Psyllid ID: psy14589

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-----
Protein Sequence
GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPWLL
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHccEEcccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHccccccccccccccccccccEEEcccccccccccccccccccccccccccccHHHHHcHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccccccccccccccccEEEEEEEccccccHHHHHHHHHHHcccEEEEEEccccccccccEEEEEEEcccccHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHHHHEcHHHHHHHHHHHHHHccEccEcccHHHHHHHHHHHcccEEEEcccEccHHHHHHHHcccEEEEcccccccccccccccccHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHcEEEEEEEEccHHcEHHHHHHHHHHcccccHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEcccccccccEEEEEEEcccHHHHHHHHHHHHHHcHEEEEcccccccccccccccEHHHHHHHHHHcccccHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccEccEcccHHHHHHHHHHHHccEEEEccccccHHHHHHHHcccEEEEcccccccccccccccccHHHHHHHcHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHccccccccHHHccEEEEEcccccHHHHHHHHHccEEEEEccccccccccccccccHHHHHHHHcHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHcHHHHccHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
geplprvdytaeeTKTWGEVFRNLTklypthackehnhvfplliqncgyaednipqLEDISKFLkdstgfslrpvagllsSRDFLAGLAFRVFhstqyirhpskplytpepdtLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYgseldadhpgftdpVYRARRKYFADLAFNYkhffffffffffffffffffyffffFFFFFYFFYFLLlsqpliqschscpfslfdFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMvecapggdlsSVIESLRSSCSYINIISrnhnqfhgvpwfprRIRELDRFANQILSYgseldadhpgftdpVYRARRKYFADLAFNYKhsillmpehnhvfplliqncgyaednipqLEDISKFLkdstgfslrpvagllsSRDFLAGLAFRVFhstqyirhpskplytpepdvchellghvplfadpsfaqfSQEIGlaslgapdEYVERLatsnnfmivprlaslspdstgfslrpvagllsSRDFLAGLAFRVFhstqyirhpskplytpepdvchellghvplfadpsfaqfSQEIGLaslgapylFYYVCHELlghvplfadpsfaqFSQEIGLaslgapwll
Flexible Loop (DISEMBL)
geplprvdytaeetktwgeVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSygseldadhpGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHnvnllhiesrsstrieNNYEFMVECAPGGDLSSVIESLRSSCSYINIISrnhnqfhgvPWFPRRIRELDRFANQILSygseldadhpgFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPWLL
Low Complexity Region (SEG)
GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHffffffffffffffffffyfffffffffyffyfLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPWLL
Disordered region (IsUnstruct)
**********AEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPW**
Disordered Region (DISOPRED)
GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLL*******************VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRS****ENNYEFMVECAPGGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRL***********LRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPWLL
Disordered Region (DISEMBL)
GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPWLL
Disordered Region (DISPRO)
*EPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPWLL
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGLASLGAPWLL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	655	2.2.26 [Sep-21-2011]
P17276	452	Protein henna OS=Drosophi	yes	N/A	0.377	0.546	0.672	1e-103
P04176	453	Phenylalanine-4-hydroxyla	yes	N/A	0.424	0.613	0.573	6e-92
P16331	453	Phenylalanine-4-hydroxyla	yes	N/A	0.424	0.613	0.573	8e-92
P00439	452	Phenylalanine-4-hydroxyla	yes	N/A	0.424	0.615	0.570	4e-90
Q2KIH7	451	Phenylalanine-4-hydroxyla	yes	N/A	0.424	0.616	0.554	4e-89
P90925	457	Probable phenylalanine-4-	yes	N/A	0.425	0.610	0.537	2e-87
P70080	445	Tryptophan 5-hydroxylase	no	N/A	0.392	0.577	0.546	3e-83
P17752	444	Tryptophan 5-hydroxylase	no	N/A	0.421	0.621	0.525	1e-80
Q92142	481	Tryptophan 5-hydroxylase	N/A	N/A	0.387	0.528	0.532	3e-80
P09810	444	Tryptophan 5-hydroxylase	no	N/A	0.425	0.628	0.520	9e-80

>sp|P17276|PH4H_DROME Protein henna OS=Drosophila melanogaster GN=Hn PE=2 SV=3

 Score =  377 bits (967), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/278 (67%), Positives = 213/278 (76%), Gaps = 31/278 (11%)

Query: 274 GALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC-APGGDLSSVIESLRSSCSYIN 332
           GALA  L +FKKH++NL+HIESRSS R+   YEF VE     G L   IE ++  CSY N
Sbjct: 46  GALANILAIFKKHDINLVHIESRSSLRVPG-YEFFVEADGKSGALGKAIEDVKEQCSYFN 104

Query: 333 IISRNH-NQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLA 391
           IISR++ +    VPWFPRRIR+LDRFANQILSYGSELDADHPGFTDP YR RRKYFAD+A
Sbjct: 105 IISRDYKDNATAVPWFPRRIRDLDRFANQILSYGSELDADHPGFTDPEYRKRRKYFADIA 164

Query: 392 FNYKHSILL----------------------------MPEHNHVFPLLIQNCGYAEDNIP 423
           +NYKH   L                              E+NHVFPLL+ NCG+ EDNIP
Sbjct: 165 YNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHACREYNHVFPLLVDNCGFREDNIP 224

Query: 424 QLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCH 483
           QLED+S FL+D TGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP+YTPEPDVCH
Sbjct: 225 QLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDVCH 284

Query: 484 ELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLAT 521
           EL+GHVPLFADP+FAQFSQEIGLASLGAPD+Y+E+L+T
Sbjct: 285 ELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLST 322

Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 6EC: .EC: 4

>sp|P04176|PH4H_RAT Phenylalanine-4-hydroxylase OS=Rattus norvegicus GN=Pah PE=1 SV=3

 Score =  338 bits (868), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 180/314 (57%), Positives = 221/314 (70%), Gaps = 36/314 (11%)

Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFM--VECAPGGDLSSVIESLRSS 327
           ++EVGALAK L+LF+++++NL HIESR S   ++ YEF   ++      L S+I+SLR+ 
Sbjct: 42  KEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSIIKSLRND 101

Query: 328 C-SYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKY 386
             + ++ +SR+  + + VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK 
Sbjct: 102 IGATVHELSRDKEK-NTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQ 160

Query: 387 FADLAFNYKHSILL----------------------------MPEHNHVFPLLIQNCGYA 418
           FAD+A+NY+H   +                              EHNH+FPLL + CG+ 
Sbjct: 161 FADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFR 220

Query: 419 EDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE 478
           EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPE
Sbjct: 221 EDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPE 280

Query: 479 PDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDS 538
           PD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L       
Sbjct: 281 PDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEGDSI 340

Query: 539 TGFSLRPVAGLLSS 552
             +     AGLLSS
Sbjct: 341 KAYG----AGLLSS 350

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 1

>sp|P16331|PH4H_MOUSE Phenylalanine-4-hydroxylase OS=Mus musculus GN=Pah PE=1 SV=4

 Score =  338 bits (867), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 180/314 (57%), Positives = 218/314 (69%), Gaps = 36/314 (11%)

Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD--LSSVIESLRSS 327
           ++EVGALAK L+LF+++ +NL HIESR S   ++ YEF           L S+I+SLR+ 
Sbjct: 42  KEEVGALAKVLRLFEENEINLTHIESRPSRLNKDEYEFFTYLDKRSKPVLGSIIKSLRND 101

Query: 328 C-SYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKY 386
             + ++ +SR+  + + VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK 
Sbjct: 102 IGATVHELSRDKEK-NTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQ 160

Query: 387 FADLAFNYKHSILL----------------------------MPEHNHVFPLLIQNCGYA 418
           FAD+A+NY+H   +                              EHNH+FPLL + CG+ 
Sbjct: 161 FADIAYNYRHGQPIPRVEYTEEERKTWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFR 220

Query: 419 EDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE 478
           EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPE
Sbjct: 221 EDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPE 280

Query: 479 PDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDS 538
           PD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L       
Sbjct: 281 PDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEGDSI 340

Query: 539 TGFSLRPVAGLLSS 552
             +     AGLLSS
Sbjct: 341 KAYG----AGLLSS 350

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 1

>sp|P00439|PH4H_HUMAN Phenylalanine-4-hydroxylase OS=Homo sapiens GN=PAH PE=1 SV=1

 Score =  333 bits (853), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 179/314 (57%), Positives = 218/314 (69%), Gaps = 36/314 (11%)

Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGG--DLSSVIESLRSS 327
           ++EVGALAK L+LF++++VNL HIESR S   ++ YEF           L+++I+ LR  
Sbjct: 42  KEEVGALAKVLRLFEENDVNLTHIESRPSRLKKDEYEFFTHLDKRSLPALTNIIKILRHD 101

Query: 328 C-SYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKY 386
             + ++ +SR+  +   VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK 
Sbjct: 102 IGATVHELSRDKKK-DTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQ 160

Query: 387 FADLAFNYKHS-----ILLMP-----------------------EHNHVFPLLIQNCGYA 418
           FAD+A+NY+H      +  M                        E+NH+FPLL + CG+ 
Sbjct: 161 FADIAYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFH 220

Query: 419 EDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE 478
           EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPE
Sbjct: 221 EDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPE 280

Query: 479 PDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDS 538
           PD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L       
Sbjct: 281 PDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSI 340

Query: 539 TGFSLRPVAGLLSS 552
             +     AGLLSS
Sbjct: 341 KAYG----AGLLSS 350

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 1

>sp|Q2KIH7|PH4H_BOVIN Phenylalanine-4-hydroxylase OS=Bos taurus GN=PAH PE=2 SV=1

 Score =  329 bits (844), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 174/314 (55%), Positives = 216/314 (68%), Gaps = 36/314 (11%)

Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGG--DLSSVIESLRSS 327
           ++EVGALA+ L+LF+++++NL HIESR S   ++ YEF           L+++I+ LR  
Sbjct: 41  KEEVGALARVLRLFEENDINLTHIESRPSRLRKDEYEFFTNLDQRSVPALANIIKILRHD 100

Query: 328 C-SYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKY 386
             + ++ +SR+  +   VPWFPR I+ELD FANQ+LSYG+ELDADHPGF DPVYRARRK 
Sbjct: 101 IGATVHELSRDKKK-DTVPWFPRTIQELDNFANQVLSYGAELDADHPGFKDPVYRARRKQ 159

Query: 387 FADLAFNYKHSILL----------------------------MPEHNHVFPLLIQNCGYA 418
           FAD+A+NY+H   +                              EHNH+FPLL + CG+ 
Sbjct: 160 FADIAYNYRHGQPIPRVEYTEEEKKTWGTVFRTLKSLYKTHACYEHNHIFPLLEKYCGFR 219

Query: 419 EDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE 478
           EDNIPQLE++S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPE
Sbjct: 220 EDNIPQLEEVSQFLQSCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPE 279

Query: 479 PDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDS 538
           PD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L       
Sbjct: 280 PDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSI 339

Query: 539 TGFSLRPVAGLLSS 552
             +     AGLLSS
Sbjct: 340 KAYG----AGLLSS 349

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 1

>sp|P90925|PH4H_CAEEL Probable phenylalanine-4-hydroxylase 1 OS=Caenorhabditis elegans GN=pah-1 PE=1 SV=2

 Score =  323 bits (829), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 171/318 (53%), Positives = 211/318 (66%), Gaps = 39/318 (12%)

Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD---LSSVIESLRS 326
           +++ GALA+TLKLF+ H+VNL HIESR S   E  YE +VE A   D   +  VIE  + 
Sbjct: 37  REKAGALAETLKLFQAHDVNLSHIESRPSKTHEGCYEVLVEFAEAEDHRKIEGVIEHFQQ 96

Query: 327 SCSYINII----SRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRA 382
                 ++    ++N      VPWFP++I ++D+FAN+ILSYG+ELDADHPGF D  YR 
Sbjct: 97  KAEKKVLVQDWNTKNKQNKDSVPWFPQKINDIDQFANRILSYGAELDADHPGFKDMTYRE 156

Query: 383 RRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQN 414
           RRK+FAD+AFN+KH                         ++ P     E N++FPLL QN
Sbjct: 157 RRKFFADIAFNFKHGDKIPTITYTDEEIATWRTVYNELTVMYPKNACQEFNYIFPLLQQN 216

Query: 415 CGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPL 474
           CG+  D IPQL+D+S FLKD TG+++RPVAGLLSSRDFLAGLAFRVFHSTQYIRH S P 
Sbjct: 217 CGFGPDRIPQLQDVSDFLKDCTGYTIRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSAPK 276

Query: 475 YTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASL 534
           YTPEPD+CHELLGHVPLFAD  FAQFSQEIGLASLGAPD+ +E+LAT   F I   +   
Sbjct: 277 YTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDVIEKLATLYWFTIEFGICQQ 336

Query: 535 SPDSTGFSLRPVAGLLSS 552
             +   +     AGLLSS
Sbjct: 337 DGEKKAYG----AGLLSS 350

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 1

>sp|P70080|TPH1_CHICK Tryptophan 5-hydroxylase 1 OS=Gallus gallus GN=TPH1 PE=1 SV=1

 Score =  310 bits (793), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 160/293 (54%), Positives = 197/293 (67%), Gaps = 36/293 (12%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD-LSSVIE 322
           +IFS  ++EVG L K LKLF++ +VNL+HIESR S R  + +E  V+C    + L+ + +
Sbjct: 20  IIFS-LKNEVGGLVKALKLFQEKHVNLVHIESRKSKRRNSEFEIFVDCDSNREQLNEIFQ 78

Query: 323 SLRSSCSYINIISRNH------NQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFT 376
            L+S  S +++    H           +PW+P++I +LD+ AN++L YGS+LDADHPGF 
Sbjct: 79  LLKSHVSIVSMNPTEHFNVQEDGDMENIPWYPKKISDLDKCANRVLMYGSDLDADHPGFK 138

Query: 377 DPVYRARRKYFADLAFNYKHSI-----------------------LLMPEHN-----HVF 408
           D VYR RRKYFADLA NYKH                          L P H         
Sbjct: 139 DNVYRKRRKYFADLAMNYKHGDPIPEIEFTEEEIKTWGTVYRELNKLYPTHACREYLKNL 198

Query: 409 PLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIR 468
           PLL + CGY EDNIPQLED+S+FLK+ TGF++RPVAG LS RDFLAGLAFRVFH TQY+R
Sbjct: 199 PLLTKYCGYREDNIPQLEDVSRFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVR 258

Query: 469 HPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLAT 521
           H S PLYTPEPD CHELLGHVPL A+PSFAQFSQEIGLASLGA DE V++LAT
Sbjct: 259 HSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASDEAVQKLAT 311

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 4

>sp|P17752|TPH1_HUMAN Tryptophan 5-hydroxylase 1 OS=Homo sapiens GN=TPH1 PE=1 SV=4

 Score =  301 bits (770), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/320 (52%), Positives = 201/320 (62%), Gaps = 44/320 (13%)

Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD-LSSVIESLRSSC 328
           ++EVG L K LK+F++ +VNLLHIESR S R  + +E  V+C    + L+ +   L+S  
Sbjct: 25  KNEVGGLIKALKIFQEKHVNLLHIESRKSKRRNSEFEIFVDCDINREQLNDIFHLLKS-- 82

Query: 329 SYINIISRN--------HNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVY 380
            + N++S N         +    VPWFP++I +LD  AN++L YGSELDADHPGF D VY
Sbjct: 83  -HTNVLSVNLPDNFTLKEDGMETVPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVY 141

Query: 381 RARRKYFADLAFNYKHSI-----------------------LLMPEHN-----HVFPLLI 412
           R RRKYFADLA NYKH                          L P H         PLL 
Sbjct: 142 RKRRKYFADLAMNYKHGDPIPKVEFTEEEIKTWGTVFQELNKLYPTHACREYLKNLPLLS 201

Query: 413 QNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSK 472
           + CGY EDNIPQLED+S FLK+ TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S 
Sbjct: 202 KYCGYREDNIPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSD 261

Query: 473 PLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLA 532
           P YTPEPD CHELLGHVPL A+PSFAQFSQEIGLASLGA +E V++LAT   F +   L 
Sbjct: 262 PFYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLC 321

Query: 533 SLSPDSTGFSLRPVAGLLSS 552
                   F     AGLLSS
Sbjct: 322 KQDGQLRVFG----AGLLSS 337

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 4

>sp|Q92142|TPH_XENLA Tryptophan 5-hydroxylase OS=Xenopus laevis GN=tph PE=2 SV=1

 Score =  300 bits (767), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 157/295 (53%), Positives = 199/295 (67%), Gaps = 41/295 (13%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD-LSSVIE 322
           VIFS  ++E+G L K LKLF++ +VNL+HIESR S R  + +E  V+C    + L+ + +
Sbjct: 57  VIFS-LKNEIGGLVKALKLFQEKHVNLIHIESRKSKRRNSEFEIFVDCDSNREQLNEIFQ 115

Query: 323 SLRSSCSYINIISRN--------HNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPG 374
            L+    ++N+IS +         +    VPWFP++I +LD+ AN++L YGS+LDADHPG
Sbjct: 116 LLK---PHVNVISMSPPENFTVQEDDMESVPWFPKKISDLDKCANRVLMYGSDLDADHPG 172

Query: 375 FTDPVYRARRKYFADLAFNYKHSI-----------------------LLMPEHN-----H 406
           F D VYR RRKYFAD+A +YK+                          L P H       
Sbjct: 173 FKDNVYRKRRKYFADVAMSYKYGDPIPHIEFTEEEIQTWGTVFRELNKLYPTHACREYLK 232

Query: 407 VFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQY 466
             PLL ++CGY EDNIPQLED+S+FL++ TGF++RPVAG LS RDFLAGLAFRVFH TQY
Sbjct: 233 NLPLLSKHCGYREDNIPQLEDVSRFLRERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQY 292

Query: 467 IRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLAT 521
           +RH S PL TPEPD CHELLGHVPL A+PSFAQFSQEIGLASLGA DE V++LAT
Sbjct: 293 VRHDSDPLNTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASDEAVQKLAT 347

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 4

>sp|P09810|TPH1_RAT Tryptophan 5-hydroxylase 1 OS=Rattus norvegicus GN=Tph1 PE=2 SV=2

 Score =  298 bits (763), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 202/317 (63%), Gaps = 38/317 (11%)

Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD-LSSVIESLRSSC 328
           ++EVG L K LK+F++++VNLLHIESR S R  + +E  V+C    + L+ +   L+S  
Sbjct: 25  KNEVGGLIKALKIFQENHVNLLHIESRKSKRRNSEFEIFVDCDINREQLNDIFPLLKSHT 84

Query: 329 SYINIIS-----RNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRAR 383
           + +++ S        +    VPWFP++I +LD  AN++L YGSELDADHPGF D VYR R
Sbjct: 85  TVLSVDSPDQLPEKEDVMETVPWFPKKISDLDFCANRVLLYGSELDADHPGFKDNVYRRR 144

Query: 384 RKYFADLAFNYKHSI-----------------------LLMPEHN-----HVFPLLIQNC 415
           RKYFA+LA NYKH                          L P H         PLL + C
Sbjct: 145 RKYFAELAMNYKHGDPIPKIEFTEEEIKTWGTIFRELNKLYPTHACREYLRNLPLLSKYC 204

Query: 416 GYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLY 475
           GY EDN+PQLED+S FLK+ TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S PLY
Sbjct: 205 GYREDNVPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPLY 264

Query: 476 TPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLS 535
           TPEPD CHELLGHVPL A+PSFAQFSQEIGLASLGA +E V++LAT   F +   L    
Sbjct: 265 TPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEETVQKLATCYFFTVEFGLCKQD 324

Query: 536 PDSTGFSLRPVAGLLSS 552
                F     AGLLSS
Sbjct: 325 GQLRVFG----AGLLSS 337

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 6

EC: .

