECSCCCCTTEEECCTTCSCEETTCEEEEEECTTEEECTTSCCEEEEETTTEECCCCCCEEE-------------BCC
T ss_pred             cccCcCCCCCCCCEEecCCCccccCCCEEEEEcCCCCEecCCCCCeEEECCCCcccccCCcccc-------------cCC
Confidence            346999887 99988643 346788999999999999997 6 468999999999998899987             899


Q ss_pred             CCCCCCCceEEeC-CCCCCcCCCCEEEEEcCCCCEEcC--CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCcc
Q psy14531         98 VPALPLNGHLIED-PTGGPYRVGAILQFACNDRHHLLG--EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKF  173 (222)
Q Consensus        98 ~p~~~~~g~~~~~-~~~~~~~~g~~~~~~C~~gy~~~g--~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~  173 (222)
                      .|+.+.|+.+... .....|.+|++++|+|+.||.+.|  ...++|+++|+|+...|.|+ +.|..|+.+.||.+... .
T Consensus       100 ~P~~~~~g~~~~~~~~~~~~~~Gs~v~y~C~~GY~l~g~~~~~~tC~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~  178 (381)
T 3iyp_F          100 VPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVP-G  178 (381)
T ss_dssp             SCCCCSSEEECTTGGGCCCCBTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEECS-S
T ss_pred             CCccccCCcccccccCCCcccCCCEEEEEcCCCcccCCCCCceEEecCCCcCcccCceeccccCCCCCccCCCceecC-C
Confidence            9998888876422 125678999999999999999987  57899999999999899999 79999999999998754 2


Q ss_pred             ccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeCc
Q psy14531        174 FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNYT  220 (222)
Q Consensus       174 ~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~~  220 (222)
                      .|.+|+.|+|.|++||.+.|.    ..++|+.+|   +|++..|.|+++.
T Consensus       179 ~~~~Gs~v~y~C~~GY~L~G~----~~~~C~~~G~~~~Ws~~~P~C~~v~  224 (381)
T 3iyp_F          179 GILFGATISFSCNTGYKLFGS----TSSFCLISGSSVQWSDPLPECREIY  224 (381)
T ss_dssp             CSBTTCEEEEEECTTEEEESC----SEEEEEEETTEEEESSCCCEEEECB
T ss_pred             CcCcCCEEEEEeCCCcccCCc----cceEEecCCCcceEcCCCCeeeeee
Confidence            456799999999999999988    899999888   8999999999874

>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}

Probab=99.97  E-value=1.7e-30  Score=258.22  Aligned_cols=199  Identities=23%  Similarity=0.556  Sum_probs=176.8

Q ss_pred             CCceEeccCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCe---eeCCCC
Q psy14531          2 THPVFRVSQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIP   77 (222)
Q Consensus         2 ~~~~~c~~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~---W~~~~p   77 (222)
                      +..++|+.+|+|+...|.|+++.|..|+. .||.+.. ...+.+|+.|+|+|+.||.|.|...++|+.+|+   |+.+.|
T Consensus       940 ~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~-~~~~~~gs~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P 1018 (1931)
T 2q7z_A          940 PFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHV-ITDIQVGSRINYSCTTGHRLIGHSSAECILSGNTAHWSTKPP 1018 (1931)
T ss_pred             CceeEeCCCCccCCCCCeeeccccCCCCCCCCceeec-cCCcccCCEEEEEeCCCcEECCccceEEEeCCcccccCCCCc
Confidence            35789999999999999999999999988 9999854 356889999999999999999999999998888   999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----Ceee
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWS  147 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws  147 (222)
                      .|+.            +.|+.|+.+.||.+... ....|.+|++|+|+|+.|      |.|+|...++|+++    |+|+
T Consensus      1019 ~C~~------------~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws 1085 (1931)
T 2q7z_A         1019 ICQR------------IPCGLPPTIANGDFIST-NRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWS 1085 (1931)
T ss_pred             eeee------------ecCCCCCCCCCCceecc-cCCcccCCCEEEEEcCCCCCccceeEEcCCcceEEecCCCccceec
Confidence            9999            89999999999988643 246789999999999999      89999999999988    9999


Q ss_pred             CCCCcee--ecCCCCCCCCCeEEe-cCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        148 RAPPRCK--ARCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       148 ~~~p~C~--~~C~~p~~~~~g~~~-~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      +..|.|+  ..|..| .+.||.+. ..+..|.+|++|+|.|++||.+.|.    ..++|+.+|+|++.+|+|+++
T Consensus      1086 ~~~P~C~~~~~C~~p-~~~ng~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~~~ 1155 (1931)
T 2q7z_A         1086 GPAPQCIIPNKCTPP-NVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGP----RRVKCQALNKWEPELPSCSRV 1155 (1931)
T ss_pred             CCCCCCccCCcCCCC-CccCCeeecCCCccccCCCEEEEEcCCCcEecCC----ceeEECCCCeECCCCCccccc
Confidence            9999998  589876 46777665 3455688899999999999999988    789999999999999999875

>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}

Probab=99.96  E-value=7.6e-29  Score=197.58  Aligned_cols=154  Identities=27%  Similarity=0.588  Sum_probs=129.7

Q ss_pred             ceEeccCCccCC-------CCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCC
Q psy14531          4 PVFRVSQGQWSG-------EVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGA   75 (222)
Q Consensus         4 ~~~c~~~g~Ws~-------~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~   75 (222)
                      .++|+.+|+|+.       ..|.|+.+.|+.|.. +||.+......|.+|+.++|+|+.||.|.|+..++|+.+|+|+.+
T Consensus        41 ~~~C~~~G~Ws~~~~~~~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~  120 (223)
T 3erb_A           41 SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGE  120 (223)
T ss_dssp             EEEECTTSCEECC-------CCEEEECEEECCSCCTTEEEESCCSEEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSC
T ss_pred             eeEECCCCeECCCccCCCCCCCeEeeeECcCCCCCCCCEEecCCCCccCCCEEEEEeCCCCEEcCCCceEECCCCeECCC
Confidence            489999999998       379999999999877 999998665678899999999999999999999999999999999


Q ss_pred             CCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceee
Q psy14531         76 IPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA  155 (222)
Q Consensus        76 ~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~  155 (222)
                      .|.|+.          ..+.|+.|..+ ++.+..   ...|.+|++|+|+|+.||.|.|+..++|+++|+|++..|.|+.
T Consensus       121 ~P~C~~----------~~~~C~~p~~~-~g~~~~---~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~  186 (223)
T 3erb_A          121 TAVCDN----------GAGHCPNPGIS-LGAVRT---GFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGTEPICRQ  186 (223)
T ss_dssp             CCEEEC----------SCSSSCCCCCC-TTEEEE---CCCCSTTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEEC
T ss_pred             CCEEEe----------CCccCcCCCCC-CCcEec---CCCCCCCCEEEEEeCCCCEEcCCCceEECCCCeECCCCCEEeC
Confidence            999985          01489988654 666553   4678899999999999999999999999999999999999994


Q ss_pred             --cCCCCCCCCCeEEecC
Q psy14531        156 --RCEYPGEPQNGKIIPL  171 (222)
Q Consensus       156 --~C~~p~~~~~g~~~~~  171 (222)
                        .|..|+.+.+|.....
T Consensus       187 ~~~C~~P~~i~~g~~~s~  204 (223)
T 3erb_A          187 PYSYDFPEDVAPALGTSF  204 (223)
T ss_dssp             GGGGGCCSSCC-------
T ss_pred             CccCCCccchhhhHHHHH
Confidence              8999999999887643

>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A

Probab=99.96  E-value=5e-28  Score=182.42  Aligned_cols=136  Identities=20%  Similarity=0.499  Sum_probs=118.6

Q ss_pred             eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCC------ceEeCCCCeeeCCCCceeccceeeeeccc
Q psy14531         19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP------DIVCQKNGSWSGAIPECNAFFFFFFFFFF   91 (222)
Q Consensus        19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~------~~~C~~~g~W~~~~p~C~~~~~~~~~~~~   91 (222)
                      .|+.+.|+.|.. +||.+......|.+|+.|+|+|+.||.|.|..      .++|+.+|+|+.+.|.|+.          
T Consensus         2 s~~~i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~----------   71 (155)
T 3gov_A            2 SMTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKI----------   71 (155)
T ss_dssp             ---CCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEE----------
T ss_pred             CccceeCCCCCCCCCCEEecCCCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeeeE----------
Confidence            478899999988 99999877678999999999999999999876      8999999999999999999          


Q ss_pred             ccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEc--CCCeEEeCcCCeeeC-----CCCceeecCCCCCCC
Q psy14531         92 NPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLL--GEETIVCTETGRWSR-----APPRCKARCEYPGEP  163 (222)
Q Consensus        92 ~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~--g~~~~~C~~~g~Ws~-----~~p~C~~~C~~p~~~  163 (222)
                        +.|+.|+.+.||.+........|.+|++|+|+|+.|| .|.  |+..++|+++|+|++     ..|.|+..|+.|..+
T Consensus        72 --~~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y~C~~Gy~~l~~~G~~~~~C~~~G~Ws~~~~~~~~P~C~~vC~~P~~p  149 (155)
T 3gov_A           72 --VDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGVWMNKVLGRSLPTCLPVCGLPKFS  149 (155)
T ss_dssp             --CBCCSCCCCTTEEEEESSTTCCCBTTCEEEEEECTTTEEECTTCCCEEEECTTSCEEBTTTBTSCCCEEECCSCCSSC
T ss_pred             --ccCCCCCCCcCceEEecCCCCccccCCEEEEEeCCChhhhccCCCceEEECCCCeECCCcCCCCCCcCCCccCCCCCC
Confidence              8999999999999875444677899999999999997 787  789999999999998     799999669999876


Q ss_pred             CCe
Q psy14531        164 QNG  166 (222)
Q Consensus       164 ~~g  166 (222)
                      .++
T Consensus       150 ~~~  152 (155)
T 3gov_A          150 RKL  152 (155)
T ss_dssp             CC-
T ss_pred             hhh
Confidence            543

>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.5e-26  Score=174.97  Aligned_cols=133  Identities=28%  Similarity=0.557  Sum_probs=114.8

Q ss_pred             eeCCCCcc-CCCeEEe-ccCCcccccEEEEEcCCCCeEeC------CCceEeCCCCeeeCCCCceeccceeeeecccccc
Q psy14531         23 IICPKIVV-ENPYLTL-VEQNNTYRGHAIFQCSWGYQLKG------PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV   94 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~-~~~~~~~g~~~~~~C~~gy~l~G------~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~   94 (222)
                      +.|+.|+. +||.+.. ....|.+|++|+|+|+.||.|.|      +..++|+.+|+|+.+.|.|+.            +
T Consensus         3 ~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~------------~   70 (159)
T 2qy0_A            3 QACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI------------K   70 (159)
T ss_dssp             CBCCCCCCCSTTEEEETCCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEEEE------------C
T ss_pred             ccCcCCCCCCCCcEecCCCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCcccc------------c
Confidence            57999987 9997643 34678999999999999999987      479999999999999999998            8


Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc----CC-----CeEEeCcCCeeeCC-----CCceeecCCCC
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL----GE-----ETIVCTETGRWSRA-----PPRCKARCEYP  160 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~----g~-----~~~~C~~~g~Ws~~-----~p~C~~~C~~p  160 (222)
                      .|+.|+.+.||.+........+.+|++|+|+|+.||.+.    |.     ..++|+++|+|+..     .|.|+..|+.|
T Consensus        71 ~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~~~~~~~~P~C~~~C~~p  150 (159)
T 2qy0_A           71 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKP  150 (159)
T ss_dssp             BCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEBTTTBTSCCCEEECCSCC
T ss_pred             cCCCCCCCCCCeeEeccCCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCCCCCCccCCceeCCCCCC
Confidence            999999999999875433467889999999999999865    53     78999999999997     99999669999


Q ss_pred             CCCCCeE
Q psy14531        161 GEPQNGK  167 (222)
Q Consensus       161 ~~~~~g~  167 (222)
                      ..+.||.
T Consensus       151 ~~p~~g~  157 (159)
T 2qy0_A          151 VNPVEQR  157 (159)
T ss_dssp             SSCSSCC
T ss_pred             CCCcccc
Confidence            9988874

>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1

Probab=99.93  E-value=2e-25  Score=162.88  Aligned_cols=121  Identities=26%  Similarity=0.497  Sum_probs=107.8

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCc
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLK  172 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~  172 (222)
                      +.|+.|+.+.||.+........|.+|++++|+|+.|| |.|...++|+.+|+|+...|.|+ +.|+.|+.+.||.+... 
T Consensus         4 ~~C~~p~~~~ng~~~~~~~~~~~~~g~~~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-   81 (128)
T 1gkn_A            4 AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEY-YGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVI-   81 (128)
T ss_dssp             CEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTE-ESCCEEEEBCSSSCBCCCCSCCEECBCCCCCCCTTEEEEES-
T ss_pred             ccCcCCCCCCCCEEeccCcCCCcCCCCEEEEEcCCCC-cCCCCceEECCCCcCCCCCCeEcceECcCCCCCCCcEEEec-
Confidence            6899999999999874322357999999999999999 99999999999999998899999 69999999999998754 


Q ss_pred             cccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCc---ccCCCCceeeCc
Q psy14531        173 FFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCTNYT  220 (222)
Q Consensus       173 ~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~---W~~~~p~C~~~~  220 (222)
                      ..|..|+.|+|.|++||.+.|+    ..++|+.+|+   |++++|.|+++.
T Consensus        82 ~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~~~~Ws~~~P~C~~i~  128 (128)
T 1gkn_A           82 TDIQVGSRITYSCTTGHRLIGH----SSAECILSGNTAHWSTKPPICQRIP  128 (128)
T ss_dssp             SCCBTTCEEEEEECTTEECCSC----SEEEEEECSSSEEESSCCCCCEECC
T ss_pred             cCCccCCEEEEEeCCCCEEccC----CceEEcCCCCcCCccCCCCEeeECC
Confidence            3567799999999999999988    7899999999   999999999873

>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A

Probab=99.93  E-value=1.9e-25  Score=164.72  Aligned_cols=122  Identities=25%  Similarity=0.567  Sum_probs=110.0

Q ss_pred             eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCe---eeCCCCceeccceeeeecccccc
Q psy14531         19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNAFFFFFFFFFFNPV   94 (222)
Q Consensus        19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~---W~~~~p~C~~~~~~~~~~~~~~~   94 (222)
                      .|+++.|+.|+. +||.+.. ...+.+|+.|+|+|+.||.|.|+..++|+.+|+   |+.+.|.|+.            +
T Consensus         1 ~c~~~~C~~p~~~~nG~~~~-~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~------------~   67 (136)
T 1gkg_A            1 EAEAKSCKTPPDPVNGMVHV-ITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQR------------I   67 (136)
T ss_dssp             CCSCCBCCCCCCCSSCEEEC-CSCSBTTCEEEEECCSSEEECSCSEEEEEECSSSEEESSCCCCEEE------------C
T ss_pred             CcccCCCcCCCCCCCCEEEC-CCCCccCCEEEEECCCCCeEcCCCceEEeCCCccccccCCCCCEEe------------e
Confidence            378889999877 9999874 467899999999999999999999999999999   9999999999            8


Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeCCCCcee
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSRAPPRCK  154 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~~~p~C~  154 (222)
                      .|+.|+.+.||.+... ....|.+|++|+|+|+.|      |.|.|+..++|+.+    |+|++..|.|+
T Consensus        68 ~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~  136 (136)
T 1gkg_A           68 PCGLPPTIANGDFIST-NRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCI  136 (136)
T ss_dssp             CCCCCCCCTTCCBCSS-CSSCCCSSCEEEBCCCCTTSCCSSCCEESCCEEECCCSSSSSCCCSCCCCEEC
T ss_pred             cCCCCCCCCCCeEEcC-CCCccccCCEEEEEeCCCCCccceEEEeCCCeeEECCCCCCCCEECCCCcccC
Confidence            9999999999987632 246789999999999999      89999999999998    99999889984

>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*

Probab=99.92  E-value=1.2e-25  Score=206.81  Aligned_cols=151  Identities=28%  Similarity=0.568  Sum_probs=131.6

Q ss_pred             CceEeccCCccCCC---------CCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCee
Q psy14531          3 HPVFRVSQGQWSGE---------VPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSW   72 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~---------~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W   72 (222)
                      .+++|+.+|.|+..         .|.|+.+.|+.|+. +||.+......|.+|+.++|+|+.||.|.|+..++|+.+|+|
T Consensus        47 ~~~~C~~~g~Ws~~~~~~~~~~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~W  126 (741)
T 3hrz_D           47 QTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRW  126 (741)
T ss_dssp             SEEEBCTTSCBCCEECTTCCEESCCEEEECEECCCSCCTTEEEECCCSSEETTCEEEEEECTTCEEESCSEEEBCTTSCB
T ss_pred             CeEEECCCCcCCCCCcccccCcCCCeEEeeECcCCCCCCCCEEeccCCCcccCCEEEEEECCCCccCCCcceEecCCCeE
Confidence            57899999999984         78999999999987 999998766778999999999999999999999999999999


Q ss_pred             eCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCc
Q psy14531         73 SGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR  152 (222)
Q Consensus        73 ~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~  152 (222)
                      +++.|.|+.          ..+.|+.|..+.++...    ...|.+|++|+|+|+.||.|.|+..++|+.+|+|++..|.
T Consensus       127 s~~~p~C~~----------~~~~C~~p~~~~~~~~~----~~~~~~g~~v~~~C~~gy~l~G~~~~~C~~~g~Ws~~~p~  192 (741)
T 3hrz_D          127 SGQTAICDN----------GAGYCSNPGIPIGTRKV----GSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPS  192 (741)
T ss_dssp             SSCCCEEEC----------SCSSSCCCCCCTTEEEE----CCCCSTTCEEEEEECTTSEEESCSEEEBCTTSSBSSCCCE
T ss_pred             ccCcCeeec----------cCCcCCCCCCCCCCeee----CCccccCCEEEEEcCCCCEEcCCCeEEECCCCEEeCCCcc
Confidence            999999984          11579999888776553    4568999999999999999999999999999999999999


Q ss_pred             eee--cCCCCCCCCCeE
Q psy14531        153 CKA--RCEYPGEPQNGK  167 (222)
Q Consensus       153 C~~--~C~~p~~~~~g~  167 (222)
                      |+.  .|..|..+.++.
T Consensus       193 C~~~~~c~~p~~i~~~~  209 (741)
T 3hrz_D          193 CQDSFMYDTPQEVAEAF  209 (741)
T ss_dssp             EECTTCCBCHHHHHHHH
T ss_pred             ccCCCcCCCCccccccc
Confidence            994  677666555443

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*

Probab=99.92  E-value=2.8e-25  Score=208.02  Aligned_cols=166  Identities=21%  Similarity=0.419  Sum_probs=125.3

Q ss_pred             eCCCCccCCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC----eeeCCCCceeccceeeeecccccccCCCC
Q psy14531         24 ICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG----SWSGAIPECNAFFFFFFFFFFNPVHCPVP   99 (222)
Q Consensus        24 ~C~~p~~~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g----~W~~~~p~C~~~~~~~~~~~~~~~~C~~p   99 (222)
                      .|..|...+|......     .....+.|  ||.|.|...++|+.+|    .|+.+.|.|+.             .|+.|
T Consensus       567 ~C~nP~P~~GG~~C~G-----~~~~~~~C--gy~L~G~~~~~C~~~g~~~~~Ws~~~P~C~~-------------~C~~p  626 (913)
T 3t5o_A          567 ECNNPAPQRGGKRCEG-----EKRQEEDC--TFSIMENNGQPCINDDEEMKEVDLPEIEADS-------------GCPQP  626 (913)
T ss_dssp             CSCSSCCBSSCCCCCS-----CSEEEEEC--C---------CCCCCCCC-----------CC-------------CBCCC
T ss_pred             ccCCCCcccCCcccCC-----CceEEEEC--CCcccccccceEeCCCCccccCCCCCCCCcC-------------cCCCC
Confidence            4998877555443322     23556899  9999999999999987    89999999988             89999


Q ss_pred             CCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEecCccccCCC
Q psy14531        100 ALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIPLKFFYDPG  178 (222)
Q Consensus       100 ~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~~~~~~~g  178 (222)
                      +.+.||.+..  ....|.+|++|+|+|+.||.|.|...++|+++|+|+.+.|.|+ +.|+.|+.+.++.+......|.+|
T Consensus       627 ~~~~nG~~~~--~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~v~C~~P~~~~~~~~~~~~~~y~~g  704 (913)
T 3t5o_A          627 VPPENGFIRN--EKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRLYRIG  704 (913)
T ss_dssp             CCCTTEEESC--CCSCBCTTCEEEEEECTTEEEESCCEEEECTTSCEECCSCEEEECEEECCCCCSSSBCSSCCSEEETT
T ss_pred             CCCCCceEec--CCCceecccEEEEEeCCCCEECCCCceEECCCCeEcCCCCeeccCcCCCCCCCCCcEecCCCCcccCC
Confidence            9999998862  3577899999999999999999999999999999999999999 689999888877766556678889


Q ss_pred             CeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCce
Q psy14531        179 DHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC  216 (222)
Q Consensus       179 ~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C  216 (222)
                      +.|+|.|++||.+.|+    ..++|+.+ +|++++|.+
T Consensus       705 s~v~y~C~~Gy~l~G~----~~~~C~~~-~Ws~~~P~~  737 (913)
T 3t5o_A          705 ESIELTCPKGFVVAGP----SRYTCQGN-SWTPPISNS  737 (913)
T ss_dssp             CEEECBCCTTCEESSC----SEEECBTT-BCSCCCTTS
T ss_pred             CEEEEEeCCCCEECCC----CceEECCC-EeeCCCCee
Confidence            9999999999999988    89999977 999988763

>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C

Probab=99.92  E-value=5.1e-25  Score=161.11  Aligned_cols=119  Identities=25%  Similarity=0.683  Sum_probs=104.1

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCc----CCeeeCCCCcee-----ecCCCCCCCC
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE----TGRWSRAPPRCK-----ARCEYPGEPQ  164 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~----~g~Ws~~~p~C~-----~~C~~p~~~~  164 (222)
                      +.|+.|+.+.||.+..  ....|.+|++++|+|+.||.|.|...++|+.    +|+|+...|.|+     +.|+.| .+.
T Consensus         2 i~C~~p~~~~nG~~~~--~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p-~~~   78 (130)
T 1ly2_A            2 ASCGSPPPILNGRISY--YSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEP-IVP   78 (130)
T ss_dssp             CEECCCCCCTTEEECC--CCSSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEEECCTTCEECCC-CCT
T ss_pred             ccCCCCCCCCCCeEec--CCCcccCCCEEEEEcCCCCEEeCCCeeEEeCCCCCCCeECCCCCeeEcccCccCCcCC-CCC
Confidence            6899999999998763  2467899999999999999999999999986    899999899998     589988 566


Q ss_pred             CeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCC-CCceeeC
Q psy14531        165 NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD-IPHCTNY  219 (222)
Q Consensus       165 ~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~-~p~C~~~  219 (222)
                      +|.+......|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++. +|+|+++
T Consensus        79 ~g~~~~~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~Ws~~~~P~C~~i  130 (130)
T 1ly2_A           79 GGYKIRGSTPYRHGDSVTFACKTNFSMNGN----KSVWCQANNMWGPTRLPTCVSI  130 (130)
T ss_dssp             TEEEEECCSSEETTCEEEEEECTTEEEESC----SEEEECTTSSEESSCCCEEEEC
T ss_pred             CCeEecCcccccCCCEEEEEeCCCCEEeCC----CceEECCCCEECCCCCccceEC
Confidence            777665434677899999999999999988    78999999999997 9999875

>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1

Probab=99.92  E-value=3.2e-25  Score=161.79  Aligned_cols=117  Identities=25%  Similarity=0.507  Sum_probs=106.4

Q ss_pred             EeeCCCCcc-CCCeEEecc--CCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531         22 QIICPKIVV-ENPYLTLVE--QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV   98 (222)
Q Consensus        22 ~~~C~~p~~-~ng~~~~~~--~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~   98 (222)
                      .+.|+.|+. +||.+....  ..|.+|+.|.|+|+.|| |.|+..++|+.+|+|+.+.|.|+.            +.|+.
T Consensus         3 ~~~C~~p~~~~ng~~~~~~~~~~~~~g~~~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~~p~C~~------------~~C~~   69 (128)
T 1gkn_A            3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEY-YGRPFSITCLDNLVWSSPKDVCKR------------KSCKT   69 (128)
T ss_dssp             CCEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTE-ESCCEEEEBCSSSCBCCCCSCCEE------------CBCCC
T ss_pred             CccCcCCCCCCCCEEeccCcCCCcCCCCEEEEEcCCCC-cCCCCceEECCCCcCCCCCCeEcc------------eECcC
Confidence            357999887 999987653  56899999999999999 999999999999999999999999            89999


Q ss_pred             CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCe---eeCCCCcee
Q psy14531         99 PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPRCK  154 (222)
Q Consensus        99 p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~---Ws~~~p~C~  154 (222)
                      |+.+.||.+..   ...|.+|++++|+|+.||.|.|+..++|+.+|+   |++..|.|+
T Consensus        70 p~~~~nG~~~~---~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~  125 (128)
T 1gkn_A           70 PPDPVNGMVHV---ITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQ  125 (128)
T ss_dssp             CCCCTTEEEEE---SSCCBTTCEEEEEECTTEECCSCSEEEEEECSSSEEESSCCCCCE
T ss_pred             CCCCCCcEEEe---ccCCccCCEEEEEeCCCCEEccCCceEEcCCCCcCCccCCCCEee
Confidence            99999999864   256889999999999999999999999999999   999899997

>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A

Probab=99.92  E-value=6.5e-26  Score=175.93  Aligned_cols=131  Identities=27%  Similarity=0.516  Sum_probs=113.8

Q ss_pred             CceEeccCCccCCCCCeeEEeeCCCCccCCCeEEeccCCcccccEEEEEcCCCCeEe-CCCceEeCCCCeeeCCCCceec
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLK-GPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~~C~~p~~~ng~~~~~~~~~~~g~~~~~~C~~gy~l~-G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      ..++|+.+| |+...| |++ .|+.|.++||.+......|.+|+.|+|+|+.||.|. |...++|+.+| |+. .|.|+.
T Consensus        51 ~~~~C~~~g-Ws~~~~-C~~-~C~~p~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~G~~~~~C~~~g-Ws~-~P~C~~  125 (187)
T 2uwn_A           51 DHIHCTQDG-WSPAVP-CLR-KCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP-TPRCIR  125 (187)
T ss_dssp             EEEEEETTE-EESSSC-CEE-EEECCCCTTEECSCTTCEEETTCEEECEECTTEECSSSCSEEEEETTE-EES-CSCCEE
T ss_pred             CEEEeCCCC-CCCCCC-cCC-cCcCCCCCccEEcCCCccccCCCEEEEEcCCCCCccCCCeEEEecCCC-cCC-CCceee
Confidence            378999999 998766 988 899876699988655566889999999999999996 99999999999 997 699998


Q ss_pred             cceeeeecccccc-cCCC-CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCC---CeEEeCcCCeeeCCCCcee
Q psy14531         82 FFFFFFFFFFNPV-HCPV-PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGE---ETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        82 ~~~~~~~~~~~~~-~C~~-p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~---~~~~C~~~g~Ws~~~p~C~  154 (222)
                                  + .|+. |+.+.||.+..  ....|.+|++|+|+|+.||.|.|.   ..++|+++| |++ .|.|.
T Consensus       126 ------------v~~C~~~p~~~~nG~~~~--~~~~y~~g~~v~~~C~~Gy~l~g~~~s~~~~C~~~g-Ws~-~P~Ci  187 (187)
T 2uwn_A          126 ------------VKTCSKSSIDIENGFISE--SQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDG-WSA-QPTCI  187 (187)
T ss_dssp             ------------CCEEEGGGCCCSSEECCS--CCSEEETTCEEEEEECTTCCCSSSCSEEEEEEETTE-ESC-CCCCC
T ss_pred             ------------cccCCCCCccccCceEcC--CCccCcCCCEEEEECCCCCEecCCCCcCeEEECCCC-cCC-CCccC
Confidence                        7 8998 58888998742  246688899999999999999985   789999999 999 88884