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	655
242017617	433	tyrosine/tryptophan monooxygenase, putat	0.435	0.658	0.698	1e-117
307168571	439	Protein henna [Camponotus floridanus]	0.435	0.649	0.677	1e-114
66501322	463	PREDICTED: protein henna-like isoform 2	0.435	0.615	0.686	1e-114
380013058	464	PREDICTED: protein henna-like [Apis flor	0.435	0.614	0.677	1e-113
389885660	447	phenylalanine hydroxylase [Polyrhachis v	0.435	0.637	0.667	1e-112
340719082	494	PREDICTED: protein henna-like [Bombus te	0.435	0.576	0.670	1e-112
350423313	464	PREDICTED: protein henna-like [Bombus im	0.435	0.614	0.670	1e-112
332021702	461	Protein henna [Acromyrmex echinatior]	0.442	0.629	0.657	1e-112
156552627	459	PREDICTED: protein henna-like [Nasonia v	0.435	0.620	0.667	1e-112
383859706	464	PREDICTED: protein henna-like [Megachile	0.435	0.614	0.658	1e-111

>gi|242017617|ref|XP_002429284.1| tyrosine/tryptophan monooxygenase, putative [Pediculus humanus corporis] gi|212514180|gb|EEB16546.1| tyrosine/tryptophan monooxygenase, putative [Pediculus humanus corporis]

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/318 (69%), Positives = 245/318 (77%), Gaps = 33/318 (10%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIES 323
           +IFS  +DEVGALAK LK+F+K  VNLLHIESRSS+R  N YEFMVECAPGG+LS+ IE+
Sbjct: 19  LIFSPKEDEVGALAKALKMFEKQKVNLLHIESRSSSRFTNQYEFMVECAPGGNLSAAIET 78

Query: 324 LRSSCSYINIISRNHNQFHG-VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRA 382
           LR  CSY +IISRNH      VPWFPRRIR+LD+FANQILSYGSELD+DHPGFTDPVYRA
Sbjct: 79  LRQHCSYFSIISRNHKDNQDTVPWFPRRIRDLDKFANQILSYGSELDSDHPGFTDPVYRA 138

Query: 383 RRKYFADLAFNYKHS-----------------------ILLMPEH-----NHVFPLLIQN 414
           RRKYFAD+A+NYKH                        + L P H     NHVFPLLI+N
Sbjct: 139 RRKYFADIAYNYKHGEPLPRVDYTEEETKTWGTVFKELVKLYPTHACREYNHVFPLLIEN 198

Query: 415 CGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPL 474
           CGY EDNIPQLEDISKFLKDSTGF+LRPVAGLL+SRDFLAGLAFRVFHSTQYIRH S PL
Sbjct: 199 CGYREDNIPQLEDISKFLKDSTGFTLRPVAGLLASRDFLAGLAFRVFHSTQYIRHHSCPL 258

Query: 475 YTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASL 534
           YTPEPDVCHELLGHVPLFADP+FAQFSQEIGLASLGAPD+YVE+LAT   F +   L S 
Sbjct: 259 YTPEPDVCHELLGHVPLFADPAFAQFSQEIGLASLGAPDDYVEKLATCYWFTVEFGLCSQ 318

Query: 535 SPDSTGFSLRPVAGLLSS 552
                 +     AGLLSS
Sbjct: 319 DGHLKAYG----AGLLSS 332

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307168571|gb|EFN61629.1| Protein henna [Camponotus floridanus]

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/319 (67%), Positives = 242/319 (75%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +DE+G+L + L+LF KH VNLLHIESRSS R  N YEFMVECAPGG+++S IE
Sbjct: 22  LIFSPTEEDEIGSLGRYLQLFAKHKVNLLHIESRSSLRQSNGYEFMVECAPGGNIASAIE 81

Query: 323 SLRSSCSYINIISRNH-NQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
           SLR  CSY +IISRNH +    VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 82  SLRDQCSYFSIISRNHKDNIDTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 141

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
            RRKYFAD+A+NYKH                          L P     EHNHVFPLLI+
Sbjct: 142 KRRKYFADIAYNYKHGQPIPRVDYTSEEIATWGVVFKNLTKLYPKYACREHNHVFPLLIE 201

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY EDNIPQLEDIS FLKDSTGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH SKP
Sbjct: 202 NCGYREDNIPQLEDISNFLKDSTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHSSKP 261

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPDVCHE+LGHVPL ADPSFAQFSQ IGLASLGAPD+Y+E+LAT   F +   L  
Sbjct: 262 LYTPEPDVCHEILGHVPLLADPSFAQFSQVIGLASLGAPDDYIEKLATCFWFTVEYGLCR 321

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   F     AGLLSS
Sbjct: 322 QNGELKAFG----AGLLSS 336

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66501322|ref|XP_623300.1| PREDICTED: protein henna-like isoform 2 [Apis mellifera]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/319 (68%), Positives = 240/319 (75%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +D VGALA+ LKLF ++ VNLLHIESRSS R  N YEFMVECAP GDL SVIE
Sbjct: 46  LIFSPKEEDSVGALARYLKLFTEYEVNLLHIESRSSLRQPNVYEFMVECAPDGDLGSVIE 105

Query: 323 SLRSSCSYINIISRNHNQFHG-VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
            LR  CSY +IISRNHN   G VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 106 KLREQCSYFSIISRNHNDNMGTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 165

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
            RRKYFAD+A+NYKH                          L P     EHNHVFPLLI+
Sbjct: 166 QRRKYFADIAYNYKHGQPIPRVKYTKEEIETWGMVFRNLTKLYPKYACKEHNHVFPLLIE 225

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY EDNIPQLEDIS FLKD TGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH SKP
Sbjct: 226 NCGYREDNIPQLEDISNFLKDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHSSKP 285

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPDVCHE+LGHVPLFADPSFAQF Q +GLASLGAPDEYVE+LAT   F +   L  
Sbjct: 286 LYTPEPDVCHEVLGHVPLFADPSFAQFCQVVGLASLGAPDEYVEKLATCFWFTVEYGLCR 345

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   +     AGLLSS
Sbjct: 346 QNGELKAYG----AGLLSS 360

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013058|ref|XP_003690587.1| PREDICTED: protein henna-like [Apis florea]

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/319 (67%), Positives = 240/319 (75%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +D VGALA+ LKLF ++ VNLLHIESRSS R  N YEFMVECAP GDL SVIE
Sbjct: 47  LIFSPKEEDSVGALARYLKLFTEYEVNLLHIESRSSLRQPNVYEFMVECAPDGDLGSVIE 106

Query: 323 SLRSSCSYINIISRNHNQFHG-VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
            LR  CSY +IISRN+N   G VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 107 KLREQCSYFSIISRNYNDNMGTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 166

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
            RRKYFAD+A+NYKH                          L P     EHNHVFPLLI+
Sbjct: 167 QRRKYFADIAYNYKHGQPIPRVEYTKEEVETWGTVFRNLTKLYPKYACKEHNHVFPLLIE 226

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY EDNIPQLEDIS FLKD TGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH SKP
Sbjct: 227 NCGYREDNIPQLEDISNFLKDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHSSKP 286

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPD+CHE+LGHVPLFADPSFAQF Q +GLASLGAPDEY+E+LAT   F +   L  
Sbjct: 287 LYTPEPDICHEVLGHVPLFADPSFAQFCQVVGLASLGAPDEYIEKLATCFWFTVEYGLCR 346

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   +     AGLLSS
Sbjct: 347 QNGELKAYG----AGLLSS 361

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389885660|gb|AFL02790.1| phenylalanine hydroxylase [Polyrhachis vicina]

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/319 (66%), Positives = 243/319 (76%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +DEVG+L + L+LF KH VNLLHIESRSS R  N+YEFMVECAPGG+++S IE
Sbjct: 30  LIFSPTEEDEVGSLGRYLQLFAKHKVNLLHIESRSSLRQPNSYEFMVECAPGGNIASAIE 89

Query: 323 SLRSSCSYINIISRNH-NQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
           SLR  C+Y +IISRNH +    VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 90  SLRDQCNYFSIISRNHKDNIDTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 149

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
            RRKYFAD+A++YKH                          L P     EHNHVFPLLI+
Sbjct: 150 KRRKYFADIAYHYKHGQPIPRVDYTPEETATWGVVFRNLTKLYPKYACREHNHVFPLLIE 209

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY E+NIPQLEDIS FLKDSTGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH SKP
Sbjct: 210 NCGYRENNIPQLEDISNFLKDSTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHNSKP 269

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPDVCHE+LGHVPL ADPSFAQFSQ IGLASLGAPD+Y+E+LAT   F +   L  
Sbjct: 270 LYTPEPDVCHEILGHVPLLADPSFAQFSQVIGLASLGAPDDYIEKLATCFWFTVEYGLCR 329

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   +     AGLLSS
Sbjct: 330 QNGELKAYG----AGLLSS 344

Source: Polyrhachis vicina

Species: Polyrhachis vicina

Genus: Polyrhachis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719082|ref|XP_003397986.1| PREDICTED: protein henna-like [Bombus terrestris]

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/319 (67%), Positives = 237/319 (74%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +D VGAL+K LKLF +H VNL HIESRSS R  N YEFMVEC PGGDL +VIE
Sbjct: 77  LIFSPKEEDSVGALSKYLKLFAEHKVNLSHIESRSSLRRTNMYEFMVECVPGGDLGTVIE 136

Query: 323 SLRSSCSYINIISRNHNQFHG-VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
            LR  CSY +IISRNH    G VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 137 KLREQCSYFSIISRNHKDNMGTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 196

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
            RRKYFADLAFNYK+                          L P     EHNHVFPLLI+
Sbjct: 197 QRRKYFADLAFNYKYGQSIPRVEYTKEEIETWGVVFRNLTKLYPKYACKEHNHVFPLLIE 256

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY EDNIPQLEDIS FLKD TGF+LRPVAGLLSSRDFLAGLAFRVFH TQYIRH SKP
Sbjct: 257 NCGYREDNIPQLEDISNFLKDCTGFTLRPVAGLLSSRDFLAGLAFRVFHCTQYIRHGSKP 316

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPD+CHE+LGHVPLFADPSFAQF Q +GLASLG+PDEY+E+LAT   F +   L  
Sbjct: 317 LYTPEPDICHEVLGHVPLFADPSFAQFCQVVGLASLGSPDEYIEKLATCFWFTVEYGLCQ 376

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   +     AGLLSS
Sbjct: 377 QNGELKAYG----AGLLSS 391

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423313|ref|XP_003493441.1| PREDICTED: protein henna-like [Bombus impatiens]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/319 (67%), Positives = 237/319 (74%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +D VGAL+K LKLF +H VNL HIESRSS R  N YEFMVEC PGGDL +VIE
Sbjct: 47  LIFSLKEEDSVGALSKYLKLFAEHKVNLSHIESRSSLRRANMYEFMVECVPGGDLGTVIE 106

Query: 323 SLRSSCSYINIISRNHNQFHG-VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
            LR  CSY +IISRNH    G VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 107 KLRQQCSYFSIISRNHKDNMGTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 166

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
            RRKYFADLAFNYK+                          L P     EHNHVFPLLI+
Sbjct: 167 QRRKYFADLAFNYKYGQPIPRVEYTKQEIETWGVVFRNLTKLYPKYACKEHNHVFPLLIE 226

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY EDNIPQLEDIS FLKD TGF+LRPVAGLLSSRDFLAGLAFRVFH TQYIRH SKP
Sbjct: 227 NCGYREDNIPQLEDISNFLKDCTGFTLRPVAGLLSSRDFLAGLAFRVFHCTQYIRHGSKP 286

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPD+CHE+LGHVPLFADPSFAQF Q +GLASLG+PDEY+E+LAT   F +   L  
Sbjct: 287 LYTPEPDICHEVLGHVPLFADPSFAQFCQVVGLASLGSPDEYIEKLATCFWFTVEYGLCQ 346

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   +     AGLLSS
Sbjct: 347 QNGELKAYG----AGLLSS 361

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021702|gb|EGI62058.1| Protein henna [Acromyrmex echinatior]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/324 (65%), Positives = 245/324 (75%), Gaps = 34/324 (10%)

Query: 259 SLFDFVIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDL 317
           S F  +IFS   +DEVG+L K L+LF KH VNLLHIESRSS R  NNYEFMV+CAP G++
Sbjct: 39  SAFTCLIFSPKEEDEVGSLGKYLQLFVKHKVNLLHIESRSSLRRPNNYEFMVDCAPSGNI 98

Query: 318 SSVIESLRSSCSYINIISRNH-NQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFT 376
           +SVIE+L+  CSY +IIS +H +  + VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFT
Sbjct: 99  ASVIEALQDQCSYFSIISSDHKDNMNTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFT 158

Query: 377 DPVYRARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVF 408
           DPVYR RRK+FAD+A++YKH                          L P     EHNHVF
Sbjct: 159 DPVYRKRRKFFADIAYHYKHGQPIPKVEYTPEEIATWGVIFKNLTKLYPKYACREHNHVF 218

Query: 409 PLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIR 468
           PLLI+NCGY EDNIPQLEDIS FLKDSTGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIR
Sbjct: 219 PLLIENCGYREDNIPQLEDISNFLKDSTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIR 278

Query: 469 HPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIV 528
           H SKPLYTPEPDVCHE+LGHVPL ADPSFAQFSQ IGLASLGAPDEY+E+LAT   F + 
Sbjct: 279 HSSKPLYTPEPDVCHEILGHVPLLADPSFAQFSQVIGLASLGAPDEYIEKLATCFWFTVE 338

Query: 529 PRLASLSPDSTGFSLRPVAGLLSS 552
             +   + +   +     AGLLSS
Sbjct: 339 YGICRQNGELKAYG----AGLLSS 358

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156552627|ref|XP_001600555.1| PREDICTED: protein henna-like [Nasonia vitripennis]

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/319 (66%), Positives = 242/319 (75%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +DEVGAL + L+LF K+ VNLLHIESRSS R  N YEFMVECAPGG+L +V+E
Sbjct: 42  LIFSPKEEDEVGALGRYLQLFAKYEVNLLHIESRSSLRQANGYEFMVECAPGGNLGAVVE 101

Query: 323 SLRSSCSYINIISRNHNQFHG-VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
           +L+  C Y +IISRN+    G VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 102 ALQEQCGYFSIISRNYRDNMGTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 161

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
           ARRKYFADLA++YKH                          L P     EHNHVFPLLI+
Sbjct: 162 ARRKYFADLAYHYKHGQPIPRVDYTEEEIKTWGTVFKKLTELYPKFACREHNHVFPLLIE 221

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY EDNIPQLEDIS FLKD TGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH S+P
Sbjct: 222 NCGYREDNIPQLEDISNFLKDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHSSRP 281

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPDVCHE+LGHVPLFADP+FAQFSQ IGLASLGAPDEY+E+LAT   F +   L  
Sbjct: 282 LYTPEPDVCHEVLGHVPLFADPAFAQFSQVIGLASLGAPDEYIEKLATCFWFTVEFGLCR 341

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   +     AGLLSS
Sbjct: 342 QNGELKAYG----AGLLSS 356

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859706|ref|XP_003705333.1| PREDICTED: protein henna-like [Megachile rotundata]

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/319 (65%), Positives = 240/319 (75%), Gaps = 34/319 (10%)

Query: 264 VIFS-NHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322
           +IFS   +D VGAL + L+LF +H VNLLHIESRSS R  + YEFMVECAPGG+L +VIE
Sbjct: 47  LIFSPADEDSVGALGRYLQLFAEHEVNLLHIESRSSLRHASTYEFMVECAPGGNLGAVIE 106

Query: 323 SLRSSCSYINIISRNHNQFHG-VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
           +LR  C+Y ++ISRNH    G VPWFPRRIR+LD+FANQILSYG+ELD+DHPGFTDPVYR
Sbjct: 107 NLRKQCTYFSVISRNHKDNMGTVPWFPRRIRDLDKFANQILSYGAELDSDHPGFTDPVYR 166

Query: 382 ARRKYFADLAFNYKHS-----------------------ILLMP-----EHNHVFPLLIQ 413
            RRKYFAD+A+NYKH                          L P     EHNHVFPLLI+
Sbjct: 167 QRRKYFADIAYNYKHGQPIPRVEYTKEEIETWGVVFRNLTKLYPKYACKEHNHVFPLLIE 226

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
           NCGY EDNIPQLEDIS FLKDSTGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH SKP
Sbjct: 227 NCGYREDNIPQLEDISNFLKDSTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHSSKP 286

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLAS 533
           LYTPEPDVCHE+LGH PLFADP+FAQF Q +GLASLGAPDEY+E+LAT   F +   +  
Sbjct: 287 LYTPEPDVCHEVLGHAPLFADPAFAQFCQVVGLASLGAPDEYIEKLATCFWFTVEYGICR 346

Query: 534 LSPDSTGFSLRPVAGLLSS 552
            + +   +     AGLLSS
Sbjct: 347 QNGELKAYG----AGLLSS 361

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	655
UNIPROTKB|Q6PKI8	446	PAH "Phenylalanine hydroxylase	0.221	0.325	0.754	4.9e-91
ZFIN|ZDB-GENE-031006-2	449	pah "phenylalanine hydroxylase	0.222	0.325	0.726	4.4e-90
RGD|3248	453	Pah "phenylalanine hydroxylase	0.221	0.320	0.715	1.5e-89
MGI|MGI:97473	453	Pah "phenylalanine hydroxylase	0.221	0.320	0.715	1.9e-89
UNIPROTKB|J3KND8	447	PAH "Phenylalanine-4-hydroxyla	0.222	0.326	0.7	9.1e-88
UNIPROTKB|P00439	452	PAH "Phenylalanine-4-hydroxyla	0.222	0.323	0.7	9.1e-88
UNIPROTKB|E2R366	451	PAH "Uncharacterized protein"	0.222	0.323	0.7	1.5e-87
UNIPROTKB|F6XY00	581	PAH "Uncharacterized protein"	0.222	0.251	0.7	1.5e-87
WB|WBGene00000240	457	pah-1 [Caenorhabditis elegans	0.262	0.376	0.601	2.2e-84
UNIPROTKB|P90925	457	pah-1 "Probable phenylalanine-	0.262	0.376	0.601	2.2e-84

UNIPROTKB|Q6PKI8 PAH "Phenylalanine hydroxylase" [Gallus gallus (taxid:9031)]

 Score = 567 (204.7 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
 Identities = 114/151 (75%), Positives = 125/151 (82%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             EHNHVFPLL + CGY EDNIPQLED+SKFL+  TGF LRPVAGLLSSRDFLAGLAFRVFH
Sbjct:   199 EHNHVFPLLEKYCGYREDNIPQLEDVSKFLQTCTGFRLRPVAGLLSSRDFLAGLAFRVFH 258

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
             STQYIRH SKP+YTPEPD+CHELLGHVPLFADPSFAQFSQEIGLASLGAPD+++E+LAT 
Sbjct:   259 STQYIRHASKPMYTPEPDICHELLGHVPLFADPSFAQFSQEIGLASLGAPDDFIEKLATV 318

Query:   523 NNFMIVPRLASLSPDSTGFSLRPV-AGLLSS 552
               F +   L        G SL+   AGLLSS
Sbjct:   319 YWFTVEFGLCK-----EGDSLKAYGAGLLSS 344

GO:0005506 "iron ion binding" evidence=IEA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=IEA

ZFIN|ZDB-GENE-031006-2 pah "phenylalanine hydroxylase" [Danio rerio (taxid:7955)]

 Score = 551 (199.0 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
 Identities = 109/150 (72%), Positives = 121/150 (80%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             EHN VFPLL + CGY EDNIPQLEDIS +L+  TGF LRPVAGLLSSRDFLAGLAFRVFH
Sbjct:   203 EHNRVFPLLEKYCGYREDNIPQLEDISHYLQSCTGFRLRPVAGLLSSRDFLAGLAFRVFH 262

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
             STQYIRH SKP+YTPEPD+CHELLGHVPLFADP+FAQFSQEIGLASLGAPDE++E+LAT 
Sbjct:   263 STQYIRHSSKPMYTPEPDICHELLGHVPLFADPNFAQFSQEIGLASLGAPDEFIEKLATV 322

Query:   523 NNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
               F +   L     +   +     AGLLSS
Sbjct:   323 YWFTVEFGLCKQGNEVKAYG----AGLLSS 348

GO:0016714 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=IEA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0004497 "monooxygenase activity" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=IDA

RGD|3248 Pah "phenylalanine hydroxylase" [Rattus norvegicus (taxid:10116)]

 Score = 541 (195.5 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
 Identities = 108/151 (71%), Positives = 122/151 (80%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             EHNH+FPLL + CG+ EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH
Sbjct:   205 EHNHIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFH 264

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
              TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT 
Sbjct:   265 CTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATI 324

Query:   523 NNFMIVPRLASLSPDSTGFSLRPV-AGLLSS 552
               F +   L        G S++   AGLLSS
Sbjct:   325 YWFTVEFGLCK-----EGDSIKAYGAGLLSS 350

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=IEA;ISO;IDA

GO:0005506 "iron ion binding" evidence=IEA;IDA

GO:0006558 "L-phenylalanine metabolic process" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0006571 "tyrosine biosynthetic process" evidence=IDA

GO:0016597 "amino acid binding" evidence=IEA;IDA

GO:0018126 "protein hydroxylation" evidence=IDA

GO:0042558 "pteridine-containing compound metabolic process" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0046146 "tetrahydrobiopterin metabolic process" evidence=IDA

GO:0048037 "cofactor binding" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=ISO

MGI|MGI:97473 Pah "phenylalanine hydroxylase" [Mus musculus (taxid:10090)]

 Score = 541 (195.5 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
 Identities = 108/151 (71%), Positives = 122/151 (80%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             EHNH+FPLL + CG+ EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH
Sbjct:   205 EHNHIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFH 264

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
              TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT 
Sbjct:   265 CTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATI 324

Query:   523 NNFMIVPRLASLSPDSTGFSLRPV-AGLLSS 552
               F +   L        G S++   AGLLSS
Sbjct:   325 YWFTVEFGLCK-----EGDSIKAYGAGLLSS 350

GO:0003824 "catalytic activity" evidence=IEA

GO:0004497 "monooxygenase activity" evidence=IEA

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=ISO;IMP

GO:0005506 "iron ion binding" evidence=ISO

GO:0006558 "L-phenylalanine metabolic process" evidence=ISO

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0006571 "tyrosine biosynthetic process" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=ISO

GO:0016714 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen" evidence=IEA

GO:0018126 "protein hydroxylation" evidence=ISO

GO:0042558 "pteridine-containing compound metabolic process" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0046146 "tetrahydrobiopterin metabolic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048037 "cofactor binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IMP

UNIPROTKB|J3KND8 PAH "Phenylalanine-4-hydroxylase" [Homo sapiens (taxid:9606)]

 Score = 534 (193.0 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
 Identities = 105/150 (70%), Positives = 119/150 (79%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             E+NH+FPLL + CG+ EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH
Sbjct:   200 EYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFH 259

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
              TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT 
Sbjct:   260 CTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATI 319

Query:   523 NNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
               F +   L         +     AGLLSS
Sbjct:   320 YWFTVEFGLCKQGDSIKAYG----AGLLSS 345

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

UNIPROTKB|P00439 PAH "Phenylalanine-4-hydroxylase" [Homo sapiens (taxid:9606)]

 Score = 534 (193.0 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
 Identities = 105/150 (70%), Positives = 119/150 (79%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             E+NH+FPLL + CG+ EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH
Sbjct:   205 EYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFH 264

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
              TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT 
Sbjct:   265 CTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATI 324

Query:   523 NNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
               F +   L         +     AGLLSS
Sbjct:   325 YWFTVEFGLCKQGDSIKAYG----AGLLSS 350

GO:0005506 "iron ion binding" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA;TAS

GO:0008652 "cellular amino acid biosynthetic process" evidence=TAS

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=EXP

GO:0005829 "cytosol" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0042136 "neurotransmitter biosynthetic process" evidence=NAS

GO:0042423 "catecholamine biosynthetic process" evidence=NAS

UNIPROTKB|E2R366 PAH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 537 (194.1 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
 Identities = 105/150 (70%), Positives = 119/150 (79%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             EHNH+FPLL + CG+ EDNIPQLE++S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH
Sbjct:   204 EHNHIFPLLEKYCGFREDNIPQLEEVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFH 263

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
              TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT 
Sbjct:   264 CTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATI 323

Query:   523 NNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
               F +   L         +     AGLLSS
Sbjct:   324 YWFTVEFGLCKQGDSIKAYG----AGLLSS 349

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|F6XY00 PAH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 537 (194.1 bits), Expect = 1.5e-87, Sum P(2) = 1.5e-87
 Identities = 105/150 (70%), Positives = 119/150 (79%)

Query:   403 EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFH 462
             EHNH+FPLL + CG+ EDNIPQLE++S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH
Sbjct:   334 EHNHIFPLLEKYCGFREDNIPQLEEVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFH 393

Query:   463 STQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522
              TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT 
Sbjct:   394 CTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATI 453

Query:   523 NNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
               F +   L         +     AGLLSS
Sbjct:   454 YWFTVEFGLCKQGDSIKAYG----AGLLSS 479

GO:0016597 "amino acid binding" evidence=IEA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=IEA

WB|WBGene00000240 pah-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 524 (189.5 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
 Identities = 107/178 (60%), Positives = 126/178 (70%)

Query:   375 FTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKD 434
             +TD      R  + +L   Y  +     E N++FPLL QNCG+  D IPQL+D+S FLKD
Sbjct:   179 YTDEEIATWRTVYNELTVMYPKNAC--QEFNYIFPLLQQNCGFGPDRIPQLQDVSDFLKD 236

Query:   435 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 494
              TG+++RPVAGLLSSRDFLAGLAFRVFHSTQYIRH S P YTPEPD+CHELLGHVPLFAD
Sbjct:   237 CTGYTIRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSAPKYTPEPDICHELLGHVPLFAD 296

Query:   495 PSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
               FAQFSQEIGLASLGAPD+ +E+LAT   F I   +     +   +     AGLLSS
Sbjct:   297 VEFAQFSQEIGLASLGAPDDVIEKLATLYWFTIEFGICQQDGEKKAYG----AGLLSS 350

GO:0004505 "phenylalanine 4-monooxygenase activity" evidence=IEA;IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IEA;IDA

GO:0004497 "monooxygenase activity" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0009072 "aromatic amino acid family metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0016714 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006569 "tryptophan catabolic process" evidence=IDA

GO:0000003 "reproduction" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IGI;IMP

GO:0040002 "collagen and cuticulin-based cuticle development" evidence=IGI

GO:0042438 "melanin biosynthetic process" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0004510 "tryptophan 5-monooxygenase activity" evidence=IDA

GO:0006571 "tyrosine biosynthetic process" evidence=IDA

UNIPROTKB|P90925 pah-1 "Probable phenylalanine-4-hydroxylase 1" [Caenorhabditis elegans (taxid:6239)]

 Score = 524 (189.5 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
 Identities = 107/178 (60%), Positives = 126/178 (70%)

Query:   375 FTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKD 434
             +TD      R  + +L   Y  +     E N++FPLL QNCG+  D IPQL+D+S FLKD
Sbjct:   179 YTDEEIATWRTVYNELTVMYPKNAC--QEFNYIFPLLQQNCGFGPDRIPQLQDVSDFLKD 236

Query:   435 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 494
              TG+++RPVAGLLSSRDFLAGLAFRVFHSTQYIRH S P YTPEPD+CHELLGHVPLFAD
Sbjct:   237 CTGYTIRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSAPKYTPEPDICHELLGHVPLFAD 296

Query:   495 PSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
               FAQFSQEIGLASLGAPD+ +E+LAT   F I   +     +   +     AGLLSS
Sbjct:   297 VEFAQFSQEIGLASLGAPDDVIEKLATLYWFTIEFGICQQDGEKKAYG----AGLLSS 350

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2KIH7	PH4H_BOVIN	1, ., 1, 4, ., 1, 6, ., 1	0.5541	0.4244	0.6164	yes	N/A
P16331	PH4H_MOUSE	1, ., 1, 4, ., 1, 6, ., 1	0.5732	0.4244	0.6136	yes	N/A
P04176	PH4H_RAT	1, ., 1, 4, ., 1, 6, ., 1	0.5732	0.4244	0.6136	yes	N/A
P00439	PH4H_HUMAN	1, ., 1, 4, ., 1, 6, ., 1	0.5700	0.4244	0.6150	yes	N/A
P90925	PH4H_CAEEL	1, ., 1, 4, ., 1, 6, ., 1	0.5377	0.4259	0.6105	yes	N/A
P17276	PH4H_DROME	1, ., 1, 4, ., 1, 6, ., 4	0.6726	0.3770	0.5464	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.16	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	655
TIGR01268	436	TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydrox	1e-143
cd03347	306	cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydr	1e-114
pfam00351	306	pfam00351, Biopterin_H, Biopterin-dependent aromat	1e-105
TIGR01270	464	TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenas	1e-103
cd03346	287	cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxyla	2e-94
TIGR01269	457	TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase,	5e-83
cd03345	298	cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase	4e-82
cd03347	306	cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydr	2e-69
TIGR01268	436	TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydrox	1e-67
pfam00351	306	pfam00351, Biopterin_H, Biopterin-dependent aromat	3e-65
cd03346	287	cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxyla	1e-59
cd00361	221	cd00361, arom_aa_hydroxylase, Biopterin-dependent	4e-57
TIGR01270	464	TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenas	7e-56
cd03345	298	cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase	1e-54
cd03347	306	cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydr	1e-50
cd00361	221	cd00361, arom_aa_hydroxylase, Biopterin-dependent	4e-50
TIGR01268	436	TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydrox	4e-49
TIGR01269	457	TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase,	8e-48
pfam00351	306	pfam00351, Biopterin_H, Biopterin-dependent aromat	4e-47
cd03346	287	cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxyla	8e-45
cd00361	221	cd00361, arom_aa_hydroxylase, Biopterin-dependent	2e-43
TIGR01270	464	TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenas	7e-43
cd03345	298	cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase	3e-42
TIGR01269	457	TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase,	9e-38
PRK11913	275	PRK11913, phhA, phenylalanine 4-monooxygenase; Rev	4e-28
PRK11913	275	PRK11913, phhA, phenylalanine 4-monooxygenase; Rev	3e-25
TIGR01268	436	TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydrox	6e-24
cd04904	74	cd04904, ACT_AAAH, ACT domain of the nonheme iron-	3e-23
cd03347	306	cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydr	1e-22
PRK11913	275	PRK11913, phhA, phenylalanine 4-monooxygenase; Rev	2e-22
cd03348	228	cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hy	2e-21
pfam00351	306	pfam00351, Biopterin_H, Biopterin-dependent aromat	2e-20
COG3186	291	COG3186, COG3186, Phenylalanine-4-hydroxylase [Ami	2e-17
cd03346	287	cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxyla	4e-17
cd03348	228	cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hy	4e-17
cd03348	228	cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hy	8e-17
TIGR01270	464	TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenas	1e-16
TIGR01267	248	TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydrox	8e-15
cd04880	75	cd04880, ACT_AAAH-PDT-like, ACT domain of the nonh	4e-14
cd04931	90	cd04931, ACT_PAH, ACT domain of the nonheme iron-d	7e-13
COG3186	291	COG3186, COG3186, Phenylalanine-4-hydroxylase [Ami	4e-12
cd04929	74	cd04929, ACT_TPH, ACT domain of the nonheme iron-d	6e-12
COG3186	291	COG3186, COG3186, Phenylalanine-4-hydroxylase [Ami	1e-11
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	4e-11
cd03345	298	cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase	6e-11
TIGR01267	248	TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydrox	1e-09
TIGR01267	248	TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydrox	2e-09
TIGR01269	457	TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase,	3e-09
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-09
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	5e-08
PRK14055	362	PRK14055, PRK14055, aromatic amino acid hydroxylas	3e-07
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	4e-07
cd02116	60	cd02116, ACT, ACT domains are commonly involved in	7e-07
PRK14056	578	PRK14056, PRK14056, phenylalanine 4-monooxygenase;	8e-07
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	9e-07
pfam01842	66	pfam01842, ACT, ACT domain	1e-06
cd04930	115	cd04930, ACT_TH, ACT domain of the nonheme iron-de	2e-06
PRK14055	362	PRK14055, PRK14055, aromatic amino acid hydroxylas	3e-06
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-05
MTH00165	573	MTH00165, ND5, NADH dehydrogenase subunit 5; Provi	1e-05
cd04905	80	cd04905, ACT_CM-PDT, C-terminal ACT domain of the	2e-05
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	3e-05
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	4e-05
MTH00165	573	MTH00165, ND5, NADH dehydrogenase subunit 5; Provi	5e-05
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-04
MTH00212	160	MTH00212, ND6, NADH dehydrogenase subunit 6; Provi	2e-04
PRK14056	578	PRK14056, PRK14056, phenylalanine 4-monooxygenase;	3e-04
MTH00163	445	MTH00163, ND4, NADH dehydrogenase subunit 4; Provi	3e-04
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-04
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	4e-04
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	5e-04
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	6e-04
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	7e-04
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	7e-04
MTH00097	121	MTH00097, ND6, NADH dehydrogenase subunit 6; Provi	7e-04
COG0077	279	COG0077, PheA, Prephenate dehydratase [Amino acid	8e-04
MTH00163	445	MTH00163, ND4, NADH dehydrogenase subunit 4; Provi	9e-04
MTH00163	445	MTH00163, ND4, NADH dehydrogenase subunit 4; Provi	0.001
MTH00166	160	MTH00166, ND6, NADH dehydrogenase subunit 6; Provi	0.001
MTH00095	527	MTH00095, ND5, NADH dehydrogenase subunit 5; Provi	0.001
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	0.002
smart00829	287	smart00829, PKS_ER, Enoylreductase	0.002
MTH00094	403	MTH00094, ND4, NADH dehydrogenase subunit 4; Provi	0.002
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	0.002
MTH00087	195	MTH00087, ATP6, ATP synthase F0 subunit 6; Provisi	0.002
MTH00163	445	MTH00163, ND4, NADH dehydrogenase subunit 4; Provi	0.003
MTH00163	445	MTH00163, ND4, NADH dehydrogenase subunit 4; Provi	0.003
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	0.003
MTH00094	403	MTH00094, ND4, NADH dehydrogenase subunit 4; Provi	0.004
MTH00205	448	MTH00205, ND4, NADH dehydrogenase subunit 4; Provi	0.004
PRK11898	283	PRK11898, PRK11898, prephenate dehydratase; Provis	0.004
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	0.004

>gnl|CDD|130335 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydroxylase, tetrameric form

 Score =  424 bits (1091), Expect = e-143
 Identities = 194/321 (60%), Positives = 224/321 (69%), Gaps = 37/321 (11%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECA--PGGDLSSVI 321
           +IFS  ++E GALA+TLKLF+ H+VNL HIESR S      YEF VE        L  VI
Sbjct: 19  LIFS-LKEEAGALAETLKLFQAHDVNLTHIESRPSKTHPGEYEFFVEFDEASDRKLEGVI 77

Query: 322 ESLRSSC-SYINIISRNHNQ-FHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPV 379
           E LR      +NI+SR++ Q    VPWFPR+I ++DRFANQILSYG+ELDADHPGF DPV
Sbjct: 78  EHLRQKAEVTVNILSRDNKQNKDSVPWFPRKINDIDRFANQILSYGAELDADHPGFKDPV 137

Query: 380 YRARRKYFADLAFNYKH-----SILLMP-----------------------EHNHVFPLL 411
           YRARRK FAD+AFNYKH      +                           E+NH+FPLL
Sbjct: 138 YRARRKQFADIAFNYKHGQPIPRVEYTDEEIATWRTVFNNLTVLYPTHACQEYNHIFPLL 197

Query: 412 IQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPS 471
            QNCG+ EDNIPQLED+S+FL+D TGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH S
Sbjct: 198 QQNCGFREDNIPQLEDVSQFLQDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHS 257

Query: 472 KPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRL 531
           KP+YTPEPD+CHELLGHVPLFAD  FAQFSQEIGLASLGAPD+Y+E+LAT   F I   L
Sbjct: 258 KPMYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDYIEKLATLYWFTIEFGL 317

Query: 532 ASLSPDSTGFSLRPVAGLLSS 552
                +   +     AGLLSS
Sbjct: 318 CKQDGEKKAYG----AGLLSS 334

This model describes the larger, tetrameric form of phenylalanine-4-hydroxylase, as found in metazoans. The enzyme irreversibly converts phenylalanine to tryosine and is known to be the rate-limiting step in phenylalanine catabolism in some systems. It is closely related to metazoan tyrosine 3-monooxygenase and tryptophan 5-monoxygenase, and more distantly to monomeric phenylalanine-4-hydroxylases of some Gram-negative bacteria. The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PMID:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered. Length = 436

>gnl|CDD|239463 cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  345 bits (886), Expect = e-114
 Identities = 150/205 (73%), Positives = 165/205 (80%), Gaps = 28/205 (13%)

Query: 345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS------- 397
           PWFPR I++LDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NYKH        
Sbjct: 1   PWFPRTIQDLDRFANQILSYGAELDADHPGFKDPVYRARRKEFADIAYNYKHGQPIPRVE 60

Query: 398 ----------------ILLMP-----EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDST 436
                             L P     E+NHVFPLL +NCG++EDNIPQLED+S FL+  T
Sbjct: 61  YTEEEKKTWGTVFRELKSLYPTHACYEYNHVFPLLEKNCGFSEDNIPQLEDVSNFLQTCT 120

Query: 437 GFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 496
           GF LRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP+YTPEPD+CHELLGHVPLFADPS
Sbjct: 121 GFRLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDICHELLGHVPLFADPS 180

Query: 497 FAQFSQEIGLASLGAPDEYVERLAT 521
           FAQFSQEIGLASLGAPDEY+E+LAT
Sbjct: 181 FAQFSQEIGLASLGAPDEYIEKLAT 205

PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria. Length = 306

>gnl|CDD|201173 pfam00351, Biopterin_H, Biopterin-dependent aromatic amino acid hydroxylase

 Score =  320 bits (821), Expect = e-105
 Identities = 140/205 (68%), Positives = 153/205 (74%), Gaps = 28/205 (13%)

Query: 345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH-------- 396
           PWFPR+I ELDR AN +L YG ELDADHPGF DPVYR RRKYFAD+AFNYKH        
Sbjct: 1   PWFPRKISELDRCANLVLKYGPELDADHPGFKDPVYRQRRKYFADIAFNYKHGDPIPHVE 60

Query: 397 -------------SIL--LMP-----EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDST 436
                          L  L P     E+ H FPLL + CG+ EDNIPQLED+S FLK+ T
Sbjct: 61  YTEEEIKTWGTVFKTLKKLYPTHACREYLHAFPLLEKYCGFREDNIPQLEDVSNFLKERT 120

Query: 437 GFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 496
           GFSLRPVAGLLS+RDFLAGLAFRVFH TQYIRH S P+YTPEPD CHELLGHVPL ADPS
Sbjct: 121 GFSLRPVAGLLSARDFLAGLAFRVFHCTQYIRHASSPMYTPEPDCCHELLGHVPLLADPS 180

Query: 497 FAQFSQEIGLASLGAPDEYVERLAT 521
           FAQFSQEIGLASLGA DE +E+L+T
Sbjct: 181 FAQFSQEIGLASLGASDEEIEKLST 205

This family includes phenylalanine-4-hydroxylase, the phenylketonuria disease protein. Length = 306

>gnl|CDD|130337 TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenase, tetrameric

 Score =  321 bits (825), Expect = e-103
 Identities = 157/334 (47%), Positives = 194/334 (58%), Gaps = 50/334 (14%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESR-SSTRIENNYEFMVEC-APGGDLSSVI 321
           +IFS   + VG L+K + +F+  ++N+LH+ESR S        + +V+       L   +
Sbjct: 34  IIFSL-SNVVGDLSKAIAIFQDRHINILHLESRDSKDGTSKTMDVLVDVELFHYGLQEAM 92

Query: 322 ESLRSSCSYINIISRNH--------------NQFHGVPWFPRRIRELDRFANQILSYGSE 367
           + L+S      + S                 +   GVPWFP++I +LD+ AN++L YGSE
Sbjct: 93  DLLKSGLDVHEVSSPIRPTLIEAQYTEPGSDDATTGVPWFPKKISDLDKCANRVLMYGSE 152

Query: 368 LDADHPGFTDPVYRARRKYFADLAFNYKH------------------SILL--------- 400
           LDADHPGF D  YR RR  FADLA NYKH                  +I           
Sbjct: 153 LDADHPGFKDTEYRKRRMMFADLALNYKHGEPIPRVEYTEEERKTWGTIYRELRRLYKTH 212

Query: 401 -MPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFR 459
              E     PLL + CGY EDNIPQLED+SKFLK  TGF LRPVAG LS+RDFL+GLAFR
Sbjct: 213 ACKEFLDNLPLLEKYCGYREDNIPQLEDVSKFLKAKTGFRLRPVAGYLSARDFLSGLAFR 272

Query: 460 VFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERL 519
           VFH TQY+RH + P YTPEPD CHELLGH+PL ADPSFAQFSQEIGLASLGA +E +++L
Sbjct: 273 VFHCTQYVRHSADPFYTPEPDTCHELLGHMPLLADPSFAQFSQEIGLASLGASEEDIKKL 332

Query: 520 ATSNNFMIVPRLASLSPDSTGFSLRPV-AGLLSS 552
           AT   F I   L     D      +   AGLLSS
Sbjct: 333 ATLYFFTIEFGLCK-QDDEQ---FKVYGAGLLSS 362

This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria [Energy metabolism, Amino acids and amines]. Length = 464

>gnl|CDD|239462 cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH)