>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A

Probab=99.92  E-value=1.8e-24  Score=157.22  Aligned_cols=117  Identities=30%  Similarity=0.639  Sum_probs=105.1

Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee-ecCCCCCCCCCeEEec
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK-ARCEYPGEPQNGKIIP  170 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~-~~C~~p~~~~~g~~~~  170 (222)
                      .|+.|+.+.||.+...   ..+.+|++++|+|+.||.|.|...++|+.+|   +|+...|.|+ +.|+.|+.+.||.+..
T Consensus         2 ~C~~p~~~~nG~~~~~---~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~   78 (125)
T 1h03_P            2 SCPNPGEIRNGQIDVP---GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQG   78 (125)
T ss_dssp             BCCCCCCCTTEEEECT---TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEETT
T ss_pred             cCcCCCCCCCCEEECC---CCcCcCCEEEEECCCCCeECCCCeeEEcCCCCCCEeCCCCCcCCCCcCCCCCCCCCCEEeC
Confidence            5999999999998742   4678899999999999999999999999888   9999899999 6999999999999887


Q ss_pred             CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCC---CCcccCCCCceee
Q psy14531        171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS---DGTWSLDIPHCTN  218 (222)
Q Consensus       171 ~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~---~G~W~~~~p~C~~  218 (222)
                      ....|.+|+.|+|.|++||.+.|+    ..++|+.   +|+|++++|.|++
T Consensus        79 ~~~~~~~g~~v~~~C~~Gy~l~G~----~~~~C~~~~~~G~Ws~~~P~C~~  125 (125)
T 1h03_P           79 ERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECRG  125 (125)
T ss_dssp             CCSCCBTTCEEEEEECTTCEEESC----SEEEEEEETTEEEESSCCCEEEC
T ss_pred             CcCceecCCEEEEEECCCCEECCC----CeeEEecCCCCCEECCCCceecC
Confidence            656678899999999999999988    7899984   6999999999975

>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A

Probab=99.92  E-value=1.3e-24  Score=157.96  Aligned_cols=117  Identities=31%  Similarity=0.693  Sum_probs=105.0

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCceeccceeeeecccccccCCC
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPECNAFFFFFFFFFFNPVHCPV   98 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~C~~~~~~~~~~~~~~~~C~~   98 (222)
                      +.|+.|+. +||.+... ..+.+|+.|+|+|+.||.|.|+..++|+.+|   +|+.+.|.|+.            +.|+.
T Consensus         1 k~C~~p~~~~nG~~~~~-~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~------------~~C~~   67 (125)
T 1h03_P            1 KSCPNPGEIRNGQIDVP-GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE------------IYCPA   67 (125)
T ss_dssp             CBCCCCCCCTTEEEECT-TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEE------------CBCCC
T ss_pred             CcCcCCCCCCCCEEECC-CCcCcCCEEEEECCCCCeECCCCeeEEcCCCCCCEeCCCCCcCCC------------CcCCC
Confidence            36998877 99999864 5688999999999999999999999999888   99999999999            89999


Q ss_pred             CCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCc---CCeeeCCCCcee
Q psy14531         99 PALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTE---TGRWSRAPPRCK  154 (222)
Q Consensus        99 p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~---~g~Ws~~~p~C~  154 (222)
                      |+.+.||.+..  ....|.+|++|+|+|+.||.|.|+..++|+.   +|+|+...|.|+
T Consensus        68 p~~~~nG~~~~--~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~~~~G~Ws~~~P~C~  124 (125)
T 1h03_P           68 PPQIDNGIIQG--ERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECR  124 (125)
T ss_dssp             CCCCTTEEETT--CCSCCBTTCEEEEEECTTCEEESCSEEEEEEETTEEEESSCCCEEE
T ss_pred             CCCCCCCEEeC--CcCceecCCEEEEEECCCCEECCCCeeEEecCCCCCEECCCCceec
Confidence            99999998753  2457889999999999999999999999985   699999899996

>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A

Probab=99.91  E-value=2e-24  Score=159.22  Aligned_cols=117  Identities=30%  Similarity=0.671  Sum_probs=105.7

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCe---eeCCCCcee-ecCCCCCCCCCeEEe
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPRCK-ARCEYPGEPQNGKII  169 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~---Ws~~~p~C~-~~C~~p~~~~~g~~~  169 (222)
                      +.|+.|+.+.||.+..   ...|.+|++++|+|+.||.|.|...++|+.+|+   |+...|.|+ +.|+.|+.+.||.+.
T Consensus         5 ~~C~~p~~~~nG~~~~---~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~   81 (136)
T 1gkg_A            5 KSCKTPPDPVNGMVHV---ITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFI   81 (136)
T ss_dssp             CBCCCCCCCSSCEEEC---CSCSBTTCEEEEECCSSEEECSCSEEEEEECSSSEEESSCCCCEEECCCCCCCCCTTCCBC
T ss_pred             CCCcCCCCCCCCEEEC---CCCCccCCEEEEECCCCCeEcCCCceEEeCCCccccccCCCCCEEeecCCCCCCCCCCeEE
Confidence            8999999999999863   466889999999999999999999999999999   999899999 689999999999887


Q ss_pred             cC-ccccCCCCeEEEEcCCC------CeeccCCCCCCcceeCCC----CcccCCCCcee
Q psy14531        170 PL-KFFYDPGDHIQVTCNDG------YVKPLDITPTSGPYCQSD----GTWSLDIPHCT  217 (222)
Q Consensus       170 ~~-~~~~~~g~~v~y~C~~g------y~~~~~~~~~~~~~C~~~----G~W~~~~p~C~  217 (222)
                      .. ...|.+|+.|+|.|++|      |.+.|+    ..++|+.+    |+|++++|.|+
T Consensus        82 ~~~~~~~~~g~~v~y~C~~Gy~~~~~y~l~G~----~~~~C~~~~~~~G~Ws~~~P~C~  136 (136)
T 1gkg_A           82 STNRENFHYGSVVTYRCNLGSRGRKVFELVGE----PSIYCTSNDDQVGIWSGPAPQCI  136 (136)
T ss_dssp             SSCSSCCCSSCEEEBCCCCTTSCCSSCCEESC----CEEECCCSSSSSCCCSCCCCEEC
T ss_pred             cCCCCccccCCEEEEEeCCCCCccceEEEeCC----CeeEECCCCCCCCEECCCCcccC
Confidence            53 35678899999999999      888888    79999988    99999999995

>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C

Probab=99.91  E-value=1.8e-24  Score=158.12  Aligned_cols=122  Identities=24%  Similarity=0.548  Sum_probs=103.5

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCC----CCeeeCCCCceeccceeeeecccccccCC
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQK----NGSWSGAIPECNAFFFFFFFFFFNPVHCP   97 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~----~g~W~~~~p~C~~~~~~~~~~~~~~~~C~   97 (222)
                      +.|+.|+. +||.+......|.+|++|+|+|+.||.|.|+..++|+.    +|+|+.+.|.|+..        ...+.|+
T Consensus         2 i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~--------~~~~~C~   73 (130)
T 1ly2_A            2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYF--------NKYSSCP   73 (130)
T ss_dssp             CEECCCCCCTTEEECCCCSSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEEEC--------CTTCEEC
T ss_pred             ccCCCCCCCCCCeEecCCCcccCCCEEEEEcCCCCEEeCCCeeEEeCCCCCCCeECCCCCeeEcc--------cCccCCc
Confidence            67998887 99998765577899999999999999999999999986    89999999999840        0014899


Q ss_pred             CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCC-CCceee
Q psy14531         98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRA-PPRCKA  155 (222)
Q Consensus        98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~-~p~C~~  155 (222)
                      .|. +.++.+...  ...|.+|++|+|+|+.||.|.|+..++|+++|+|++. .|.|+.
T Consensus        74 ~p~-~~~g~~~~~--~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~~P~C~~  129 (130)
T 1ly2_A           74 EPI-VPGGYKIRG--STPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVS  129 (130)
T ss_dssp             CCC-CTTEEEEEC--CSSEETTCEEEEEECTTEEEESCSEEEECTTSSEESSCCCEEEE
T ss_pred             CCC-CCCCeEecC--cccccCCCEEEEEeCCCCEEeCCCceEECCCCEECCCCCccceE
Confidence            885 457776542  3478999999999999999999999999999999997 899973

>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A

Probab=99.91  E-value=3.3e-24  Score=161.46  Aligned_cols=121  Identities=24%  Similarity=0.517  Sum_probs=106.1

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCC------eEEeCcCCeeeCCCCcee-ecCCCCCCCCCe
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRWSRAPPRCK-ARCEYPGEPQNG  166 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~------~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g  166 (222)
                      +.|+.|+.+.||.+...  ...|.+|++|+|+|+.||.|.|..      .++|+.+|+|+...|.|+ +.|..|+.+.||
T Consensus         6 i~C~~p~~~~nG~~~~~--~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG   83 (155)
T 3gov_A            6 NECPELQPPVHGKIEPS--QAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHG   83 (155)
T ss_dssp             CEECCCCCCTTEEEESC--CSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTE
T ss_pred             eeCCCCCCCCCCEEecC--CCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeeeEccCCCCCCCcCc
Confidence            89999999999998742  467899999999999999999876      899999999999899999 799999999999


Q ss_pred             EEec--CccccCCCCeEEEEcCCCC-eec--cCCCCCCcceeCCCCcccC-----CCCceeeCc
Q psy14531        167 KIIP--LKFFYDPGDHIQVTCNDGY-VKP--LDITPTSGPYCQSDGTWSL-----DIPHCTNYT  220 (222)
Q Consensus       167 ~~~~--~~~~~~~g~~v~y~C~~gy-~~~--~~~~~~~~~~C~~~G~W~~-----~~p~C~~~~  220 (222)
                      .+..  ....|.+|+.|+|.|++|| .+.  |+    ..++|+.+|+|++     .+|.|++++
T Consensus        84 ~~~~~~~~~~~~~g~~v~y~C~~Gy~~l~~~G~----~~~~C~~~G~Ws~~~~~~~~P~C~~vC  143 (155)
T 3gov_A           84 LITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNT----GIYTCSAQGVWMNKVLGRSLPTCLPVC  143 (155)
T ss_dssp             EEEESSTTCCCBTTCEEEEEECTTTEEECTTCC----CEEEECTTSCEEBTTTBTSCCCEEECC
T ss_pred             eEEecCCCCccccCCEEEEEeCCChhhhccCCC----ceEEECCCCeECCCcCCCCCCcCCCcc
Confidence            9873  2456778999999999998 666  55    7899999999998     799999874

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*

Probab=99.91  E-value=3.2e-25  Score=207.64  Aligned_cols=191  Identities=17%  Similarity=0.265  Sum_probs=139.6

Q ss_pred             CceEeccCC----ccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCC
Q psy14531          3 HPVFRVSQG----QWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIP   77 (222)
Q Consensus         3 ~~~~c~~~g----~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p   77 (222)
                      ..++|..+|    .|+...|.|+. .|+.|+. +||.+......|.+|+.|+|+|+.||.|.|...++|+.+|+|+.+.|
T Consensus       598 ~~~~C~~~g~~~~~Ws~~~P~C~~-~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P  676 (913)
T 3t5o_A          598 NGQPCINDDEEMKEVDLPEIEADS-GCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDV  676 (913)
T ss_dssp             ---CCCCCCCC-----------CC-CBCCCCCCTTEEESCCCSCBCTTCEEEEEECTTEEEESCCEEEECTTSCEECCSC
T ss_pred             ccceEeCCCCccccCCCCCCCCcC-cCCCCCCCCCceEecCCCceecccEEEEEeCCCCEECCCCceEECCCCeEcCCCC
Confidence            458899987    89999999998 8999887 99999866667899999999999999999999999999999999999


Q ss_pred             ceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecC
Q psy14531         78 ECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARC  157 (222)
Q Consensus        78 ~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C  157 (222)
                      .|+.            +.|+.|+.+.++.+.  .....|.+|++|+|+|+.||.|.|+..++|+++ +|+++.|.+ +.|
T Consensus       677 ~C~~------------v~C~~P~~~~~~~~~--~~~~~y~~gs~v~y~C~~Gy~l~G~~~~~C~~~-~Ws~~~P~~-i~C  740 (913)
T 3t5o_A          677 ECQR------------TECIKPVVQEVLTIT--PFQRLYRIGESIELTCPKGFVVAGPSRYTCQGN-SWTPPISNS-LTC  740 (913)
T ss_dssp             EEEE------------CEEECCCCCSSSBCS--SCCSEEETTCEEECBCCTTCEESSCSEEECBTT-BCSCCCTTS-CCE
T ss_pred             eecc------------CcCCCCCCCCCcEec--CCCCcccCCCEEEEEeCCCCEECCCCceEECCC-EeeCCCCee-eEC
Confidence            9999            899999988776552  335678899999999999999999999999988 999988764 678


Q ss_pred             CCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCc--ccCCCCce
Q psy14531        158 EYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT--WSLDIPHC  216 (222)
Q Consensus       158 ~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~--W~~~~p~C  216 (222)
                      ..++.+..+ ..........+..  ..|+.+|++-+..   ...+|..+|.  |...++.|
T Consensus       741 ~~~~~~~~~-~~C~~g~~~~~s~--C~C~~p~~~c~~~---~~~~C~~~~~~~~~~~~~~C  795 (913)
T 3t5o_A          741 EKDTLTKLK-GHCQLGQKQSGSE--CICMSPEEDCSHH---SEDLCVFDTDSNDYFTSPAC  795 (913)
T ss_dssp             ECCC------CTTTTTEECSTTS--CEECCHHHHCCSC---CSEEEEEETTTTEEEEEEHH
T ss_pred             cCCCCCCCC-CCCCCCcccCCCc--eEECChhhcCCCC---CCCeeccCCCCceeecccHH
Confidence            766444333 1221111122333  4899999865542   4679987765  66555666

>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}

Probab=99.90  E-value=1.3e-24  Score=159.59  Aligned_cols=121  Identities=22%  Similarity=0.507  Sum_probs=106.1

Q ss_pred             ccCCCCCCCCCceEEeC-CCCCCcCCCCEEEEEcCCCC-EEcCCCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCeEEec
Q psy14531         94 VHCPVPALPLNGHLIED-PTGGPYRVGAILQFACNDRH-HLLGEETIVCTETGRWSRAPPRCK-ARCEYPGEPQNGKIIP  170 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~-~~~~~~~~g~~~~~~C~~gy-~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g~~~~  170 (222)
                      |.|+.|+.+.||.+... .....|.+|++|+|+|+.|| .+.|+..++|+.+|+|+. .|.|+ +.|+.|+.+.||.+..
T Consensus         1 v~C~~Pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~~l~G~~~~~C~~~G~Ws~-~p~C~~~~C~~p~~~~nG~~~~   79 (133)
T 2a55_A            1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NTFCIYKRCRHPGELRNGQVEI   79 (133)
T ss_dssp             CCCCSCCCCTTCBCCSSCTTCSCCCTTCCCCCBCCTTEESCCSCCCCEECSSSSEEC-CCCSEECBCCCCCCCTTBCCCC
T ss_pred             CcCCCCCCCCcceEccccccCCccCCCCEEEEEeCCCCcccCCCCEEEECCCCeECC-CCcCccCCCcCCCccCCceEEc
Confidence            47999999999987642 12467899999999999999 788999999999999999 99999 7999999999998775


Q ss_pred             CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeCc
Q psy14531        171 LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNYT  220 (222)
Q Consensus       171 ~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~~  220 (222)
                      . ..|..|+.|+|.|++||.+.|+    ..++|+.+|   +|++++|.|....
T Consensus        80 ~-~~~~~g~~v~~~C~~Gy~L~G~----~~~~C~~~G~~~~Ws~~~p~C~~~~  127 (133)
T 2a55_A           80 K-TDLSFGSQIEFSCSEGFFLIGS----TTSRCEVQDRGVGWSHPLPQCEILE  127 (133)
T ss_dssp             C-STTBSSCBCCCCBCTTCBCCSC----SCCBCCCCSSSCCCSCCCCCCBCCS
T ss_pred             C-CCCcCCCEEEEEcCCCCEEcCC----CeeEecCCCCCCEeCCCCccccccc
Confidence            3 3567799999999999999988    789999999   8999999998753

>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}

Probab=99.90  E-value=3.5e-23  Score=156.50  Aligned_cols=126  Identities=26%  Similarity=0.475  Sum_probs=105.3

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcC------CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCe
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG------EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNG  166 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g------~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g  166 (222)
                      +.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|      ...++|+.+|+|+...|.|+ +.|+.|+.+.||
T Consensus         3 ~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG   81 (159)
T 2qy0_A            3 QACPQPKTLDEFTIIQN-LQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNG   81 (159)
T ss_dssp             CBCCCCCCCSTTEEEET-CCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEEEECBCCSCCCCTTE
T ss_pred             ccCcCCCCCCCCcEecC-CCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCccccccCCCCCCCCCC
Confidence            68999999999976542 35678999999999999999997      47899999999999899999 799999999999


Q ss_pred             EEecC--ccccCCCCeEEEEcCCCCeeccC--CCC---CCcceeCCCCcccCC-----CCceeeCc
Q psy14531        167 KIIPL--KFFYDPGDHIQVTCNDGYVKPLD--ITP---TSGPYCQSDGTWSLD-----IPHCTNYT  220 (222)
Q Consensus       167 ~~~~~--~~~~~~g~~v~y~C~~gy~~~~~--~~~---~~~~~C~~~G~W~~~-----~p~C~~~~  220 (222)
                      .+...  ...|..|+.|+|.|++||++...  +..   ...++|+.+|+|+++     +|.|++++
T Consensus        82 ~~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~~~~~~~~P~C~~~C  147 (159)
T 2qy0_A           82 DFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVC  147 (159)
T ss_dssp             EEEESSSTTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEBTTTBTSCCCEEECC
T ss_pred             eeEeccCCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCCCCCCccCCceeCCC
Confidence            98753  34567799999999999986521  100   157999999999998     99999874

>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}

Probab=99.90  E-value=3.5e-23  Score=176.57  Aligned_cols=133  Identities=23%  Similarity=0.506  Sum_probs=113.5

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeC----CCCeeeCCCCceeccceeeeecccccccCC
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ----KNGSWSGAIPECNAFFFFFFFFFFNPVHCP   97 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~----~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~   97 (222)
                      +.|+.|+. +||.+......|.+|+.|+|+|+.||.|.|...++|+    .+|+|+++.|.|+..        ...+.|+
T Consensus         2 i~C~~p~~~~nG~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~--------~~~~~C~   73 (376)
T 2aty_A            2 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYF--------NKYSSCP   73 (376)
T ss_pred             CCCcCCCCCCCCEEeccCCcccCCCEEEEEeCCCCEEcCCCceEEeccCCCCCeECCCCCccccc--------cCccEeC
Confidence            57999887 9999987667799999999999999999999999999    799999999999850        0013799


Q ss_pred             CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeC-CCCceeecCCCCCCCCCe
Q psy14531         98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSR-APPRCKARCEYPGEPQNG  166 (222)
Q Consensus        98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~-~~p~C~~~C~~p~~~~~g  166 (222)
                      .|..+.++.+.   ....|.+|++|+|.|+.||.|.|...++|+++|+|++ ..|.|+..|..|+.+.|+
T Consensus        74 ~p~~~~~~~~~---~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~~~~~~~~~~~  140 (376)
T 2aty_A           74 EPIVPGGYKIR---GSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGR  140 (376)
T ss_pred             CCcCCCCeEec---CCCCccCCCEEEEECCCCCEECCCcCeEECCCCEECCCCCCEeEccCCCcccccCC
Confidence            98877565543   2467889999999999999999999999999999998 799999878877777764

>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}

Probab=99.90  E-value=9e-24  Score=163.95  Aligned_cols=133  Identities=26%  Similarity=0.509  Sum_probs=109.6

Q ss_pred             CceEeccCCccCCCCCeeEEe--eCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCc
Q psy14531          3 HPVFRVSQGQWSGEVPTCQQI--ICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPE   78 (222)
Q Consensus         3 ~~~~c~~~g~Ws~~~p~C~~~--~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~   78 (222)
                      ..++|+ +|+|+. .|.|+.+  .|+.|+. +||.+... ...|.+|+.|+|+|+.||.|.|+..++|+ +|+|+. .|.
T Consensus        44 ~~~~C~-~g~Ws~-~p~C~~~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~  119 (188)
T 3sw0_X           44 EEVMCL-NGNWTE-PPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSE-PPK  119 (188)
T ss_dssp             SEEEEE-TTEECC-CCEEECTTCCBCSCCCCTTEEESSCCCSCBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCE
T ss_pred             CEEEeC-CCEeCC-CCccCcCCCcCCCCCccCCCeEecCCCCcccCCCEEEEEcCCCCEECCCCeEEcC-CCccCC-CCc
Confidence            468899 999996 5999987  8998777 99988753 35678899999999999999999999999 999997 599


Q ss_pred             eeccceeeeecccccccCCCCCCCCCc---eEEeCCCCCCc-CCCCEEEEEcCCCCEEcCCC---eEEeCcCCeeeCCCC
Q psy14531         79 CNAFFFFFFFFFFNPVHCPVPALPLNG---HLIEDPTGGPY-RVGAILQFACNDRHHLLGEE---TIVCTETGRWSRAPP  151 (222)
Q Consensus        79 C~~~~~~~~~~~~~~~~C~~p~~~~~g---~~~~~~~~~~~-~~g~~~~~~C~~gy~~~g~~---~~~C~~~g~Ws~~~p  151 (222)
                      |+.             .|+.|..+.++   .+........| .+|++|+|+|+.||.|.|+.   .++|+ +|+|  ..|
T Consensus       120 C~~-------------~C~~p~~~~~~~~~~~~~~~~~~~y~~~g~~v~~~C~~Gy~l~G~~~~~~~~C~-~g~w--~~P  183 (188)
T 3sw0_X          120 CLH-------------PCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCW-DGKL--EYP  183 (188)
T ss_dssp             EEC-------------CEECCHHHHHHHTEEESCCSSCCCEECTTCEEEEEECTTCEECTTCCCSEEECB-TTBC--CCC
T ss_pred             ccc-------------cCCCChHHhccCceeeeccccccccccCCCEEEEECCCCceeCCCCCCeEeEcC-CCcE--eCC
Confidence            988             79988766543   22211223444 78999999999999999988   89998 8999  478


Q ss_pred             ceee
Q psy14531        152 RCKA  155 (222)
Q Consensus       152 ~C~~  155 (222)
                      .|+.
T Consensus       184 ~C~~  187 (188)
T 3sw0_X          184 TCAK  187 (188)
T ss_dssp             CEEC
T ss_pred             ceec
Confidence            8863

>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}

Probab=99.90  E-value=1.1e-24  Score=160.06  Aligned_cols=116  Identities=21%  Similarity=0.432  Sum_probs=104.2

Q ss_pred             eeCCCCcc-CCCeEEec---cCCcccccEEEEEcCCCC-eEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCC
Q psy14531         23 IICPKIVV-ENPYLTLV---EQNNTYRGHAIFQCSWGY-QLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCP   97 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~---~~~~~~g~~~~~~C~~gy-~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~   97 (222)
                      +.|+.|+. +||.+...   ...|.+|++|+|+|+.|| .|.|+..++|+.+|+|+. .|.|+.            +.|+
T Consensus         1 v~C~~Pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~~l~G~~~~~C~~~G~Ws~-~p~C~~------------~~C~   67 (133)
T 2a55_A            1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NTFCIY------------KRCR   67 (133)
T ss_dssp             CCCCSCCCCTTCBCCSSCTTCSCCCTTCCCCCBCCTTEESCCSCCCCEECSSSSEEC-CCCSEE------------CBCC
T ss_pred             CcCCCCCCCCcceEccccccCCccCCCCEEEEEeCCCCcccCCCCEEEECCCCeECC-CCcCcc------------CCCc
Confidence            46999888 99998753   356889999999999999 788999999999999998 999998            8999


Q ss_pred             CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCC---eeeCCCCcee
Q psy14531         98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPRCK  154 (222)
Q Consensus        98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g---~Ws~~~p~C~  154 (222)
                      .|+.+.||.+..   ...|.+|++++|+|+.||.|.|+..++|+.+|   +|++..|.|+
T Consensus        68 ~p~~~~nG~~~~---~~~~~~g~~v~~~C~~Gy~L~G~~~~~C~~~G~~~~Ws~~~p~C~  124 (133)
T 2a55_A           68 HPGELRNGQVEI---KTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCE  124 (133)
T ss_dssp             CCCCCTTBCCCC---CSTTBSSCBCCCCBCTTCBCCSCSCCBCCCCSSSCCCSCCCCCCB
T ss_pred             CCCccCCceEEc---CCCCcCCCEEEEEcCCCCEEcCCCeeEecCCCCCCEeCCCCcccc
Confidence            999999998753   35688999999999999999999999999999   9999999886

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=99.88  E-value=1.6e-22  Score=174.06  Aligned_cols=141  Identities=25%  Similarity=0.498  Sum_probs=114.3

Q ss_pred             cCCccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeE------eCCCceEeCCCCeeeCCCCceec
Q psy14531          9 SQGQWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQL------KGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus         9 ~~g~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l------~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      ++.+|+.. +.|+++.|+.|.. .||.+......|.+|++|+|+|++||.|      .|+..++|+.+|+|+.+.|.|+.
T Consensus         2 ~~~gw~~~-~~c~~~~C~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~g~Ws~~~p~C~~   80 (403)
T 1zjk_A            2 SMTGWKIH-YTSTAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACSI   80 (403)
T ss_dssp             ------------CCCCBCCCCCCTTEEESSCCSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSSSSBSSCCCEEEE
T ss_pred             CCCceEEE-EEECCccCcCCCCCCCceEcccCCccccCCEEEEEeCCCCEEccCCCcCCceeeEcCCCCEeCCCCCCccc
Confidence            45679965 5899999999988 9999987767899999999999999999      46678999999999999999999


Q ss_pred             cceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEcCC-CeEEeCcCCeeeC-----CCCcee
Q psy14531         82 FFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLLGE-ETIVCTETGRWSR-----APPRCK  154 (222)
Q Consensus        82 ~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~g~-~~~~C~~~g~Ws~-----~~p~C~  154 (222)
                                  +.|+.|+.+.||.+........+.+|++++|+|+.|| .+.+. ..++|..+|+|+.     ..|.|+
T Consensus        81 ------------~~C~~p~~~~ng~~~~~~~~~~~~~g~~v~~~C~~gyy~l~~~~~~~~C~~~g~W~~~~~~~~~p~C~  148 (403)
T 1zjk_A           81 ------------VDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCE  148 (403)
T ss_dssp             ------------CBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEESSCSEEEECTTSCEEETTCCCSCCEEE
T ss_pred             ------------ccCCCCCCcCCccEEEccCCCCCccCCeEEEeCCCchhheecCCCCEEECCCcccccccCCccCCCCC
Confidence                        8999999999998875444566888999999999996 66666 7899999999986     478999


Q ss_pred             ecCCCCCC
Q psy14531        155 ARCEYPGE  162 (222)
Q Consensus       155 ~~C~~p~~  162 (222)
                      ..|+.+..
T Consensus       149 ~~CG~~~~  156 (403)
T 1zjk_A          149 PVCGLSAR  156 (403)
T ss_dssp             ECCCCCSS
T ss_pred             CCCCCCCC
Confidence            99998754

>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C

Probab=99.88  E-value=4e-23  Score=150.86  Aligned_cols=120  Identities=24%  Similarity=0.523  Sum_probs=98.5

Q ss_pred             cccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeecCCCCCCCCCeE-Ee--
Q psy14531         93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKARCEYPGEPQNGK-II--  169 (222)
Q Consensus        93 ~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g~-~~--  169 (222)
                      .+.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|...++|+ +|+|+ ..|.|+..|..|..+.||. +.  
T Consensus         4 ~~~C~~p~~~~nG~~~~~-~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~~p~C~~~C~~p~~~~~g~~i~~~   80 (129)
T 3r62_A            4 FGKCGPPPPIDNGDITSF-PLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWS-EPPKCLHPCVISREIMENYNIALR   80 (129)
T ss_dssp             -CCBCSCCCBTTEEESSC-CCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEEC-CCCEEECCEECCHHHHHHHTEEET
T ss_pred             cccCcCCCCCCCCEEecC-CCCcCCCCCEEEEECCCCCEeCCCCeeEcC-CCcCC-CCCCccCcCCCChhhhcccceeee
Confidence            478999999999988642 356789999999999999999999999999 99999 6899999999987677762 32  