 Score =  292 bits (749), Expect = 2e-94
 Identities = 136/236 (57%), Positives = 158/236 (66%), Gaps = 32/236 (13%)

Query: 345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSILL---- 400
           PWFP++I +LD+ AN++L YGSELDADHPGF D VYR RRKYFAD+A NYKH   +    
Sbjct: 1   PWFPKKISDLDKCANRVLMYGSELDADHPGFKDNVYRKRRKYFADVAMNYKHGDPIPRVE 60

Query: 401 ------------------------MPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDST 436
                                     E+    PLL ++CGY EDNIPQLED+S+FLK+ T
Sbjct: 61  YTEEEIKTWGTVYRELNRLYPTHACREYLKNLPLLEKHCGYREDNIPQLEDVSRFLKERT 120

Query: 437 GFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 496
           GF++RPVAG LS RDFLAGLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL ADPS
Sbjct: 121 GFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLADPS 180

Query: 497 FAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           FAQFSQEIGLASLGA DE +++LAT   F +   L         +     AGLLSS
Sbjct: 181 FAQFSQEIGLASLGASDEDIQKLATCYFFTVEFGLCKQDGQLKVYG----AGLLSS 232

TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter. Length = 287

>gnl|CDD|130336 TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase, tetrameric

 Score =  268 bits (687), Expect = 5e-83
 Identities = 125/282 (44%), Positives = 168/282 (59%), Gaps = 33/282 (11%)

Query: 272 EVGALAKTLKLFKKHNVNLLHIESRSSTRIEN---NYEFMVEC-APGGDLSSVIESLRSS 327
           E+ +L + LK  +   +NL+H E+R +  + N   +Y  ++   A   ++S +IESLR +
Sbjct: 48  EISSLHRILKYIETFKLNLVHFETRPTRTLSNADVDYSCLITLEANEINMSLLIESLRGN 107

Query: 328 CSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYF 387
                I   N NQ     WFP+ I ELD+  + +  +  +LD DHPGF D VYR RR+  
Sbjct: 108 SFISGINLLN-NQNVKEDWFPKHISELDKCQHLLTKFQPDLDTDHPGFHDKVYRQRREAI 166

Query: 388 ADLAFNYKHSILL----------------------------MPEHNHVFPLLIQNCGYAE 419
           A++AF YK+   +                              E+   F LL + C Y  
Sbjct: 167 AEIAFQYKYGDPIPEVEYTKEEIETWRLVFTTMKDLHASHACREYIDAFQLLEKYCNYNS 226

Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
           ++IPQL+ IS+FL  +TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P++TPEP
Sbjct: 227 ESIPQLQTISEFLHRTTGFRLRPVAGLLSARDFLASLAFRVFQCTQYIRHHSSPMHTPEP 286

Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLAT 521
           D  HELLGH+P+ AD  FAQFSQEIGLASLGA +E +E+L+T
Sbjct: 287 DCIHELLGHMPMLADRQFAQFSQEIGLASLGASEEEIEKLST 328

This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria. Length = 457

>gnl|CDD|239461 cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  260 bits (667), Expect = 4e-82
 Identities = 116/204 (56%), Positives = 139/204 (68%), Gaps = 28/204 (13%)

Query: 346 WFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH--------- 396
           WFPR I ELD+  + +  Y  +LD DHPGF+D VYR RRK  A++AF YKH         
Sbjct: 1   WFPRHISELDKCHHLVTKYEPDLDLDHPGFSDKVYRERRKLIAEIAFQYKHGDPIPRVEY 60

Query: 397 ------------SIL--LMP-----EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTG 437
                         L  L       E+   F LL + CGY+ED IPQLED+S+FLK+ TG
Sbjct: 61  TAEEIATWKEVYKTLKDLHATHACKEYLDAFQLLEKECGYSEDRIPQLEDVSEFLKERTG 120

Query: 438 FSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSF 497
           F LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ ADP+F
Sbjct: 121 FQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADPTF 180

Query: 498 AQFSQEIGLASLGAPDEYVERLAT 521
           AQFSQ+IGLASLGA DE +E+L+T
Sbjct: 181 AQFSQDIGLASLGASDEEIEKLST 204

TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline. Length = 298

>gnl|CDD|239463 cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  228 bits (582), Expect = 2e-69
 Identities = 90/112 (80%), Positives = 100/112 (89%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+PRV+YT EE KTWG VFR L  LYPTHAC E+NHVFPLL +NCG++EDNIPQLED+
Sbjct: 53  GQPIPRVEYTEEEKKTWGTVFRELKSLYPTHACYEYNHVFPLLEKNCGFSEDNIPQLEDV 112

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
           S FL+  TGF LRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP+YTPEPD
Sbjct: 113 SNFLQTCTGFRLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPD 164

PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria. Length = 306

>gnl|CDD|130335 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydroxylase, tetrameric form

 Score =  227 bits (581), Expect = 1e-67
 Identities = 89/112 (79%), Positives = 101/112 (90%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+PRV+YT EE  TW  VF NLT LYPTHAC+E+NH+FPLL QNCG+ EDNIPQLED+
Sbjct: 155 GQPIPRVEYTDEEIATWRTVFNNLTVLYPTHACQEYNHIFPLLQQNCGFREDNIPQLEDV 214

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
           S+FL+D TGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH SKP+YTPEPD
Sbjct: 215 SQFLQDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSKPMYTPEPD 266

This model describes the larger, tetrameric form of phenylalanine-4-hydroxylase, as found in metazoans. The enzyme irreversibly converts phenylalanine to tryosine and is known to be the rate-limiting step in phenylalanine catabolism in some systems. It is closely related to metazoan tyrosine 3-monooxygenase and tryptophan 5-monoxygenase, and more distantly to monomeric phenylalanine-4-hydroxylases of some Gram-negative bacteria. The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PMID:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered. Length = 436

>gnl|CDD|201173 pfam00351, Biopterin_H, Biopterin-dependent aromatic amino acid hydroxylase

 Score =  216 bits (553), Expect = 3e-65
 Identities = 84/113 (74%), Positives = 96/113 (84%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+P V+YT EE KTWG VF+ L KLYPTHAC+E+ H FPLL + CG+ EDNIPQLED+
Sbjct: 53  GDPIPHVEYTEEEIKTWGTVFKTLKKLYPTHACREYLHAFPLLEKYCGFREDNIPQLEDV 112

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
           S FLK+ TGFSLRPVAGLLS+RDFLAGLAFRVFH TQYIRH S P+YTPEPD 
Sbjct: 113 SNFLKERTGFSLRPVAGLLSARDFLAGLAFRVFHCTQYIRHASSPMYTPEPDC 165

This family includes phenylalanine-4-hydroxylase, the phenylketonuria disease protein. Length = 306

>gnl|CDD|239462 cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH)

 Score =  201 bits (512), Expect = 1e-59
 Identities = 80/113 (70%), Positives = 95/113 (84%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+PRV+YT EE KTWG V+R L +LYPTHAC+E+    PLL ++CGY EDNIPQLED+
Sbjct: 53  GDPIPRVEYTEEEIKTWGTVYRELNRLYPTHACREYLKNLPLLEKHCGYREDNIPQLEDV 112

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
           S+FLK+ TGF++RPVAG LS RDFLAGLAFRVFH TQY+RH S P YTPEPDT
Sbjct: 113 SRFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPFYTPEPDT 165

TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter. Length = 287

>gnl|CDD|238215 cd00361, arom_aa_hydroxylase, Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  191 bits (489), Expect = 4e-57
 Identities = 79/121 (65%), Positives = 89/121 (73%), Gaps = 5/121 (4%)

Query: 402 PEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVF 461
            E+     LL    G  ED IPQLED+S+FLK  TG++L PVAGL+S RDF A LAFRVF
Sbjct: 30  REYLEGLELL----GLPEDRIPQLEDVSEFLKALTGWTLVPVAGLISPRDFFALLAFRVF 85

Query: 462 HSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPD-EYVERLA 520
             TQYIRHP +P YTPEPD+ HEL GHVPL ADPSFA FSQE GLASLGA D E +E+LA
Sbjct: 86  PVTQYIRHPEEPDYTPEPDIFHELFGHVPLLADPSFADFSQEYGLASLGASDLEEIEKLA 145

Query: 521 T 521
            
Sbjct: 146 R 146

PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers. Length = 221

>gnl|CDD|130337 TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenase, tetrameric

 Score =  196 bits (500), Expect = 7e-56
 Identities = 80/113 (70%), Positives = 91/113 (80%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           GEP+PRV+YT EE KTWG ++R L +LY THACKE     PLL + CGY EDNIPQLED+
Sbjct: 182 GEPIPRVEYTEEERKTWGTIYRELRRLYKTHACKEFLDNLPLLEKYCGYREDNIPQLEDV 241

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
           SKFLK  TGF LRPVAG LS+RDFL+GLAFRVFH TQY+RH + P YTPEPDT
Sbjct: 242 SKFLKAKTGFRLRPVAGYLSARDFLSGLAFRVFHCTQYVRHSADPFYTPEPDT 294

This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria [Energy metabolism, Amino acids and amines]. Length = 464

>gnl|CDD|239461 cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  188 bits (479), Expect = 1e-54
 Identities = 75/112 (66%), Positives = 91/112 (81%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+PRV+YTAEE  TW EV++ L  L+ THACKE+   F LL + CGY+ED IPQLED+
Sbjct: 52  GDPIPRVEYTAEEIATWKEVYKTLKDLHATHACKEYLDAFQLLEKECGYSEDRIPQLEDV 111

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
           S+FLK+ TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD
Sbjct: 112 SEFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPD 163

TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline. Length = 298

>gnl|CDD|239463 cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  178 bits (452), Expect = 1e-50
 Identities = 77/91 (84%), Positives = 82/91 (90%), Gaps = 3/91 (3%)

Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP+YTPEPD+
Sbjct: 106 IPQLEDVSNFLQTCTGFRLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDI 165

Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLFADPSFAQFSQEIGLASLGAP
Sbjct: 166 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 196

PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria. Length = 306

>gnl|CDD|238215 cd00361, arom_aa_hydroxylase, Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  173 bits (440), Expect = 4e-50
 Identities = 68/109 (62%), Positives = 78/109 (71%), Gaps = 4/109 (3%)

Query: 5   PRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFL 64
           PRVDYT EE  TW  ++R L KL PTHAC+E+     LL    G  ED IPQLED+S+FL
Sbjct: 1   PRVDYTEEEHATWRTLYRRLKKLLPTHACREYLEGLELL----GLPEDRIPQLEDVSEFL 56

Query: 65  KDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
           K  TG++L PVAGL+S RDF A LAFRVF  TQYIRHP +P YTPEPD 
Sbjct: 57  KALTGWTLVPVAGLISPRDFFALLAFRVFPVTQYIRHPEEPDYTPEPDI 105

PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers. Length = 221

>gnl|CDD|130335 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydroxylase, tetrameric form

 Score =  177 bits (450), Expect = 4e-49
 Identities = 75/91 (82%), Positives = 81/91 (89%), Gaps = 3/91 (3%)

Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S    D TGF+LRPVAGLLSSRDFLAGLAFRVFHSTQYIRH SKP+YTPEPD+
Sbjct: 208 IPQLEDVSQFLQDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSKPMYTPEPDI 267

Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLFAD  FAQFSQEIGLASLGAP
Sbjct: 268 CHELLGHVPLFADVEFAQFSQEIGLASLGAP 298

This model describes the larger, tetrameric form of phenylalanine-4-hydroxylase, as found in metazoans. The enzyme irreversibly converts phenylalanine to tryosine and is known to be the rate-limiting step in phenylalanine catabolism in some systems. It is closely related to metazoan tyrosine 3-monooxygenase and tryptophan 5-monoxygenase, and more distantly to monomeric phenylalanine-4-hydroxylases of some Gram-negative bacteria. The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PMID:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered. Length = 436

>gnl|CDD|130336 TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase, tetrameric

 Score =  174 bits (442), Expect = 8e-48
 Identities = 66/114 (57%), Positives = 85/114 (74%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+P V+YT EE +TW  VF  +  L+ +HAC+E+   F LL + C Y  ++IPQL+ I
Sbjct: 176 GDPIPEVEYTKEEIETWRLVFTTMKDLHASHACREYIDAFQLLEKYCNYNSESIPQLQTI 235

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL 114
           S+FL  +TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P++TPEPD +
Sbjct: 236 SEFLHRTTGFRLRPVAGLLSARDFLASLAFRVFQCTQYIRHHSSPMHTPEPDCI 289

This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria. Length = 457

>gnl|CDD|201173 pfam00351, Biopterin_H, Biopterin-dependent aromatic amino acid hydroxylase

 Score =  168 bits (426), Expect = 4e-47
 Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)

Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S    + TGFSLRPVAGLLS+RDFLAGLAFRVFH TQYIRH S P+YTPEPD 
Sbjct: 106 IPQLEDVSNFLKERTGFSLRPVAGLLSARDFLAGLAFRVFHCTQYIRHASSPMYTPEPDC 165

Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPL ADPSFAQFSQEIGLASLGA 
Sbjct: 166 CHELLGHVPLLADPSFAQFSQEIGLASLGAS 196

This family includes phenylalanine-4-hydroxylase, the phenylketonuria disease protein. Length = 306

>gnl|CDD|239462 cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH)

 Score =  161 bits (408), Expect = 8e-45
 Identities = 68/90 (75%), Positives = 75/90 (83%), Gaps = 3/90 (3%)

Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S    + TGF++RPVAG LS RDFLAGLAFRVFH TQY+RH S P YTPEPD 
Sbjct: 106 IPQLEDVSRFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPFYTPEPDT 165

Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGA 614
           CHELLGHVPL ADPSFAQFSQEIGLASLGA
Sbjct: 166 CHELLGHVPLLADPSFAQFSQEIGLASLGA 195

TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter. Length = 287

>gnl|CDD|238215 cd00361, arom_aa_hydroxylase, Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  155 bits (393), Expect = 2e-43
 Identities = 70/135 (51%), Positives = 85/135 (62%), Gaps = 14/135 (10%)

Query: 481 VCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTG 540
           +   L   +P  A   + +     GL  LG P++ + +L   + F     L +L    TG
Sbjct: 16  LYRRLKKLLPTHACREYLE-----GLELLGLPEDRIPQLEDVSEF-----LKAL----TG 61

Query: 541 FSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSF 600
           ++L PVAGL+S RDF A LAFRVF  TQYIRHP +P YTPEPD+ HEL GHVPL ADPSF
Sbjct: 62  WTLVPVAGLISPRDFFALLAFRVFPVTQYIRHPEEPDYTPEPDIFHELFGHVPLLADPSF 121

Query: 601 AQFSQEIGLASLGAP 615
           A FSQE GLASLGA 
Sbjct: 122 ADFSQEYGLASLGAS 136

PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers. Length = 221

>gnl|CDD|130337 TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenase, tetrameric

 Score =  160 bits (407), Expect = 7e-43
 Identities = 66/90 (73%), Positives = 74/90 (82%), Gaps = 3/90 (3%)

Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAG LS+RDFL+GLAFRVFH TQY+RH + P YTPEPD 
Sbjct: 235 IPQLEDVSKFLKAKTGFRLRPVAGYLSARDFLSGLAFRVFHCTQYVRHSADPFYTPEPDT 294

Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGA 614
           CHELLGH+PL ADPSFAQFSQEIGLASLGA
Sbjct: 295 CHELLGHMPLLADPSFAQFSQEIGLASLGA 324

This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria [Energy metabolism, Amino acids and amines]. Length = 464

>gnl|CDD|239461 cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score =  154 bits (391), Expect = 3e-42
 Identities = 61/76 (80%), Positives = 68/76 (89%)

Query: 539 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 598
           TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ ADP
Sbjct: 119 TGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADP 178

Query: 599 SFAQFSQEIGLASLGA 614
           +FAQFSQ+IGLASLGA
Sbjct: 179 TFAQFSQDIGLASLGA 194

TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline. Length = 298

>gnl|CDD|130336 TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase, tetrameric

 Score =  145 bits (368), Expect = 9e-38
 Identities = 63/90 (70%), Positives = 73/90 (81%), Gaps = 3/90 (3%)

Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L ++S     +TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P++TPEPD 
Sbjct: 229 IPQLQTISEFLHRTTGFRLRPVAGLLSARDFLASLAFRVFQCTQYIRHHSSPMHTPEPDC 288

Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGA 614
            HELLGH+P+ AD  FAQFSQEIGLASLGA
Sbjct: 289 IHELLGHMPMLADRQFAQFSQEIGLASLGA 318

This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria. Length = 457

>gnl|CDD|237020 PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed

 Score =  113 bits (286), Expect = 4e-28
 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 416 GYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLY 475
           G  +D IPQL++I++ L+ +TG+ + PV GL+    F   LA R F    +IR P +  Y
Sbjct: 62  GLPKDRIPQLDEINRVLQAATGWQVVPVPGLIPFDVFFELLANRRFPVATFIRRPEELDY 121

Query: 476 TPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEY-VERLA 520
             EPD+ H++ GHVPL  +P FA F Q  G   L A  E  +E LA
Sbjct: 122 LQEPDIFHDVFGHVPLLTNPVFADFMQAYGKLGLRASKEGRLEFLA 167

Length = 275

>gnl|CDD|237020 PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed

 Score =  105 bits (264), Expect = 3e-25
 Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 3   PLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISK 62
             P +DYTAEE   W  ++     L P  AC E       L    G  +D IPQL++I++
Sbjct: 21  DQPWIDYTAEEHAIWQTLYERQLALLPGRACDEFLEGLEAL----GLPKDRIPQLDEINR 76

Query: 63  FLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
            L+ +TG+ + PV GL+    F   LA R F    +IR P +  Y  EPD
Sbjct: 77  VLQAATGWQVVPVPGLIPFDVFFELLANRRFPVATFIRRPEELDYLQEPD 126

Length = 275

>gnl|CDD|130335 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydroxylase, tetrameric form

 Score =  104 bits (262), Expect = 6e-24
 Identities = 39/47 (82%), Positives = 43/47 (91%)

Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
            I ++DRFANQILSYG+ELDADHPGF DPVYRARRK FAD+AFNYKH
Sbjct: 108 KINDIDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAFNYKH 154

This model describes the larger, tetrameric form of phenylalanine-4-hydroxylase, as found in metazoans. The enzyme irreversibly converts phenylalanine to tryosine and is known to be the rate-limiting step in phenylalanine catabolism in some systems. It is closely related to metazoan tyrosine 3-monooxygenase and tryptophan 5-monoxygenase, and more distantly to monomeric phenylalanine-4-hydroxylases of some Gram-negative bacteria. The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PMID:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered. Length = 436

>gnl|CDD|153176 cd04904, ACT_AAAH, ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH)

 Score = 93.4 bits (233), Expect = 3e-23
 Identities = 38/73 (52%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPG-GDLSSVIE 322
           +IFS  ++EVGALA+ LKLF++  VNL HIESR S R  + YEF V+C    GDL  +I 
Sbjct: 3   LIFS-LKEEVGALARALKLFEEFGVNLTHIESRPSRRNGSEYEFFVDCEVDRGDLDQLIS 61

Query: 323 SLRSSCSYINIIS 335
           SLR   + +NI+S
Sbjct: 62  SLRRVVADVNILS 74

ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxytryptamine (serotonin) and the first reaction in the synthesis of melatonin. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains (this CD) and differ in their mechanisms of regulation. One commonality is that all three eukaryotic enzymes are regulated in part by the phosphorylation of serine residues N-terminal of the ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains. Length = 74

>gnl|CDD|239463 cd03347, eu_PheOH, Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score = 98.7 bits (246), Expect = 1e-22
 Identities = 40/47 (85%), Positives = 45/47 (95%)

Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           TI++LDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NYKH
Sbjct: 6   TIQDLDRFANQILSYGAELDADHPGFKDPVYRARRKEFADIAYNYKH 52

PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria. Length = 306

>gnl|CDD|237020 PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed

 Score = 97.2 bits (243), Expect = 2e-22
 Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 9/110 (8%)

Query: 505 GLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVF 564
           GL +LG P + + +L   N       L +     TG+ + PV GL+    F   LA R F
Sbjct: 57  GLEALGLPKDRIPQLDEINR-----VLQAA----TGWQVVPVPGLIPFDVFFELLANRRF 107

Query: 565 HSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
               +IR P +  Y  EPD+ H++ GHVPL  +P FA F Q  G   L A
Sbjct: 108 PVATFIRRPEELDYLQEPDIFHDVFGHVPLLTNPVFADFMQAYGKLGLRA 157

Length = 275

>gnl|CDD|239464 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH)

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 4/105 (3%)