Q ss_pred             --cCcccc-CCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        170 --PLKFFY-DPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       170 --~~~~~~-~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                        .....| .+|+.|+|.|++||.+.|+... ..++|+ +|+|  .+|+|+..
T Consensus        81 ~~~~~~~y~~~g~~v~f~C~~Gy~l~G~~~~-~~~~C~-~G~W--~~P~C~~k  129 (129)
T 3r62_A           81 WRAKQKLYSRTGESVEFVCKRGYRLSSRSHT-LRTTCW-DGKL--EYPTCAKR  129 (129)
T ss_dssp             TTTTCCSEECTTCEEEEEECTTEEECTTSCC-SEEECB-TTBC--CCCCEEEC
T ss_pred             ecccccccccCCCEEEEEeCCCccccCCCCc-ceEEeC-CCcC--CCceeeeC
Confidence              223344 6899999999999999987211 289998 8999  58999863

>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C

Probab=99.86  E-value=3.6e-22  Score=145.78  Aligned_cols=117  Identities=24%  Similarity=0.437  Sum_probs=96.9

Q ss_pred             EEeeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531         21 QQIICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV   98 (222)
Q Consensus        21 ~~~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~   98 (222)
                      +.+.|+.|+. +||.+... ...|.+|+.|+|+|+.||.|.|...++|+ +|+|+ +.|.|+.             .|+.
T Consensus         3 ~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~~p~C~~-------------~C~~   67 (129)
T 3r62_A            3 EFGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWS-EPPKCLH-------------PCVI   67 (129)
T ss_dssp             --CCBCSCCCBTTEEESSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEEC-CCCEEEC-------------CEEC
T ss_pred             ccccCcCCCCCCCCEEecCCCCcCCCCCEEEEECCCCCEeCCCCeeEcC-CCcCC-CCCCccC-------------cCCC
Confidence            3568999887 99998753 35788999999999999999999999999 99999 7899988             7998


Q ss_pred             CCCCCCce-EEe--CCCCCCc-CCCCEEEEEcCCCCEEcCCC---eEEeCcCCeeeCCCCceee
Q psy14531         99 PALPLNGH-LIE--DPTGGPY-RVGAILQFACNDRHHLLGEE---TIVCTETGRWSRAPPRCKA  155 (222)
Q Consensus        99 p~~~~~g~-~~~--~~~~~~~-~~g~~~~~~C~~gy~~~g~~---~~~C~~~g~Ws~~~p~C~~  155 (222)
                      |+.+.||. +..  ......| .+|++|+|.|+.||.|.|+.   .++|+ +|+|  ..|.|+.
T Consensus        68 p~~~~~g~~i~~~~~~~~~~y~~~g~~v~f~C~~Gy~l~G~~~~~~~~C~-~G~W--~~P~C~~  128 (129)
T 3r62_A           68 SREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCW-DGKL--EYPTCAK  128 (129)
T ss_dssp             CHHHHHHHTEEETTTTTCCSEECTTCEEEEEECTTEEECTTSCCSEEECB-TTBC--CCCCEEE
T ss_pred             ChhhhcccceeeeecccccccccCCCEEEEEeCCCccccCCCCcceEEeC-CCcC--CCceeee
Confidence            87777772 321  1224455 68999999999999999998   99999 8999  4889974

>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}

Probab=99.86  E-value=2.7e-21  Score=164.87  Aligned_cols=120  Identities=26%  Similarity=0.669  Sum_probs=104.9

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeC----cCCeeeCCCCceee-----cCCCCCCCC
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT----ETGRWSRAPPRCKA-----RCEYPGEPQ  164 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~----~~g~Ws~~~p~C~~-----~C~~p~~~~  164 (222)
                      +.|+.|+.+.||.+...  ...|.+|++|+|+|+.||.|.|...++|+    .+|+|++..|.|+.     .|+.|..+.
T Consensus         2 i~C~~p~~~~nG~~~~~--~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p~~~~   79 (376)
T 2aty_A            2 ISCGSPPPILNGRISYY--STPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPG   79 (376)
T ss_pred             CCCcCCCCCCCCEEecc--CCcccCCCEEEEEeCCCCEEcCCCceEEeccCCCCCeECCCCCccccccCccEeCCCcCCC
Confidence            68999999999998742  46789999999999999999999999999    79999998999984     799987666


Q ss_pred             CeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccC-CCCceeeCc
Q psy14531        165 NGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL-DIPHCTNYT  220 (222)
Q Consensus       165 ~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~-~~p~C~~~~  220 (222)
                      ++.+.. ...|.+|+.|+|.|++||.+.|+    ..++|+.+|+|++ ++|+|++++
T Consensus        80 ~~~~~~-~~~~~~g~~~~~~C~~gy~l~G~----~~~~C~~~g~Ws~~~~p~C~~~~  131 (376)
T 2aty_A           80 GYKIRG-STPYRHGDSVTFACKTNFSMNGN----KSVWCQANNMWGPTRLPTCVSVF  131 (376)
T ss_pred             CeEecC-CCCccCCCEEEEECCCCCEECCC----cCeEECCCCEECCCCCCEeEccC
Confidence            665544 34677899999999999999988    7899999999998 799999865

>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}

Probab=99.85  E-value=1.1e-22  Score=147.58  Aligned_cols=114  Identities=23%  Similarity=0.535  Sum_probs=95.4

Q ss_pred             ccCCCCCCCCCceEEeCC-CCCCc--CCCCEEEEEcCCCCEEcCC---CeEEeCcCCeeeCCCCceeecCCCCCCCCCeE
Q psy14531         94 VHCPVPALPLNGHLIEDP-TGGPY--RVGAILQFACNDRHHLLGE---ETIVCTETGRWSRAPPRCKARCEYPGEPQNGK  167 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~-~~~~~--~~g~~~~~~C~~gy~~~g~---~~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g~  167 (222)
                      ..|+.| .+.||.+.... ....|  .+|++|+|+|+.||.|.|.   ..++|+.+| |++ .|.|++.|+.| .+.||.
T Consensus         3 ~~C~~P-~i~nG~~~~~~~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~-~p~C~~~C~~p-~~~nG~   78 (124)
T 2yby_A            3 KPCEFP-QFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEP-EVPCVRKCVFH-YVENGD   78 (124)
T ss_dssp             CCBCCC-CCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTCSSCEEEEEETTE-EES-SSCCEEEEEEC-CCBTBC
T ss_pred             ccCCCC-cccCCEEEecccccccccccCCCEEEEECCCCCEeCCCCCccEEEecCCC-ccC-CCceeeECcCC-CCCCCe
Confidence            579886 78899875210 12234  8899999999999999998   899999999 999 59999999974 788998


Q ss_pred             EecCccccCCCCeEEEEcCCCCeeccCCCCCC-cceeCCCCcccCCCCcee
Q psy14531        168 IIPLKFFYDPGDHIQVTCNDGYVKPLDITPTS-GPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       168 ~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~-~~~C~~~G~W~~~~p~C~  217 (222)
                      +...+..|.+|+.|+|.|++||.+.|.    . .++|+.+| |++ +|+|+
T Consensus        79 ~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~~C~~~g-Ws~-~P~C~  123 (124)
T 2yby_A           79 SAYWEKVYVQGQSLKVQCYNGYSLQNG----QDTMTCTENG-WSP-PPKCI  123 (124)
T ss_dssp             CCSSCEEEETTCEEECCBCTTCCCSSS----SCEEEEETTE-EES-CSBCC
T ss_pred             EecccCcccCCCEEEEECCCCCEecCC----CCeEEcCCCC-cCC-CCeec
Confidence            866666788899999999999999887    5 48999888 998 59996

>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}

Probab=99.83  E-value=7.6e-22  Score=143.07  Aligned_cols=112  Identities=24%  Similarity=0.456  Sum_probs=93.4

Q ss_pred             eeCCCCccCCCeEEec---cCCc--ccccEEEEEcCCCCeEeCC---CceEeCCCCeeeCCCCceeccceeeeecccccc
Q psy14531         23 IICPKIVVENPYLTLV---EQNN--TYRGHAIFQCSWGYQLKGP---PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV   94 (222)
Q Consensus        23 ~~C~~p~~~ng~~~~~---~~~~--~~g~~~~~~C~~gy~l~G~---~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~   94 (222)
                      +.|+.|.++||.+...   ...|  .+|+.|+|+|+.||.|.|.   ..++|+.+| |+.. |.|+.             
T Consensus         3 ~~C~~P~i~nG~~~~~~~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~-p~C~~-------------   67 (124)
T 2yby_A            3 KPCEFPQFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEPE-VPCVR-------------   67 (124)
T ss_dssp             CCBCCCCCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTCSSCEEEEEETTE-EESS-SCCEE-------------
T ss_pred             ccCCCCcccCCEEEecccccccccccCCCEEEEECCCCCEeCCCCCccEEEecCCC-ccCC-Cceee-------------
Confidence            5699885599998743   1224  7899999999999999999   899999999 9985 99986             


Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCC-eEEeCcCCeeeCCCCcee
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE-TIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~-~~~C~~~g~Ws~~~p~C~  154 (222)
                      .|+. +.+.||.+.  .....|.+|++|+|+|+.||.|.|.. .++|+++| |+. .|.|+
T Consensus        68 ~C~~-p~~~nG~~~--~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~~C~~~g-Ws~-~P~C~  123 (124)
T 2yby_A           68 KCVF-HYVENGDSA--YWEKVYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WSP-PPKCI  123 (124)
T ss_dssp             EEEE-CCCBTBCCC--SSCEEEETTCEEECCBCTTCCCSSSSCEEEEETTE-EES-CSBCC
T ss_pred             ECcC-CCCCCCeEe--cccCcccCCCEEEEECCCCCEecCCCCeEEcCCCC-cCC-CCeec
Confidence            7997 456799873  23466888999999999999999988 59999999 999 68885

>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A

Probab=99.83  E-value=2.3e-21  Score=140.72  Aligned_cols=113  Identities=23%  Similarity=0.395  Sum_probs=89.1

Q ss_pred             EeeCCCCccCCCeEEeccC-----CcccccEEEEEcCCCCeEeCCC---ceEeCCCCeeeCCCCceeccceeeeeccccc
Q psy14531         22 QIICPKIVVENPYLTLVEQ-----NNTYRGHAIFQCSWGYQLKGPP---DIVCQKNGSWSGAIPECNAFFFFFFFFFFNP   93 (222)
Q Consensus        22 ~~~C~~p~~~ng~~~~~~~-----~~~~g~~~~~~C~~gy~l~G~~---~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~   93 (222)
                      .+.|+.|.++||.+.....     .+.+|+.|+|+|+.||.|.|..   .++|+.+| |+ +.|.|.+            
T Consensus         4 ~k~C~~P~i~nG~~~~~~~~~~~~p~~~G~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws-~~P~C~~------------   69 (125)
T 4ayi_A            4 LKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WS-PAVPCLR------------   69 (125)
T ss_dssp             --CBCSCCCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EE-SSSCCEE------------
T ss_pred             CccCcCCccCCCEEeccccccccccccCCCEEEEEcCCCCEECCCCccCEEEeCCCc-cc-CCCCCcC------------
Confidence            3569988779998864321     1356999999999999999875   37999887 99 5689998            


Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc-CCCeEEeCcCCeeeCCCCcee
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL-GEETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~-g~~~~~C~~~g~Ws~~~p~C~  154 (222)
                      +.|. | .+.||.+.  .....|.+|++|+|+|+.||.|. |...++|+++| |+. .|.|.
T Consensus        70 ~~c~-P-~i~nG~~~--~~~~~y~~g~~v~y~C~~Gy~l~~g~~~~~C~~~g-Ws~-~P~Cv  125 (125)
T 4ayi_A           70 KCYF-P-YLENGYNQ--NHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP-TPRCI  125 (125)
T ss_dssp             EEEC-C-CCTTBCCT--TTTCEEETTCEEECCBCTTCCCGGGCCEEEEETTE-EES-CCCCC
T ss_pred             cCCC-C-CCCCCEEe--CCCCcccCCCEEEEEcCCCCEeCCCCceEEECCCc-ccC-cCEeC
Confidence            6664 3 45799764  23567899999999999999996 88999999776 996 78884

>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A

Probab=99.80  E-value=8e-21  Score=137.83  Aligned_cols=114  Identities=28%  Similarity=0.589  Sum_probs=87.9

Q ss_pred             ccCCCCCCCCCceEEeCCC---CCCcCCCCEEEEEcCCCCEEcCCC---eEEeCcCCeeeCCCCceeecCCCCCCCCCeE
Q psy14531         94 VHCPVPALPLNGHLIEDPT---GGPYRVGAILQFACNDRHHLLGEE---TIVCTETGRWSRAPPRCKARCEYPGEPQNGK  167 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~---~~~~~~g~~~~~~C~~gy~~~g~~---~~~C~~~g~Ws~~~p~C~~~C~~p~~~~~g~  167 (222)
                      ..|+.|. ++||.+.....   ...+.+|++|+|+|+.||.|.|..   .++|+++| |+. .|.|...|-.| .+.||.
T Consensus         5 k~C~~P~-i~nG~~~~~~~~~~~~p~~~G~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~-~P~C~~~~c~P-~i~nG~   80 (125)
T 4ayi_A            5 KPCDYPD-IKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSP-AVPCLRKCYFP-YLENGY   80 (125)
T ss_dssp             -CBCSCC-CTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EES-SSCCEEEEECC-CCTTBC
T ss_pred             ccCcCCc-cCCCEEeccccccccccccCCCEEEEEcCCCCEECCCCccCEEEeCCCc-ccC-CCCCcCcCCCC-CCCCCE
Confidence            3688765 67998753211   112467999999999999999874   47999877 996 68898444444 578998


Q ss_pred             EecCccccCCCCeEEEEcCCCCeec-cCCCCCCcceeCCCCcccCCCCcee
Q psy14531        168 IIPLKFFYDPGDHIQVTCNDGYVKP-LDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       168 ~~~~~~~~~~g~~v~y~C~~gy~~~-~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      +...+..|.+|++|+|.|++||.+. |+    ..++|+++| |++ +|+|+
T Consensus        81 ~~~~~~~y~~g~~v~y~C~~Gy~l~~g~----~~~~C~~~g-Ws~-~P~Cv  125 (125)
T 4ayi_A           81 NQNHGRKFVQGKSIDVACHPGYALPKAQ----TTVTCMENG-WSP-TPRCI  125 (125)
T ss_dssp             CTTTTCEEETTCEEECCBCTTCCCGGGC----CEEEEETTE-EES-CCCCC
T ss_pred             EeCCCCcccCCCEEEEEcCCCCEeCCCC----ceEEECCCc-ccC-cCEeC
Confidence            8777777888999999999999986 66    789999666 995 79985

>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A

Probab=99.78  E-value=1.4e-18  Score=149.49  Aligned_cols=133  Identities=25%  Similarity=0.530  Sum_probs=103.2

Q ss_pred             CeeeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEE------cCCCeEEeCcC
Q psy14531         70 GSWSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHL------LGEETIVCTET  143 (222)
Q Consensus        70 g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~------~g~~~~~C~~~  143 (222)
                      +-|+. .+.|+.            +.|+.|+.+.||.+..  ....|.+|++|+|+|+.||.|      .|+..++|+.+
T Consensus         4 ~gw~~-~~~c~~------------~~C~~p~~~~ng~~~~--~~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~   68 (403)
T 1zjk_A            4 TGWKI-HYTSTA------------HACPYPMAPPNGHVSP--VQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKD   68 (403)
T ss_dssp             ----------CC------------CCBCCCCCCTTEEESS--CCSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSS
T ss_pred             CceEE-EEEECC------------ccCcCCCCCCCceEcc--cCCccccCCEEEEEeCCCCEEccCCCcCCceeeEcCCC
Confidence            34984 578988            8999999999998853  356799999999999999999      35568999999


Q ss_pred             CeeeCCCCcee-ecCCCCCCCCCeEEecC--ccccCCCCeEEEEcCCCC-eeccCCCCCCcceeCCCCcccC-----CCC
Q psy14531        144 GRWSRAPPRCK-ARCEYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGY-VKPLDITPTSGPYCQSDGTWSL-----DIP  214 (222)
Q Consensus       144 g~Ws~~~p~C~-~~C~~p~~~~~g~~~~~--~~~~~~g~~v~y~C~~gy-~~~~~~~~~~~~~C~~~G~W~~-----~~p  214 (222)
                      |+|+...|.|+ +.|+.|+.+.||.+...  ...+..|+.|+|.|++|| .+.+..   ..++|..+|.|+.     .+|
T Consensus        69 g~Ws~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~~~g~~v~~~C~~gyy~l~~~~---~~~~C~~~g~W~~~~~~~~~p  145 (403)
T 1zjk_A           69 GSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVND---GKYVCEADGFWTSSKGEKSLP  145 (403)
T ss_dssp             SSBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEESSC---SEEEECTTSCEEETTCCCSCC
T ss_pred             CEeCCCCCCcccccCCCCCCcCCccEEEccCCCCCccCCeEEEeCCCchhheecCC---CCEEECCCcccccccCCccCC
Confidence            99999899999 69999999999987632  334566999999999997 444431   4789999999997     488


Q ss_pred             ceeeCc
Q psy14531        215 HCTNYT  220 (222)
Q Consensus       215 ~C~~~~  220 (222)
                      .|.+.+
T Consensus       146 ~C~~~C  151 (403)
T 1zjk_A          146 VCEPVC  151 (403)
T ss_dssp             EEEECC
T ss_pred             CCCCCC
Confidence            887654

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=99.75  E-value=9.6e-18  Score=144.02  Aligned_cols=127  Identities=29%  Similarity=0.572  Sum_probs=104.7

Q ss_pred             eeCCCCcc-CCCe-EEeccCCcccccEEEEEcCCCCeEe-C-----CCceEeCCCCeeeCCCCceeccceeeeecccccc
Q psy14531         23 IICPKIVV-ENPY-LTLVEQNNTYRGHAIFQCSWGYQLK-G-----PPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPV   94 (222)
Q Consensus        23 ~~C~~p~~-~ng~-~~~~~~~~~~g~~~~~~C~~gy~l~-G-----~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~   94 (222)
                      +.|+.|+. .||. +...+..|.+|+.|+|+|++||.|. |     +..++|+.||+|+...|.|+.            +
T Consensus         1 i~C~~p~~~~n~~~~~~~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~~------------~   68 (399)
T 1gpz_A            1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI------------K   68 (399)
T ss_dssp             CCBCCCCCSSTTEEEESCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEE------------C
T ss_pred             CCCcCCCCCCCCCCcCCCCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCceee------------e
Confidence            46999887 8954 4555678999999999999999995 4     446779999999999999998            7


Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCE-EcC--------CCeEEeCcCCeeeCC-----CCceeecCCCC
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH-LLG--------EETIVCTETGRWSRA-----PPRCKARCEYP  160 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~-~~g--------~~~~~C~~~g~Ws~~-----~p~C~~~C~~p  160 (222)
                      .|+.|+.+.||.+........+.+++.++|.|+.||. +.+        ...++|..+|.|+..     .|.|...|+.+
T Consensus        69 ~C~~p~~~~nG~~~~~~~~~~~~~~~~v~y~C~~gy~~l~~~~~~~~~~~g~~~C~~~g~w~~~~~~~~~p~C~~~CG~~  148 (399)
T 1gpz_A           69 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKP  148 (399)
T ss_dssp             BCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEEC-------CCCEEEECTTSSEEESSSCSSCCEEEECCSCC
T ss_pred             eCCCCCCCCCcceEeecCCCCceeeEEEEEecCCchhccccccCcccccCceEEECCCceEeccccccccCCccCCCCCc
Confidence            9999999999987654445667889999999999993 432        467899999999864     68899899976


Q ss_pred             C
Q psy14531        161 G  161 (222)
Q Consensus       161 ~  161 (222)
                      .
T Consensus       149 ~  149 (399)
T 1gpz_A          149 V  149 (399)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*

Probab=99.70  E-value=4.1e-17  Score=126.52  Aligned_cols=117  Identities=19%  Similarity=0.435  Sum_probs=90.7

Q ss_pred             cC-CCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcC--CCeEEeCcCC---eeeCCCCceee-------------
Q psy14531         95 HC-PVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLG--EETIVCTETG---RWSRAPPRCKA-------------  155 (222)
Q Consensus        95 ~C-~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g--~~~~~C~~~g---~Ws~~~p~C~~-------------  155 (222)
                      .| +.|+.+.|+.+.    ...|..|++|.|.|+.||+..+  +..++|..++   +|+. .+.|..             
T Consensus         2 ~C~g~PP~l~nA~~~----~~~Y~~Gt~V~Y~C~~Gf~r~~~~s~~i~C~~~~~~~~Wt~-~~fC~~~~~~~~~~~v~p~   76 (217)
T 2b5i_D            2 LCDDDPPEIPHATFK----AMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN-QCQCTSSATRQTTKQVTPQ   76 (217)
T ss_dssp             CCCSCCCCCTTEEEE----CSSBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC-CCCEEEC------------
T ss_pred             CCCCCCCCCcccccc----CccCCCCCEEEEECCCCceeCCCCCceEEecCCCCcccccC-CceeecccccCcccccccC
Confidence            47 678888898875    4689999999999999998774  6799997555   5988 666631             


Q ss_pred             --------------------------cCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCe--eccCCCCCCcceeCC-C
Q psy14531        156 --------------------------RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYV--KPLDITPTSGPYCQS-D  206 (222)
Q Consensus       156 --------------------------~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~--~~~~~~~~~~~~C~~-~  206 (222)
                                                .|+.|+.+.|+.+. ....|..|+.|+|.|++||.  +.|.    ..++|.. +
T Consensus        77 ~~e~~~~k~t~~q~~~~~~~~~n~~~~C~~PP~i~n~~l~-~~~~y~~Gs~V~Y~C~eGY~~ll~G~----~~~~C~~~~  151 (217)
T 2b5i_D           77 PEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATE-RIYHFVVGQMVYYQCVQGYRALHRGP----AESVCKMTH  151 (217)
T ss_dssp             --------------------------CBCCCCCCSSCCSS-CCEECCTTCEEEEEECTTCEEEESSC----SEEEEEECS
T ss_pred             chhhccccccccccccCccccccccccCCCCCcccccccc-ccccccCCCEEEEECcCCchhcccCC----cceEeecCC
Confidence                                      48888888887653 45689999999999999995  5676    7899973 4


Q ss_pred             C--cccCCCCceeeCcC
Q psy14531        207 G--TWSLDIPHCTNYTD  221 (222)
Q Consensus       207 G--~W~~~~p~C~~~~~  221 (222)
                      |  .|+.++|.|+...+
T Consensus       152 G~~~WS~p~p~C~~~~~  168 (217)
T 2b5i_D          152 GKTRWTQPQLICTGEME  168 (217)
T ss_dssp             SCEEECCCCEEEEC---
T ss_pred             CccccCCCCcceEeccc
Confidence            6  89999999998764

>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.66  E-value=1.8e-16  Score=103.97  Aligned_cols=68  Identities=25%  Similarity=0.408  Sum_probs=63.6

Q ss_pred             ccCCCCCeeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531         12 QWSGEVPTCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        12 ~Ws~~~p~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      .|+...|.|+.+.|+.|.. +||.+.  ...|.+|++|+|+|+.||.|.|+..++|+.+|+|+.+.|.|+.
T Consensus         1 Gws~~~p~C~~~~C~~p~~p~nG~~~--~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~   69 (73)
T 2ehf_A            1 GSSGSSGEIEKGGCGDPGIPAYGKRT--GSSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSCSG   69 (73)
T ss_dssp             CCCCCCCCCCCCCSCCCCCCSSSEEE--CSCCCTTCEEEEECCSSCCBCSCSEEEBCSSSSBSSCCCCBCC
T ss_pred             CCCCCCCeEeeeECcCCCCCCCCEEe--CCcccCCCEEEEEcCCCCEEeCCCeEEECCCCeECCCCCeEec
Confidence            3999999999999999988 999987  3678999999999999999999999999999999999999987

>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.66  E-value=2.5e-16  Score=103.24  Aligned_cols=71  Identities=30%  Similarity=0.626  Sum_probs=65.8

Q ss_pred             eeCCCCceeccceeeeecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCC
Q psy14531         72 WSGAIPECNAFFFFFFFFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPP  151 (222)
Q Consensus        72 W~~~~p~C~~~~~~~~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p  151 (222)
                      |+...|.|+.            +.|+.|..+.||.+.    ...|.+|++|+|+|+.||.|.|+..++|+++|+|+...|
T Consensus         2 ws~~~p~C~~------------~~C~~p~~p~nG~~~----~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~~P   65 (73)
T 2ehf_A            2 SSGSSGEIEK------------GGCGDPGIPAYGKRT----GSSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKP   65 (73)
T ss_dssp             CCCCCCCCCC------------CCSCCCCCCSSSEEE----CSCCCTTCEEEEECCSSCCBCSCSEEEBCSSSSBSSCCC
T ss_pred             CCCCCCeEee------------eECcCCCCCCCCEEe----CCcccCCCEEEEEcCCCCEEeCCCeEEECCCCeECCCCC
Confidence            9999999999            899999999999886    367889999999999999999999999999999999999


Q ss_pred             ceeecCC
Q psy14531        152 RCKARCE  158 (222)
Q Consensus       152 ~C~~~C~  158 (222)
                      .|+..|+
T Consensus        66 ~C~~~cg   72 (73)
T 2ehf_A           66 SCSGPSS   72 (73)
T ss_dssp             CBCCCCC
T ss_pred             eEecccC
Confidence            9997775

>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1

Probab=99.65  E-value=1e-15  Score=131.36  Aligned_cols=126  Identities=26%  Similarity=0.500  Sum_probs=97.1

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc-C-----CCeEEeCcCCeeeCCCCcee-ecCCCCCCCCCe
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL-G-----EETIVCTETGRWSRAPPRCK-ARCEYPGEPQNG  166 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~-g-----~~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g  166 (222)
                      +.|+.|+.+.|+.+.. .....|.+|++|+|+|+.||.|. |     ...++|+.||+|+...|.|+ +.|+.|+.+.||
T Consensus         1 i~C~~p~~~~n~~~~~-~~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~~~~C~~p~~~~nG   79 (399)
T 1gpz_A            1 IKCPQPKTLDEFTIIQ-NLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNG   79 (399)
T ss_dssp             CCBCCCCCSSTTEEEE-SCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTE
T ss_pred             CCCcCCCCCCCCCCcC-CCCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCceeeeeCCCCCCCCCc
Confidence            3699999999955543 23678999999999999999986 4     34567999999999999998 899999999999


Q ss_pred             EEec--CccccCCCCeEEEEcCCCCe-eccCCC----CCCcceeCCCCcccCC-----CCceeeCc
Q psy14531        167 KIIP--LKFFYDPGDHIQVTCNDGYV-KPLDIT----PTSGPYCQSDGTWSLD-----IPHCTNYT  220 (222)
Q Consensus       167 ~~~~--~~~~~~~g~~v~y~C~~gy~-~~~~~~----~~~~~~C~~~G~W~~~-----~p~C~~~~  220 (222)
                      .+..  ....+..++.++|.|++||. +.+..+    ....++|..+|.|...     +|.|.+.+
T Consensus        80 ~~~~~~~~~~~~~~~~v~y~C~~gy~~l~~~~~~~~~~~g~~~C~~~g~w~~~~~~~~~p~C~~~C  145 (399)
T 1gpz_A           80 DFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVC  145 (399)
T ss_dssp             EEEESSSTTCCBTTCEEEEEECTTTEEEEC-------CCCEEEECTTSSEEESSSCSSCCEEEECC
T ss_pred             ceEeecCCCCceeeEEEEEecCCchhccccccCcccccCceEEECCCceEeccccccccCCccCCC
Confidence            7653  23445669999999999994 322100    0156899999999864     68887653

>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*

Probab=99.63  E-value=7.7e-16  Score=119.38  Aligned_cols=124  Identities=19%  Similarity=0.290  Sum_probs=89.4