Query: 419 EDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE 478
            D IP   D+S+ LK +TG+++  V GL+   +F   LA R F  T +IR P +  Y  E
Sbjct: 49  TDRIPDFADVSERLKAATGWTVVAVPGLIPDDEFFEHLANRRFPVTNFIRRPEELDYLQE 108

Query: 479 PDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP----DEYVERL 519
           PD+ H++ GHVP+  +P FA F Q  G   L A        + RL
Sbjct: 109 PDIFHDIFGHVPMLTNPVFADFMQAYGKGGLKATGLEDRALLARL 153

PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. Length = 228

>gnl|CDD|201173 pfam00351, Biopterin_H, Biopterin-dependent aromatic amino acid hydroxylase

 Score = 92.2 bits (229), Expect = 2e-20
 Identities = 37/47 (78%), Positives = 39/47 (82%)

Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
            I ELDR AN +L YG ELDADHPGF DPVYR RRKYFAD+AFNYKH
Sbjct: 6   KISELDRCANLVLKYGPELDADHPGFKDPVYRQRRKYFADIAFNYKH 52

This family includes phenylalanine-4-hydroxylase, the phenylketonuria disease protein. Length = 306

>gnl|CDD|225727 COG3186, COG3186, Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]

 Score = 82.9 bits (205), Expect = 2e-17
 Identities = 32/90 (35%), Positives = 47/90 (52%)

Query: 416 GYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLY 475
           G     IP  ++I++ L+  TG+ +  V GL+    F   LA R F    ++R P +  Y
Sbjct: 77  GLPLSRIPDFDEINRVLQRETGWQVVAVPGLVPFDVFFDLLANRRFPVATFMRTPDELDY 136

Query: 476 TPEPDVCHELLGHVPLFADPSFAQFSQEIG 505
             EPD+ H++ GHVP+   P FA F Q  G
Sbjct: 137 LQEPDIFHDVFGHVPMLTHPVFADFMQAYG 166

Length = 291

>gnl|CDD|239462 cd03346, eu_TrpOH, Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH)

 Score = 81.8 bits (202), Expect = 4e-17
 Identities = 34/46 (73%), Positives = 39/46 (84%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           I +LD+ AN++L YGSELDADHPGF D VYR RRKYFAD+A NYKH
Sbjct: 7   ISDLDKCANRVLMYGSELDADHPGFKDNVYRKRRKYFADVAMNYKH 52

TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter. Length = 287

>gnl|CDD|239464 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH)

 Score = 80.4 bits (199), Expect = 4e-17
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 511 APDEYVERLATSNNFMI-VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHS 566
           A D ++E L         +P  A +S     +TG+++  V GL+   +F   LA R F  
Sbjct: 34  ACDAFLEGLEKLGLPTDRIPDFADVSERLKAATGWTVVAVPGLIPDDEFFEHLANRRFPV 93

Query: 567 TQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           T +IR P +  Y  EPD+ H++ GHVP+  +P FA F Q  G   L A 
Sbjct: 94  TNFIRRPEELDYLQEPDIFHDIFGHVPMLTNPVFADFMQAYGKGGLKAT 142

PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. Length = 228

>gnl|CDD|239464 cd03348, pro_PheOH, Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH)

 Score = 79.6 bits (197), Expect = 8e-17
 Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 7   VDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKD 66
           +DYT EE   W  ++    KL P  AC         L    G   D IP   D+S+ LK 
Sbjct: 9   IDYTPEEHAVWRTLYERQAKLLPGRACDAFLEGLEKL----GLPTDRIPDFADVSERLKA 64

Query: 67  STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
           +TG+++  V GL+   +F   LA R F  T +IR P +  Y  EPD 
Sbjct: 65  ATGWTVVAVPGLIPDDEFFEHLANRRFPVTNFIRRPEELDYLQEPDI 111

PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. Length = 228

>gnl|CDD|130337 TIGR01270, Trp_5_monoox, tryptophan 5-monooxygenase, tetrameric

 Score = 82.6 bits (204), Expect = 1e-16
 Identities = 32/46 (69%), Positives = 36/46 (78%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           I +LD+ AN++L YGSELDADHPGF D  YR RR  FADLA NYKH
Sbjct: 136 ISDLDKCANRVLMYGSELDADHPGFKDTEYRKRRMMFADLALNYKH 181

This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria [Energy metabolism, Amino acids and amines]. Length = 464

>gnl|CDD|130334 TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydroxylase, monomeric form

 Score = 74.1 bits (182), Expect = 8e-15
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 412 IQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPS 471
           I+  G   D IP  ++I++ L+ +TG+ +  V GL+  + F   LA R F  T ++R P 
Sbjct: 42  IEQLGLPHDRIPDFDEINRKLQATTGWRIAAVPGLIPFQTFFEHLANRRFPVTTWLRTPE 101

Query: 472 KPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP----DEYVERL 519
           +  Y  EPD+ H++ GHVPL  +P FA F+   G   L A      E + RL
Sbjct: 102 ELDYLQEPDIFHDIFGHVPLLTNPVFADFTHTYGKLGLKASALGRVEMLARL 153

This model describes the smaller, monomeric form of phenylalanine-4-hydroxylase, as found in a small number of Gram-negative bacteria. The enzyme irreversibly converts phenylalanine to tryosine and is known to be the rate-limiting step in phenylalanine catabolism in some systems. This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase [Energy metabolism, Amino acids and amines]. Length = 248

>gnl|CDD|153152 cd04880, ACT_AAAH-PDT-like, ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH)

 Score = 67.1 bits (165), Expect = 4e-14
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC---APGGDLSSV 320
           ++FS   ++ GALAK LK+F +  +NL  IESR S +    YEF V+        D+   
Sbjct: 2   LVFSLK-NKPGALAKALKVFAERGINLTKIESRPSRKGLWEYEFFVDFEGHIDDPDVKEA 60

Query: 321 IESLRSSCSYINII 334
           +E L+     + ++
Sbjct: 61  LEELKRVTEDVKVL 74

ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mechanisms of regulation. One commonality is that all three eukaryotic enzymes appear to be regulated, in part, by the phosphorylation of serine residues N-terminal of the ACT domain. Also included in this CD are the C-terminal ACT domains of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme found in plants, fungi, bacteria, and archaea. The P-protein of Escherichia coli (CM-PDT) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe binding. L-Phe binds with positive cooperativity; with this binding, there is a shift in the protein to less active tetrameric and higher oligomeric forms from a more active dimeric form. Members of this CD belong to the superfamily of ACT regulatory domains. Length = 75

>gnl|CDD|153203 cd04931, ACT_PAH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH)

 Score = 64.4 bits (157), Expect = 7e-13
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 3/66 (4%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD--LSSVI 321
           +IFS  ++EVGALAK L+LF++ ++NL HIESR S   ++ YEF +         L  +I
Sbjct: 17  LIFS-LKEEVGALAKVLRLFEEKDINLTHIESRPSRLNKDEYEFFINLDKKSAPALDPII 75

Query: 322 ESLRSS 327
           +SLR+ 
Sbjct: 76  KSLRND 81

ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains. Length = 90

>gnl|CDD|225727 COG3186, COG3186, Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]

 Score = 67.1 bits (164), Expect = 4e-12
 Identities = 27/70 (38%), Positives = 37/70 (52%)

Query: 539 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 598
           TG+ +  V GL+    F   LA R F    ++R P +  Y  EPD+ H++ GHVP+   P
Sbjct: 97  TGWQVVAVPGLVPFDVFFDLLANRRFPVATFMRTPDELDYLQEPDIFHDVFGHVPMLTHP 156

Query: 599 SFAQFSQEIG 608
            FA F Q  G
Sbjct: 157 VFADFMQAYG 166

Length = 291

>gnl|CDD|153201 cd04929, ACT_TPH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes

 Score = 61.2 bits (149), Expect = 6e-12
 Identities = 25/48 (52%), Positives = 35/48 (72%), Gaps = 1/48 (2%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC 311
           VIFS  ++EVG LAK LKLF++  +N++HIESR S R  + +E  V+C
Sbjct: 3   VIFS-LKNEVGGLAKALKLFQELGINVVHIESRKSKRRSSEFEIFVDC 49

ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxytryptamine (serotonin) and the first reaction in the synthesis of melatonin. Very little is known about the role of the ACT domain in TPH, which appears to be regulated by phosphorylation but not by its substrate or cofactor. Members of this CD belong to the superfamily of ACT regulatory domains. Length = 74

>gnl|CDD|225727 COG3186, COG3186, Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)

Query: 7   VDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKD 66
           +DY   E   W  +    TKL    AC+E    F   ++  G     IP  ++I++ L+ 
Sbjct: 40  IDYPQAEHAVWRTLIDRQTKLLKGRACQE----FLDGLEALGLPLSRIPDFDEINRVLQR 95

Query: 67  STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
            TG+ +  V GL+    F   LA R F    ++R P +  Y  EPD
Sbjct: 96  ETGWQVVAVPGLVPFDVFFDLLANRRFPVATFMRTPDELDYLQEPD 141

Length = 291

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 64.6 bits (158), Expect = 4e-11
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           +T+ + GA  G G AAIQ+ K +G TV A+ G    + +A  LGADYV+D+ 
Sbjct: 168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYR 219

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|239461 cd03345, eu_TyrOH, Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH)

 Score = 63.6 bits (155), Expect = 6e-11
 Identities = 25/46 (54%), Positives = 32/46 (69%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           I ELD+  + +  Y  +LD DHPGF+D VYR RRK  A++AF YKH
Sbjct: 6   ISELDKCHHLVTKYEPDLDLDHPGFSDKVYRERRKLIAEIAFQYKH 51

TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline. Length = 298

>gnl|CDD|130334 TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydroxylase, monomeric form

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 3   PLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISK 62
                 Y+ EE   W  +     KL    AC+E    +   I+  G   D IP  ++I++
Sbjct: 5   DQGFDHYSEEEHAVWNTLITRQLKLIEGRACQE----YLDGIEQLGLPHDRIPDFDEINR 60

Query: 63  FLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
            L+ +TG+ +  V GL+  + F   LA R F  T ++R P +  Y  EPD
Sbjct: 61  KLQATTGWRIAAVPGLIPFQTFFEHLANRRFPVTTWLRTPEELDYLQEPD 110

This model describes the smaller, monomeric form of phenylalanine-4-hydroxylase, as found in a small number of Gram-negative bacteria. The enzyme irreversibly converts phenylalanine to tryosine and is known to be the rate-limiting step in phenylalanine catabolism in some systems. This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase [Energy metabolism, Amino acids and amines]. Length = 248

>gnl|CDD|130334 TIGR01267, Phe4hydrox_mono, phenylalanine-4-hydroxylase, monomeric form

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query: 539 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 598
           TG+ +  V GL+  + F   LA R F  T ++R P +  Y  EPD+ H++ GHVPL  +P
Sbjct: 66  TGWRIAAVPGLIPFQTFFEHLANRRFPVTTWLRTPEELDYLQEPDIFHDIFGHVPLLTNP 125

Query: 599 SFAQFSQEIG 608
            FA F+   G
Sbjct: 126 VFADFTHTYG 135

This model describes the smaller, monomeric form of phenylalanine-4-hydroxylase, as found in a small number of Gram-negative bacteria. The enzyme irreversibly converts phenylalanine to tryosine and is known to be the rate-limiting step in phenylalanine catabolism in some systems. This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase [Energy metabolism, Amino acids and amines]. Length = 248

>gnl|CDD|130336 TIGR01269, Tyr_3_monoox, tyrosine 3-monooxygenase, tetrameric

 Score = 59.2 bits (143), Expect = 3e-09
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           I ELD+  + +  +  +LD DHPGF D VYR RR+  A++AF YK+
Sbjct: 130 ISELDKCQHLLTKFQPDLDTDHPGFHDKVYRQRREAIAEIAFQYKY 175

This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria. Length = 457

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 57.2 bits (139), Expect = 8e-09
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
           +T+ + G +   G AA+Q+ +  G  V A+     G       GAD V ++  R  D  A
Sbjct: 146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNY--RAED-LA 202

Query: 172 NQILSY 177
           ++IL+ 
Sbjct: 203 DRILAA 208

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 54.8 bits (133), Expect = 5e-08
 Identities = 23/56 (41%), Positives = 35/56 (62%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIREL 167
           +T+ ++GA  G GLAA+Q+ KA G  V A+      +A A  LGAD+V+D+   +L
Sbjct: 141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDL 196

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|172547 PRK14055, PRK14055, aromatic amino acid hydroxylase; Provisional

 Score = 52.8 bits (126), Expect = 3e-07
 Identities = 28/80 (35%), Positives = 44/80 (55%)

Query: 426 EDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHEL 485
           + + KF +  T FS  PV+G ++   +L+ L  R F     +R   K  ++  PD+ H+L
Sbjct: 143 QAVIKFFELETHFSYYPVSGFVAPHQYLSLLQDRYFPIASVMRTLDKDNFSLTPDLIHDL 202

Query: 486 LGHVPLFADPSFAQFSQEIG 505
           LGHVP    PSF++F   +G
Sbjct: 203 LGHVPWLLHPSFSEFFINMG 222

Length = 362

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 52.1 bits (126), Expect = 4e-07
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
           +T+ I G   G G AAIQ+ KA G  V A+ G    +     LGAD  +++  R  D FA
Sbjct: 141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINY--RTED-FA 197

Query: 172 NQIL 175
            ++ 
Sbjct: 198 EEVK 201

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|153139 cd02116, ACT, ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 269 HQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLR 325
             D  G LAK L +  +  +N+  IE R+S       +  +     GDL  ++E+L 
Sbjct: 5   GPDRPGLLAKVLSVLAEAGINITSIEQRTS-GDGGEADIFIVVDGDGDLEKLLEALE 60

Members of this CD belong to the superfamily of ACT regulatory domains. Pairs of ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme. The ACT domain has been detected in a number of diverse proteins; some of these proteins are involved in amino acid and purine biosynthesis, phenylalanine hydroxylation, regulation of bacterial metabolism and transcription, and many remain to be characterized. ACT domain-containing enzymes involved in amino acid and purine synthesis are in many cases allosteric enzymes with complex regulation enforced by the binding of ligands. The ACT domain is commonly involved in the binding of a small regulatory molecule, such as the amino acids L-Ser and L-Phe in the case of D-3-phosphoglycerate dehydrogenase and the bifunctional chorismate mutase-prephenate dehydratase enzyme (P-protein), respectively. Aspartokinases typically consist of two C-terminal ACT domains in a tandem repeat, but the second ACT domain is inserted within the first, resulting in, what is normally the terminal beta strand of ACT2, formed from a region N-terminal of ACT1. ACT domain repeats have been shown to have nonequivalent ligand-binding sites with complex regulatory patterns such as those seen in the bifunctional enzyme, aspartokinase-homoserine dehydrogenase (ThrA). In other enzymes, such as phenylalanine hydroxylases, the ACT domain appears to function as a flexible small module providing allosteric regulation via transmission of conformational changes, these conformational changes are not necessarily initiated by regulatory ligand binding at the ACT domain itself. ACT domains are present either singularly, N- or C-terminal, or in pairs present C-terminal or between two catalytic domains. Unique to cyanobacteria are four ACT domains C-terminal to an aspartokinase domain. A few proteins are composed almost entirely of ACT domain repeats as seen in the four ACT domain protein, the ACR protein, found in higher plants; and the two ACT domain protein, the glycine cleavage system transcriptional repressor (GcvR) protein, found in some bacteria. Also seen are single ACT domain proteins similar to the Streptococcus pneumoniae ACT domain protein (uncharacterized pdb structure 1ZPV) found in both bacteria and archaea. Purportedly, the ACT domain is an evolutionarily mobile ligand binding regulatory module that has been fused to different enzymes at various times. Length = 60

>gnl|CDD|237598 PRK14056, PRK14056, phenylalanine 4-monooxygenase; Provisional

 Score = 52.0 bits (125), Expect = 8e-07
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
           + IP++E++++ L +  G+    V G +    F       V      IR      YTP P
Sbjct: 60  ERIPKVEEMNECLAEI-GWGAVAVDGFIPPVAFFEFQGHGVLPIATDIRKVENIEYTPAP 118

Query: 480 DVCHELLGHVPLFADPSFAQFSQ---EIG 505
           D+ HE  GH P+ ADP++A++ +   EIG
Sbjct: 119 DIIHEAAGHAPILADPTYAEYLRRFGEIG 147

Length = 578

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 50.8 bits (122), Expect = 9e-07
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
           +T+ + GA  G G AAIQ+ KA G TV A V     +     LGAD+V+++     + F 
Sbjct: 144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYR---EEDFV 200

Query: 172 NQIL 175
            Q+ 
Sbjct: 201 EQVR 204

Length = 326

>gnl|CDD|190133 pfam01842, ACT, ACT domain

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIES 323
           V+     D  G LA+         +N+  I   +S   +    F+V      DL + +E+
Sbjct: 2   VLEVGVPDRPGLLAEVFGALADRGINIESISQSTSGD-KAGIVFIVVVVDEEDLEAALEA 60

Query: 324 LRS 326
           L+ 
Sbjct: 61  LKK 63

This family of domains generally have a regulatory role. ACT domains are linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The ACT domain is found in: D-3-phosphoglycerate dehydrogenase EC:1.1.1.95, which is inhibited by serine. Aspartokinase EC:2.7.2.4, which is regulated by lysine. Acetolactate synthase small regulatory subunit, which is inhibited by valine. Phenylalanine-4-hydroxylase EC:1.14.16.1, which is regulated by phenylalanine. Prephenate dehydrogenase EC:4.2.1.51. formyltetrahydrofolate deformylase EC:3.5.1.10, which is activated by methionine and inhibited by glycine. GTP pyrophosphokinase EC:2.7.6.5. Length = 66

>gnl|CDD|153202 cd04930, ACT_TH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH)

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 274 GALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC-APGGDLSSVIESLRSSCSYIN 332
            +L++ LK+F+     + H+ESR S +   + E +V C     DL  +I SLR     + 
Sbjct: 53  SSLSRILKVFETFEAKIHHLESRPSRKEGGDLEVLVRCEVHRSDLLQLISSLRQVAEDVR 112

Query: 333 I 333
           +
Sbjct: 113 L 113

ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH). TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines (dopamine, noradrenaline and adrenaline), functioning as hormones and neurotransmitters. The enzyme is not regulated by its amino acid substrate, but instead by phosphorylation at several serine residues located N-terminal of the ACT domain, and by feedback inhibition by catecholamines at the active site. Members of this CD belong to the superfamily of ACT regulatory domains. Length = 115

>gnl|CDD|172547 PRK14055, PRK14055, aromatic amino acid hydroxylase; Provisional

 Score = 49.7 bits (118), Expect = 3e-06
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query: 539 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 598
           T FS  PV+G ++   +L+ L  R F     +R   K  ++  PD+ H+LLGHVP    P
Sbjct: 153 THFSYYPVSGFVAPHQYLSLLQDRYFPIASVMRTLDKDNFSLTPDLIHDLLGHVPWLLHP 212

Query: 599 SFAQFSQEIG 608
           SF++F   +G
Sbjct: 213 SFSEFFINMG 222

Length = 362

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 47.6 bits (114), Expect = 1e-05
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           T+ I G   G G  AIQ+ KA+G  VF + G     A    LGAD  +++ 
Sbjct: 142 TVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYR 192

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|214444 MTH00165, ND5, NADH dehydrogenase subunit 5; Provisional

 Score = 47.8 bits (115), Expect = 1e-05
 Identities = 17/69 (24%), Positives = 21/69 (30%), Gaps = 13/69 (18%)

Query: 210 FFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCH----------SCPFS 259
               FFF FF     FF   +F    +  F  + L S   + S            S  F 
Sbjct: 4   CLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFS---LNSSSIVMTFLFDWMSLLFM 60

Query: 260 LFDFVIFSN 268
            F   I S 
Sbjct: 61  SFVLFISSM 69

Length = 573

>gnl|CDD|153177 cd04905, ACT_CM-PDT, C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 271 DEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC---APGGDLSSVIESLRSS 327
           ++ GAL   L +F +  +NL  IESR S      Y F ++        +++  +E L+  
Sbjct: 10  NKPGALYDVLGVFAERGINLTKIESRPSKGGLWEYVFFIDFEGHIEDPNVAEALEELKRL 69

Query: 328 CSYINII 334
             ++ ++
Sbjct: 70  TEFVKVL 76

The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe binding. L-Phe binds with positive cooperativity; with this binding, there is a shift in the protein to less active tetrameric and higher oligomeric forms from a more active dimeric form. Members of this CD belong to the superfamily of ACT regulatory domains. Length = 80