Q ss_pred             C-CCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeC--CCceEeCCCC---eeeCCCCceeccceeee----ecc---
Q psy14531         25 C-PKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKG--PPDIVCQKNG---SWSGAIPECNAFFFFFF----FFF---   90 (222)
Q Consensus        25 C-~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g---~W~~~~p~C~~~~~~~~----~~~---   90 (222)
                      | .+|+. +|+.+.  ...|..|+.|.|.|+.||.+.+  +..++|+.++   +|+. .+.|......+.    +..   
T Consensus         3 C~g~PP~l~nA~~~--~~~Y~~Gt~V~Y~C~~Gf~r~~~~s~~i~C~~~~~~~~Wt~-~~fC~~~~~~~~~~~v~p~~~e   79 (217)
T 2b5i_D            3 CDDDPPEIPHATFK--AMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN-QCQCTSSATRQTTKQVTPQPEE   79 (217)
T ss_dssp             CCSCCCCCTTEEEE--CSSBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC-CCCEEEC---------------
T ss_pred             CCCCCCCCcccccc--CccCCCCCEEEEECCCCceeCCCCCceEEecCCCCcccccC-CceeecccccCcccccccCchh
Confidence            7 45555 888775  3679999999999999998764  6799998665   5986 677865211000    000   


Q ss_pred             --------c-----------ccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC--EEcCCCeEEeCc-CC--ee
Q psy14531         91 --------F-----------NPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH--HLLGEETIVCTE-TG--RW  146 (222)
Q Consensus        91 --------~-----------~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy--~~~g~~~~~C~~-~g--~W  146 (222)
                              .           -...|..|+.+.|+.+.   ....|.+|++|+|.|+.||  .+.|+..++|.. +|  .|
T Consensus        80 ~~~~k~t~~q~~~~~~~~~n~~~~C~~PP~i~n~~l~---~~~~y~~Gs~V~Y~C~eGY~~ll~G~~~~~C~~~~G~~~W  156 (217)
T 2b5i_D           80 QKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATE---RIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRW  156 (217)
T ss_dssp             -----------------------CBCCCCCCSSCCSS---CCEECCTTCEEEEEECTTCEEEESSCSEEEEEECSSCEEE
T ss_pred             hccccccccccccCccccccccccCCCCCcccccccc---ccccccCCCEEEEECcCCchhcccCCcceEeecCCCcccc
Confidence                    0           00169988888898653   3577999999999999999  468999999974 46  89


Q ss_pred             eCCCCcee
Q psy14531        147 SRAPPRCK  154 (222)
Q Consensus       147 s~~~p~C~  154 (222)
                      +.+.|.|+
T Consensus       157 S~p~p~C~  164 (217)
T 2b5i_D          157 TQPQLICT  164 (217)
T ss_dssp             CCCCEEEE
T ss_pred             CCCCcceE
Confidence            99889998

>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=1.4e-15  Score=99.90  Aligned_cols=69  Identities=23%  Similarity=0.434  Sum_probs=62.0

Q ss_pred             eEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceeccceeeeecccccccCCC
Q psy14531         20 CQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPV   98 (222)
Q Consensus        20 C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~   98 (222)
                      +..+.|+.|+. +||.+......|.+|++|+|+|+.||.|.|+..++|+.+|+|+.+.|.|+.            +.|+.
T Consensus         3 s~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~------------v~C~~   70 (74)
T 2yra_A            3 SGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEK------------TEESG   70 (74)
T ss_dssp             CCCCCCCCCCCCTTEEECCSSSSCCTTCEEEEEECTTEEEESCSEEEBCTTSCBSSCCCEEEE------------CSCCS
T ss_pred             ccCCcCcCCCCCCCeEEeccCCCccCCCEEEEECCCCCEECCCCceEECCCCEECCCCCEEee------------cCCcC
Confidence            45678999887 999988665678999999999999999999999999999999999999999            89987


Q ss_pred             CC
Q psy14531         99 PA  100 (222)
Q Consensus        99 p~  100 (222)
                      |+
T Consensus        71 P~   72 (74)
T 2yra_A           71 PS   72 (74)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=4.1e-14  Score=92.80  Aligned_cols=67  Identities=22%  Similarity=0.442  Sum_probs=59.6

Q ss_pred             cccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee-ecCCCCC
Q psy14531         93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK-ARCEYPG  161 (222)
Q Consensus        93 ~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~~p~  161 (222)
                      .+.|+.|+.+.||.+..  ....|.+|++|+|+|+.||.|.|+..++|+++|+|+...|.|+ +.|..|.
T Consensus         5 ~~~C~~p~~~~nG~~~~--~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~v~C~~P~   72 (74)
T 2yra_A            5 SSGCSDLPEIQNGWKTT--SHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKTEESGPS   72 (74)
T ss_dssp             CCCCCCCCCCTTEEECC--SSSSCCTTCEEEEEECTTEEEESCSEEEBCTTSCBSSCCCEEEECSCCSSS
T ss_pred             CCcCcCCCCCCCeEEec--cCCCccCCCEEEEECCCCCEECCCCceEECCCCEECCCCCEEeecCCcCCC
Confidence            37899999999998763  2456899999999999999999999999999999999899999 7898775

>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}

Probab=99.49  E-value=1.3e-13  Score=93.01  Aligned_cols=69  Identities=22%  Similarity=0.483  Sum_probs=60.8

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC-CEEcCC-CeEEeCcCCeee-----CCCCceeecCCCCCC
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR-HHLLGE-ETIVCTETGRWS-----RAPPRCKARCEYPGE  162 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g-y~~~g~-~~~~C~~~g~Ws-----~~~p~C~~~C~~p~~  162 (222)
                      +.|+.|+.+.||.+........|.+|++|+|+|+.| |.|.|. ..++|+++|+|+     ...|.|+..|+.|..
T Consensus         6 v~C~~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~~~~~~~~P~C~~vCg~P~~   81 (86)
T 3tvj_A            6 VDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKSLPVCEPVCGLSAR   81 (86)
T ss_dssp             CBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCCEEEECTTSSEEETTSCCSCCCEEECCCCCCC
T ss_pred             eeCCCCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCCEEEECCCCCCCcCCCCCCCCeeECcCCCCCc
Confidence            899999999999987543456789999999999995 788998 899999999999     579999988999865

>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}

Probab=99.45  E-value=1.8e-13  Score=92.32  Aligned_cols=70  Identities=21%  Similarity=0.476  Sum_probs=60.0

Q ss_pred             eeEEeeCCCCcc-CCCeEEec--cCCcccccEEEEEcCCC-CeEeCC-CceEeCCCCeee-----CCCCceeccceeeee
Q psy14531         19 TCQQIICPKIVV-ENPYLTLV--EQNNTYRGHAIFQCSWG-YQLKGP-PDIVCQKNGSWS-----GAIPECNAFFFFFFF   88 (222)
Q Consensus        19 ~C~~~~C~~p~~-~ng~~~~~--~~~~~~g~~~~~~C~~g-y~l~G~-~~~~C~~~g~W~-----~~~p~C~~~~~~~~~   88 (222)
                      .|+.+.|+.|+. +||.+...  ...|.+|+.|+|+|+.| |.|.|. ..++|+++|+|+     .++|.|++       
T Consensus         2 ~C~~v~C~~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~~~~~~~~P~C~~-------   74 (86)
T 3tvj_A            2 SMTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKSLPVCEP-------   74 (86)
T ss_dssp             --CCCBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCCEEEECTTSSEEETTSCCSCCCEEE-------
T ss_pred             eeeeeeCCCCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCCEEEECCCCCCCcCCCCCCCCeeEC-------
Confidence            588999999987 99998854  35689999999999996 778998 899999999999     68999999       


Q ss_pred             cccccccCCCCCC
Q psy14531         89 FFFNPVHCPVPAL  101 (222)
Q Consensus        89 ~~~~~~~C~~p~~  101 (222)
                           + |..|..
T Consensus        75 -----v-Cg~P~~   81 (86)
T 3tvj_A           75 -----V-CGLSAR   81 (86)
T ss_dssp             -----C-CCCCCC
T ss_pred             -----c-CCCCCc
Confidence                 6 998775

>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A

Probab=99.45  E-value=7e-14  Score=90.16  Aligned_cols=64  Identities=22%  Similarity=0.403  Sum_probs=54.7

Q ss_pred             CceeecC-CCCCCCCCeEEecC--ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        151 PRCKARC-EYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       151 p~C~~~C-~~p~~~~~g~~~~~--~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      +.|...| ..++.+.||.+...  ...|..|+.|+|.|++||.+.|+    ..++|+ +|+|++++|.|..+
T Consensus         2 ~~C~~~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~----~~~~C~-~g~Ws~~~P~C~~i   68 (68)
T 1srz_A            2 AEFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGS----SRSVCS-QGQWSTPKPHCQVN   68 (68)
T ss_dssp             CCSSSSCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSC----CEEEEE-TTEESSCCCCEEEC
T ss_pred             CcceeECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCC----CcCEEC-CCEEeCCCCEeeEC
Confidence            5788889 45667899999853  33577899999999999999988    889998 99999999999875

>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A

Probab=99.42  E-value=2.3e-13  Score=87.67  Aligned_cols=60  Identities=30%  Similarity=0.611  Sum_probs=51.2

Q ss_pred             cCC-CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceee
Q psy14531         95 HCP-VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA  155 (222)
Q Consensus        95 ~C~-~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~  155 (222)
                      .|+ +++.+.||.+........|.+|++|+|+|+.||.|.|+..++|+ +|+|++..|.|+.
T Consensus         7 ~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~~~~~C~-~g~Ws~~~P~C~~   67 (68)
T 1srz_A            7 ICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHCQV   67 (68)
T ss_dssp             SCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCCEEEEE-TTEESSCCCCEEE
T ss_pred             ECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCCCcCEEC-CCEEeCCCCEeeE
Confidence            894 56778899987432344588999999999999999999999999 9999998999973

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=99.11  E-value=5.1e-11  Score=100.78  Aligned_cols=78  Identities=18%  Similarity=0.433  Sum_probs=58.3

Q ss_pred             eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCC------ceEeCCCCeeeCCCCceeccceeeeeccc
Q psy14531         19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP------DIVCQKNGSWSGAIPECNAFFFFFFFFFF   91 (222)
Q Consensus        19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~------~~~C~~~g~W~~~~p~C~~~~~~~~~~~~   91 (222)
                      .+....|+.|.. .||.+......+.+|+.|+|+|++||+|.|..      .++|+.+|+|+.+.|.|++          
T Consensus       276 ~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P~C~~----------  345 (361)
T 4aqb_A          276 RAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKK----------  345 (361)
T ss_dssp             EEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEE----------
T ss_pred             EEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCCeeeE----------
Confidence            577778999888 99999877778899999999999999998875      4789999999999999999          


Q ss_pred             ccccCCCCCCCCCceEE
Q psy14531         92 NPVHCPVPALPLNGHLI  108 (222)
Q Consensus        92 ~~~~C~~p~~~~~g~~~  108 (222)
                        +.|+.|..+.||.+.
T Consensus       346 --~~Cg~p~~~~ng~vt  360 (361)
T 4aqb_A          346 --NEIDLESELKSEQVT  360 (361)
T ss_dssp             --CC-------------
T ss_pred             --EeCCCCCCCCCCccc
Confidence              899999999999764

>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}

Probab=99.08  E-value=6.2e-10  Score=94.11  Aligned_cols=80  Identities=20%  Similarity=0.458  Sum_probs=57.6

Q ss_pred             ecccccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCC------eEEeCcCCeeeCCCCcee-ecCCCC
Q psy14531         88 FFFFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE------TIVCTETGRWSRAPPRCK-ARCEYP  160 (222)
Q Consensus        88 ~~~~~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~------~~~C~~~g~Ws~~~p~C~-~~C~~p  160 (222)
                      .|......|+.|..+.||.+..  ....|.+|+.|+|+|+.||.|.|+.      .++|+.+|+|+.+.|.|+ +.|+.|
T Consensus       274 ~y~~~~~~C~~~~~p~~G~~~~--~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P~C~~~~Cg~p  351 (361)
T 4aqb_A          274 SYRAAGNECPELQPPVHGKIEP--SQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKKNEIDLE  351 (361)
T ss_dssp             EEEEECCEECCCCCCTTEEEES--CCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECC----
T ss_pred             EEEEccCCCCCCCCCCCCEEec--CCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCCeeeEEeCCCC
Confidence            4556667899999999998863  3567889999999999999999865      478999999999999999 899999


Q ss_pred             CCCCCeEEe
Q psy14531        161 GEPQNGKII  169 (222)
Q Consensus       161 ~~~~~g~~~  169 (222)
                      ..+.||.+.
T Consensus       352 ~~~~ng~vt  360 (361)
T 4aqb_A          352 SELKSEQVT  360 (361)
T ss_dssp             ---------
T ss_pred             CCCCCCccc
Confidence            999998763

>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1

Probab=98.47  E-value=2.2e-07  Score=59.84  Aligned_cols=59  Identities=19%  Similarity=0.425  Sum_probs=48.8

Q ss_pred             ccccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCC-----eeeCCCCcee
Q psy14531         92 NPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETG-----RWSRAPPRCK  154 (222)
Q Consensus        92 ~~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g-----~Ws~~~p~C~  154 (222)
                      ..+.|+.|+..+|+.+    ....|.++++++|.|.+||.-.  +...+.|..||     .|+.+...|.
T Consensus         7 ~~~~C~~Pp~ve~a~~----r~~~y~v~s~vRYqC~~Gf~rr~g~s~lirC~~n~~~~~~~Wt~P~L~CI   72 (78)
T 2psm_F            7 GGTTCPPPVSIEHADI----RVKNYSVNSRERYVCNSGFKRKAGTSTLIECVINKNTNVAHWTTPSLKCI   72 (78)
T ss_dssp             ---CCCCCCCCTTEEC----CCSCCSTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEE
T ss_pred             CCCcCCCCCccccccc----ceeeeccCCEEEEecchhHHhhCCCCCceEEEcCCCcCcceecCCCeEEe
Confidence            3589999999999976    3688999999999999999755  46889999876     6998888886

>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1

Probab=98.47  E-value=1.9e-07  Score=60.16  Aligned_cols=62  Identities=18%  Similarity=0.338  Sum_probs=50.6

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC-----cccCCCCceeeCc
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG-----TWSLDIPHCTNYT  220 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G-----~W~~~~p~C~~~~  220 (222)
                      ..|+.|+.+.|..+  ....|..++.++|.|++||..... ++ ..++|+.||     .|+.+...|++..
T Consensus         9 ~~C~~Pp~ve~a~~--r~~~y~v~s~vRYqC~~Gf~rr~g-~s-~lirC~~n~~~~~~~Wt~P~L~CI~ep   75 (78)
T 2psm_F            9 TTCPPPVSIEHADI--RVKNYSVNSRERYVCNSGFKRKAG-TS-TLIECVINKNTNVAHWTTPSLKCIRDP   75 (78)
T ss_dssp             -CCCCCCCCTTEEC--CCSCCSTTCEEECEECTTEEECTT-CC-CEEEEEEETTTTEEEECCCCCCEEECT
T ss_pred             CcCCCCCccccccc--ceeeeccCCEEEEecchhHHhhCC-CC-CceEEEcCCCcCcceecCCCeEEecCC
Confidence            57999999999877  667899999999999999976532 22 789999876     6999999998754

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=98.09  E-value=7.7e-06  Score=68.11  Aligned_cols=67  Identities=22%  Similarity=0.603  Sum_probs=54.0

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEcCC--CeEEeCcCCeeeC-----CCCceeecCCCCCCC
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLLGE--ETIVCTETGRWSR-----APPRCKARCEYPGEP  163 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~g~--~~~~C~~~g~Ws~-----~~p~C~~~C~~p~~~  163 (222)
                      +.|+.|+.+.||.+.   ......+++.++|+|+.+| .+.+.  ..++|.++|.|..     ..|.|...|+.+..+
T Consensus         2 v~C~~p~~~~~g~~~---~~~~~~~~s~~~~~C~~~yy~~~~~~~~~~~C~~~g~w~~~~~~~~~~~c~~~CG~~~~~   76 (333)
T 1elv_A            2 LDCGIPESIENGKVE---DPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCVPVCGVPREP   76 (333)
T ss_dssp             CBCCSCCCCTTEEEC---CCSCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCCEEECCSCCSSC
T ss_pred             CCCCCCCcccCCcee---cCCCCccceeEEEECCCCeEeeecCCCceEEECCCCeEcccccccccccccCCcCCCCCc
Confidence            689999999999875   2345677999999999996 55554  7899999999986     678999999987543

>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A

Probab=98.03  E-value=2.4e-06  Score=57.65  Aligned_cols=61  Identities=20%  Similarity=0.345  Sum_probs=49.4

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCC-----CcccCCCCceeeC
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSD-----GTWSLDIPHCTNY  219 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~-----G~W~~~~p~C~~~  219 (222)
                      +.|+.|+.+.|..+  ....|..|+.++|.|+.||..... ++ ..++|..+     .+|+.+...|+..
T Consensus         6 ~~C~~Pp~~EHad~--rv~~y~v~s~vRYqC~~Gykrkag-ts-ali~Ck~~~~~g~~~WT~P~LkCI~d   71 (107)
T 2z3q_B            6 ITCPPPMSVEHADI--WVKSYSLYSRERYICNSGFKRKAG-TS-SLTECVLNKATNVAHWTTPSLKCIRD   71 (107)
T ss_dssp             CBCCCCCCCTTEEC--CCSCCBTTCEEECEECTTEEECTT-CC-CEEEEEEETTTTEEEECCCCCCEEEC
T ss_pred             ccCCCCCCcccccc--eeEEeccCCEEEEecchhhhhhcC-CC-CccEEEecccCCcceecCCCeEEecC
Confidence            57999999999888  457889999999999999976432 23 78999844     6799999999854

>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A

Probab=98.01  E-value=7.7e-06  Score=55.21  Aligned_cols=58  Identities=16%  Similarity=0.402  Sum_probs=49.1

Q ss_pred             cccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcC-----CeeeCCCCcee
Q psy14531         93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTET-----GRWSRAPPRCK  154 (222)
Q Consensus        93 ~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~-----g~Ws~~~p~C~  154 (222)
                      .+.|+.|+..+|..+.    ...|..|++++|.|+.||+-.  ++..+.|..+     ..|+.+...|+
T Consensus         5 ~~~C~~Pp~~EHad~r----v~~y~v~s~vRYqC~~Gykrkagtsali~Ck~~~~~g~~~WT~P~LkCI   69 (107)
T 2z3q_B            5 SITCPPPMSVEHADIW----VKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPSLKCI   69 (107)
T ss_dssp             CCBCCCCCCCTTEECC----CSCCBTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEE
T ss_pred             CccCCCCCCcccccce----eEEeccCCEEEEecchhhhhhcCCCCccEEEecccCCcceecCCCeEEe
Confidence            4789999999998873    688999999999999999654  4578899744     58999899998

>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1

Probab=97.79  E-value=3.5e-05  Score=64.07  Aligned_cols=58  Identities=21%  Similarity=0.456  Sum_probs=47.0

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCe-EeCC--CceEeCCCCeeeC-----CCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQ-LKGP--PDIVCQKNGSWSG-----AIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~-l~G~--~~~~C~~~g~W~~-----~~p~C~~   81 (222)
                      +.|..|+. +||.+.. .....+++.++|+|+.+|+ |.+.  ..++|..+|.|..     ..|.|.+
T Consensus         2 v~C~~p~~~~~g~~~~-~~~~~~~s~~~~~C~~~yy~~~~~~~~~~~C~~~g~w~~~~~~~~~~~c~~   68 (333)
T 1elv_A            2 LDCGIPESIENGKVED-PESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCVP   68 (333)
T ss_dssp             CBCCSCCCCTTEEECC-CSCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCCEEE
T ss_pred             CCCCCCCcccCCceec-CCCCccceeEEEECCCCeEeeecCCCceEEECCCCeEcccccccccccccC
Confidence            57999888 9999873 3467889999999999964 5554  6899999999986     6789987

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=97.58  E-value=0.00013  Score=61.04  Aligned_cols=59  Identities=24%  Similarity=0.589  Sum_probs=47.0

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCCeeeCC-----CCceeecCCCCCCC
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWSRA-----PPRCKARCEYPGEP  163 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g~Ws~~-----~p~C~~~C~~p~~~  163 (222)
                      ..|+.|+..+||.+.           ..++|.|+..|.+.  ++..++|.++|+|++.     .|.|++.|+.|..+
T Consensus        31 ~~c~~p~~~~~g~~~-----------~~i~y~C~~~y~~~~~~~~~~~c~~~g~w~~~~~~~~lp~C~p~CG~p~~~   96 (347)
T 4f4o_C           31 DSCPKPPEIPKGYVE-----------HMVRYHCQTYYKLRTAGDGVYTLDSNKQWTNKVTGEKLPECEAVCGKPKNP   96 (347)
T ss_dssp             --CCCCCCBTTEEEE-----------EEEEEEECTTEEEECSSCSEEEECTTSCEEBTTTBTCCCEEEECCSCCSSC
T ss_pred             CcCCCCCCCCCceec-----------eeeEEcCCCccEeccCCCCCEEECCCCCEeCCCCCccCCCccCCCCCCCCC
Confidence            468888888899864           24799999999875  6678999999999863     48999999988654

>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}

Probab=97.27  E-value=0.00045  Score=57.84  Aligned_cols=58  Identities=29%  Similarity=0.605  Sum_probs=45.2

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEe--CCCceEeCCCCeeeCC-----CCceeccceeeeecccccc
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLK--GPPDIVCQKNGSWSGA-----IPECNAFFFFFFFFFFNPV   94 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~--G~~~~~C~~~g~W~~~-----~p~C~~~~~~~~~~~~~~~   94 (222)
                      ..|+.|+. +||++..         .++|+|++.|+|.  |+...+|.++|+|+..     .|.|++             
T Consensus        31 ~~c~~p~~~~~g~~~~---------~i~y~C~~~y~~~~~~~~~~~c~~~g~w~~~~~~~~lp~C~p-------------   88 (347)
T 4f4o_C           31 DSCPKPPEIPKGYVEH---------MVRYHCQTYYKLRTAGDGVYTLDSNKQWTNKVTGEKLPECEA-------------   88 (347)
T ss_dssp             --CCCCCCBTTEEEEE---------EEEEEECTTEEEECSSCSEEEECTTSCEEBTTTBTCCCEEEE-------------
T ss_pred             CcCCCCCCCCCceece---------eeEEcCCCccEeccCCCCCEEECCCCCEeCCCCCccCCCccC-------------
Confidence            46888887 9998752         4899999999884  6678999999999854     589998             


Q ss_pred             cCCCCCCC
Q psy14531         95 HCPVPALP  102 (222)
Q Consensus        95 ~C~~p~~~  102 (222)
                      .|..|..+
T Consensus        89 ~CG~p~~~   96 (347)
T 4f4o_C           89 VCGKPKNP   96 (347)
T ss_dssp             CCSCCSSC
T ss_pred             CCCCCCCC
Confidence            69876554

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=97.19  E-value=0.0017  Score=53.83  Aligned_cols=67  Identities=27%  Similarity=0.495  Sum_probs=53.0

Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC-EEcCC--------CeEEeCcCCeeeCC-----CCceeecCCCC
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH-HLLGE--------ETIVCTETGRWSRA-----PPRCKARCEYP  160 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy-~~~g~--------~~~~C~~~g~Ws~~-----~p~C~~~C~~p  160 (222)
                      .|..|..+.||.+..........++++++|.|...| .+.+.        ..++|..+|.|...     .|.|...|+.+
T Consensus         1 ~c~~p~~~~~g~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~~~~~c~~~CG~~   80 (329)
T 1md8_A            1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCGKP   80 (329)
T ss_dssp             CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEEECCSCC
T ss_pred             CCCCCCCcCCCceeeecCCCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCccccCCCCCCCCCC
Confidence            388899999998775544566788999999999976 45543        57899999999753     57899899986


Q ss_pred             C
Q psy14531        161 G  161 (222)
Q Consensus       161 ~  161 (222)
                      .
T Consensus        81 ~   81 (329)
T 1md8_A           81 V   81 (329)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*

Probab=96.08  E-value=0.017  Score=47.74  Aligned_cols=58  Identities=22%  Similarity=0.465  Sum_probs=44.7

Q ss_pred             eCCCCcc-CCCeEEecc--CCcccccEEEEEcCCCC-eEeCC--------CceEeCCCCeeeCC-----CCceec
Q psy14531         24 ICPKIVV-ENPYLTLVE--QNNTYRGHAIFQCSWGY-QLKGP--------PDIVCQKNGSWSGA-----IPECNA   81 (222)
Q Consensus        24 ~C~~p~~-~ng~~~~~~--~~~~~g~~~~~~C~~gy-~l~G~--------~~~~C~~~g~W~~~-----~p~C~~   81 (222)
                      .|..|.. +||.+....  ..+.+++.+.|+|+..| .|.+.        ...+|..+|.|...     .|.|..
T Consensus         1 ~c~~p~~~~~g~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~~~~~c~~   75 (329)
T 1md8_A            1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLP   75 (329)
T ss_dssp             CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEEE
T ss_pred             CCCCCCCcCCCceeeecCCCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCccccCCCCC
Confidence            3888887 999887543  45788999999999876 46543        57899999999753     578887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d2ok5a2	62	g.18.1.1 (A:138-199) Complement factor B {Human (H	5e-14
d2ok5a2	62	g.18.1.1 (A:138-199) Complement factor B {Human (H	4e-08
d2ok5a2	62	g.18.1.1 (A:138-199) Complement factor B {Human (H	2e-07
d2ok5a3	61	g.18.1.1 (A:77-137) Complement factor B {Human (Ho	3e-13
d2ok5a3	61	g.18.1.1 (A:77-137) Complement factor B {Human (Ho	1e-09
d2ok5a3	61	g.18.1.1 (A:77-137) Complement factor B {Human (Ho	1e-09
d1quba4	60	g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (	4e-12
d1quba4	60	g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (	3e-07
d1quba4	60	g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (	2e-06
d1quba2	58	g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (H	3e-11
d1quba2	58	g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (H	1e-07
d1quba2	58	g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (H	1e-07
d1g40a4	59	g.18.1.1 (A:185-243) Complement control protein {V	4e-11
d1g40a4	59	g.18.1.1 (A:185-243) Complement control protein {V	6e-10
d1g40a4	59	g.18.1.1 (A:185-243) Complement control protein {V	7e-07
d1ly2a2	63	g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Hu	7e-11
d1ly2a2	63	g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Hu	3e-09
d1ly2a2	63	g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Hu	6e-06
d2o39c2	64	g.18.1.1 (C:63-126) CD46 (membrane cofactor protei	1e-10
d2o39c2	64	g.18.1.1 (C:63-126) CD46 (membrane cofactor protei	9e-08
d2o39c2	64	g.18.1.1 (C:63-126) CD46 (membrane cofactor protei	6e-07
d1h03p2	63	g.18.1.1 (P:67-129) Complement decay-accelerating	2e-10
d1h03p2	63	g.18.1.1 (P:67-129) Complement decay-accelerating	5e-08
d1h03p2	63	g.18.1.1 (P:67-129) Complement decay-accelerating	1e-07
d1ly2a1	67	g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Huma	4e-10
d1ly2a1	67	g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Huma	2e-09
d1ly2a1	67	g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Huma	1e-06
d1g40a2	62	g.18.1.1 (A:65-126) Complement control protein {Va	6e-10
d1g40a2	62	g.18.1.1 (A:65-126) Complement control protein {Va	3e-08
d1g40a2	62	g.18.1.1 (A:65-126) Complement control protein {Va	8e-07
d1h03p1	62	g.18.1.1 (P:5-66) Complement decay-accelerating fa	1e-09
d1h03p1	62	g.18.1.1 (P:5-66) Complement decay-accelerating fa	9e-07
d1h03p1	62	g.18.1.1 (P:5-66) Complement decay-accelerating fa	3e-05
d1quba1	62	g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Hom	2e-09
d1quba1	62	g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Hom	7e-07
d1quba1	62	g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Hom	2e-05
d1g40a3	58	g.18.1.1 (A:127-184) Complement control protein {V	2e-09
d1g40a3	58	g.18.1.1 (A:127-184) Complement control protein {V	8e-07
d1g40a3	58	g.18.1.1 (A:127-184) Complement control protein {V	2e-05
d1hfia_	62	g.18.1.1 (A:) Factor H, 15th and 16th modules {Hum	3e-09
d1hfia_	62	g.18.1.1 (A:) Factor H, 15th and 16th modules {Hum	9e-05
d1hfia_	62	g.18.1.1 (A:) Factor H, 15th and 16th modules {Hum	6e-04
d1quba3	63	g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (	4e-09
d1quba3	63	g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (	2e-05
d1quba3	63	g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (	3e-05
d1srza_	68	g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norve	6e-09
d1srza_	68	g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norve	2e-06
d1srza_	68	g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norve	0.001
d1ppqa_	68	g.18.1.1 (A:) Complement receptor 1, cr1 {Human (H	8e-09
d1ppqa_	68	g.18.1.1 (A:) Complement receptor 1, cr1 {Human (H	8e-06
d1ppqa_	68	g.18.1.1 (A:) Complement receptor 1, cr1 {Human (H	2e-05
d1hcca_	59	g.18.1.1 (A:) Factor H, 15th and 16th modules {Hum	9e-09
d1hcca_	59	g.18.1.1 (A:) Factor H, 15th and 16th modules {Hum	9e-07
d1hcca_	59	g.18.1.1 (A:) Factor H, 15th and 16th modules {Hum	8e-06
d1gpza2	68	g.18.1.1 (A:290-357) Complement C1R protease domai	2e-08
d1gpza2	68	g.18.1.1 (A:290-357) Complement C1R protease domai	7e-08
d1gpza2	68	g.18.1.1 (A:290-357) Complement C1R protease domai	1e-04
d1zjka2	53	g.18.1.1 (A:311-363) Complement C1R protease domai	3e-07
d1zjka2	53	g.18.1.1 (A:311-363) Complement C1R protease domai	4e-06
d1zjka2	53	g.18.1.1 (A:311-363) Complement C1R protease domai	1e-05
d1gkna1	64	g.18.1.1 (A:897-960) Complement receptor 1, cr1 {H	4e-07
d1gkna1	64	g.18.1.1 (A:897-960) Complement receptor 1, cr1 {H	3e-05
d1ok3a2	64	g.18.1.1 (A:65-128) Complement decay-accelerating	1e-06
d1ok3a2	64	g.18.1.1 (A:65-128) Complement decay-accelerating	3e-05
d1ok3a1	64	g.18.1.1 (A:1-64) Complement decay-accelerating fa	3e-06
d1ok3a1	64	g.18.1.1 (A:1-64) Complement decay-accelerating fa	8e-06
d2o39c1	62	g.18.1.1 (C:1-62) CD46 (membrane cofactor protein,	6e-06
d2o39c1	62	g.18.1.1 (C:1-62) CD46 (membrane cofactor protein,	2e-04
d1gkga2	70	g.18.1.1 (A:1023-1092) Complement receptor 1, cr1	7e-06
d1gkga2	70	g.18.1.1 (A:1023-1092) Complement receptor 1, cr1	8e-05
d1q3xa2	75	g.18.1.1 (A:366-440) Mannan-binding lectin serine	8e-06
d1q3xa2	75	g.18.1.1 (A:366-440) Mannan-binding lectin serine	2e-04
d1md8a2	76	g.18.1.1 (A:358-433) Complement C1R protease domai	2e-05
d1md8a2	76	g.18.1.1 (A:358-433) Complement C1R protease domai	7e-05
d1elva2	68	g.18.1.1 (A:342-409) Complement C1S protease domai	3e-04
d1elva2	68	g.18.1.1 (A:342-409) Complement C1S protease domai	0.001
d2z3qb1	78	g.18.1.1 (B:1-78) Interleukin-15 receptor subunit	5e-04
d2z3qb1	78	g.18.1.1 (B:1-78) Interleukin-15 receptor subunit	6e-04

>d2ok5a2 g.18.1.1 (A:138-199) Complement factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (151), Expect = 5e-14
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 95  HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
           +C  P +P+         G  YR+   + + C+    L G +   C E G WS   P C+
Sbjct: 2   YCSNPGIPIGTRK----VGSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQ 57

Query: 155 ARCEY 159
               Y
Sbjct: 58  DSFMY 62

>d2ok5a2 g.18.1.1 (A:138-199) Complement factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (110), Expect = 4e-08
 Identities = 15/46 (32%), Positives = 19/46 (41%)

Query: 40 QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNAFFFF 85
                    + CS G  L+G     CQ+ GSWSG  P C   F +
Sbjct: 17 SQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMY 62

>d2ok5a2 g.18.1.1 (A:138-199) Complement factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (106), Expect = 2e-07
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 6/60 (10%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C  PG P   + +  ++     D +   C+ G    L  +      CQ  G+WS   P C
Sbjct: 3   CSNPGIPIGTRKVGSQYRL--EDSVTYHCSRGLT--LRGSQRR--TCQEGGSWSGTEPSC 56

>d2ok5a3 g.18.1.1 (A:77-137) Complement factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (146), Expect = 3e-13
 Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 95  HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK 154
           HCP P    NG     P    Y V   + F C D + L G     C   GRWS     C 
Sbjct: 1   HCPRPHDFENGEYW--PRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICD 58

>d2ok5a3 g.18.1.1 (A:77-137) Complement factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (121), Expect = 1e-09
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C  P + +NG+  P   +Y+  D I   C DGY     +  ++   CQ +G WS     C
Sbjct: 2   CPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYT----LRGSANRTCQVNGRWSGQTAIC 57

Query: 217 TN 218
            N
Sbjct: 58  DN 59

>d2ok5a3 g.18.1.1 (A:77-137) Complement factor B {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (121), Expect = 1e-09
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN 80
          CP+    EN                 F C  GY L+G  +  CQ NG WSG    C+
Sbjct: 2  CPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICD 58

>d1quba4 g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 4e-12
 Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           V CP P+ P NG  +  P            F C+D + L G E I CT+ G WS A P C
Sbjct: 1   VKCPFPSRPDNGF-VNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWS-AMPSC 58

Query: 154 KA 155
           KA
Sbjct: 59  KA 60

>d1quba4 g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 3e-07
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 23 IICPKI-VVENPYLTLVEQN-NTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN 80
          + CP     +N ++    +    Y+  A F C  GY L GP +I C K G+WS   P C 
Sbjct: 1  VKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAM-PSCK 59

Query: 81 A 81
          A
Sbjct: 60 A 60

>d1quba4 g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 2e-06
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 156 RCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIP 214
           +C +P  P NG +  P K      D     C+DGY     +       C   G WS  +P
Sbjct: 2   KCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYS----LDGPEEIECTKLGNWS-AMP 56

Query: 215 HC 216
            C
Sbjct: 57  SC 58

>d1quba2 g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 3e-11
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           CP   +  NG +        +     + F+CN   +L G ++  CTE G+WS   P C
Sbjct: 3   CPFAGILENGAV----RYTTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVC 56

>d1quba2 g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (107), Expect = 1e-07
 Identities = 12/40 (30%), Positives = 16/40 (40%)

Query: 40 QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
              Y     F C+ G+ L G     C + G WS  +P C
Sbjct: 17 TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVC 56

>d1quba2 g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (107), Expect = 1e-07
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
            C + G  +NG +    F Y   + I  +CN G+     +       C  +G WS ++P 
Sbjct: 2   VCPFAGILENGAVRYTTFEY--PNTISFSCNTGFY----LNGADSAKCTEEGKWSPELPV 55

Query: 216 CT 217
           C 
Sbjct: 56  CA 57

>d1g40a4 g.18.1.1 (A:185-243) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 59

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 54.6 bits (131), Expect = 4e-11
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           V CP P +  NG+L        Y     + F C   + L G  +  C+    W    P+C
Sbjct: 1   VKCPHPTIS-NGYLS-SGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKC 58

>d1g40a4 g.18.1.1 (A:185-243) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 59

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 51.5 bits (123), Expect = 6e-10
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 23 IICPKIVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
          + CP   + N YL+   + + +Y  +  F+C +GY+L G     C    +W   +P+C
Sbjct: 1  VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKC 58

>d1g40a4 g.18.1.1 (A:185-243) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 59

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 43.0 bits (101), Expect = 7e-07
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
           +C +P           K  Y   D++   C  GY     ++ +S   C    TW  ++P 
Sbjct: 2   KCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYK----LSGSSSSTCSPGNTWKPELPK 57

Query: 216 C 216
           C
Sbjct: 58  C 58

>d1ly2a2 g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 7e-11
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAP-PR 152
             CP P +P    +       PYR G  + FAC     + G +++ C     W     P 
Sbjct: 3   SSCPEPIVPGGYKI---RGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPT 59

Query: 153 CKA 155
           C +
Sbjct: 60  CVS 62

>d1ly2a2 g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 3e-09
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 25 CPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGA-IPECNA 81
          CP+ +V   Y         +     F C   + + G   + CQ N  W    +P C +
Sbjct: 5  CPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVS 62

>d1ly2a2 g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 6e-06
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 6/62 (9%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD-IPH 215
           C  P  P  G  I     Y  GD +   C   +     +      +CQ++  W    +P 
Sbjct: 5   CPEPIVP-GGYKIRGSTPYRHGDSVTFACKTNFS----MNGNKSVWCQANNMWGPTRLPT 59

Query: 216 CT 217
           C 
Sbjct: 60  CV 61

>d2o39c2 g.18.1.1 (C:63-126) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 1e-10
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPR 152
           CP    PLNG  +  P  G Y  G  + F CN+ ++L+GEE + C   G    WS  PP 
Sbjct: 3   CPYIRDPLNGQAV--PANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPI 60

Query: 153 CKA 155
           C+ 
Sbjct: 61  CEK 63

>d2o39c2 g.18.1.1 (C:63-126) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 9e-08
 Identities = 18/61 (29%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 25 CPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIPECN 80
          CP I    N           +     F C+ GY L G   + C+  GS   WSG  P C 
Sbjct: 3  CPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICE 62

Query: 81 A 81
           
Sbjct: 63 K 63

>d2o39c2 g.18.1.1 (C:63-126) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 6e-07
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDI 213
           C Y  +P NG+ +P    Y+ G  +   CN+GY     +      YC+  G+   WS   
Sbjct: 3   CPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYY----LIGEEILYCELKGSVAIWSGKP 58

Query: 214 PHCT 217
           P C 
Sbjct: 59  PICE 62

>d1h03p2 g.18.1.1 (P:67-129) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 2e-10
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT---ETGRWSRAP 150
           ++CP P    NG +        Y     + +ACN    ++GE +I CT   + G WS  P
Sbjct: 1   IYCPAPPQIDNGIIQ--GERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPP 58

Query: 151 PRCK 154
           P C+
Sbjct: 59  PECR 62

>d1h03p2 g.18.1.1 (P:67-129) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (109), Expect = 5e-08
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 1/61 (1%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
            C  P +  NG I   +  Y     +   CN G+    + +         +G WS   P 
Sbjct: 2   YCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTV-NNDEGEWSGPPPE 60

Query: 216 C 216
           C
Sbjct: 61  C 61

>d1h03p2 g.18.1.1 (P:67-129) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 1e-07
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 23 IICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC---QKNGSWSGAIPE 78
          I CP    ++N  +     +  YR    + C+ G+ + G   I C      G WSG  PE
Sbjct: 1  IYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPE 60

Query: 79 C 79
          C
Sbjct: 61 C 61

>d1ly2a1 g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 4e-10
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT----ETGRWSRA 149
             C  P   LNG +       P  VG +++++C+    L+GE++++C       G W + 
Sbjct: 2   ASCGSPPPILNGRIS--YYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP 59

Query: 150 PPRCKA 155
            P+C+ 
Sbjct: 60  APKCEY 65

>d1ly2a1 g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 2e-09
 Identities = 15/63 (23%), Positives = 24/63 (38%)

Query: 154 KARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDI 213
           +A C  P    NG+I         G  I+ +C+  +    + +       + DGTW    
Sbjct: 1   EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60

Query: 214 PHC 216
           P C
Sbjct: 61  PKC 63

>d1ly2a1 g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 1e-06
 Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 5/65 (7%)

Query: 22 QIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAI 76
          +  C     + N  ++             + CS  ++L G   ++C    + +G+W    
Sbjct: 1  EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60

Query: 77 PECNA 81
          P+C  
Sbjct: 61 PKCEY 65

>d1g40a2 g.18.1.1 (A:65-126) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 51.5 bits (123), Expect = 6e-10
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCT----ETGRWSRAPP 151
           CP P    NG L      G    G+ + ++CN  +HL+GE    C      +  W+   P
Sbjct: 3   CPSPRDIDNGQL----DIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAP 58

Query: 152 RCKA 155
            C++
Sbjct: 59  ICES 62

>d1g40a2 g.18.1.1 (A:65-126) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 46.9 bits (111), Expect = 3e-08
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
           RC  P +  NG++      +  G  I  +CN GY    +              W+ + P 
Sbjct: 2   RCPSPRDIDNGQLDIGGVDF--GSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPI 59

Query: 216 C 216
           C
Sbjct: 60  C 60

>d1g40a2 g.18.1.1 (A:65-126) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 43.1 bits (101), Expect = 8e-07
 Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 4/45 (8%)

Query: 41 NNTYRGHAIFQCSWGYQLKGPPDIVCQ----KNGSWSGAIPECNA 81
             +     + C+ GY L G     C+     +  W+   P C +
Sbjct: 18 GVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICES 62

>d1h03p1 g.18.1.1 (P:5-66) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (121), Expect = 1e-09
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRAPPR 152
           CP P    NG +      G    GA + F+CN  + L G  +  C  +G   +WS   P 
Sbjct: 3   CPNPGEIRNGQID---VPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPE 59

Query: 153 CK 154
           C+
Sbjct: 60  CR 61

>d1h03p1 g.18.1.1 (P:5-66) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (100), Expect = 9e-07
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 41 NNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIPEC 79
             +     F C+ GY+L G     C  +GS   WS  +PEC
Sbjct: 19 GILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC 60

>d1h03p1 g.18.1.1 (P:5-66) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 3e-05
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLD 212
            C  PGE +NG+I         G  I  +CN GY   L  + +S  +C   G+   WS  
Sbjct: 2   SCPNPGEIRNGQIDVPGGIL-FGATISFSCNTGYK--LFGSTSS--FCLISGSSVQWSDP 56

Query: 213 IPHC 216
           +P C
Sbjct: 57  LPEC 60

>d1quba1 g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-09
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C  P +     ++PLK FY+PG+ I  +C  GYV            C   G W ++   C
Sbjct: 4   CPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVS---RGGMRKFICPLTGLWPINTLKC 60

Query: 217 T 217
           T
Sbjct: 61  T 61

>d1quba1 g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 7e-07
 Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 3/59 (5%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL-GEETIVCTETGRWSRAPPRC 153
           CP P       ++  P    Y  G  + ++C   +    G    +C  TG W     +C
Sbjct: 4   CPKPDDLPFSTVV--PLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKC 60

>d1quba1 g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-05
 Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 2/58 (3%)

Query: 24 ICPK-IVVENPYLTLVEQNNTYRGHAIFQCSWGYQL-KGPPDIVCQKNGSWSGAIPEC 79
           CPK   +    +  ++          + C  GY    G    +C   G W     +C
Sbjct: 3  TCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKC 60

>d1g40a3 g.18.1.1 (A:127-184) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 58

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 49.9 bits (119), Expect = 2e-09
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
           V C  P    NG          Y  G+++ ++CN  + L+G   ++C+  G WS  PP C
Sbjct: 1   VKCQSPPSISNGRHN--GYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWS-DPPTC 56

Query: 154 K 154
           +
Sbjct: 57  Q 57

>d1g40a3 g.18.1.1 (A:127-184) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 58

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 43.0 bits (101), Expect = 8e-07
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
           +C+ P    NG+    + FY  G  +  +CN GY     +   SG  C   G WS D P 
Sbjct: 2   KCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYS----LIGNSGVLCS-GGEWS-DPPT 55

Query: 216 C 216
           C
Sbjct: 56  C 56

>d1g40a3 g.18.1.1 (A:127-184) Complement control protein {Vaccinia virus [TaxId: 10245]} Length = 58

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

 Score = 38.7 bits (90), Expect = 2e-05
 Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 23 IICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
          + C     + N      E   T      + C+ GY L G   ++C   G WS   P C
Sbjct: 1  VKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCS-GGEWSDP-PTC 56

>d1hfia_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 3e-09
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 93  PVHCPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPP 151
            + C  P    +G +     +   Y  G  L + C     +  E    C   G+WS +PP
Sbjct: 2   KIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCYM-GKWS-SPP 59

Query: 152 RCK 154
           +C+
Sbjct: 60  QCE 62

>d1hfia_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 9e-05
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 9/66 (13%)

Query: 154 KARCEYPGEPQNGKII---PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
           K  C  P + ++G I      +  Y  G  +  TC  G+     I+  +   C   G WS
Sbjct: 2   KIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFR----ISEENETTCY-MGKWS 56

Query: 211 LDIPHC 216
              P C
Sbjct: 57  -SPPQC 61

>d1hfia_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 6e-04
 Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 21 QQIICPKI-VVENPYLT---LVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAI 76
          ++I C +   +E+  +      +++  +     + C  G+++    +  C   G WS   
Sbjct: 1  EKIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCY-MGKWSSP- 58

Query: 77 PEC 79
          P+C
Sbjct: 59 PQC 61

>d1quba3 g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 4e-09
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 94  VHCPVPALPLNGHLIED--PTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPP 151
           + CP P++P    L       G          F C  +H + G +TI CT  G W+   P
Sbjct: 1   IICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT-KLP 59

Query: 152 RCK 154
            C+
Sbjct: 60  ECR 62

>d1quba3 g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 2e-05
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 9/65 (13%)

Query: 156 RCEYPGEPQNGKIIPLKFF----YDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL 211
            C  P  P    +   K          D     C   +     +       C + G W+ 
Sbjct: 2   ICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHA----MFGNDTITCTTHGNWT- 56

Query: 212 DIPHC 216
            +P C
Sbjct: 57  KLPEC 61

>d1quba3 g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 3e-05
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 19 TCQQIICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPE 78
           C     P       Y      N+ YR  A+F+C   + + G   I C  +G+W+  +PE
Sbjct: 2  ICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LPE 60

Query: 79 C 79
          C
Sbjct: 61 C 61

>d1srza_ g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: GABA-B receptor 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.8 bits (116), Expect = 6e-09
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 90  FFNPVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRA 149
            F  +         NG +       P   GA ++F C+   HL+G    VC+  G+WS  
Sbjct: 3   EFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTP 61

Query: 150 PPRCKA 155
            P C+ 
Sbjct: 62  KPHCQV 67

>d1srza_ g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: GABA-B receptor 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.8 bits (98), Expect = 2e-06
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 24 ICPK--IVVENPYLTLVEQNNTYR--GHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
          IC K  + +EN  + L   +          F+C   + L G    VC   G WS   P C
Sbjct: 7  ICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHC 65

>d1srza_ g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: GABA-B receptor 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.1 bits (78), Expect = 0.001
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 7/62 (11%)

Query: 157 CEYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIP 214
            +     +NGK+           G  ++  C+  +     +  +S   C   G WS   P
Sbjct: 9   SKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFH----LVGSSRSVCS-QGQWSTPKP 63

Query: 215 HC 216
           HC
Sbjct: 64  HC 65

>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 8e-09
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 6/66 (9%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETG---RWSRA 149
              C  P  P+NG +         +VG+ + ++C   H L+G  +  C  +G    WS  
Sbjct: 4   AKSCKTPPDPVNGMVH---VITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60

Query: 150 PPRCKA 155
           PP C+ 
Sbjct: 61  PPICQR 66

>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 8e-06
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 9/69 (13%)

Query: 153 CKAR-CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---T 208
            +A+ C+ P +P NG +  +      G  I  +C  G+     +   S   C   G    
Sbjct: 2   AEAKSCKTPPDPVNGMVHVITDIQ-VGSRITYSCTTGHR----LIGHSSAECILSGNTAH 56

Query: 209 WSLDIPHCT 217
           WS   P C 
Sbjct: 57  WSTKPPICQ 65

>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 2e-05
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 5/66 (7%)

Query: 20 CQQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGA 75
           +   C       N  +  V  +        + C+ G++L G     C  +G+   WS  
Sbjct: 2  AEAKSCKTPPDPVNGMVH-VITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60

Query: 76 IPECNA 81
           P C  
Sbjct: 61 PPICQR 66

>d1hcca_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]} Length = 59

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (114), Expect = 9e-09
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 93  PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPR 152
            + C  P    +G +        Y+ G  + + C +   + G     C    +WS  PP 
Sbjct: 2   GLPCKSPPEISHGVVA--HMSDSYQYGEEVTYKCFEGFGIDGPAIAKCLG-EKWS-HPPS 57

Query: 153 C 153
           C
Sbjct: 58  C 58

>d1hcca_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]} Length = 59

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (100), Expect = 9e-07
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
            C+ P E  +G +  +   Y  G+ +   C +G+     I   +   C     WS   P 
Sbjct: 4   PCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFG----IDGPAIAKCL-GEKWS-HPPS 57

Query: 216 C 216
           C
Sbjct: 58  C 58

>d1hcca_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]} Length = 59

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (93), Expect = 8e-06
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 21 QQIICPKI-VVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPEC 79
          + + C     + +  +  +  +  Y     ++C  G+ + GP    C     WS   P C
Sbjct: 1  EGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCL-GEKWSHP-PSC 58

>d1gpza2 g.18.1.1 (A:290-357) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 156 RCEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVK--PLDITPTSGPYCQSDGTWSLD 212
           +C  P       II  L+  Y   D+   TC  GY       +  +    CQ DGTW   
Sbjct: 2   KCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRA 61

Query: 213 IPHC 216
           +P C
Sbjct: 62  MPRC 65

>d1gpza2 g.18.1.1 (A:290-357) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 7e-08
 Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND------RHHLLGEETIVCTETGRWS 147
           + CP P       +I+      Y+        C         + +L   T VC + G W 
Sbjct: 1   IKCPQPKTLDEFTIIQ-NLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWH 59

Query: 148 RAPPRCK 154
           RA PRCK
Sbjct: 60  RAMPRCK 66

>d1gpza2 g.18.1.1 (A:290-357) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 1e-04
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 23 IICPK-IVVENPYLTLVEQNN-TYRGHAIFQCSWGYQLKGPPD------IVCQKNGSWSG 74
          I CP+   ++   +    Q    +R + I  C  GYQL            VCQ +G+W  
Sbjct: 1  IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR 60

Query: 75 AIPEC 79
          A+P C
Sbjct: 61 AMPRC 65

>d1zjka2 g.18.1.1 (A:311-363) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 3e-07
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 168 IIPLKFFYDPGDHIQVTCNDGY--VKPLDITPTSGPYCQSDGTWSLDIPHC 216
           + P++  Y   D   + C  GY  ++      +    CQ DG+W   +P C
Sbjct: 1   VSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPAC 51

>d1zjka2 g.18.1.1 (A:311-363) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 4e-06
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 6/52 (11%)

Query: 35 LTLVEQNNTYRGHAIFQCSWGYQ------LKGPPDIVCQKNGSWSGAIPECN 80
          ++ V+     +      C  GY+             VCQK+GSW   +P C+
Sbjct: 1  VSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACS 52

>d1zjka2 g.18.1.1 (A:311-363) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 1e-05
 Identities = 13/50 (26%), Positives = 15/50 (30%), Gaps = 6/50 (12%)

Query: 111 PTGGPYRVGAILQFACND------RHHLLGEETIVCTETGRWSRAPPRCK 154
           P    Y +       C         H  L   T VC + G W R  P C 
Sbjct: 3   PVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACS 52

>d1gkna1 g.18.1.1 (A:897-960) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 4e-07
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRC 153
            HC  P   L   L    T   + +G  L++ C    +     +I C +   WS     C
Sbjct: 4   AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRP-EYYGRPFSITCLDNLVWSSPKDVC 62

Query: 154 K 154
           K
Sbjct: 63  K 63

>d1gkna1 g.18.1.1 (A:897-960) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 3e-05
 Identities = 11/67 (16%), Positives = 18/67 (26%), Gaps = 7/67 (10%)

Query: 153 CKARCEYPGEPQNGKIIPL--KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS 210
            +A C+ P      K+        +  G  ++  C   Y             C  +  WS
Sbjct: 2   AEAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYG-----RPFSITCLDNLVWS 56

Query: 211 LDIPHCT 217
                C 
Sbjct: 57  SPKDVCK 63

>d1ok3a2 g.18.1.1 (A:65-128) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 1e-06
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 96  CPVPALPLNGHLI-EDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET--GRWSRAPPR 152
           C VP    +  L     T   + VG ++++ C   +      +   T     +WS A   
Sbjct: 2   CEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEF 61

Query: 153 CK 154
           CK
Sbjct: 62  CK 63

>d1ok3a2 g.18.1.1 (A:65-128) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 3e-05
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 5/64 (7%)

Query: 157 CEYPGEPQNGKIIP---LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDI 213
           CE P    +  +      + ++  G  ++  C  GY +   ++P     C  +  WS  +
Sbjct: 2   CEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKL--TCLQNLKWSTAV 59

Query: 214 PHCT 217
             C 
Sbjct: 60  EFCK 63

>d1ok3a1 g.18.1.1 (A:1-64) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 3e-06
 Identities = 10/62 (16%), Positives = 16/62 (25%), Gaps = 3/62 (4%)

Query: 157 CEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
           C  P +  N +     +  +     I   C + +V            C     WS     
Sbjct: 4   CGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFV--KIPGEKDSVICLKGSQWSDIEEF 61

Query: 216 CT 217
           C 
Sbjct: 62  CN 63

>d1ok3a1 g.18.1.1 (A:1-64) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 8e-06
 Identities = 8/61 (13%), Positives = 16/61 (26%), Gaps = 3/61 (4%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTET--GRWSRAPPRC 153
           C +P    N           +    ++ + C +    +  E          +WS     C
Sbjct: 4   CGLPPDVPNAQPAL-EGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 62

Query: 154 K 154
            
Sbjct: 63  N 63

>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 6e-06
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 157 CEYPGEPQNGKII-PLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWS-LDIP 214
           CE P   +  ++I   K +Y+ G+ +   C  GY     +   +   C  + TW  +   
Sbjct: 1   CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHT--ICDRNHTWLPVSDD 58

Query: 215 HCT 217
            C 
Sbjct: 59  ACY 61

>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 6/65 (9%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE--TIVCTETGRWSRAPPRC 153
           C  P       LI       Y +G  + + C   +  +       +C     W    P  
Sbjct: 1   CEEPPTFEAMELIG-KPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWL---PVS 56

Query: 154 KARCE 158
              C 
Sbjct: 57  DDACY 61

>d1gkga2 g.18.1.1 (A:1023-1092) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]} Length = 70

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 7e-06
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 11/70 (15%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND------RHHLLGEETIVCT----ET 143
           + C +P    NG  I       +  G+++ + CN          L+GE +I CT    + 
Sbjct: 1   IPCGLPPTIANGDFI-STNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQV 59

Query: 144 GRWSRAPPRC 153
           G WS   P+C
Sbjct: 60  GIWSGPAPQC 69

>d1gkga2 g.18.1.1 (A:1023-1092) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]} Length = 70

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 8e-05
 Identities = 14/67 (20%), Positives = 18/67 (26%), Gaps = 7/67 (10%)

Query: 157 CEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDI------TPTSGPYCQSDGTW 209
           C  P    NG  I   +  +  G  +   CN G             +          G W
Sbjct: 3   CGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIW 62

Query: 210 SLDIPHC 216
           S   P C
Sbjct: 63  SGPAPQC 69

>d1q3xa2 g.18.1.1 (A:366-440) Mannan-binding lectin serine protease 2 (MASP-2) domains {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Mannan-binding lectin serine protease 2 (MASP-2) domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 8e-06
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACND--RHHLLGEETIVCTETGRWSRA---- 149
           C  P    +G +      G     A++Q++C +      + +   VC   G W+ +    
Sbjct: 1   CGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEK 60

Query: 150 -PPRCKARCEYPGE 162
             P C+  C     
Sbjct: 61  SLPVCEPVCGLSAR 74