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
           DT+ ++GA  G GL A Q+ KA G  V  +      +  A  LGAD+V+D+  +E D   
Sbjct: 136 DTVLVLGAG-GVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDY--KEEDLEE 192

Query: 172 NQILSYGSELDA 183
              L+ G   D 
Sbjct: 193 ELRLTGGGGADV 204

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 45.8 bits (109), Expect = 4e-05
 Identities = 22/50 (44%), Positives = 28/50 (56%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD 161
           DT+ + GA  G G+ AIQ+ KA G  V A    P  +     LGADYV+D
Sbjct: 164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVID 213

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|214444 MTH00165, ND5, NADH dehydrogenase subunit 5; Provisional

 Score = 45.9 bits (110), Expect = 5e-05
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 6/58 (10%)

Query: 210 FFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFS---LFDFV 264
                  FFF FF     +F   +F    +  F+      + S +S       LFD++
Sbjct: 1   MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWE---LFSLNSSSIVMTFLFDWM 55

Length = 573

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.5 bits (106), Expect = 1e-04
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKAYGLGADYVVDHT 163
             + I GA+ G G  A+Q+ KA G  V     C          LGAD V+D+T
Sbjct: 145 QRVLINGASGGVGTFAVQIAKALGAHVTGV--CSTRNAELVRSLGADEVIDYT 195

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|214460 MTH00212, ND6, NADH dehydrogenase subunit 6; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/54 (24%), Positives = 15/54 (27%)

Query: 199 YFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQS 252
           Y   L+ N   FF  +F  F         Y          F   L L   L  S
Sbjct: 67  YMVALSPNEHLFFKKYFKGFGMILISLNLYLLLMTLGSSNFSPMLNLKLELNVS 120

Length = 160

>gnl|CDD|237598 PRK14056, PRK14056, phenylalanine 4-monooxygenase; Provisional

 Score = 43.5 bits (103), Expect = 3e-04
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 3/35 (8%)

Query: 577 LYTPEPDVCHELLGHVPLFADPSFAQFSQ---EIG 608
            YTP PD+ HE  GH P+ ADP++A++ +   EIG
Sbjct: 113 EYTPAPDIIHEAAGHAPILADPTYAEYLRRFGEIG 147

Length = 578

>gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 43.2 bits (103), Expect = 3e-04
 Identities = 12/57 (21%), Positives = 17/57 (29%)

Query: 211 FFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFS 267
           F F   F     F    ++      F   F F+LL        +   F   D + F 
Sbjct: 4   FLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFG 60

Length = 445

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 3e-04
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD 161
           + +T+ + GA  G G+ AIQV KA G  V A        AK     ADYV+ 
Sbjct: 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSE-SKAKIVSKYADYVIV 212

Length = 334

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 42.5 bits (101), Expect = 4e-04
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 113 TLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLGADYVVDH 162
           TL IIG   G G  AIQ+ K    LTV A+   P  +A    LGAD+V++H
Sbjct: 152 TLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINH 202

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 42.3 bits (100), Expect = 5e-04
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD 161
           +T+ + GA+ G G A +Q+ K  G  V A  G          LGAD V+ 
Sbjct: 179 ETVLVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVRALGADTVIL 227

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 42.0 bits (99), Expect = 6e-04
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHT 163
            +   L IIG   G G   IQ+ +   GLTV A+   P        LGA +V+DH+
Sbjct: 147 GDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHS 202

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 41.8 bits (99), Expect = 7e-04
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDR-- 169
           DTL I G     GLAA+++ KA G TV A+   P   A    LGAD VV      +D   
Sbjct: 144 DTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVV------IDDGA 197

Query: 170 FANQILSYGSELDA 183
            A Q+ +     D 
Sbjct: 198 IAEQLRAAPGGFDK 211

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.9 bits (99), Expect = 7e-04
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
            T+ I G   G G  A+Q+ K  GL V  +            LGAD+V+D+ 
Sbjct: 143 RTILITGGAGGVGSFAVQLAKRAGLRVITTCS-KRNFEYVKSLGADHVIDYN 193

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|177159 MTH00097, ND6, NADH dehydrogenase subunit 6; Provisional

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 7/48 (14%)

Query: 205 FNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFF-------FYFFYFLLL 245
               +  FF  F   FFFFFF+F+  +FF          +Y  ++L++
Sbjct: 47  LKKPYLVFFSLFLSMFFFFFFYFFKVYFFSNLSLNVFELYYNIFWLIV 94

Length = 121

>gnl|CDD|223155 COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism]

 Score = 41.4 bits (98), Expect = 8e-04
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 271 DEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD---LSSVIESLRSS 327
           ++ GAL K L +F K  +NL  IESR        Y F ++     D   +   +E L+  
Sbjct: 203 NKPGALYKALGVFAKRGINLTKIESRPLKTGLGEYLFFIDIEGHIDDPLVKEALEELKEI 262

Query: 328 CSYINII 334
             ++ I+
Sbjct: 263 TEFVKIL 269

Length = 279

>gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 41.7 bits (99), Expect = 9e-04
 Identities = 9/38 (23%), Positives = 12/38 (31%)

Query: 209 HFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLS 246
               F    ++      F   F F   F   FYF  +S
Sbjct: 12  IPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNIS 49

Length = 445

>gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 41.7 bits (99), Expect = 0.001
 Identities = 8/39 (20%), Positives = 12/39 (30%)

Query: 205 FNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFL 243
             +    ++      F   F F   F   F+F    YF 
Sbjct: 14  LCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFF 52

Length = 445

>gnl|CDD|214445 MTH00166, ND6, NADH dehydrogenase subunit 6; Provisional

 Score = 39.8 bits (94), Expect = 0.001
 Identities = 12/55 (21%), Positives = 13/55 (23%), Gaps = 7/55 (12%)

Query: 199 YFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFF-------FFFFYFFYFLLLS 246
           Y   LA N K  F       F          F            F +F     LS
Sbjct: 66  YITSLASNEKFKFSLKLLILFLLMLLLMLNNFIKNSEMSNFNNNFNFFENSFSLS 120

Length = 160

>gnl|CDD|177158 MTH00095, ND5, NADH dehydrogenase subunit 5; Provisional

 Score = 41.4 bits (98), Expect = 0.001
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 213 FFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLS 246
           FF F FF  F F  +YFF F FF       LLL+
Sbjct: 140 FFIFLFFSGFIFSSYYFFSFSFFSSSMILMLLLT 173

Length = 527

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 40.6 bits (96), Expect = 0.002
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
              T+ I GA  G G  A+Q+ KA G  V A+            LGAD V+D+T
Sbjct: 144 AGQTVLIHGAAGGVGSFAVQLAKARGARVIATAS-AANADFLRSLGADEVIDYT 196

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 40.4 bits (96), Expect = 0.002
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 122 GNGLAAIQVGKAYGLTVFASVGCP--VGVAKAYGLGADYVVDHTIRELDRFANQIL 175
           G G AAIQ+ +  G  VFA+ G P      +A G+  D++     R+L  FA++IL
Sbjct: 115 GVGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSS--RDLS-FADEIL 167

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|177157 MTH00094, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 40.7 bits (96), Expect = 0.002
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 203 LAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLL 245
           L F +  F FF F  FF F  F  + +   FFFF  F + LL+
Sbjct: 3   LLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLI 45

Length = 403

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 40.3 bits (95), Expect = 0.002
 Identities = 18/51 (35%), Positives = 25/51 (49%)

Query: 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD 161
            D++ I  A+   GLAAIQ+  A G TV A+            LGA +V+ 
Sbjct: 145 GDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIV 195

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|177152 MTH00087, ATP6, ATP synthase F0 subunit 6; Provisional

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 9/58 (15%), Positives = 16/58 (27%)

Query: 210 FFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFS 267
            FF   F F F   +  ++           F+ LL+      +       +  F    
Sbjct: 4   VFFLDVFMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYSNKLPLSSVISFFTFIV 61

Length = 195

>gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 40.1 bits (95), Expect = 0.003
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 210 FFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLS 246
                F+ +       FF   FF    F ++  ++L+
Sbjct: 154 LLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLSMILA 190

Length = 445

>gnl|CDD|214443 MTH00163, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 40.1 bits (95), Expect = 0.003
 Identities = 8/37 (21%), Positives = 10/37 (27%)

Query: 210 FFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLS 246
           F   F     F    ++      F   F F     LS
Sbjct: 6   FMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLS 42

Length = 445

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 4/68 (5%)

Query: 206 NYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSC----HSCPFSLF 261
           N+K+F  F  +   +        F++  +       F  L   L  S      S  F LF
Sbjct: 83  NHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLF 142

Query: 262 DFVIFSNH 269
              +   H
Sbjct: 143 LSFLLFFH 150

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|177157 MTH00094, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 39.5 bits (93), Expect = 0.004
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 210 FFFFFFFFFFFFFFFFFFYFFFFF-------FFFFYFFYFLLLS 246
              FFF  F FF F  FF F  F        FFFF  F F+LL 
Sbjct: 2   SLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLI 45

Length = 403

>gnl|CDD|214457 MTH00205, ND4, NADH dehydrogenase subunit 4; Provisional

 Score = 39.6 bits (93), Expect = 0.004
 Identities = 16/42 (38%), Positives = 16/42 (38%)

Query: 209 HFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLI 250
            FF        FF  FFF   F    F    F F  LS PLI
Sbjct: 22  SFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLI 63

Length = 448

>gnl|CDD|237013 PRK11898, PRK11898, prephenate dehydratase; Provisional

 Score = 39.0 bits (92), Expect = 0.004
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC-APGGD--LSSV 320
           ++ +   +  GAL K L  F    +NL  IESR +      Y F ++      D  ++  
Sbjct: 199 LVLTLPNNLPGALYKALSEFAWRGINLTRIESRPTKTGLGTYFFFIDVEGHIDDVLVAEA 258

Query: 321 IESLRSSCSYINII 334
           ++ L +    + ++
Sbjct: 259 LKELEALGEDVKVL 272

Length = 283

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 39.3 bits (92), Expect = 0.004
 Identities = 20/52 (38%), Positives = 26/52 (50%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           D + +  A  G G   +Q+ KA G TV  + G P   A    LGAD  VD+T
Sbjct: 144 DVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYT 195

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	655
KOG3820|consensus	461		100.0
TIGR01268	436	Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetra	100.0
TIGR01270	464	Trp_5_monoox tryptophan 5-monooxygenase, tetrameri	100.0
TIGR01269	457	Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric.	100.0
PF00351	332	Biopterin_H: Biopterin-dependent aromatic amino ac	100.0
cd03347	306	eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (e	100.0
cd03345	298	eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH);	100.0
cd03346	287	eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH)	100.0
PRK11913	275	phhA phenylalanine 4-monooxygenase; Reviewed	100.0
cd03348	228	pro_PheOH Prokaryotic phenylalanine-4-hydroxylase	100.0
cd00361	221	arom_aa_hydroxylase Biopterin-dependent aromatic a	100.0
TIGR01267	248	Phe4hydrox_mono phenylalanine-4-hydroxylase, monom	100.0
PRK14055	362	aromatic amino acid hydroxylase; Provisional	100.0
PRK14056	578	phenylalanine 4-monooxygenase; Provisional	100.0
COG3186	291	Phenylalanine-4-hydroxylase [Amino acid transport	100.0
cd03348	228	pro_PheOH Prokaryotic phenylalanine-4-hydroxylase	99.97
TIGR01267	248	Phe4hydrox_mono phenylalanine-4-hydroxylase, monom	99.97
cd00361	221	arom_aa_hydroxylase Biopterin-dependent aromatic a	99.97
PRK11913	275	phhA phenylalanine 4-monooxygenase; Reviewed	99.97
cd03346	287	eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH)	99.96
cd03347	306	eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (e	99.96
cd03345	298	eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH);	99.96
COG3186	291	Phenylalanine-4-hydroxylase [Amino acid transport	99.96
TIGR01269	457	Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric.	99.95
TIGR01268	436	Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetra	99.95
TIGR01270	464	Trp_5_monoox tryptophan 5-monooxygenase, tetrameri	99.95
PRK14055	362	aromatic amino acid hydroxylase; Provisional	99.94
PRK14056	578	phenylalanine 4-monooxygenase; Provisional	99.94
PF00351	332	Biopterin_H: Biopterin-dependent aromatic amino ac	99.94
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	99.92
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	99.9
KOG3820|consensus	461		99.89
KOG1197|consensus	336		99.86
KOG0023|consensus	360		99.83
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	99.78
KOG0024|consensus	354		99.78
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.78
KOG1198|consensus	347		99.77
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	99.77
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	99.77
PLN02178	375	cinnamyl-alcohol dehydrogenase	99.76
PLN02586	360	probable cinnamyl alcohol dehydrogenase	99.76
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	99.76
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	99.75
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	99.75
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.75
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	99.75
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	99.74
PLN02740	381	Alcohol dehydrogenase-like	99.74
PLN02827	378	Alcohol dehydrogenase-like	99.73
COG0077	279	PheA Prephenate dehydratase [Amino acid transport	99.72
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	99.72
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	99.71
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	99.71
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	99.71
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	99.71
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.7
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	99.7
PLN02514	357	cinnamyl-alcohol dehydrogenase	99.69
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	99.69
PRK11899	279	prephenate dehydratase; Provisional	99.69
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	99.68
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	99.66
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	99.66
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	99.65
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	99.65
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	99.64
cd04904	74	ACT_AAAH ACT domain of the nonheme iron-dependent,	99.64
PRK11898	283	prephenate dehydratase; Provisional	99.64
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	99.63
KOG1196|consensus	343		99.62
KOG0022|consensus	375		99.62
PRK10622	386	pheA bifunctional chorismate mutase/prephenate deh	99.61
PLN02317	382	arogenate dehydratase	99.61
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	99.61
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	99.6
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	99.6
KOG1202|consensus	2376		99.59
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	99.58
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	99.57
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	99.56
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	99.56
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	99.56
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.56
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.56
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.55
cd04930	115	ACT_TH ACT domain of the nonheme iron-dependent ar	99.55
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.55
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.54
cd04929	74	ACT_TPH ACT domain of the nonheme iron-dependent a	99.54
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	99.53
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.53
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	99.52
cd04931	90	ACT_PAH ACT domain of the nonheme iron-dependent a	99.52
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.52
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.52
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.52
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	99.52
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.51
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.51
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	99.51
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.51
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.51
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	99.51
PTZ00354	334	alcohol dehydrogenase; Provisional	99.5
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	99.5
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.5
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	99.5
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.49
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	99.49
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.49
KOG0025|consensus	354		99.49
PRK10083	339	putative oxidoreductase; Provisional	99.49
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.48
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.48
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	99.48
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.48
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.48
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	99.48
cd04880	75	ACT_AAAH-PDT-like ACT domain of the nonheme iron-d	99.46
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.46
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	99.46
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.46
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.46
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.45
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.45
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.45
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.44
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.44
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.43
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.43
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.43
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.43
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.42
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.42
cd04905	80	ACT_CM-PDT C-terminal ACT domain of the bifunction	99.41
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.41
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.41
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.4
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.39
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.39
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.39
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.39
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.38
PLN02702	364	L-idonate 5-dehydrogenase	99.37
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.37
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.37
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.37
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.37
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.35
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.35
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.32
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.31
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.31
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.31
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.31
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.31
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.31
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.31
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.3
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.29
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.29
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.29
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.28
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.26
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.24
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.24
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.22
KOG2797|consensus	377		99.12
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.9
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	98.89
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.15
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.14
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.12
PLN02494	477	adenosylhomocysteinase	98.02
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.79
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.77
PRK05693	274	short chain dehydrogenase; Provisional	97.74
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.68
PRK08818	370	prephenate dehydrogenase; Provisional	97.63
PRK12742	237	oxidoreductase; Provisional	97.61
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.6
PRK06182	273	short chain dehydrogenase; Validated	97.59
PRK08324	681	short chain dehydrogenase; Validated	97.52
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.52
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.52
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.5
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.49
PRK05993	277	short chain dehydrogenase; Provisional	97.36
PRK07109	334	short chain dehydrogenase; Provisional	97.34
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.32
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.31
PRK07806	248	short chain dehydrogenase; Provisional	97.28
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.27
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.25
PLN03209	576	translocon at the inner envelope of chloroplast su	97.25
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.25
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.22
PRK06139	330	short chain dehydrogenase; Provisional	97.22
PRK06500	249	short chain dehydrogenase; Provisional	97.2
PRK07831	262	short chain dehydrogenase; Provisional	97.17
PRK05872	296	short chain dehydrogenase; Provisional	97.16
PRK08265	261	short chain dehydrogenase; Provisional	97.16
PRK07060	245	short chain dehydrogenase; Provisional	97.14
PRK07832	272	short chain dehydrogenase; Provisional	97.13
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.12
PRK07576	264	short chain dehydrogenase; Provisional	97.1
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.1
cd04886	73	ACT_ThrD-II-like C-terminal ACT domain of biodegra	97.09
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.08
PRK12829	264	short chain dehydrogenase; Provisional	97.07
PRK08339	263	short chain dehydrogenase; Provisional	97.04
PRK06057	255	short chain dehydrogenase; Provisional	97.03
PRK08017	256	oxidoreductase; Provisional	97.03
PRK12939	250	short chain dehydrogenase; Provisional	97.03
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.01
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.99
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.99
PRK06949	258	short chain dehydrogenase; Provisional	96.99
PRK08267	260	short chain dehydrogenase; Provisional	96.98
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.98
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	96.97
PRK06841	255	short chain dehydrogenase; Provisional	96.97
PRK06128	300	oxidoreductase; Provisional	96.96
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.95
PF01842	66	ACT: ACT domain; InterPro: IPR002912 The ACT domai	96.95
PRK12828	239	short chain dehydrogenase; Provisional	96.94
PRK07814	263	short chain dehydrogenase; Provisional	96.93
PRK09242	257	tropinone reductase; Provisional	96.92
PRK06180	277	short chain dehydrogenase; Provisional	96.9
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.87
PRK07825	273	short chain dehydrogenase; Provisional	96.86
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.86
PRK06101	240	short chain dehydrogenase; Provisional	96.85
PRK07326	237	short chain dehydrogenase; Provisional	96.85
PRK07062	265	short chain dehydrogenase; Provisional	96.82
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.82
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	96.77
PRK07478	254	short chain dehydrogenase; Provisional	96.77
PRK08177	225	short chain dehydrogenase; Provisional	96.74
PRK05866	293	short chain dehydrogenase; Provisional	96.73
PRK05854	313	short chain dehydrogenase; Provisional	96.72
PRK06196	315	oxidoreductase; Provisional	96.72
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.71
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.67
PRK05876	275	short chain dehydrogenase; Provisional	96.67
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.66
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.66
PRK06194	287	hypothetical protein; Provisional	96.65
PRK06198	260	short chain dehydrogenase; Provisional	96.65
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.65
PRK07890	258	short chain dehydrogenase; Provisional	96.65
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.65
PRK07677	252	short chain dehydrogenase; Provisional	96.64
PRK07774	250	short chain dehydrogenase; Provisional	96.64
PRK09186	256	flagellin modification protein A; Provisional	96.63
PRK09291	257	short chain dehydrogenase; Provisional	96.61
PRK06483	236	dihydromonapterin reductase; Provisional	96.61
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.61
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.6
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.59
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.59
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.59
KOG1205|consensus	282		96.58
PRK07063	260	short chain dehydrogenase; Provisional	96.57
KOG1201|consensus	300		96.55
PRK08589	272	short chain dehydrogenase; Validated	96.54
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.54
CHL00194	317	ycf39 Ycf39; Provisional	96.53
PRK08862	227	short chain dehydrogenase; Provisional	96.53
PRK07024	257	short chain dehydrogenase; Provisional	96.53
PRK12937	245	short chain dehydrogenase; Provisional	96.52
PRK08703	239	short chain dehydrogenase; Provisional	96.51
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.51
PLN02780	320	ketoreductase/ oxidoreductase	96.51
PRK07985	294	oxidoreductase; Provisional	96.5
PRK06701	290	short chain dehydrogenase; Provisional	96.5
PRK12367	245	short chain dehydrogenase; Provisional	96.49
PRK07904	253	short chain dehydrogenase; Provisional	96.49
PRK06125	259	short chain dehydrogenase; Provisional	96.49
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.49
PRK05867	253	short chain dehydrogenase; Provisional	96.49
COG2910	211	Putative NADH-flavin reductase [General function p	96.48
PRK08264	238	short chain dehydrogenase; Validated	96.47
PRK06172	253	short chain dehydrogenase; Provisional	96.47
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.45
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.44
PRK06953	222	short chain dehydrogenase; Provisional	96.44
PRK07035	252	short chain dehydrogenase; Provisional	96.43
PLN02253	280	xanthoxin dehydrogenase	96.43
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.42
PRK05717	255	oxidoreductase; Validated	96.42
PRK07856	252	short chain dehydrogenase; Provisional	96.41
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.4
PRK06484	520	short chain dehydrogenase; Validated	96.4
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.4
PRK08226	263	short chain dehydrogenase; Provisional	96.4
PRK06114	254	short chain dehydrogenase; Provisional	96.39
PRK06181	263	short chain dehydrogenase; Provisional	96.37
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.37
PRK09072	263	short chain dehydrogenase; Provisional	96.37
PRK05884	223	short chain dehydrogenase; Provisional	96.36
PRK06179	270	short chain dehydrogenase; Provisional	96.36
PRK08628	258	short chain dehydrogenase; Provisional	96.36
PRK08643	256	acetoin reductase; Validated	96.35
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.35
PRK08263	275	short chain dehydrogenase; Provisional	96.35
PRK08251	248	short chain dehydrogenase; Provisional	96.34
PRK06138	252	short chain dehydrogenase; Provisional	96.33
PRK07454	241	short chain dehydrogenase; Provisional	96.32
KOG0725|consensus	270		96.32
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.31
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.31
PRK05875	276	short chain dehydrogenase; Provisional	96.29
PRK06482	276	short chain dehydrogenase; Provisional	96.29
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.28
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.28
PRK07067	257	sorbitol dehydrogenase; Provisional	96.27
PRK06484	520	short chain dehydrogenase; Validated	96.25
PRK12743	256	oxidoreductase; Provisional	96.25
KOG1014|consensus	312		96.23
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.22
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.21
PRK07102	243	short chain dehydrogenase; Provisional	96.21
PRK06523	260	short chain dehydrogenase; Provisional	96.2
PRK08303	305	short chain dehydrogenase; Provisional	96.19
PRK10538	248	malonic semialdehyde reductase; Provisional	96.19
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.18
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.18
PRK06398	258	aldose dehydrogenase; Validated	96.16
PRK06720	169	hypothetical protein; Provisional	96.15
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.15
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.14
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.14
PRK06197	306	short chain dehydrogenase; Provisional	96.11
PRK06914	280	short chain dehydrogenase; Provisional	96.1
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.09
PRK07791	286	short chain dehydrogenase; Provisional	96.08
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.06
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.06
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.05
cd04884	72	ACT_CBS C-terminal ACT domain of the cystathionine	96.04
PRK08278	273	short chain dehydrogenase; Provisional	96.03
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.03
PRK07402	196	precorrin-6B methylase; Provisional	96.02
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.01
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.99
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.98
PRK07775	274	short chain dehydrogenase; Provisional	95.97
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.97
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	95.94
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.94
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.92
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.9
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.89
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.89
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.86
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.86
PRK07074	257	short chain dehydrogenase; Provisional	95.83
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.82
PRK05650	270	short chain dehydrogenase; Provisional	95.81
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	95.8
PRK09135	249	pteridine reductase; Provisional	95.78
KOG1209|consensus	289		95.78
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.78
PRK05855	582	short chain dehydrogenase; Validated	95.77
PRK05599	246	hypothetical protein; Provisional	95.76
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.73
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	95.73
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	95.71
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	95.7
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.7
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	95.69
PRK09134	258	short chain dehydrogenase; Provisional	95.68
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.68
PRK04148	134	hypothetical protein; Provisional	95.66
TIGR00438	188	rrmJ cell division protein FtsJ.	95.64
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.62
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.62
cd04888	76	ACT_PheB-BS C-terminal ACT domain of a small (~147	95.56
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.56
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.55
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.55
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.54
PRK07069	251	short chain dehydrogenase; Validated	95.52
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.52
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	95.52
PRK07577	234	short chain dehydrogenase; Provisional	95.45
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.45
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.44
PF13710	63	ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B.	95.44
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.42
PRK08219	227	short chain dehydrogenase; Provisional	95.42
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.41
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.41
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.41
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.4
cd04882	65	ACT_Bt0572_2 C-terminal ACT domain of a novel prot	95.38
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.37
KOG1200|consensus	256		95.37
PRK12935	247	acetoacetyl-CoA reductase; Provisional	95.32
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.24
PRK12746	254	short chain dehydrogenase; Provisional	95.2
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.17
PRK14967	223	putative methyltransferase; Provisional	95.17
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.16
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.12
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	95.11
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.08
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.06
PRK07201	657	short chain dehydrogenase; Provisional	95.05
cd04878	72	ACT_AHAS N-terminal ACT domain of the Escherichia	95.04
PRK12744	257	short chain dehydrogenase; Provisional	95.01
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.01
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.96
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.92
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	94.92
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	94.88
cd04874	72	ACT_Af1403 N-terminal ACT domain of the yet unchar	94.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	94.86
PRK08317	241	hypothetical protein; Provisional	94.85
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.84
PRK06737	76	acetolactate synthase 1 regulatory subunit; Valida	94.84
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.84
KOG1210|consensus	331		94.83
PRK11207	197	tellurite resistance protein TehB; Provisional	94.81
cd04885	68	ACT_ThrD-I Tandem C-terminal ACT domains of threon	94.79
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	94.77
PRK06947	248	glucose-1-dehydrogenase; Provisional	94.74
PRK06123	248	short chain dehydrogenase; Provisional	94.73
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	94.68
KOG1208|consensus	314		94.68
PRK12747	252	short chain dehydrogenase; Provisional	94.66
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	94.66
PRK07041	230	short chain dehydrogenase; Provisional	94.65
PLN00015	308	protochlorophyllide reductase	94.64
COG4122	219	Predicted O-methyltransferase [General function pr	94.64
PRK12824	245	acetoacetyl-CoA reductase; Provisional	94.63
PLN00016	378	RNA-binding protein; Provisional	94.63
TIGR01124	499	ilvA_2Cterm threonine ammonia-lyase, biosynthetic,	94.6
PLN02686	367	cinnamoyl-CoA reductase	94.6
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.59
PRK08198	404	threonine dehydratase; Provisional	94.57
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	94.52
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	94.49
cd04887	74	ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-te	94.47
PRK12827	249	short chain dehydrogenase; Provisional	94.47
PLN02653	340	GDP-mannose 4,6-dehydratase	94.46
cd04883	72	ACT_AcuB C-terminal ACT domain of the Bacillus sub	94.46
PRK07023	243	short chain dehydrogenase; Provisional	94.45
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	94.44
PRK01581	374	speE spermidine synthase; Validated	94.41
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.36
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.34
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	94.31
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	94.31
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.28
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.28
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.25
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.25
PLN02476	278	O-methyltransferase	94.22
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	94.19
COG4492	150	PheB ACT domain-containing protein [General functi	94.18
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	94.18
COG1028	251	FabG Dehydrogenases with different specificities (	94.17
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	94.17
PRK04435	147	hypothetical protein; Provisional	94.15
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.12
KOG1502|consensus	327		94.07
PRK00811	283	spermidine synthase; Provisional	94.06
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.06
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.06
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	93.98
PLN02427	386	UDP-apiose/xylose synthase	93.97
PLN02244	340	tocopherol O-methyltransferase	93.96
TIGR01127	380	ilvA_1Cterm threonine dehydratase, medium form. A	93.96
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	93.91
cd02116	60	ACT ACT domains are commonly involved in specifica	93.89
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	93.82
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	93.81
PF13291	80	ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A.	93.79
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	93.76
PLN02583	297	cinnamoyl-CoA reductase	93.75
PRK11895	161	ilvH acetolactate synthase 3 regulatory subunit; R	93.7
PLN02214	342	cinnamoyl-CoA reductase	93.7
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	93.67
PRK07334	403	threonine dehydratase; Provisional	93.64
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	93.61
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	93.55
KOG1203|consensus	411		93.54
PRK06382	406	threonine dehydratase; Provisional	93.48
PRK07578	199	short chain dehydrogenase; Provisional	93.48
PLN00203	519	glutamyl-tRNA reductase	93.48
PRK08655	437	prephenate dehydrogenase; Provisional	93.47
PLN00198	338	anthocyanidin reductase; Provisional	93.47
PLN02366	308	spermidine synthase	93.43
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	93.39
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	93.39

>KOG3820|consensus

Probab=100.00  E-value=5.5e-106  Score=832.36  Aligned_cols=355  Identities=54%  Similarity=0.835  Sum_probs=334.2

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEecCCC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINIISRNH  338 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iLGs~~  338 (655)
                      ..++++|++++ ++|+|+++|++|+..++|+.||||||++....+|++||++++ ..++.++++.|++.+..+....+.+
T Consensus        35 ~~~~~if~~r~-~~~~l~~~Lk~f~~~~vnl~HiEsR~s~~~~~~~evlv~~~~~~~~l~~~i~~lrq~~~~~~~~s~~~  113 (461)
T KOG3820|consen   35 ARISLIFSLRN-KVGALARALKAFEEFHVNLLHIESRPSERRSSGYEVLVELDATRGQLIQAIELLRQNHVALSYFSSFN  113 (461)
T ss_pred             ceEEEEEEecc-cchHHHHHHHHhhhcCceEEEeecccccccCCCceEEEeeccchhhHHHHHHHHHHhcccceecccch
Confidence            36789999999 899999999999999999999999999999999999999999 7899999999999986555554443


Q ss_pred             C-----CCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC--------------
Q psy14589        339 N-----QFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL--------------  399 (655)
Q Consensus       339 ~-----~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~--------------  399 (655)
                      .     .+.++|||||+|+|||+|+|+|+|||++||+|||||+|++||+||+++|+||.|||||||              
T Consensus       114 ~~~~~~~~~~vpWFPr~IsdLD~can~vl~Yg~eLDadHPGFkD~vYR~RRk~fadiA~nyKhGdpIP~veYT~eEikTW  193 (461)
T KOG3820|consen  114 RDLKDNKNTSVPWFPRKISDLDQCANRVLKYGPELDADHPGFKDPVYRQRRKFFADIAFNYKHGDPIPRVEYTEEEIKTW  193 (461)
T ss_pred             hhhhhccCCCCCccccchhHHHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcccCCCCCccccCHHHHHHH
Confidence            2     247899999999999999999999999999999999999999999999999999999998              


Q ss_pred             --------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceee
Q psy14589        400 --------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQ  465 (655)
Q Consensus       400 --------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~  465 (655)
                                    ||+||+++|++|+++|||.+|+||||+|||+|||++|||++|||+||+|+|||+++||||||+|||
T Consensus       194 g~Vf~~L~~Ly~~HAC~ey~~~f~lLe~~cg~~ednIPQLeDVs~FLk~~TGF~lRPvAGlLSaRDFLagLAFRVFhcTQ  273 (461)
T KOG3820|consen  194 GTVFRTLTDLYPTHACAEYLDNFPLLEKYCGYREDNIPQLEDVSKFLKKKTGFRLRPVAGLLSARDFLAGLAFRVFHCTQ  273 (461)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCcCCCCcchHHHHHHHHHhccCceeecccccCcHHHHHhhhhhhheeeee
Confidence                          999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee
Q psy14589        466 YIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP  545 (655)
Q Consensus       466 ~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~  545 (655)
                      ||||+++|+||||||+|||++||||||+||.||||+|+|||++||+|+|+|++|+++||||||||||++.     +++|+
T Consensus       274 YiRH~s~P~yTPEPD~cHELLGHvPLfADp~FAQFSQEIGLASLGAsDe~IEKLaTlywFtVEFGLCkq~-----g~~Ka  348 (461)
T KOG3820|consen  274 YIRHHSSPFYTPEPDTCHELLGHVPLFADPSFAQFSQEIGLASLGASDEDIEKLATLYWFTVEFGLCKQD-----GELKA  348 (461)
T ss_pred             eeecCCCCCCCCCCchHHHHhccchhccChhHHHHhHHhhhhhcCCCHHHHHHhheeeEEEEEEeeeccC-----Ceeee
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999     99999


Q ss_pred             -cccccCCHHHHHhhhc-----ccc-----cccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCC
Q psy14589        546 -VAGLLSSRDFLAGLAF-----RVF-----HSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA  614 (655)
Q Consensus       546 -g~Gllss~~~~~~l~~-----~~f-----~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a  614 (655)
                       |||||||.||+.|+..     +.|     +++.|+.+.+|+.|.. .|.|||....+.        .|...|     ++
T Consensus       349 yGAGLLSS~gEL~hals~~pei~~FdP~vt~vq~y~it~yQp~Yfv-aeSFedAk~KlR--------~fa~ti-----~R  414 (461)
T KOG3820|consen  349 YGAGLLSSYGELQHALSDKPEIKDFDPEVTAVQKYLITTYQPLYFV-AESFEDAKEKLR--------KFASTI-----KR  414 (461)
T ss_pred             echhhhhhHHHHHHHhcCCccccCCCccceeeeeccccccccceee-hhhHHHHHHHHH--------HHHHhC-----CC
Confidence             9999999999999975     455     6778999999999999 699999987776        555554     99


Q ss_pred             ceEEEeecccccCccccccCch
Q psy14589        615 PYLFYYVCHELLGHVPLFADPS  636 (655)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~  636 (655)
                      ||.|+|  +|+|++|-|+|+..
T Consensus       415 PF~Vry--npyT~svEvLds~~  434 (461)
T KOG3820|consen  415 PFSVRY--NPYTQSVEVLDSSA  434 (461)
T ss_pred             Cceeee--ccccceehhhcCHH
Confidence            999999  99999999999863

>TIGR01268 Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetrameric form

Probab=100.00  E-value=4.7e-102  Score=834.74  Aligned_cols=354  Identities=58%  Similarity=0.898  Sum_probs=324.5

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccC-CcEEEecC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSC-SYINIISR  336 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~-~~v~iLGs  336 (655)
                      +|+|++|++++ ++|+|+++|+.|++++|||+||||||++..+|+|.|||||++  ++++++++++|++.+ ..++++|+
T Consensus        15 ~KTSLiFsL~d-~pGaL~~vL~vFa~~gINLthIESRPsk~~~~eY~FFVD~eg~~~~~v~~aL~~Lk~~~~~~vkiLGs   93 (436)
T TIGR01268        15 AKTSLIFSLKE-EAGALAETLKLFQAHDVNLTHIESRPSKTHPGEYEFFVEFDEASDRKLEGVIEHLRQKAEVTVNILSR   93 (436)
T ss_pred             CeEEEEEEcCC-CCcHHHHHHHHHHHCCCCeeEEecccCCCCCccEEEEEEEecCccHHHHHHHHHHHHhccceEEEeCC
Confidence            38999999998 899999999999999999999999999999999999999999  589999999999999 89999999


Q ss_pred             CCCCC-CCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC----------------
Q psy14589        337 NHNQF-HGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL----------------  399 (655)
Q Consensus       337 ~~~~~-~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~----------------  399 (655)
                      +++.+ ..||||||||+|||+|+|++|+||+||++|||||+|++||+||++||++|.+||+|++                
T Consensus        94 ~~~~~~~~vpWFPr~isDLD~~~~~vl~yg~~l~~dHPgf~d~~yr~rr~~~a~~a~~y~~g~~ip~v~YT~~e~~~W~~  173 (436)
T TIGR01268        94 DNKQNKDSVPWFPRKINDIDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAFNYKHGQPIPRVEYTDEEIATWRT  173 (436)
T ss_pred             CCcccccCCCCCCCCHHHHHHHhhhhhhccCcccccCcCccCHHHHHHHHHHHHHHhhCCCCCCCCccccCHHHHHHHHH
Confidence            65432 3499999999999999999999999999999999999999999999999999999997                


Q ss_pred             ------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeec
Q psy14589        400 ------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYI  467 (655)
Q Consensus       400 ------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~i  467 (655)
                                  ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||
T Consensus       174 l~~~~~~l~~~~Ac~eyl~~l~~L~~~~g~~~d~IPql~dvs~~L~~~TGw~~~pV~Gll~~~~F~~~LA~r~F~~t~yi  253 (436)
T TIGR01268       174 VFNNLTVLYPTHACQEYNHIFPLLQQNCGFREDNIPQLEDVSQFLQDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYI  253 (436)
T ss_pred             HHHHHHHHhhccccHHHHHHHHHHHHhcCCCccCCCCHHHHHHHHHhccCCEEEecCCcCCHHHHHHHHhcCccceeeee
Confidence                        99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-c
Q psy14589        468 RHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-V  546 (655)
Q Consensus       468 r~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g  546 (655)
                      ||+++|+||||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ |
T Consensus       254 R~~~~~~YtpEPDi~Hel~GHvPlla~p~fA~f~q~~G~~~l~a~~~~i~~LarlyWfTVEFGL~~~~-----~~~k~YG  328 (436)
T TIGR01268       254 RHHSKPMYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDYIEKLATLYWFTIEFGLCKQD-----GEKKAYG  328 (436)
T ss_pred             cccccccCCCCChhHHHHhccchhhCCHHHHHHHHHHHHhhcCCCHHHHHHHhhhheeeeccceecCC-----CceeEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999     99999 9


Q ss_pred             ccccCCHHHHHhhhc-----ccccccc-----cccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCC
Q psy14589        547 AGLLSSRDFLAGLAF-----RVFHSTQ-----YIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGA  614 (655)
Q Consensus       547 ~Gllss~~~~~~l~~-----~~f~~~~-----~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a  614 (655)
                      ||||||.+|++|+..     +.|-...     |..+..|+.|..                -++|.+..+.++  ...++.
T Consensus       329 AGlLSS~gE~~~~ls~~~~~~~fd~~~~~~~~y~i~~~Q~~YFv----------------~~sf~~l~~~~~~~~~~~~~  392 (436)
T TIGR01268       329 AGLLSSFGELQYCLSDKPEVVDFDPEVTCVTKYPITEFQPLYFL----------------AESFEDAKEKLKSFAATIPR  392 (436)
T ss_pred             cchhcCHHHHHHhcCCCCccCCCCHHHHhcCCCCCCCcCCceEE----------------eCCHHHHHHHHHHHHHhCCC
Confidence            999999999999842     4453333     444444555555                444444445443  244689


Q ss_pred             ceEEEeecccccCccccccCchh
Q psy14589        615 PYLFYYVCHELLGHVPLFADPSF  637 (655)
Q Consensus       615 ~~~~~~~~~~~~~~~~~~~~~~~  637 (655)
                      ||.++|  |++|++|-|+|++.-
T Consensus       393 pf~~~y--~~~t~~v~~~~~~~~  413 (436)
T TIGR01268       393 PFSVRY--NAYTQRVEILDKKAQ  413 (436)
T ss_pred             Ccccee--cCccceEEecCCHHH
Confidence            999999  999999999999864

The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PubMed:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered.