>d1q3xa2 g.18.1.1 (A:366-440) Mannan-binding lectin serine protease 2 (MASP-2) domains {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Mannan-binding lectin serine protease 2 (MASP-2) domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 2e-04
 Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 157 CEYPGEPQNGKIIPLKF--FYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIP 214
           C  P +  +G++  +           IQ +C + +             C++DG W+    
Sbjct: 1   CGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMK--VNDGKYVCEADGFWTSSKG 58

Query: 215 HCT 217
             +
Sbjct: 59  EKS 61

>d1md8a2 g.18.1.1 (A:358-433) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 2e-05
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 10/73 (13%)

Query: 96  CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH---------LLGEETIVCTETGRW 146
           C  P    NG      T G     A +Q+ C++ ++            +    CT  G W
Sbjct: 2   CGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIW 61

Query: 147 SRAPPRCKA-RCE 158
                  K  RC 
Sbjct: 62  KNEQKGEKIPRCL 74

>d1md8a2 g.18.1.1 (A:358-433) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 7e-05
 Identities = 12/68 (17%), Positives = 17/68 (25%), Gaps = 7/68 (10%)

Query: 157 CEYPGEPQNGKIIPLKFF--YDPGDHIQVTCNDGYVKP-----LDITPTSGPYCQSDGTW 209
           C  P    NG                IQ  C++ Y K         +      C + G W
Sbjct: 2   CGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIW 61

Query: 210 SLDIPHCT 217
             +     
Sbjct: 62  KNEQKGEK 69

>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1S protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 3e-04
 Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 7/69 (10%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACND---RHHLLGEETIVCTETGRWSRAP 150
           + C +P    NG +           G+++++ C +        G     C   G W    
Sbjct: 1   LDCGIPESIENGKVE---DPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEV 57

Query: 151 PRCKA-RCE 158
              +  +C 
Sbjct: 58  LGPELPKCV 66

>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1S protease domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHC 216
           C  P   +NGK+   +     G  I+ TC + Y   ++       +C  +G+W  ++   
Sbjct: 3   CGIPESIENGKVEDPESTL-FGSVIRYTCEEPYYY-MENGGGGEYHCAGNGSWVNEVLGP 60

Query: 217 T 217
            
Sbjct: 61  E 61

>d2z3qb1 g.18.1.1 (B:1-78) Interleukin-15 receptor subunit alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 78

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-15 receptor subunit alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 5e-04
 Identities = 11/80 (13%), Positives = 22/80 (27%), Gaps = 7/80 (8%)

Query: 94  VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEE--TIVCTETGRWSRAPP 151
           + CP P    +     D     Y + +  ++ CN              C      + A  
Sbjct: 1   ITCPPPMSVEHA----DIWVKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHW 56

Query: 152 RCKA-RCEYPGEPQNGKIIP 170
              + +C       + +  P
Sbjct: 57  TTPSLKCIRDPALVHQRPAP 76

>d2z3qb1 g.18.1.1 (B:1-78) Interleukin-15 receptor subunit alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 78

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-15 receptor subunit alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 6e-04
 Identities = 7/62 (11%), Positives = 18/62 (29%), Gaps = 4/62 (6%)

Query: 156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPH 215
            C  P   ++  I    +        +  CN G+ +    +  +   C  +   ++    
Sbjct: 2   TCPPPMSVEHADIWVKSYSL--YSRERYICNSGFKRKAGTSSLT--ECVLNKATNVAHWT 57

Query: 216 CT 217
             
Sbjct: 58  TP 59

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d2ok5a3	61	Complement factor B {Human (Homo sapiens) [TaxId:	99.52
d1quba2	58	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.52
d2ok5a3	61	Complement factor B {Human (Homo sapiens) [TaxId:	99.51
d1q3xa2	75	Mannan-binding lectin serine protease 2 (MASP-2) d	99.5
d1g40a3	58	Complement control protein {Vaccinia virus [TaxId:	99.5
d1ly2a1	67	Complement receptor 2, cr2 {Human (Homo sapiens) [	99.5
d1quba2	58	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.49
d1ly2a2	63	Complement receptor 2, cr2 {Human (Homo sapiens) [	99.49
d1ly2a1	67	Complement receptor 2, cr2 {Human (Homo sapiens) [	99.49
d1gpza2	68	Complement C1R protease domains {Human (Homo sapie	99.48
d2ok5a2	62	Complement factor B {Human (Homo sapiens) [TaxId:	99.48
d1quba1	62	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.48
d1quba4	60	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.47
d1hcca_	59	Factor H, 15th and 16th modules {Human (Homo sapie	99.46
d1g40a3	58	Complement control protein {Vaccinia virus [TaxId:	99.46
d2o39c2	64	CD46 (membrane cofactor protein, MCP) {Human (Homo	99.46
d1quba3	63	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.46
d1gpza2	68	Complement C1R protease domains {Human (Homo sapie	99.46
d1g40a4	59	Complement control protein {Vaccinia virus [TaxId:	99.45
d2ok5a2	62	Complement factor B {Human (Homo sapiens) [TaxId:	99.45
d1h03p2	63	Complement decay-accelerating factor (Daf, CD55) {	99.45
d1quba4	60	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.45
d2o39c2	64	CD46 (membrane cofactor protein, MCP) {Human (Homo	99.45
d1quba1	62	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.44
d1hfia_	62	Factor H, 15th and 16th modules {Human (Homo sapie	99.43
d1quba3	63	beta2-glycoprotein I {Human (Homo sapiens) [TaxId:	99.43
d1ly2a2	63	Complement receptor 2, cr2 {Human (Homo sapiens) [	99.42
d1md8a2	76	Complement C1R protease domains {Human (Homo sapie	99.41
d1hfia_	62	Factor H, 15th and 16th modules {Human (Homo sapie	99.41
d1ppqa_	68	Complement receptor 1, cr1 {Human (Homo sapiens) [	99.41
d1hcca_	59	Factor H, 15th and 16th modules {Human (Homo sapie	99.4
d1g40a2	62	Complement control protein {Vaccinia virus [TaxId:	99.4
d1h03p2	63	Complement decay-accelerating factor (Daf, CD55) {	99.39
d1g40a2	62	Complement control protein {Vaccinia virus [TaxId:	99.39
d1ok3a2	64	Complement decay-accelerating factor (Daf, CD55) {	99.39
d1gkna1	64	Complement receptor 1, cr1 {Human (Homo sapiens) [	99.38
d1q3xa2	75	Mannan-binding lectin serine protease 2 (MASP-2) d	99.37
d1ok3a2	64	Complement decay-accelerating factor (Daf, CD55) {	99.37
d1md8a2	76	Complement C1R protease domains {Human (Homo sapie	99.37
d1ok3a1	64	Complement decay-accelerating factor (Daf, CD55) {	99.36
d1h03p1	62	Complement decay-accelerating factor (Daf, CD55) {	99.35
d1g40a4	59	Complement control protein {Vaccinia virus [TaxId:	99.35
d1ppqa_	68	Complement receptor 1, cr1 {Human (Homo sapiens) [	99.34
d1elva2	68	Complement C1S protease domain {Human (Homo sapien	99.32
d1gkga2	70	Complement receptor 1, cr1 {Human (Homo sapiens) [	99.32
d1zjka2	53	Complement C1R protease domains {Human (Homo sapie	99.32
d1elva2	68	Complement C1S protease domain {Human (Homo sapien	99.32
d1ok3a1	64	Complement decay-accelerating factor (Daf, CD55) {	99.31
d1gkga2	70	Complement receptor 1, cr1 {Human (Homo sapiens) [	99.31
d1h03p1	62	Complement decay-accelerating factor (Daf, CD55) {	99.3
d2z3qb1	78	Interleukin-15 receptor subunit alpha {Human (Homo	99.28
d2o39c1	62	CD46 (membrane cofactor protein, MCP) {Human (Homo	99.27
d1gkna1	64	Complement receptor 1, cr1 {Human (Homo sapiens) [	99.26
d2z3qb1	78	Interleukin-15 receptor subunit alpha {Human (Homo	99.24
d1zjka2	53	Complement C1R protease domains {Human (Homo sapie	99.24
d2o39c1	62	CD46 (membrane cofactor protein, MCP) {Human (Homo	99.23
d1srza_	68	GABA-B receptor 1 {Rat (Rattus norvegicus) [TaxId:	99.22
d1srza_	68	GABA-B receptor 1 {Rat (Rattus norvegicus) [TaxId:	99.22
d2ok5a4	68	Complement factor B {Human (Homo sapiens) [TaxId:	97.77
d2b5id2	63	Interleukin-2 receptor alpha chain {Human (Homo sa	97.71
d2ok5a4	68	Complement factor B {Human (Homo sapiens) [TaxId:	97.58
d2b5id2	63	Interleukin-2 receptor alpha chain {Human (Homo sa	97.51
d1g40a1	64	Complement control protein {Vaccinia virus [TaxId:	96.69
d1g40a1	64	Complement control protein {Vaccinia virus [TaxId:	95.86
d2b5id1	64	Interleukin-2 receptor alpha chain {Human (Homo sa	95.52
d2b5id1	64	Interleukin-2 receptor alpha chain {Human (Homo sa	93.1
d2joda1	106	Pituitary adenylate cyclase-activating polypeptide	83.97

>d2ok5a3 g.18.1.1 (A:77-137) Complement factor B {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.7e-15  Score=91.66  Aligned_cols=58  Identities=31%  Similarity=0.566  Sum_probs=53.7

Q ss_pred             eCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531         24 ICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        24 ~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      .|+.|+. +||.+......|.+|+.|+|+|+.||.|.|+..++|+.+|+|+.+.|.|+.
T Consensus         1 ~Cp~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~d   59 (61)
T d2ok5a3           1 HCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDN   59 (61)
T ss_dssp             EECCCSCCTTEEEESCCSSEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEEC
T ss_pred             CccCCCCCCCcEEecCCCcccCCCEEEEECCCCCEEeCCCeeEECCCCeECCCCCeecC
Confidence            3888877 999998777779999999999999999999999999999999999999986

>d1quba2 g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.1e-14  Score=89.41  Aligned_cols=56  Identities=29%  Similarity=0.685  Sum_probs=51.5

Q ss_pred             eCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531         24 ICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        24 ~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      .|+.|.. +||.+..  ..+.+|++|+|+|+.||.|.|+..++|+.+|+|+.+.|.|++
T Consensus         2 ~C~~p~~~~nG~~~~--~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~P   58 (58)
T d1quba2           2 VCPFAGILENGAVRY--TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAP   58 (58)
T ss_dssp             BCCCCCCCTTEEEEC--SCSBTTCEEEEEECTTEEEESCSEEEECTTSCEESCCCEEEE
T ss_pred             CCcCCCCCCCcEEEC--CCcccCCEEEEEcCCCCEEcCCCCeEECCCCeECCCCCEeCC
Confidence            5999988 9999875  568899999999999999999999999999999999999974

>d2ok5a3 g.18.1.1 (A:77-137) Complement factor B {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.1e-14  Score=90.33  Aligned_cols=59  Identities=32%  Similarity=0.645  Sum_probs=54.4

Q ss_pred             CCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceeeC
Q psy14531        157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTNY  219 (222)
Q Consensus       157 C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~~  219 (222)
                      |+.|+.+.||.+...+..|..|+.|+|.|++||.+.|+    ..++|+.+|+|++++|.|++.
T Consensus         2 Cp~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~d~   60 (61)
T d2ok5a3           2 CPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGS----ANRTCQVNGRWSGQTAICDNG   60 (61)
T ss_dssp             ECCCSCCTTEEEESCCSSEETTCEEEEEECTTCEEESC----SEEEBCTTSCBSSCCCEEECS
T ss_pred             ccCCCCCCCcEEecCCCcccCCCEEEEECCCCCEEeCC----CeeEECCCCeECCCCCeecCC
Confidence            88899999999998777788899999999999999988    889999999999999999874

>d1q3xa2 g.18.1.1 (A:366-440) Mannan-binding lectin serine protease 2 (MASP-2) domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Mannan-binding lectin serine protease 2 (MASP-2) domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4e-14  Score=91.41  Aligned_cols=66  Identities=21%  Similarity=0.492  Sum_probs=56.2

Q ss_pred             CCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCE--EcCCCeEEeCcCCeeeCC-----CCceeecCCCCC
Q psy14531         96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHH--LLGEETIVCTETGRWSRA-----PPRCKARCEYPG  161 (222)
Q Consensus        96 C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~--~~g~~~~~C~~~g~Ws~~-----~p~C~~~C~~p~  161 (222)
                      |+.|+.+.||.+........|.+|++|+|+|+.||.  +.|+..++|++||+|++.     .|.|+..|+.|.
T Consensus         1 C~~P~~i~nG~~~~~~~~~~~~ygs~v~Y~C~~Gy~~~l~G~~~~~C~~~G~Ws~~~~~c~~p~C~pvCg~P~   73 (75)
T d1q3xa2           1 CGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCEPVCGLSA   73 (75)
T ss_dssp             CCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEESCCSEEEECTTSCEEETTCCSSCCEEEECCCCCT
T ss_pred             CcCCCCCCCceEEeccCCCCcccCCEEEEeecCCceeeccCCceEEECCCCcCCCCCCCCcCCeeeCCCCCCC
Confidence            788999999998765556778999999999999995  679999999999999864     577886698875

>d1g40a3 g.18.1.1 (A:127-184) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=99.50  E-value=8.6e-15  Score=89.87  Aligned_cols=56  Identities=27%  Similarity=0.547  Sum_probs=51.2

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN   80 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~   80 (222)
                      ++|+.|+. +||.+......|.+|+.|+|+|+.||.|.|+..++|+ ||+|+. .|.|+
T Consensus         1 V~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws~-~P~C~   57 (58)
T d1g40a3           1 VKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCS-GGEWSD-PPTCQ   57 (58)
T ss_dssp             SCCCSCCCCTTEEECCSSSSCCSSEEECEEECTTCEEESSSSEEES-SSCBCS-CCEEE
T ss_pred             CCCcCCCCCCCeEEeCCCCcccCCCEEEEEcCCCCEEcCCCccEeC-CCccCC-CCcee
Confidence            47999988 9999987777899999999999999999999999998 999996 59996

>d1ly2a1 g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.2e-14  Score=91.94  Aligned_cols=62  Identities=26%  Similarity=0.502  Sum_probs=55.6

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCccee----CCCCcccCCCCceeeCc
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYC----QSDGTWSLDIPHCTNYT  220 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C----~~~G~W~~~~p~C~~~~  220 (222)
                      +.|+.|+.+.||.+......|.+|+.|+|.|++||.+.|.    ..++|    +.+|+|++++|.|++++
T Consensus         2 ~~C~~P~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~----~~~~C~~~~~~~g~Ws~~~P~C~~i~   67 (67)
T d1ly2a1           2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGE----KSLLCITKDKVDGTWDKPAPKCEYFN   67 (67)
T ss_dssp             CEECCCCCCTTEEECCCCSSEETTCEEEEEECTTEEEESC----SEEEEECSSSSSCEESSCCCEEEECC
T ss_pred             CcCcCCCCCCCeEEEcCCCcccCCCEEEEEcCCCCEEcCC----CCEEEeCCCCCCCEECCCCCEeeECC
Confidence            5799999999999887666788899999999999999988    78999    56899999999999985

>d1quba2 g.18.1.1 (A:63-120) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.7e-14  Score=87.53  Aligned_cols=57  Identities=25%  Similarity=0.642  Sum_probs=51.6

Q ss_pred             cCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       156 ~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      .|+.|..+.||.+....  |..|++|+|.|++||.+.|.    ..++|+.+|+|++++|+|++
T Consensus         2 ~C~~p~~~~nG~~~~~~--~~~g~~v~y~C~~Gy~l~G~----~~~~C~~~g~Ws~~~P~C~P   58 (58)
T d1quba2           2 VCPFAGILENGAVRYTT--FEYPNTISFSCNTGFYLNGA----DSAKCTEEGKWSPELPVCAP   58 (58)
T ss_dssp             BCCCCCCCTTEEEECSC--SBTTCEEEEEECTTEEEESC----SEEEECTTSCEESCCCEEEE
T ss_pred             CCcCCCCCCCcEEECCC--cccCCEEEEEcCCCCEEcCC----CCeEECCCCeECCCCCEeCC
Confidence            69999999999998754  44599999999999999988    88999999999999999985

>d1ly2a2 g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2e-14  Score=89.65  Aligned_cols=59  Identities=22%  Similarity=0.523  Sum_probs=52.2

Q ss_pred             eeCCCCccCCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeC-CCCceec
Q psy14531         23 IICPKIVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSG-AIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~-~~p~C~~   81 (222)
                      ..|+.|.++|+........|.+|+.|+|+|++||.|.|+..++|+.||+|++ +.|.|++
T Consensus         3 ~~Cp~P~~p~~~~~~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~~P~C~~   62 (63)
T d1ly2a2           3 SSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVS   62 (63)
T ss_dssp             CEECCCCCTTEEEEECCSSEETTCEEEEEECTTEEEESCSEEEECTTSSEESSCCCEEEE
T ss_pred             CcCcCCCCcCCcEEcCCCCccCCCEEEEECCCCCEEeCCCCeEECCCCcCCCCCCCEEeE
Confidence            4699887777776666678999999999999999999999999999999997 5799986

>d1ly2a1 g.18.1.1 (A:0-66) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.5e-14  Score=91.51  Aligned_cols=59  Identities=19%  Similarity=0.438  Sum_probs=54.1

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEe----CCCCeeeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVC----QKNGSWSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C----~~~g~W~~~~p~C~~   81 (222)
                      ++|+.|+. +||.+......|.+|++|+|+|+.||.|.|+..++|    +.+|+|+.+.|.|++
T Consensus         2 ~~C~~P~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~   65 (67)
T d1ly2a1           2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEY   65 (67)
T ss_dssp             CEECCCCCCTTEEECCCCSSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEEE
T ss_pred             CcCcCCCCCCCeEEEcCCCcccCCCEEEEEcCCCCEEcCCCCEEEeCCCCCCCEECCCCCEeeE
Confidence            57999888 999988777789999999999999999999999999    578999999999987

>d1gpza2 g.18.1.1 (A:290-357) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.9e-14  Score=91.20  Aligned_cols=59  Identities=31%  Similarity=0.617  Sum_probs=51.2

Q ss_pred             eeCCCCcc-CCCeEEec-cCCcccccEEEEEcCCCCeEeCC------CceEeCCCCeeeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGP------PDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~------~~~~C~~~g~W~~~~p~C~~   81 (222)
                      |+|+.|.. +||.+... ...|.+|++|+|+|+.||.|.|.      ..++|+++|+|+++.|.|+.
T Consensus         1 I~Cp~P~~~~nG~~~~~~~~~y~~~~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~P~C~v   67 (68)
T d1gpza2           1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI   67 (68)
T ss_dssp             CCBCCCCCSSTTEEEESCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEE
T ss_pred             CCCcCCCCCCCCEEeCCCCCceecCCEEEEEcCCCccccCccccccccceeECCCCEECCCCCeEee
Confidence            57999987 99998754 45689999999999999999984      35799999999999999974

>d2ok5a2 g.18.1.1 (A:138-199) Complement factor B {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.9e-14  Score=88.06  Aligned_cols=56  Identities=27%  Similarity=0.589  Sum_probs=51.5

Q ss_pred             eCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531         24 ICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        24 ~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      .|+.|+. +||.+..  ..+.+|+.|+|+|+.||.|.|+..++|+.+|+|+++.|.|++
T Consensus         2 ~C~~P~~p~ng~~~~--~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~   58 (62)
T d2ok5a2           2 YCSNPGIPIGTRKVG--SQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQD   58 (62)
T ss_dssp             SSCCCCCCTTCEEEC--CCCSTTCEEEEECCTTCEEESCSEEEBCTTSCBSSCCCEEEC
T ss_pred             CCcCCCCCCCCEEEC--CCcccCCEEEEECCCCCEEcCCCceEECCCCcCCCCCceECC
Confidence            4899988 8998764  568899999999999999999999999999999999999987

>d1quba1 g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.4e-14  Score=89.02  Aligned_cols=61  Identities=31%  Similarity=0.750  Sum_probs=54.4

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      ..|+.|+.+.|+.+...+..|..|+.|+|.|++||.+.|+.   ..++|+.+|+|++..|+|++
T Consensus         2 r~C~~P~~~~ng~~~~~~~~y~~g~~v~y~C~~Gy~l~g~~---~~~~C~~~G~Ws~~~p~C~P   62 (62)
T d1quba1           2 RTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGM---RKFICPLTGLWPINTLKCTP   62 (62)
T ss_dssp             CSEECCCCCTTEEEESCCSEECTTCEEEEEECTTEEETTSC---EEEECCTTSCCCCCCCCEEE
T ss_pred             CcCcCCCCCCCcEEecCCCcccCCCEEEEEeCCCCEEeecC---CeeEeCcCCEEcCCCCEEcC
Confidence            36889999999999988888999999999999999998761   46789999999999999985

>d1quba4 g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4.1e-14  Score=87.40  Aligned_cols=60  Identities=38%  Similarity=0.675  Sum_probs=52.8

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceee
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA  155 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~  155 (222)
                      |.|+.|+.+.||.+... ....|.+|++++|+|+.||.|.|+..++|+.+|+|+. .|.|++
T Consensus         1 V~C~~p~~~~nG~~~~~-~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~A   60 (60)
T d1quba4           1 VKCPFPSRPDNGFVNYP-AKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSA-MPSCKA   60 (60)
T ss_dssp             CEECCCCCCTTEEEECC-SCSSEETTCEEEEEECTTEEESSCSEEEBCTTSSBSC-CCCEEE
T ss_pred             CCCcCCCCCCCeEEEcC-CCCcccCCCEEEEECCCCCEEcCCCceEECCCCcCCc-CccEeC
Confidence            47999999999988643 3567899999999999999999999999999999986 789974

>d1hcca_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.9e-14  Score=88.62  Aligned_cols=58  Identities=19%  Similarity=0.487  Sum_probs=52.0

Q ss_pred             EEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee
Q psy14531         21 QQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN   80 (222)
Q Consensus        21 ~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~   80 (222)
                      +.+.|++|+. +||.+......|.+|++|+|+|+.||.|.|+..++|+ +|+|+. .|.|.
T Consensus         1 E~i~C~~pp~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws~-~P~Ci   59 (59)
T d1hcca_           1 EGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCL-GEKWSH-PPSCI   59 (59)
T ss_dssp             CCCCCCSCCCBTTEEESCCCSCCCSSCEECEEECTTSCEESCSCEEEE-TTEEEC-CCEEC
T ss_pred             CcCCCcCCCCCCCEEEeCCCCcccCCCEEEEECCCCCEEcCCCeeEeC-CCcCCC-CCEeC
Confidence            3578999888 9999887778899999999999999999999999998 899995 59984

>d1g40a3 g.18.1.1 (A:127-184) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=99.46  E-value=3.9e-14  Score=86.86  Aligned_cols=57  Identities=33%  Similarity=0.702  Sum_probs=51.9

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      +.|+.|+.+.||.+...+..|.+|+.|+|.|++||.+.|+    ..++|+ +|+|+. +|.|+
T Consensus         1 V~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~l~G~----~~~~C~-~g~Ws~-~P~C~   57 (58)
T d1g40a3           1 VKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGN----SGVLCS-GGEWSD-PPTCQ   57 (58)
T ss_dssp             SCCCSCCCCTTEEECCSSSSCCSSEEECEEECTTCEEESS----SSEEES-SSCBCS-CCEEE
T ss_pred             CCCcCCCCCCCeEEeCCCCcccCCCEEEEEcCCCCEEcCC----CccEeC-CCccCC-CCcee
Confidence            4699999999999998888889999999999999999998    789998 999997 59996

>d2o39c2 g.18.1.1 (C:63-126) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.4e-14  Score=88.91  Aligned_cols=59  Identities=31%  Similarity=0.528  Sum_probs=53.7

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCe---eeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGS---WSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~---W~~~~p~C~~   81 (222)
                      ++|+.|+. +||.+......|.+|++++|+|+.||.|.|...++|+.+|+   |+++.|.|++
T Consensus         1 ~tC~~p~~p~nG~~~~~~~~~~~gs~~~f~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~   63 (64)
T d2o39c2           1 ETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEK   63 (64)
T ss_dssp             CBCCCCCCCTTEEEECTTSCCBSSEEEEEEECTTCEECSCSEEEEEECSSCEEESSCCCCEEC
T ss_pred             CcCcCCCCCCCCEEEcCCCCcccCCEEEEECCCCCEEcCCCceEEeCCCCCCeECCCCCEeeE
Confidence            36998888 99999887778999999999999999999999999998875   9999999986

>d1quba3 g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.5e-14  Score=88.65  Aligned_cols=58  Identities=33%  Similarity=0.738  Sum_probs=50.9

Q ss_pred             eeCCCCcc-CCCeEEecc----CCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVE----QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~----~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      |+|+.|+. +||.+....    ..+.+|+.|+|+|+.||.|.|+..++|+.+|+|+ ..|.|++
T Consensus         1 V~C~~P~~p~ng~i~~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws-~~P~C~e   63 (63)
T d1quba3           1 IICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWT-KLPECRE   63 (63)
T ss_dssp             CEECCCCCCTTEEEEECCCSBTTBEETTCEEEEEECTTEEEESCSEEEBCTTSSBS-CCCEEEE
T ss_pred             CCCcCCCCCCCCEEeccccCCCCceecCCEEEEEcCCCCEEcCCCeEEEecCCeEC-cCCEecC
Confidence            57999998 999987643    3478899999999999999999999999999999 5699974

>d1gpza2 g.18.1.1 (A:290-357) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7.9e-14  Score=88.30  Aligned_cols=61  Identities=30%  Similarity=0.611  Sum_probs=52.9

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCC------CeEEeCcCCeeeCCCCceee
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGE------ETIVCTETGRWSRAPPRCKA  155 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~------~~~~C~~~g~Ws~~~p~C~~  155 (222)
                      |.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|.      ..++|+++|+|++..|.|++
T Consensus         1 I~Cp~P~~~~nG~~~~~-~~~~y~~~~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~P~C~v   67 (68)
T d1gpza2           1 IKCPQPKTLDEFTIIQN-LQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI   67 (68)
T ss_dssp             CCBCCCCCSSTTEEEES-CCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEE
T ss_pred             CCCcCCCCCCCCEEeCC-CCCceecCCEEEEEcCCCccccCccccccccceeECCCCEECCCCCeEee
Confidence            47999999999988643 367799999999999999999984      35799999999999999974

>d1g40a4 g.18.1.1 (A:185-243) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=99.45  E-value=1.1e-14  Score=89.66  Aligned_cols=58  Identities=28%  Similarity=0.794  Sum_probs=50.8

Q ss_pred             eeCCCCccCCCeEEec-cCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee
Q psy14531         23 IICPKIVVENPYLTLV-EQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN   80 (222)
Q Consensus        23 ~~C~~p~~~ng~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~   80 (222)
                      ++|+.|.++||.+... ...|.+|+.|+|+|+.||.|.|+..++|+.||+|+++.|.|.
T Consensus         1 V~C~~P~~~ng~~~~~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~Ci   59 (59)
T d1g40a4           1 VKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELPKCV   59 (59)
T ss_dssp             CCCCCCCCSSEEECSCCCSSCCSCCCCCEEECTTCCEESCSSCCEETTTEESSCCCEEC
T ss_pred             CCCcCCCCCCCEEECCCCCcccCCCEEEEEcCCCCEEcCCCceEECCCCEECCCCcEEC
Confidence            4798876689887644 356889999999999999999999999999999999999984

>d2ok5a2 g.18.1.1 (A:138-199) Complement factor B {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.3e-13  Score=85.60  Aligned_cols=58  Identities=28%  Similarity=0.726  Sum_probs=52.4

Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceeec
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKAR  156 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~~  156 (222)
                      .|+.|+.+.||.+.    ...|.+|++|+|+|+.||.|.|+..++|+.+|+|++..|.|+..
T Consensus         2 ~C~~P~~p~ng~~~----~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~   59 (62)
T d2ok5a2           2 YCSNPGIPIGTRKV----GSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDS   59 (62)
T ss_dssp             SSCCCCCCTTCEEE----CCCCSTTCEEEEECCTTCEEESCSEEEBCTTSCBSSCCCEEECT
T ss_pred             CCcCCCCCCCCEEE----CCCcccCCEEEEECCCCCEEcCCCceEECCCCcCCCCCceECCc
Confidence            59999999999876    34588999999999999999999999999999999999999853

>d1h03p2 g.18.1.1 (P:67-129) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3.5e-14  Score=88.59  Aligned_cols=58  Identities=31%  Similarity=0.722  Sum_probs=52.3

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeC---CCCeeeCCCCcee
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ---KNGSWSGAIPECN   80 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~---~~g~W~~~~p~C~   80 (222)
                      |.|++|+. +||.+......|.+|+.|+|+|+.||.|.|+..++|+   .+|+|+.+.|.|+
T Consensus         1 I~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~g~Ws~~~P~C~   62 (63)
T d1h03p2           1 IYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECR   62 (63)
T ss_dssp             CBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEESCSEEEEEEETTEEEESSCCCEEE
T ss_pred             CCCcCCCCCCCeEEECCCCcccCCCEEEEECCCCCEEcCCCcEEEeccCCCCEEcCCCCEeC
Confidence            57999888 9999987767789999999999999999999999994   5789999999996

>d1quba4 g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=5.8e-14  Score=86.71  Aligned_cols=59  Identities=29%  Similarity=0.569  Sum_probs=51.5

Q ss_pred             ecCCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        155 ARCEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      +.|+.|+.+.||.+.. .+..|.+|+.|+|.|++||.+.|+    ..++|+.+|+|+. +|+|+|
T Consensus         1 V~C~~p~~~~nG~~~~~~~~~~~~g~~~~y~C~~Gy~l~G~----~~~~C~~~G~Ws~-~P~C~A   60 (60)
T d1quba4           1 VKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGP----EEIECTKLGNWSA-MPSCKA   60 (60)
T ss_dssp             CEECCCCCCTTEEEECCSCSSEETTCEEEEEECTTEEESSC----SEEEBCTTSSBSC-CCCEEE
T ss_pred             CCCcCCCCCCCeEEEcCCCCcccCCCEEEEECCCCCEEcCC----CceEECCCCcCCc-CccEeC
Confidence            3689999999999874 345677899999999999999998    8999999999985 799986

>d2o39c2 g.18.1.1 (C:63-126) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=5.8e-14  Score=87.84  Aligned_cols=61  Identities=31%  Similarity=0.682  Sum_probs=54.8

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCc---ccCCCCceeeC
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGT---WSLDIPHCTNY  219 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~---W~~~~p~C~~~  219 (222)
                      +.|..|+.+.||.+......|.+|++|+|.|++||.+.|.    ..++|+.+|.   |++++|.|++|
T Consensus         1 ~tC~~p~~p~nG~~~~~~~~~~~gs~~~f~C~~Gy~l~G~----~~~~C~~~g~~~~Ws~~~P~C~~I   64 (64)
T d2o39c2           1 ETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGE----EILYCELKGSVAIWSGKPPICEKV   64 (64)
T ss_dssp             CBCCCCCCCTTEEEECTTSCCBSSEEEEEEECTTCEECSC----SEEEEEECSSCEEESSCCCCEECC
T ss_pred             CcCcCCCCCCCCEEEcCCCCcccCCEEEEECCCCCEEcCC----CceEEeCCCCCCeECCCCCEeeEC
Confidence            3699999999999988766788899999999999999998    8999998876   99999999976

>d1quba1 g.18.1.1 (A:1-62) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.5e-14  Score=88.98  Aligned_cols=59  Identities=19%  Similarity=0.368  Sum_probs=52.6

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCC-ceEeCCCCeeeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPP-DIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~-~~~C~~~g~W~~~~p~C~~   81 (222)
                      +.|+.|+. +||.+......|.+|+.|+|+|+.||.|.|+. .++|+.||+|+...|.|++
T Consensus         2 r~C~~P~~~~ng~~~~~~~~y~~g~~v~y~C~~Gy~l~g~~~~~~C~~~G~Ws~~~p~C~P   62 (62)
T d1quba1           2 RTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTP   62 (62)
T ss_dssp             CSEECCCCCTTEEEESCCSEECTTCEEEEEECTTEEETTSCEEEECCTTSCCCCCCCCEEE
T ss_pred             CcCcCCCCCCCcEEecCCCcccCCCEEEEEeCCCCEEeecCCeeEeCcCCEEcCCCCEEcC
Confidence            46899888 99999877777899999999999999999876 5789999999999999974

>d1hfia_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=5.7e-14  Score=87.29  Aligned_cols=60  Identities=25%  Similarity=0.666  Sum_probs=51.9

Q ss_pred             cccCCCCCCCCCceEEeCCC-CCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee
Q psy14531         93 PVHCPVPALPLNGHLIEDPT-GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        93 ~~~C~~p~~~~~g~~~~~~~-~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~  154 (222)
                      .+.|+.|+.+.||.+..... ...|.+|++|+|+|+.||.|.|++.++|+ +|+|+. +|.|+
T Consensus         2 ~i~C~~pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~Ce   62 (62)
T d1hfia_           2 KIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCY-MGKWSS-PPQCE   62 (62)
T ss_dssp             CCCEESCCCBTTBEECSCSSSCSEECTTCEEEEECCTTCCBCSSCEEEEE-TTEECC-CCCBC
T ss_pred             ccCCcCCCCCCCeEEeCCCCCCceecCCCEEEEECCCCCEECCCCeeEeC-CCccCC-CCccC
Confidence            37899999999998865322 45689999999999999999999999997 999996 78985

>d1quba3 g.18.1.1 (A:121-183) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: beta2-glycoprotein I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.1e-13  Score=86.29  Aligned_cols=60  Identities=30%  Similarity=0.709  Sum_probs=52.6

Q ss_pred             ccCCCCCCCCCceEEeCCC--CCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee
Q psy14531         94 VHCPVPALPLNGHLIEDPT--GGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~--~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~  154 (222)
                      |.|+.|+.|.||.+.....  ...|.+|++|+|+|+.||.|.|+..++|+.+|+|+. .|.|+
T Consensus         1 V~C~~P~~p~ng~i~~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~   62 (63)
T d1quba3           1 IICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LPECR   62 (63)
T ss_dssp             CEECCCCCCTTEEEEECCCSBTTBEETTCEEEEEECTTEEEESCSEEEBCTTSSBSC-CCEEE
T ss_pred             CCCcCCCCCCCCEEeccccCCCCceecCCEEEEEcCCCCEEcCCCeEEEecCCeECc-CCEec
Confidence            4799999999999865432  356899999999999999999999999999999995 69996

>d1ly2a2 g.18.1.1 (A:67-129) Complement receptor 2, cr2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 2, cr2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.1e-13  Score=86.30  Aligned_cols=60  Identities=22%  Similarity=0.520  Sum_probs=50.4

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccC-CCCceeeC
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL-DIPHCTNY  219 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~-~~p~C~~~  219 (222)
                      ..|+.|. ++++.++..+..|.+|+.|.|.|++||.+.|.    ..++|+.||+|++ ++|+|+++
T Consensus         3 ~~Cp~P~-~p~~~~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~C~~~g~Ws~~~~P~C~~I   63 (63)
T d1ly2a2           3 SSCPEPI-VPGGYKIRGSTPYRHGDSVTFACKTNFSMNGN----KSVWCQANNMWGPTRLPTCVSI   63 (63)
T ss_dssp             CEECCCC-CTTEEEEECCSSEETTCEEEEEECTTEEEESC----SEEEECTTSSEESSCCCEEEEC
T ss_pred             CcCcCCC-CcCCcEEcCCCCccCCCEEEEECCCCCEEeCC----CCeEECCCCcCCCCCCCEEeEC
Confidence            4688775 45666665566788899999999999999998    8999999999997 58999986

>d1md8a2 g.18.1.1 (A:358-433) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.5e-13  Score=88.88  Aligned_cols=64  Identities=25%  Similarity=0.401  Sum_probs=53.1

Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC---------EEcCCCeEEeCcCCeeeCCCCcee-ecCC
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH---------HLLGEETIVCTETGRWSRAPPRCK-ARCE  158 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy---------~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~  158 (222)
                      .|+.|+.+.||.+........+.+|++|+|+|+.||         .++|...++|+++|+|++..|.|+ +.|.
T Consensus         1 dC~~P~~i~nG~~~~~~~~~~~~y~s~v~y~C~~GY~~~~~~~~~~l~G~~~~tC~~~G~Ws~~~p~C~~~~C~   74 (76)
T d1md8a2           1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCL   74 (76)
T ss_dssp             CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEE
T ss_pred             CcCCCCCCCCccEEeccCCCceecCCEEEEEecCCccccccccceeecccceeeecCCCcCCCCCCCccCCCcc
Confidence            388999999999876555677899999999999999         567888999999999999999998 7785

>d1hfia_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=4.4e-14  Score=87.85  Aligned_cols=58  Identities=19%  Similarity=0.507  Sum_probs=50.0

Q ss_pred             EEeeCCCCcc-CCCeEEecc---CCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCcee
Q psy14531         21 QQIICPKIVV-ENPYLTLVE---QNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECN   80 (222)
Q Consensus        21 ~~~~C~~p~~-~ng~~~~~~---~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~   80 (222)
                      ++++|+.|+. +||.+....   ..|.+|++|+|+|+.||.|.|+..++|+ +|+|+. .|.|+
T Consensus         1 e~i~C~~pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~Ce   62 (62)
T d1hfia_           1 EKIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCY-MGKWSS-PPQCE   62 (62)
T ss_dssp             CCCCEESCCCBTTBEECSCSSSCSEECTTCEEEEECCTTCCBCSSCEEEEE-TTEECC-CCCBC
T ss_pred             CccCCcCCCCCCCeEEeCCCCCCceecCCCEEEEECCCCCEECCCCeeEeC-CCccCC-CCccC
Confidence            3578999988 999986543   3478999999999999999999999998 999995 69985

>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.4e-14  Score=90.68  Aligned_cols=62  Identities=19%  Similarity=0.404  Sum_probs=55.7

Q ss_pred             eeEEeeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCceec
Q psy14531         19 TCQQIICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPECNA   81 (222)
Q Consensus        19 ~C~~~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~C~~   81 (222)
                      .|++++|+.|+. +||.+... ..+.+|++++|+|+.||.|.|...++|+.+|   +|+.+.|.|+.
T Consensus         1 ~~~~~~C~~p~~p~nG~~~~~-~~~~~gs~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~   66 (68)
T d1ppqa_           1 EAEAKSCKTPPDPVNGMVHVI-TDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQR   66 (68)
T ss_dssp             CCSSCCBCCCCCCTTEEEECS-SCSCTTCCCEEEESTTCCBSSCSCCCEEECSSSEEESSCCCCBCC
T ss_pred             CCcCCCCcCCCCCCCcEEECC-CCcccCCEEEEEeCCCcEEcCCCcEEEeCCCCCCEECCCCCEeeE
Confidence            378899999988 99998754 5688999999999999999999999998776   69999999987

>d1hcca_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Factor H, 15th and 16th modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.1e-13  Score=85.04  Aligned_cols=57  Identities=23%  Similarity=0.481  Sum_probs=51.8

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      +.|+.|+.+.||.+...+..|.+|+.|+|.|++||.+.|.    ..++|+ +|+|+. +|+|+
T Consensus         3 i~C~~pp~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~l~G~----~~~~C~-~g~Ws~-~P~Ci   59 (59)
T d1hcca_           3 LPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGP----AIAKCL-GEKWSH-PPSCI   59 (59)
T ss_dssp             CCCCSCCCBTTEEESCCCSCCCSSCEECEEECTTSCEESC----SCEEEE-TTEEEC-CCEEC
T ss_pred             CCCcCCCCCCCEEEeCCCCcccCCCEEEEECCCCCEEcCC----CeeEeC-CCcCCC-CCEeC
Confidence            5799999999999988888899999999999999999988    789998 899996 69995

>d1g40a2 g.18.1.1 (A:65-126) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=99.40  E-value=2e-13  Score=84.78  Aligned_cols=57  Identities=23%  Similarity=0.542  Sum_probs=50.6

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeC----CCCeeeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQ----KNGSWSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~----~~g~W~~~~p~C~~   81 (222)
                      +.|+.|+. .||.+..  ..+.+|+.|+|+|+.||.|.|+..++|+    .+++|+.+.|.|++
T Consensus         1 k~C~~p~~p~nG~~~~--~~~~~gs~v~y~C~~Gy~l~G~~~~~C~~~~~~~~~Ws~~~P~Cea   62 (62)
T d1g40a2           1 RRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICES   62 (62)
T ss_dssp             CCCCSCCCCTTCEESS--CCCSSCCEECEECCTTCEECSCSSEEBCCSSSSCCCBSTTSSCEES
T ss_pred             CcCcCCCCCCCcEEEC--CCccCCCEEEEECCCCCEEcCCCceEEeCCCCCCCEECCCCccccC
Confidence            36999888 9999864  5688999999999999999999999997    57899999999974

>d1h03p2 g.18.1.1 (P:67-129) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.8e-13  Score=85.25  Aligned_cols=59  Identities=27%  Similarity=0.568  Sum_probs=53.1

Q ss_pred             ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCccee---CCCCcccCCCCcee
Q psy14531        155 ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYC---QSDGTWSLDIPHCT  217 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C---~~~G~W~~~~p~C~  217 (222)
                      +.|+.|+.+.||.+......|..|+.|+|.|++||.+.|+    ..++|   +.+|+|++++|.|.
T Consensus         1 I~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~----~~~~C~~~~~~g~Ws~~~P~C~   62 (63)
T d1h03p2           1 IYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGE----HSIYCTVNNDEGEWSGPPPECR   62 (63)
T ss_dssp             CBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEESC----SEEEEEEETTEEEESSCCCEEE
T ss_pred             CCCcCCCCCCCeEEECCCCcccCCCEEEEECCCCCEEcCC----CcEEEeccCCCCEEcCCCCEeC
Confidence            3699999999999998777788899999999999999988    88999   46799999999996

>d1g40a2 g.18.1.1 (A:65-126) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=99.39  E-value=3e-13  Score=83.96  Aligned_cols=57  Identities=32%  Similarity=0.640  Sum_probs=50.7

Q ss_pred             cCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeC----CCCcccCCCCceee
Q psy14531        156 RCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQ----SDGTWSLDIPHCTN  218 (222)
Q Consensus       156 ~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~----~~G~W~~~~p~C~~  218 (222)
                      .|+.|+.+.||.+....  +..|++|+|.|++||.+.|+    ..++|+    .+|+|++++|+|++
T Consensus         2 ~C~~p~~p~nG~~~~~~--~~~gs~v~y~C~~Gy~l~G~----~~~~C~~~~~~~~~Ws~~~P~Cea   62 (62)
T d1g40a2           2 RCPSPRDIDNGQLDIGG--VDFGSSITYSCNSGYHLIGE----SKSYCELGSTGSMVWNPEAPICES   62 (62)
T ss_dssp             CCCSCCCCTTCEESSCC--CSSCCEECEECCTTCEECSC----SSEEBCCSSSSCCCBSTTSSCEES
T ss_pred             cCcCCCCCCCcEEECCC--ccCCCEEEEECCCCCEEcCC----CceEEeCCCCCCCEECCCCccccC
Confidence            69999999999988754  45599999999999999998    889997    58999999999985

>d1ok3a2 g.18.1.1 (A:65-128) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=4.1e-13  Score=83.89  Aligned_cols=61  Identities=18%  Similarity=0.520  Sum_probs=51.9

Q ss_pred             cCCCCCCCCCeEEec---CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCceee
Q psy14531        156 RCEYPGEPQNGKIIP---LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCTN  218 (222)
Q Consensus       156 ~C~~p~~~~~g~~~~---~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~~  218 (222)
                      +|+.|+.+.||.+..   .+..|.+|++|+|.|++||.+.+.+.  ..++|+.+|+|+++.|.|+.
T Consensus         1 sC~~Pp~i~n~~~~~~~~~~~~f~~Gs~v~Y~C~~Gy~~~~~g~--~~~~C~~~g~Ws~~~p~C~r   64 (64)
T d1ok3a2           1 SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLS--PKLTCLQNLKWSTAVEFCKK   64 (64)
T ss_dssp             CCCSCCCCSSEEECTTGGGCCCCCTTCEEEEEECTTEEECTTSC--CEEEBCTTSCBCCCCCSEEE
T ss_pred             CcCCCCCCCCceEecCCccCCEECCCCEEEEEeCCCcEEeccCc--cEEEECCCCEECcCCceeeC
Confidence            489999999999874   35678999999999999999874422  78999999999999999973

>d1gkna1 g.18.1.1 (A:897-960) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.8e-13  Score=85.58  Aligned_cols=61  Identities=25%  Similarity=0.477  Sum_probs=53.9

Q ss_pred             cccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCcee
Q psy14531         93 PVHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        93 ~~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~  154 (222)
                      ++.|+.|+.+.||.+........|.+|++|+|.|+.||.+ |...++|+.||+|+.+.|.|+
T Consensus         3 e~~C~~Pp~~~~~~~~~~~~~~~y~~G~~v~Y~C~~Gy~~-~~~~~~C~~~g~Ws~~~p~C~   63 (64)
T d1gkna1           3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYG-RPFSITCLDNLVWSSPKDVCK   63 (64)
T ss_dssp             CCEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTEES-CCEEEEBCSSSCBCCCCSCCE
T ss_pred             cccCcCCCCCCcceEecCCCCCeecCCCEEEEEeCCCccc-CccccCccCCCEECCCCceee
Confidence            4789999999999987544567899999999999999975 788999999999999999996

>d1q3xa2 g.18.1.1 (A:366-440) Mannan-binding lectin serine protease 2 (MASP-2) domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Mannan-binding lectin serine protease 2 (MASP-2) domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=5.6e-13  Score=85.89  Aligned_cols=57  Identities=18%  Similarity=0.457  Sum_probs=47.9

Q ss_pred             CCCCcc-CCCeEEec--cCCcccccEEEEEcCCCCe--EeCCCceEeCCCCeeeCC-----CCceec
Q psy14531         25 CPKIVV-ENPYLTLV--EQNNTYRGHAIFQCSWGYQ--LKGPPDIVCQKNGSWSGA-----IPECNA   81 (222)
Q Consensus        25 C~~p~~-~ng~~~~~--~~~~~~g~~~~~~C~~gy~--l~G~~~~~C~~~g~W~~~-----~p~C~~   81 (222)
                      |+.|+. +||.+...  ...+.||++|+|+|+.||+  |.|+..++|+.||+|+++     .|.|++
T Consensus         1 C~~P~~i~nG~~~~~~~~~~~~ygs~v~Y~C~~Gy~~~l~G~~~~~C~~~G~Ws~~~~~c~~p~C~p   67 (75)
T d1q3xa2           1 CGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCEP   67 (75)
T ss_dssp             CCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEESCCSEEEECTTSCEEETTCCSSCCEEEE
T ss_pred             CcCCCCCCCceEEeccCCCCcccCCEEEEeecCCceeeccCCceEEECCCCcCCCCCCCCcCCeeeC
Confidence            778877 99998754  3458899999999999996  569999999999999865     467777

>d1ok3a2 g.18.1.1 (A:65-128) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4.7e-13  Score=83.61  Aligned_cols=60  Identities=23%  Similarity=0.453  Sum_probs=51.9

Q ss_pred             cCCCCCCCCCceEEeCC-CCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCCeeeCCCCcee
Q psy14531         95 HCPVPALPLNGHLIEDP-TGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~-~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g~Ws~~~p~C~  154 (222)
                      .|+.|+.+.||.+.... ....|.+|++|+|+|+.||.+.  |..+++|+.||+|+...|.|+
T Consensus         1 sC~~Pp~i~n~~~~~~~~~~~~f~~Gs~v~Y~C~~Gy~~~~~g~~~~~C~~~g~Ws~~~p~C~   63 (64)
T d1ok3a2           1 SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCK   63 (64)
T ss_dssp             CCCSCCCCSSEEECTTGGGCCCCCTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCCCCSEE
T ss_pred             CcCCCCCCCCceEecCCccCCEECCCCEEEEEeCCCcEEeccCccEEEECCCCEECcCCceee
Confidence            48999999999886321 2577999999999999999987  678999999999999999996

>d1md8a2 g.18.1.1 (A:358-433) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.4e-13  Score=87.86  Aligned_cols=58  Identities=17%  Similarity=0.264  Sum_probs=48.0

Q ss_pred             eCCCCcc-CCCeEEec--cCCcccccEEEEEcCCCC---------eEeCCCceEeCCCCeeeCCCCceec
Q psy14531         24 ICPKIVV-ENPYLTLV--EQNNTYRGHAIFQCSWGY---------QLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        24 ~C~~p~~-~ng~~~~~--~~~~~~g~~~~~~C~~gy---------~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      .|+.|+. +||.+...  ...+.||++|+|+|+.||         .|.|...++|+++|+|+.+.|.|+.
T Consensus         1 dC~~P~~i~nG~~~~~~~~~~~~y~s~v~y~C~~GY~~~~~~~~~~l~G~~~~tC~~~G~Ws~~~p~C~~   70 (76)
T d1md8a2           1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKI   70 (76)
T ss_dssp             CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSC
T ss_pred             CcCCCCCCCCccEEeccCCCceecCCEEEEEecCCccccccccceeecccceeeecCCCcCCCCCCCccC
Confidence            3888887 99998765  346899999999999999         5667888999999999999999987

>d1ok3a1 g.18.1.1 (A:1-64) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4.5e-13  Score=83.66  Aligned_cols=61  Identities=18%  Similarity=0.345  Sum_probs=52.4

Q ss_pred             ecCCCCCCCCCeEEecC-ccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        155 ARCEYPGEPQNGKIIPL-KFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~~-~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      ..|+.|+.+.||.+... +..|.+|+.|+|.|++||.+.+.+.  .+++|+.||+|++..|.|+
T Consensus         2 ~~C~~Pp~i~ng~~~~~~~~~y~~g~~v~Y~C~~Gy~~~~~~~--~~~~C~~ng~Ws~~~p~C~   63 (64)
T d1ok3a1           2 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEK--DSVICLKGSQWSDIEEFCN   63 (64)
T ss_dssp             CEECSCCCCTTEEECCTTCSCEETTCEEEEEECTTCEECTTSC--CEEEEETTTEECCCCCCEE
T ss_pred             CCCCCCCCCCCcEEecCCCCeecCCCEEEEEeCCCcEEccCCc--ccEEeCCCCEECCCCceEc
Confidence            46999999999998754 5568899999999999999975532  5789999999999999997

>d1h03p1 g.18.1.1 (P:5-66) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.9e-13  Score=83.97  Aligned_cols=58  Identities=28%  Similarity=0.607  Sum_probs=51.1

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCC---eeeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNG---SWSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~W~~~~p~C~~   81 (222)
                      +.|+.|.. +||.+... ..+.+|+.|+|+|+.||.|.|...++|+.+|   +|+++.|.|++
T Consensus         1 ksC~~p~~p~nG~~~~~-~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~~~~Ws~~~P~C~~   62 (62)
T d1h03p1           1 KSCPNPGEIRNGQIDVP-GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE   62 (62)
T ss_dssp             CBCCCCCCCTTEEEECT-TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEE
T ss_pred             CcCcCCCCCCCeeEEcC-CCcCcCCEEEEECCCCCEEcCCCcEEEeCCCCcCeECCCCCEEcC
Confidence            36999888 99988754 5689999999999999999999999999877   49999999974

>d1g40a4 g.18.1.1 (A:185-243) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=99.35  E-value=1.5e-13  Score=84.44  Aligned_cols=58  Identities=28%  Similarity=0.640  Sum_probs=49.9

Q ss_pred             ecCCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        155 ARCEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      +.|+.| .+.||.+.. .+..|..|+.|+|.|++||.+.|.    ..++|+.+|+|++++|.|+
T Consensus         1 V~C~~P-~~~ng~~~~~~~~~y~~g~~v~~~C~~Gy~l~G~----~~~~C~~~G~Ws~~~P~Ci   59 (59)
T d1g40a4           1 VKCPHP-TISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGS----SSSTCSPGNTWKPELPKCV   59 (59)
T ss_dssp             CCCCCC-CCSSEEECSCCCSSCCSCCCCCEEECTTCCEESC----SSCCEETTTEESSCCCEEC
T ss_pred             CCCcCC-CCCCCEEECCCCCcccCCCEEEEEcCCCCEEcCC----CceEECCCCEECCCCcEEC
Confidence            368766 577988774 356788999999999999999988    7899999999999999995

>d1ppqa_ g.18.1.1 (A:) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4e-13  Score=84.89  Aligned_cols=62  Identities=26%  Similarity=0.503  Sum_probs=54.0

Q ss_pred             ee-ecCCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccCCCCceeeC
Q psy14531        153 CK-ARCEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSLDIPHCTNY  219 (222)
Q Consensus       153 C~-~~C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~~~p~C~~~  219 (222)
                      |+ ..|+.|+.+.||.+.... .|..|++++|.|++||.+.|.    ..++|+.+|   +|++++|.|+.|
T Consensus         2 ~~~~~C~~p~~p~nG~~~~~~-~~~~gs~~~y~C~~Gy~l~G~----~~~~C~~~g~~~~Ws~~~P~C~~I   67 (68)
T d1ppqa_           2 AEAKSCKTPPDPVNGMVHVIT-DIQVGSRITYSCTTGHRLIGH----SSAECILSGNTAHWSTKPPICQRI   67 (68)
T ss_dssp             CSSCCBCCCCCCTTEEEECSS-CSCTTCCCEEEESTTCCBSSC----SCCCEEECSSSEEESSCCCCBCCC
T ss_pred             CcCCCCcCCCCCCCcEEECCC-CcccCCEEEEEeCCCcEEcCC----CcEEEeCCCCCCEECCCCCEeeEC
Confidence            66 789999999999987553 466799999999999999988    789998777   699999999876

>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1S protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.5e-13  Score=84.71  Aligned_cols=58  Identities=19%  Similarity=0.314  Sum_probs=49.8

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeE---eCCCceEeCCCCeeeCCCCceec
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQL---KGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l---~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      +.|..|+. +||.+... ..+.||++++|+|+.||.+   .|+..++|++||+|+.+.+.|+.
T Consensus         1 V~Cg~P~~i~ng~~~~~-~~~~ygs~v~y~C~~Gy~~~~~~g~~~~~C~~dG~Ws~~~~~c~~   62 (68)
T d1elva2           1 LDCGIPESIENGKVEDP-ESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPEL   62 (68)
T ss_dssp             CBCCSCCCCTTEEECCC-SCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSC
T ss_pred             CCCcCCCCCCCeEEECC-CCCCCCcEEEEEecCCceEEEecCccEEEECCCCcCcCCCCCCcC
Confidence            46999987 99998754 5578999999999999953   58899999999999999999987

>d1gkga2 g.18.1.1 (A:1023-1092) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=5.5e-13  Score=84.71  Aligned_cols=58  Identities=33%  Similarity=0.707  Sum_probs=50.9

Q ss_pred             eeCCCCcc-CCCeEEecc-CCcccccEEEEEcCCC------CeEeCCCceEeCCC----CeeeCCCCcee
Q psy14531         23 IICPKIVV-ENPYLTLVE-QNNTYRGHAIFQCSWG------YQLKGPPDIVCQKN----GSWSGAIPECN   80 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~-~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~----g~W~~~~p~C~   80 (222)
                      |+|+.|+. +||.+.... ..|.+|++|+|+|++|      |.|.|+..++|+.+    |+|+.+.|.|.
T Consensus         1 I~C~~P~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~L~G~~~~~C~~~~~~~G~Ws~~~P~Ci   70 (70)
T d1gkga2           1 IPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCI   70 (70)
T ss_dssp             CCCCCCCCCTTCCBCSSCSSCCCSSCEEEBCCCCTTSCCSSCCEESCCEEECCCSSSSSCCCSCCCCEEC
T ss_pred             CCCcCCCCCCCcEEeCCCCCcccCCCEEEEEcCCCCcccccEEEeCCcEEEEEeCCCcccEECCCCceEC
Confidence            57999987 999987653 4588999999999999      99999999999875    78999999994

>d1zjka2 g.18.1.1 (A:311-363) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=6.3e-13  Score=79.43  Aligned_cols=44  Identities=32%  Similarity=0.663  Sum_probs=40.0

Q ss_pred             eccCCcccccEEEEEcCCCCeEe------CCCceEeCCCCeeeCCCCcee
Q psy14531         37 LVEQNNTYRGHAIFQCSWGYQLK------GPPDIVCQKNGSWSGAIPECN   80 (222)
Q Consensus        37 ~~~~~~~~g~~~~~~C~~gy~l~------G~~~~~C~~~g~W~~~~p~C~   80 (222)
                      +.+..|.+++.|+|+|+.||.|.      |+..++|++||+|+++.|.|+
T Consensus         3 P~~~~y~~~d~V~f~C~~GY~L~~~~~~~gs~~~~C~~~G~Ws~~~P~C~   52 (53)
T d1zjka2           3 PVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACS   52 (53)
T ss_dssp             SCCSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSSSSBSSCCCEEE
T ss_pred             CcCCcccCCCEEEEEeCCCCeeccccccCCcceeEECCCCcCCCCCceEe
Confidence            34567999999999999999996      888999999999999999996

>d1elva2 g.18.1.1 (A:342-409) Complement C1S protease domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1S protease domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.4e-12  Score=82.38  Aligned_cols=62  Identities=18%  Similarity=0.471  Sum_probs=51.2

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCC---EEcCCCeEEeCcCCeeeCCCCcee-ecCC
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRH---HLLGEETIVCTETGRWSRAPPRCK-ARCE  158 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy---~~~g~~~~~C~~~g~Ws~~~p~C~-~~C~  158 (222)
                      |.|+.|+.++||.+..   ...+.+|++++|+|++||   .+.|...++|++||+|+...+.|+ +.|.
T Consensus         1 V~Cg~P~~i~ng~~~~---~~~~~ygs~v~y~C~~Gy~~~~~~g~~~~~C~~dG~Ws~~~~~c~~p~C~   66 (68)
T d1elva2           1 LDCGIPESIENGKVED---PESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCV   66 (68)
T ss_dssp             CBCCSCCCCTTEEECC---CSCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCCEE
T ss_pred             CCCcCCCCCCCeEEEC---CCCCCCCcEEEEEecCCceEEEecCccEEEECCCCcCcCCCCCCcCCCcc
Confidence            4799999999998753   345678999999999999   345889999999999999888988 6674

>d1ok3a1 g.18.1.1 (A:1-64) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.6e-12  Score=81.04  Aligned_cols=59  Identities=14%  Similarity=0.481  Sum_probs=51.4

Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCCeeeCCCCcee
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWSRAPPRCK  154 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g~Ws~~~p~C~  154 (222)
                      .|+.|+.+.||.+... ....|.+|++|+|+|..||.++  +..+++|+.||+|++..|.|+
T Consensus         3 ~C~~Pp~i~ng~~~~~-~~~~y~~g~~v~Y~C~~Gy~~~~~~~~~~~C~~ng~Ws~~~p~C~   63 (64)
T d1ok3a1           3 DCGLPPDVPNAQPALE-GRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCN   63 (64)
T ss_dssp             EECSCCCCTTEEECCT-TCSCEETTCEEEEEECTTCEECTTSCCEEEEETTTEECCCCCCEE
T ss_pred             CCCCCCCCCCcEEecC-CCCeecCCCEEEEEeCCCcEEccCCcccEEeCCCCEECCCCceEc
Confidence            6999999999987643 3567899999999999999997  456889999999999999996

>d1gkga2 g.18.1.1 (A:1023-1092) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1e-12  Score=83.42  Aligned_cols=60  Identities=32%  Similarity=0.760  Sum_probs=52.1

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCC------CEEcCCCeEEeCcC----CeeeCCCCcee
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDR------HHLLGEETIVCTET----GRWSRAPPRCK  154 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~g------y~~~g~~~~~C~~~----g~Ws~~~p~C~  154 (222)
                      |.|+.|+.+.||.+... ....|.+|++|+|+|+.|      |.|+|+..++|+.+    |+|++..|.|.
T Consensus         1 I~C~~P~~~~nG~~~~~-~~~~~~~g~~v~y~C~~G~~~~~~y~L~G~~~~~C~~~~~~~G~Ws~~~P~Ci   70 (70)
T d1gkga2           1 IPCGLPPTIANGDFIST-NRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCI   70 (70)
T ss_dssp             CCCCCCCCCTTCCBCSS-CSSCCCSSCEEEBCCCCTTSCCSSCCEESCCEEECCCSSSSSCCCSCCCCEEC
T ss_pred             CCCcCCCCCCCcEEeCC-CCCcccCCCEEEEEcCCCCcccccEEEeCCcEEEEEeCCCcccEECCCCceEC
Confidence            47999999999987632 246689999999999999      99999999999865    89999999994

>d1h03p1 g.18.1.1 (P:5-66) Complement decay-accelerating factor (Daf, CD55) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement decay-accelerating factor (Daf, CD55)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.4e-12  Score=79.70  Aligned_cols=57  Identities=33%  Similarity=0.719  Sum_probs=50.9

Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCe---eeCCCCcee
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGR---WSRAPPRCK  154 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~---Ws~~~p~C~  154 (222)
                      .|+.|+.+.||.+..   ...+.+|++|+|+|+.||.|+|...++|+.+|.   |++..|.|+
T Consensus         2 sC~~p~~p~nG~~~~---~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~~~~Ws~~~P~C~   61 (62)
T d1h03p1           2 SCPNPGEIRNGQIDV---PGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECR   61 (62)
T ss_dssp             BCCCCCCCTTEEEEC---TTCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEE
T ss_pred             cCcCCCCCCCeeEEc---CCCcCcCCEEEEECCCCCEEcCCCcEEEeCCCCcCeECCCCCEEc
Confidence            699999999998763   345789999999999999999999999998885   999999996

>d2z3qb1 g.18.1.1 (B:1-78) Interleukin-15 receptor subunit alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-15 receptor subunit alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=3.7e-14  Score=92.12  Aligned_cols=69  Identities=16%  Similarity=0.243  Sum_probs=58.1

Q ss_pred             eeCCCCcc-CCCeEEeccCCcccccEEEEEcCCCCeEeCC--CceEeCCCCeeeCCCCceeccceeeeecccccccCCCC
Q psy14531         23 IICPKIVV-ENPYLTLVEQNNTYRGHAIFQCSWGYQLKGP--PDIVCQKNGSWSGAIPECNAFFFFFFFFFFNPVHCPVP   99 (222)
Q Consensus        23 ~~C~~p~~-~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~--~~~~C~~~g~W~~~~p~C~~~~~~~~~~~~~~~~C~~p   99 (222)
                      |.|+.|.. +||.+..  ..|.+|++|+|+|+.||+|.|.  ..++|+.||+|+...+.|..            +.|..+
T Consensus         1 I~C~~P~~~~ng~~~~--~~~~~g~~v~y~C~~GY~~~~~~s~~~~C~~ng~w~~~~~~c~~------------i~C~~~   66 (78)
T d2z3qb1           1 ITCPPPMSVEHADIWV--KSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPS------------LKCIRD   66 (78)
T ss_dssp             CBCCCCCCCTTEECCC--SCCBTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCC------------CCEEEC
T ss_pred             CCCcCCCCCCCceEEc--ccccCCCEEEEEeCCCcEEccCCcCcEEeECCCCcccccccCCC------------CCCCCC
Confidence            57999988 9998753  5699999999999999999874  46899999999998899998            889776


Q ss_pred             CCCCCc
Q psy14531        100 ALPLNG  105 (222)
Q Consensus       100 ~~~~~g  105 (222)
                      +.+.|+
T Consensus        67 P~i~~~   72 (78)
T d2z3qb1          67 PALVHQ   72 (78)
T ss_dssp             HHHHHH
T ss_pred             CCCCCC
Confidence            665554

>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=5.6e-12  Score=78.02  Aligned_cols=59  Identities=24%  Similarity=0.515  Sum_probs=48.8

Q ss_pred             CCCCCCCCCeEEec-CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCC-CCcee
Q psy14531        157 CEYPGEPQNGKIIP-LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLD-IPHCT  217 (222)
Q Consensus       157 C~~p~~~~~g~~~~-~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~-~p~C~  217 (222)
                      |+.|+.+.||.+.. .+..|.+|++|+|.|++||.+.+.+.  ..++|+.||+|++. .+.|.
T Consensus         1 C~~PP~i~ng~~~~~~~~~y~~g~~v~Y~C~~Gy~l~~~~~--~~i~C~~ng~WSp~~~~~C~   61 (62)
T d2o39c1           1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLA--THTICDRNHTWLPVSDDACY   61 (62)
T ss_dssp             CBSCCCCSSEEESSCCCSBCCTTCEEEEEECTTEEECSSSC--SEEECCSSSSCCCCCSTTEE
T ss_pred             CcCCCCcCCCEEeCCcCCccCCCCEEEEEeCCCcEECCCCC--CEEEECCCCEECCCCCCCcc
Confidence            78899999999874 45679999999999999999875532  57999999999964 35685

>d1gkna1 g.18.1.1 (A:897-960) Complement receptor 1, cr1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement receptor 1, cr1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.1e-12  Score=80.52  Aligned_cols=58  Identities=19%  Similarity=0.318  Sum_probs=50.5

Q ss_pred             ecCCCCCCCCCeEEec--CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        155 ARCEYPGEPQNGKIIP--LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       155 ~~C~~p~~~~~g~~~~--~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      ..|+.|+.+.||.+..  ....|.+|+.|+|.|++||.+ +.    ..++|+.+|+|+++.|.|.
T Consensus         4 ~~C~~Pp~~~~~~~~~~~~~~~y~~G~~v~Y~C~~Gy~~-~~----~~~~C~~~g~Ws~~~p~C~   63 (64)
T d1gkna1           4 AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYG-RP----FSITCLDNLVWSSPKDVCK   63 (64)
T ss_dssp             CEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTEES-CC----EEEEBCSSSCBCCCCSCCE
T ss_pred             ccCcCCCCCCcceEecCCCCCeecCCCEEEEEeCCCccc-Cc----cccCccCCCEECCCCceee
Confidence            5699999999999863  356788999999999999975 55    6789999999999999996

>d2z3qb1 g.18.1.1 (B:1-78) Interleukin-15 receptor subunit alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-15 receptor subunit alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.5e-13  Score=89.25  Aligned_cols=69  Identities=13%  Similarity=0.167  Sum_probs=56.3

Q ss_pred             ccCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCC--CeEEeCcCCeeeCCCCcee-ecCCCCCCCCCe
Q psy14531         94 VHCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGE--ETIVCTETGRWSRAPPRCK-ARCEYPGEPQNG  166 (222)
Q Consensus        94 ~~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~--~~~~C~~~g~Ws~~~p~C~-~~C~~p~~~~~g  166 (222)
                      |.|+.|+.+.||.+.    ...|.+|++|+|+|+.||.+.+.  ..++|+.||+|+...+.|+ +.|..++.+.++
T Consensus         1 I~C~~P~~~~ng~~~----~~~~~~g~~v~y~C~~GY~~~~~~s~~~~C~~ng~w~~~~~~c~~i~C~~~P~i~~~   72 (78)
T d2z3qb1           1 ITCPPPMSVEHADIW----VKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPSLKCIRDPALVHQ   72 (78)
T ss_dssp             CBCCCCCCCTTEECC----CSCCBTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEEECHHHHHH
T ss_pred             CCCcCCCCCCCceEE----cccccCCCEEEEEeCCCcEEccCCcCcEEeECCCCcccccccCCCCCCCCCCCCCCC
Confidence            479999999999875    45689999999999999999863  5689999999988778887 678766554433

>d1zjka2 g.18.1.1 (A:311-363) Complement C1R protease domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement C1R protease domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=4.3e-12  Score=75.69  Aligned_cols=47  Identities=28%  Similarity=0.612  Sum_probs=38.8

Q ss_pred             cCccccCCCCeEEEEcCCCCeeccCC---CCCCcceeCCCCcccCCCCcee
Q psy14531        170 PLKFFYDPGDHIQVTCNDGYVKPLDI---TPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       170 ~~~~~~~~g~~v~y~C~~gy~~~~~~---~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      +.+..|..|+.|+|+|++||.+.+..   ++ ..++|+.||+|++++|+|+
T Consensus         3 P~~~~y~~~d~V~f~C~~GY~L~~~~~~~gs-~~~~C~~~G~Ws~~~P~C~   52 (53)
T d1zjka2           3 PVQAKYILKDSFSIFCETGYELLQGHLPLKS-FTAVCQKDGSWDRPMPACS   52 (53)
T ss_dssp             SCCSCBCTTCEEEEEECTTEEEEETTEECSC-CEEEBCSSSSBSSCCCEEE
T ss_pred             CcCCcccCCCEEEEEeCCCCeeccccccCCc-ceeEECCCCcCCCCCceEe
Confidence            44567888999999999999986321   11 7899999999999999996

>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: CD46 (membrane cofactor protein, MCP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=7.6e-12  Score=77.40  Aligned_cols=58  Identities=17%  Similarity=0.404  Sum_probs=47.8

Q ss_pred             CCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCCeeeCC-CCcee
Q psy14531         96 CPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWSRA-PPRCK  154 (222)
Q Consensus        96 C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g~Ws~~-~p~C~  154 (222)
                      |+.|+.+.||.+... ....|.+|++|+|+|+.||.+.  +..+++|++||+|+.. .+.|.
T Consensus         1 C~~PP~i~ng~~~~~-~~~~y~~g~~v~Y~C~~Gy~l~~~~~~~i~C~~ng~WSp~~~~~C~   61 (62)
T d2o39c1           1 CEEPPTFEAMELIGK-PKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACY   61 (62)
T ss_dssp             CBSCCCCSSEEESSC-CCSBCCTTCEEEEEECTTEEECSSSCSEEECCSSSSCCCCCSTTEE
T ss_pred             CcCCCCcCCCEEeCC-cCCccCCCCEEEEEeCCCcEECCCCCCEEEECCCCEECCCCCCCcc
Confidence            788999999988643 3677999999999999999998  4468999999999864 35674

>d1srza_ g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: GABA-B receptor 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.22  E-value=5.8e-12  Score=79.01  Aligned_cols=57  Identities=30%  Similarity=0.602  Sum_probs=48.7

Q ss_pred             eCCCCc-c-CCCeEEeccCC--cccccEEEEEcCCCCeEeCCCceEeCCCCeeeCCCCceec
Q psy14531         24 ICPKIV-V-ENPYLTLVEQN--NTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSGAIPECNA   81 (222)
Q Consensus        24 ~C~~p~-~-~ng~~~~~~~~--~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~~~p~C~~   81 (222)
                      .|..+. . +||.+......  +.+|+.|+|+|+.||.|.|+..++|+ +|+|+++.|.|+.
T Consensus         7 ~C~~~~~ti~NG~v~~~~~~~~~~~G~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~~~P~C~v   67 (68)
T d1srza_           7 ICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHCQV   67 (68)
T ss_dssp             SCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCCEEEEE-TTEESSCCCCEEE
T ss_pred             ccCCCCCcccCCEEEeCCCCccccCCCEEEEECCCCCeECCCCeeECC-CCeECCCCCeEeC
Confidence            377653 3 99999876543  56799999999999999999999997 9999999999975

>d1srza_ g.18.1.1 (A:) GABA-B receptor 1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: GABA-B receptor 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.22  E-value=9.5e-12  Score=78.02  Aligned_cols=60  Identities=30%  Similarity=0.627  Sum_probs=50.4

Q ss_pred             cCCCC-CCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEcCCCeEEeCcCCeeeCCCCceee
Q psy14531         95 HCPVP-ALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLLGEETIVCTETGRWSRAPPRCKA  155 (222)
Q Consensus        95 ~C~~p-~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~g~~~~~C~~~g~Ws~~~p~C~~  155 (222)
                      .|..+ ..++||.+........|.+|++++|+|+.||.|.|+..++|. +|+|++..|.|++
T Consensus         7 ~C~~~~~ti~NG~v~~~~~~~~~~~G~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~~~P~C~v   67 (68)
T d1srza_           7 ICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHCQV   67 (68)
T ss_dssp             SCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCCEEEEE-TTEESSCCCCEEE
T ss_pred             ccCCCCCcccCCEEEeCCCCccccCCCEEEEECCCCCeECCCCeeECC-CCeECCCCCeEeC
Confidence            46654 468899987654445678899999999999999999999996 9999999999974

>d2ok5a4 g.18.1.1 (A:9-76) Complement factor B {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=3e-05  Score=46.97  Aligned_cols=48  Identities=19%  Similarity=0.385  Sum_probs=40.0

Q ss_pred             eeCCC--CccCCCeEEeccCCcccccEEEEEcCCCCeEeCCCceEeCCCCeeeC
Q psy14531         23 IICPK--IVVENPYLTLVEQNNTYRGHAIFQCSWGYQLKGPPDIVCQKNGSWSG   74 (222)
Q Consensus        23 ~~C~~--p~~~ng~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~W~~   74 (222)
                      ..|+.  ..+..|.++...    .|+.++|.|..||+..-...+.|+.+|+|+.
T Consensus         2 ~sC~~~~v~I~GG~~tl~~----~GSvL~Y~CP~G~YPyPv~~R~C~~~G~Ws~   51 (68)
T d2ok5a4           2 GSCSLEGVEIKGGSFRLLQ----EGQALEYVCPSGFYPYPVQTRTCRSTGSWST   51 (68)
T ss_dssp             CCCCCTTCCCBTCEEEEEG----GGTEEEEECCTTEEEESCSEEEBCTTSSBCC
T ss_pred             CCCCccccEEeCCEEEEcC----CCeEEEEECCCCCCCCCccEEEecCCCcccc
Confidence            35885  344888888743    4999999999999998889999999999974

>d2b5id2 g.18.1.1 (D:103-165) Interleukin-2 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-2 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=2.6e-05  Score=45.82  Aligned_cols=59  Identities=20%  Similarity=0.402  Sum_probs=43.1

Q ss_pred             CCCCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCC-CC--cccCCCCceee
Q psy14531        157 CEYPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQS-DG--TWSLDIPHCTN  218 (222)
Q Consensus       157 C~~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~-~G--~W~~~~p~C~~  218 (222)
                      |+.|+...|..+. ....|.+|++++|.|..||.....+.  ..++|.. +|  .|+.+...|+.
T Consensus         2 C~ePp~w~He~~k-riyhf~vGQ~vhyqC~~Gy~~~~~~p--a~s~CK~~~Gk~~WT~p~l~C~~   63 (63)
T d2b5id2           2 CREPPPWENEATE-RIYHFVVGQMVYYQCVQGYRALHRGP--AESVCKMTHGKTRWTQPQLICTG   63 (63)
T ss_dssp             BCCCCCCSSCCSS-CCEECCTTCEEEEEECTTCEEEESSC--SEEEEEECSSCEEECCCCEEEEC
T ss_pred             CCCCCCCCCccce-eeeEEecccEEEEEccccchhcCCCc--hhhhHHhhcCcceeeCCCceeCC
Confidence            7788888886332 33567889999999999998654432  6788862 34  49998888863

>d2ok5a4 g.18.1.1 (A:9-76) Complement factor B {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement factor B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=5.6e-05  Score=45.73  Aligned_cols=48  Identities=25%  Similarity=0.530  Sum_probs=35.3

Q ss_pred             cCCCC-CCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccC
Q psy14531        156 RCEYP-GEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSL  211 (222)
Q Consensus       156 ~C~~p-~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~  211 (222)
                      .|..- -.+..|.+...+    .|+.+.|.|..||+.--.    ..++|+.+|+|+.
T Consensus         3 sC~~~~v~I~GG~~tl~~----~GSvL~Y~CP~G~YPyPv----~~R~C~~~G~Ws~   51 (68)
T d2ok5a4           3 SCSLEGVEIKGGSFRLLQ----EGQALEYVCPSGFYPYPV----QTRTCRSTGSWST   51 (68)
T ss_dssp             CCCCTTCCCBTCEEEEEG----GGTEEEEECCTTEEEESC----SEEEBCTTSSBCC
T ss_pred             CCCccccEEeCCEEEEcC----CCeEEEEECCCCCCCCCc----cEEEecCCCcccc
Confidence            45532 245566666533    499999999999987544    7899999999975

>d2b5id2 g.18.1.1 (D:103-165) Interleukin-2 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-2 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=8.1e-05  Score=43.66  Aligned_cols=57  Identities=26%  Similarity=0.504  Sum_probs=44.0

Q ss_pred             cCCCCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeC-cCC--eeeCCCCcee
Q psy14531         95 HCPVPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCT-ETG--RWSRAPPRCK  154 (222)
Q Consensus        95 ~C~~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~-~~g--~Ws~~~p~C~  154 (222)
                      +|..|+..+|..+.   ....|.+|++|.|.|..||+..  +...++|- -+|  .|+.+...|.
T Consensus         1 hC~ePp~w~He~~k---riyhf~vGQ~vhyqC~~Gy~~~~~~pa~s~CK~~~Gk~~WT~p~l~C~   62 (63)
T d2b5id2           1 HCREPPPWENEATE---RIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICT   62 (63)
T ss_dssp             CBCCCCCCSSCCSS---CCEECCTTCEEEEEECTTCEEEESSCSEEEEEECSSCEEECCCCEEEE
T ss_pred             CCCCCCCCCCccce---eeeEEecccEEEEEccccchhcCCCchhhhHHhhcCcceeeCCCceeC
Confidence            47778888887543   3566899999999999999754  77889994 245  5998777774

>d1g40a1 g.18.1.1 (A:1-64) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=96.69  E-value=0.0024  Score=35.68  Aligned_cols=57  Identities=32%  Similarity=0.578  Sum_probs=39.3

Q ss_pred             CCCCCCCCCeEEec-----CccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCCcccCCCCcee
Q psy14531        157 CEYPGEPQNGKIIP-----LKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDGTWSLDIPHCT  217 (222)
Q Consensus       157 C~~p~~~~~g~~~~-----~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G~W~~~~p~C~  217 (222)
                      |..|..+.+-....     ....|..|+.+.|.|.+||+-+..+.  ....|...| |+- .-+|.
T Consensus         2 ctipsrpinmkfknsvetdananynigdtieylclpgyrkqkmgp--iyakctgtg-wtl-fnqci   63 (64)
T d1g40a1           2 CTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGP--IYAKCTGTG-WTL-FNQCI   63 (64)
T ss_dssp             CCSCCCCSSCCEECSSCCCSSCCSSSCCEECEECCTTCEECSSCC--SCEECCSSS-CBS-CCCEE
T ss_pred             cccCCCccccccccceecccccccccccceeeeeccchhhhccCC--eeeEecccc-hHH-HHHhc
Confidence            55565555555442     24578999999999999998875532  678998655 874 34554

>d1g40a1 g.18.1.1 (A:1-64) Complement control protein {Vaccinia virus [TaxId: 10245]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Complement control protein
species: Vaccinia virus [TaxId: 10245]

Probab=95.86  E-value=0.025  Score=31.36  Aligned_cols=56  Identities=25%  Similarity=0.617  Sum_probs=39.5

Q ss_pred             CCCCCCCCCceEEeC---CCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCCeeeCCCCce
Q psy14531         96 CPVPALPLNGHLIED---PTGGPYRVGAILQFACNDRHHLL--GEETIVCTETGRWSRAPPRC  153 (222)
Q Consensus        96 C~~p~~~~~g~~~~~---~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g~Ws~~~p~C  153 (222)
                      |..|..|.|-.+...   .....|..|++++|-|..||+-.  |.-...|...| |+. ...|
T Consensus         2 ctipsrpinmkfknsvetdananynigdtieylclpgyrkqkmgpiyakctgtg-wtl-fnqc   62 (64)
T d1g40a1           2 CTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTG-WTL-FNQC   62 (64)
T ss_dssp             CCSCCCCSSCCEECSSCCCSSCCSSSCCEECEECCTTCEECSSCCSCEECCSSS-CBS-CCCE
T ss_pred             cccCCCccccccccceecccccccccccceeeeeccchhhhccCCeeeEecccc-hHH-HHHh
Confidence            444555556555432   22567899999999999999875  77788998655 876 4455

>d2b5id1 g.18.1.1 (D:1-64) Interleukin-2 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-2 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.018  Score=33.05  Aligned_cols=47  Identities=19%  Similarity=0.465  Sum_probs=37.1

Q ss_pred             CCCCCCCceEEeCCCCCCcCCCCEEEEEcCCCCEEc--CCCeEEeCcCC---eeeC
Q psy14531         98 VPALPLNGHLIEDPTGGPYRVGAILQFACNDRHHLL--GEETIVCTETG---RWSR  148 (222)
Q Consensus        98 ~p~~~~~g~~~~~~~~~~~~~g~~~~~~C~~gy~~~--g~~~~~C~~~g---~Ws~  148 (222)
                      .||.+.|+.+.    ...|..|+++...|..||+-+  |+..+.|..|.   .|+.
T Consensus         6 dPP~~~~AtFK----a~~YK~GTmLNCeCkrGFRRi~~gs~~M~C~GnsSHssWen   57 (64)
T d2b5id1           6 DPPEIPHATFK----AMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN   57 (64)
T ss_dssp             CCCCCTTEEEE----CSSBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC
T ss_pred             CCcccchhhee----eeeeccceeEeecccccceecCCCCeEEEEcCCCCCchhhc
Confidence            47777899887    567899999999999999875  67899998663   5876

>d2b5id1 g.18.1.1 (D:1-64) Interleukin-2 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Complement control module/SCR domain
superfamily: Complement control module/SCR domain
family: Complement control module/SCR domain
domain: Interleukin-2 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.10  E-value=0.085  Score=30.16  Aligned_cols=49  Identities=16%  Similarity=0.390  Sum_probs=35.8

Q ss_pred             CCCCCCCeEEecCccccCCCCeEEEEcCCCCeeccCCCCCCcceeCCCC---cccC
Q psy14531        159 YPGEPQNGKIIPLKFFYDPGDHIQVTCNDGYVKPLDITPTSGPYCQSDG---TWSL  211 (222)
Q Consensus       159 ~p~~~~~g~~~~~~~~~~~g~~v~y~C~~gy~~~~~~~~~~~~~C~~~G---~W~~  211 (222)
                      .|+.+.++...-  ..|++|+++.-.|+.||+...+++  ....|..|-   .|..
T Consensus         6 dPP~~~~AtFKa--~~YK~GTmLNCeCkrGFRRi~~gs--~~M~C~GnsSHssWen   57 (64)
T d2b5id1           6 DPPEIPHATFKA--MAYKEGTMLNCECKRGFRRIKSGS--LYMLCTGNSSHSSWDN   57 (64)
T ss_dssp             CCCCCTTEEEEC--SSBCTTCEEECCCCTTEEECTTCC--SEEEBC-----CCBSC
T ss_pred             CCcccchhheee--eeeccceeEeecccccceecCCCC--eEEEEcCCCCCchhhc
Confidence            566777887766  468899999999999999865533  578998553   4875

>d2joda1 g.76.1.1 (A:17-122) Pituitary adenylate cyclase-activating polypeptide type I receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Hormone receptor domain
superfamily: Hormone receptor domain
family: Hormone receptor domain
domain: Pituitary adenylate cyclase-activating polypeptide type I receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.97  E-value=0.28  Score=31.82  Aligned_cols=43  Identities=28%  Similarity=0.672  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCCCEEc------CCCeEEeCcCCeeeCCCCceeecCCCC
Q psy14531        117 RVGAILQFACNDRHHLL------GEETIVCTETGRWSRAPPRCKARCEYP  160 (222)
Q Consensus       117 ~~g~~~~~~C~~gy~~~------g~~~~~C~~~g~Ws~~~p~C~~~C~~p  160 (222)
                      ..|++|...|...|...      |..++.|..+| |+...|.=...|+..
T Consensus        52 ~~G~~v~~~CP~~~~~~~~~~~~g~~~R~C~~~G-Ws~~~p~y~~aC~~d  100 (106)
T d2joda1          52 HVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEPFPHYFDACGFD  100 (106)
T ss_dssp             BTTCCEEECCSCSSCCCSCCSCCSCEEECBCSSC-BCCCSSCCSSCSCSS
T ss_pred             CCCCEEEecCChhhcccCCcccCCeEEEecccCc-cCCCCCCcccccCCC
Confidence            55888889999765322      45688999999 998666333677753