>TIGR01270 Trp_5_monoox tryptophan 5-monooxygenase, tetrameric

Probab=100.00  E-value=1.2e-99  Score=817.12  Aligned_cols=357  Identities=46%  Similarity=0.722  Sum_probs=321.2

Q ss_pred             CCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcc-eEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589        257 PFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENN-YEFMVECAP-GGDLSSVIESLRSSCSYINII  334 (655)
Q Consensus       257 ~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~-Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL  334 (655)
                      ...+++||+|++++ ++|+|+++|+.|++++|||+||||||++...|+ |.|||||++ ..++++++++|++.+..+++.
T Consensus        27 ~~~~ktSLIFsL~d-~pGaL~~vL~vFa~~gINLThIESRPsk~~~~e~Y~FfVD~Eg~~~~l~~aL~~Lk~~~~~~~~~  105 (464)
T TIGR01270        27 EGVQRLSIIFSLSN-VVGDLSKAIAIFQDRHINILHLESRDSKDGTSKTMDVLVDVELFHYGLQEAMDLLKSGLDVHEVS  105 (464)
T ss_pred             CCCceEEEEEECCC-CchHHHHHHHHHHHCCCCEEEEECCcCCCCCCccEEEEEEEEcCHHHHHHHHHHHHHhcccceec
Confidence            34459999999999 899999999999999999999999999999999 999999999 778999999999998875553


Q ss_pred             cCCC--------------CCCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-
Q psy14589        335 SRNH--------------NQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-  399 (655)
Q Consensus       335 Gs~~--------------~~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-  399 (655)
                      ..+.              ...++||||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++ 
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~vpWfPr~isdLD~~~~~vl~~~~~l~~dhpgf~d~~yr~rr~~~a~~a~~y~~g~~i  185 (464)
T TIGR01270       106 SPIRPTLIEAQYTEPGSDDATTGVPWFPKKISDLDKCANRVLMYGSELDADHPGFKDTEYRKRRMMFADLALNYKHGEPI  185 (464)
T ss_pred             cccccccccccccccccccccCCCCCCCCCHHHHHHhhhhheeccCcccccCCCCcCHHHHHHHHHHHHHHHhccCCCCC
Confidence            1100              0245699999999999999999999999999999999999999999999999999999987 


Q ss_pred             ---------------------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHH
Q psy14589        400 ---------------------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDF  452 (655)
Q Consensus       400 ---------------------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f  452 (655)
                                                 ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+|
T Consensus       186 p~v~YT~~E~~~W~~l~~~~~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~dvs~~L~~~TGw~~~pV~Gll~~r~F  265 (464)
T TIGR01270       186 PRVEYTEEERKTWGTIYRELRRLYKTHACKEFLDNLPLLEKYCGYREDNIPQLEDVSKFLKAKTGFRLRPVAGYLSARDF  265 (464)
T ss_pred             CccccCHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhcCCCccCCCCHHHHHHHHHhccCCEEEeccccCCHHHH
Confidence                                       99999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhc
Q psy14589        453 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLA  532 (655)
Q Consensus       453 ~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~  532 (655)
                      |++||+|+|||||||||+++|+||||||||||++||||||+||+||+|+|++|++++|+++++|.+|+||||||||||||
T Consensus       266 ~~~LA~R~F~~tqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp~FA~f~q~~G~~sl~a~~e~i~~LarlyWfTVEFGLi  345 (464)
T TIGR01270       266 LSGLAFRVFHCTQYVRHSADPFYTPEPDTCHELLGHMPLLADPSFAQFSQEIGLASLGASEEDIKKLATLYFFTIEFGLC  345 (464)
T ss_pred             HHHHhcCccceeeeeccccccCcCCCCchHHHHhcccchhcCHHHHHHHHHHHHhhcCCCHHHHHHHhHhhhhhhhccce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC-CCCCCCCeEee-cccccCCHHHHHhhhc-----ccccccc-----cccCCCCCCCCCCcchhhhhcCCcccccCchH
Q psy14589        533 SL-SPDSTGFSLRP-VAGLLSSRDFLAGLAF-----RVFHSTQ-----YIRHPSKPLYTPEPDVCHELLGHVPLFADPSF  600 (655)
Q Consensus       533 ~~-~~~~tg~~~~~-g~Gllss~~~~~~l~~-----~~f~~~~-----~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f  600 (655)
                      ++ +     +++|+ |||||||.||++|...     +.|-...     |..+..|+.|..                -++|
T Consensus       346 ~e~~-----g~lkaYGAGlLSS~gEl~~~ls~~~~~~pfd~~~~~~~~Y~i~~~Qp~YFv----------------~~Sf  404 (464)
T TIGR01270       346 KQDD-----EQFKVYGAGLLSSVAELQHALSGSAKIKPFDPDRVCEQECLITTFQNAYFY----------------TRSF  404 (464)
T ss_pred             ecCC-----CCeEEeeceeeCCHHHHHHHccCCCccCCCCHHHHhcCCCCCCCcccceEE----------------eCCH
Confidence            99 8     89999 9999999999999843     4443333     444444444544                4455


Q ss_pred             HHHHHHHh--hcccCCceEEEeecccccCccccccCchh
Q psy14589        601 AQFSQEIG--LASLGAPYLFYYVCHELLGHVPLFADPSF  637 (655)
Q Consensus       601 ~~~~~~~g--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  637 (655)
                      .+..+.++  ...+++||.++|  |++|++|-|+|++.-
T Consensus       405 e~l~~~l~~f~~~~~rpf~~~y--~p~t~~v~vl~~~~~  441 (464)
T TIGR01270       405 EEAKEKMREFTNTIKRPFGVRY--NPYTESVEVLKNSKS  441 (464)
T ss_pred             HHHHHHHHHHHHhcCCCccceE--cCccceEEeeCCHHH
Confidence            55555553  245689999999  999999999999853

This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.

>TIGR01269 Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric

Probab=100.00  E-value=2.7e-97  Score=788.66  Aligned_cols=356  Identities=40%  Similarity=0.627  Sum_probs=316.3

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCC---cceEEEEEecC-CchHHHHHHHHHccCCcE--EEe
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIE---NNYEFMVECAP-GGDLSSVIESLRSSCSYI--NII  334 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~---~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v--~iL  334 (655)
                      .+++.|+++..+.|+|+++|++|++++||++||||||++...   .+|+|||||++ +.++.++++.|++.+...  .+.
T Consensus        37 ~~~~~~~~~~~~~g~L~~~l~~f~~~~inl~hiEsr~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~  116 (457)
T TIGR01269        37 MQNNQFYIRTKEISSLHRILKYIETFKLNLVHFETRPTRTLSNADVDYSCLITLEANEINMSLLIESLRGNSFISGINLL  116 (457)
T ss_pred             ceeEEEEeccCcchhHHHHHHHHHHcCCcEEEeecCCccccCCCCCceEEEEEEeccHhhHHHHHHHHHhhhcccccccc
Confidence            567788888745999999999999999999999999998776   78999999999 888999999999876533  333


Q ss_pred             cCCCCCCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC---------------
Q psy14589        335 SRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL---------------  399 (655)
Q Consensus       335 Gs~~~~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~---------------  399 (655)
                      ++   .+.+||||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|++||+|++               
T Consensus       117 ~~---~~~~vpWfPr~isdLD~~~~~~l~~g~~l~~dhPgf~d~~yr~RR~~~a~~a~~~~~g~~iP~v~YT~eE~~tW~  193 (457)
T TIGR01269       117 NN---QNVKEDWFPKHISELDKCQHLLTKFQPDLDTDHPGFHDKVYRQRREAIAEIAFQYKYGDPIPEVEYTKEEIETWR  193 (457)
T ss_pred             CC---ccccCCCCCCcHHHHHHhhhhhhccCCccccCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcCccCHHHHHHHH
Confidence            22   346799999999999999999999999999999999999999999999999999999997               


Q ss_pred             -------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeee
Q psy14589        400 -------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQY  466 (655)
Q Consensus       400 -------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~  466 (655)
                                   ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+||||||
T Consensus       194 ~l~~rl~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IPqL~dvs~~L~~~TGw~l~pV~GLl~~rdF~~~LA~RvFp~Tqy  273 (457)
T TIGR01269       194 LVFTTMKDLHASHACREYIDAFQLLEKYCNYNSESIPQLQTISEFLHRTTGFRLRPVAGLLSARDFLASLAFRVFQCTQY  273 (457)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhcCCCcCCCCCHHHHHHHHHhccCCEEEeccccCCHHHHHHHHhcCcccceee
Confidence                         9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-
Q psy14589        467 IRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-  545 (655)
Q Consensus       467 ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-  545 (655)
                      |||+++|+||||||||||++||||||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|| 
T Consensus       274 IR~~~~~~YtpEPDi~HEl~GHvPlLadp~FA~F~q~~G~asl~As~e~i~~LarlYWfTVEFGLi~e~-----g~lKaY  348 (457)
T TIGR01269       274 IRHHSSPMHTPEPDCIHELLGHMPMLADRQFAQFSQEIGLASLGASEEEIEKLSTLYWFTVEFGLCKEN-----GETKAY  348 (457)
T ss_pred             ecCccccCCCCCCchHHHHhcccccccCHHHHHHHHHHHHHhcCCCHHHHHHHhHhHhhhhhcccccCC-----CceeEe
Confidence            999999999999999999999999999999999999999999999999999999999999999999999     99999 


Q ss_pred             cccccCCHHHHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEE
Q psy14589        546 VAGLLSSRDFLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLF  618 (655)
Q Consensus       546 g~Gllss~~~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~  618 (655)
                      |||||||.+|+.|...     +.|-...-+|+++.++-.+      +     -++.-++|.+..+.++  ...++.||.+
T Consensus       349 GAGLLSS~GEl~~als~~p~~~pfdp~~~~~t~Y~I~~~Q------p-----~YFV~eSfe~l~~~l~~f~~~~~rPf~v  417 (457)
T TIGR01269       349 GAGLLSSYGELEHAFSDLSEKRPFNPNDAAVQPYQDQGYQ------K-----IYFVTESFEDAKRKLRNYINTSGRPFIV  417 (457)
T ss_pred             eceeecCHHHHHHHcCCCCccCCCCHHHHhcCCCCCCCcC------C-----ceEEeCCHHHHHHHHHHHHHhCCCCcce
Confidence            9999999999999853     3443333344444432222      1     1344455555555555  2457999999


Q ss_pred             EeecccccCccccccCchh
Q psy14589        619 YYVCHELLGHVPLFADPSF  637 (655)
Q Consensus       619 ~~~~~~~~~~~~~~~~~~~  637 (655)
                      +|  |++|++|-|+|+++-
T Consensus       418 ~y--~pyt~svevl~~~~~  434 (457)
T TIGR01269       418 RF--DPITETVEVLDRFSK  434 (457)
T ss_pred             ee--cCccceEEEeCCHHH
Confidence            99  999999999999863

This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.

>PF00351 Biopterin_H: Biopterin-dependent aromatic amino acid hydroxylase; InterPro: IPR019774 Phenylalanine, tyrosine and tryptophan hydroxylases constitute a family of tetrahydrobiopterin-dependent aromatic amino acid hydroxylases, all of which are rate-limiting catalysts for important metabolic pathways []

Probab=100.00  E-value=4e-87  Score=691.81  Aligned_cols=271  Identities=53%  Similarity=0.850  Sum_probs=220.1

Q ss_pred             cCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-------------------------
Q psy14589        345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-------------------------  399 (655)
Q Consensus       345 pWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-------------------------  399 (655)
                      |||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|++||+||+                         
T Consensus         1 pwfp~~i~dld~~~~~~~~~~~~l~~dHPgf~D~~Yr~RR~~ia~~A~~~k~g~pip~v~YT~eE~~tW~~v~~rl~~l~   80 (332)
T PF00351_consen    1 PWFPRKISDLDKCAHLVLKYGPELDADHPGFKDPEYRKRRKEIADIAFNYKHGDPIPRVEYTEEEHATWRTVYRRLMKLY   80 (332)
T ss_dssp             E---SBGGGGGGTTTCEECSSTSCSTTSTTTTSHHHHHHHHHHHHHHHH--TTSTTSGGG--HHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHhhhccccccCCCccccchhhcccHHHHHHHHHHHHHHhccccCCCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999998                         


Q ss_pred             ---cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCC
Q psy14589        400 ---LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYT  476 (655)
Q Consensus       400 ---Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~  476 (655)
                         ||+||++|+++|++.|||++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||||+++|+||
T Consensus        81 ~~~AC~eyl~~~~~L~~~~G~~~d~IPqL~dvs~~L~~~TGw~l~pV~Gll~~rdF~~~LA~RvFp~TqyIRh~~~p~Yt  160 (332)
T PF00351_consen   81 PTHACREYLEGFPLLEKYCGYPEDRIPQLEDVSEFLKERTGWQLRPVAGLLSARDFFAGLAFRVFPCTQYIRHHSEPDYT  160 (332)
T ss_dssp             HHHB-HHHHHHHHHHHHHHT-BTTB---HHHHHHHHHHHHS-EEEEESSEB-HHHHHHHHTTTEEEEESS---TTSTTS-
T ss_pred             hhhhhHHHHHHHHHHHhccCCCccCCCCHHHHhHHHHhhcCeEEEEeCcccCHHHHHHHHhcCcCceEeeecCCCCCCCC
Confidence               99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHH
Q psy14589        477 PEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDF  555 (655)
Q Consensus       477 ~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~  555 (655)
                      ||||||||++||+|||+||+||+|+|++|+++||+++++|.+|+||||||||||||+++     +++|+ |||||||.+|
T Consensus       161 pEPDi~HEl~GHvPmLadp~FA~f~q~~G~asl~asde~i~~LarlyWfTVEFGL~~e~-----g~lkaYGAGlLSS~gE  235 (332)
T PF00351_consen  161 PEPDIFHELFGHVPMLADPSFADFSQEIGLASLGASDEDIEKLARLYWFTVEFGLCREN-----GELKAYGAGLLSSYGE  235 (332)
T ss_dssp             SS--HHHHHHHTHHHHTSHHHHHHHHHHHHHHTT--HHHHHHHHHHHHTTTTT-EEEET-----TEEEE--HHHHT-HHH
T ss_pred             CCCccHhHHhccchhhhcHHHHHHHHHHHHHHhhhhHHHHHHHHhheeeeeEEEEEecC-----CceEEecccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999     99999 9999999999


Q ss_pred             HHhhhc-----ccccc-----cccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceEEEeecccc
Q psy14589        556 LAGLAF-----RVFHS-----TQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHEL  625 (655)
Q Consensus       556 ~~~l~~-----~~f~~-----~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~~~~~~~~~  625 (655)
                      ++|..+     +.|-.     +.|..+..|+.|.. -|.|.|+.-.+            .+|. ..++.||.++|  |++
T Consensus       236 l~~als~~~~~~pfdp~~~~~~~y~i~~~Qp~YFv-~eSfe~~~~kl------------r~fa-~~i~rpf~~~y--dp~  299 (332)
T PF00351_consen  236 LEHALSDKPEIRPFDPERVARTPYDITTYQPVYFV-IESFEDAKEKL------------REFA-ATIKRPFSVRY--DPY  299 (332)
T ss_dssp             HHHHTSSSSEEEE--HHHHCTS---SSSS-SEEEE-ESSHHHHHHHH------------HHHH-HTS--SSEEEE--ETT
T ss_pred             cccccCCCCeeeccCHHHHhCCCCCCCcccceEEE-ECCHHHHHHHH------------HHHH-HhCCCCCcccc--CCC
Confidence            999964     34533     34555555666665 35555553322            2232 35689999999  999


Q ss_pred             cCccccccCch
Q psy14589        626 LGHVPLFADPS  636 (655)
Q Consensus       626 ~~~~~~~~~~~  636 (655)
                      |++|-|+|++.
T Consensus       300 t~svevl~~~~  310 (332)
T PF00351_consen  300 TQSVEVLDSPQ  310 (332)
T ss_dssp             TTEEEEE-SHH
T ss_pred             cceEEecCCHH
Confidence            99999999985

The proteins are structurally and functionally related, each containing iron, and catalysing ring hydroxylation of aromatic amino acids, using tetra-hydrobiopterin (BH4) as a substrate. All are regulated by phosphorylation at serines in their N-termini. It has been suggested that the proteins each contain a conserved C-terminal catalytic (C) domain and an unrelated N-terminal regulatory (R) domain. It is possible that the R domains arose from genes that were recruited from different sources to combine with the common gene for the catalytic core. Thus, by combining with the same C domain, the proteins acquired the unique regulatory properties of the separate R domains. A variety of enzymes belong to this family that includes, phenylalanine-4-hydroxylase from Chromobacterium violaceum where it is copper-dependent; it is iron-dependent in Pseudomonas aeruginosa, phenylalanine-4-hydroxylase catalyzes the conversion of phenylalanine to tyrosine. In humans, deficiencies are the cause of phenylketonuria, the most common inborn error of amino acid metabolism [], tryptophan 5-hydroxylase catalyzes the rate-limiting step in serotonin biosynthesis: the conversion of tryptophan to 3-hydroxy-anthranilate and tyrosine 3-hydroxylase catalyzes the rate limiting step in catecholamine biosynthesis: the conversion of tyrosine to 3,4-dihydroxy-L-phenylalanine.; GO: 0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen, 0055114 oxidation-reduction process; PDB: 1PHZ_A 2PHM_A 2V28_A 2V27_A 1PAH_A 1DMW_A 1TG2_A 1KW0_A 1MMT_A 1TDW_A ....

>cd03347 eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

Probab=100.00  E-value=1.8e-84  Score=665.65  Aligned_cols=270  Identities=61%  Similarity=0.960  Sum_probs=246.7

Q ss_pred             cCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-------------------------
Q psy14589        345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-------------------------  399 (655)
Q Consensus       345 pWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-------------------------  399 (655)
                      |||||+|+|||+|+|++|++|++|++|||||+|++||+||++||++|.+||+|++                         
T Consensus         1 pwfp~~~~dld~~~~~~~~~~~~l~~dhpgf~d~~yr~rr~~~a~~a~~y~~g~~ip~v~YT~eE~~~W~~l~~r~~~l~   80 (306)
T cd03347           1 PWFPRTIQDLDRFANQILSYGAELDADHPGFKDPVYRARRKEFADIAYNYKHGQPIPRVEYTEEEKKTWGTVFRELKSLY   80 (306)
T ss_pred             CCCCCcHHHHHHHhhHhhhcCCccccCCCCCCcHHHHHHHHHHHHHHHhccCCCCCCcCcCCHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999999999999999999987                         


Q ss_pred             ---cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCC
Q psy14589        400 ---LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYT  476 (655)
Q Consensus       400 ---Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~  476 (655)
                         ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||||+++|+||
T Consensus        81 ~~~Ac~eyl~~l~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~Yt  160 (306)
T cd03347          81 PTHACYEYNHVFPLLEKNCGFSEDNIPQLEDVSNFLQTCTGFRLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYT  160 (306)
T ss_pred             ccccCHHHHHHHHHHHHhcCCCcCCCCCHHHHHHHHHhccCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCC
Confidence               99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHH
Q psy14589        477 PEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDF  555 (655)
Q Consensus       477 ~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~  555 (655)
                      ||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ |||||||.+|
T Consensus       161 pEPDifHEl~GHvPlLadp~FA~f~q~~G~~~l~a~~~~i~~LarlYWfTVEFGLi~e~-----g~lkaYGAGlLSS~GE  235 (306)
T cd03347         161 PEPDICHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYIEKLATVYWFTVEFGLCKQG-----GSIKAYGAGLLSSFGE  235 (306)
T ss_pred             CCCchHHHHhccchhhcCHHHHHHHHHHHHHhcCCCHHHHHHHhhheeeeeccccccCC-----CceeEeecchhcCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999     99999 9999999999


Q ss_pred             HHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeecccccCc
Q psy14589        556 LAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHELLGH  628 (655)
Q Consensus       556 ~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~~~~~  628 (655)
                      ++|+.+     +.|-+..-+|+++.++-.+      +     -++.-++|.+..+.++  ...++.||.++|  |++|++
T Consensus       236 ~~~als~~p~~~pfd~~~~~~t~Y~I~~~Q------p-----~YFv~~Sfe~l~~~l~~f~~~~~rpf~~~y--~~~t~~  302 (306)
T cd03347         236 LQYCLSDKPELLPFEPEKTAVTKYPITEFQ------P-----LYYVAESFEDAKEKLRNFAATIPRPFSVRY--NPYTQR  302 (306)
T ss_pred             HHHHcCCCCccCCCCHHHHhCCCCCCCCcC------C-----ceEEeCCHHHHHHHHHHHHHhCCCCcccee--cCccce
Confidence            999843     4454444555555543333      1     2455566666666665  355799999999  999999


Q ss_pred             cccc
Q psy14589        629 VPLF  632 (655)
Q Consensus       629 ~~~~  632 (655)
                      |-|+
T Consensus       303 v~~~  306 (306)
T cd03347         303 IEVL  306 (306)
T ss_pred             EeeC
Confidence            9874

PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria.

>cd03345 eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH)

Probab=100.00  E-value=1.1e-82  Score=650.36  Aligned_cols=262  Identities=50%  Similarity=0.820  Sum_probs=237.0

Q ss_pred             CcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC--------------------------
Q psy14589        346 WFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL--------------------------  399 (655)
Q Consensus       346 WfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~--------------------------  399 (655)
                      ||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++                          
T Consensus         1 wfp~~~~dld~~~~~~~~~~~~l~~dhpgf~d~~yr~rr~~~a~~a~~y~~g~~ip~v~YT~eE~~~W~~l~~r~~~l~~   80 (298)
T cd03345           1 WFPRHISELDKCHHLVTKYEPDLDLDHPGFSDKVYRERRKLIAEIAFQYKHGDPIPRVEYTAEEIATWKEVYKTLKDLHA   80 (298)
T ss_pred             CCCCCHHHHHHHhhhhhhcCCcccCCCCCCCCHHHHHHHHHHHHHHhcCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999987                          


Q ss_pred             --cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCCC
Q psy14589        400 --LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTP  477 (655)
Q Consensus       400 --Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~~  477 (655)
                        ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||||+++|+|||
T Consensus        81 ~~Ac~eyl~gl~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~Ytp  160 (298)
T cd03345          81 THACKEYLDAFQLLEKECGYSEDRIPQLEDVSEFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSP  160 (298)
T ss_pred             hhhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhccCCEEEecCccCCHHHHHHHHhcCcccccceecCCcccCCCC
Confidence              999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHHH
Q psy14589        478 EPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDFL  556 (655)
Q Consensus       478 epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~~  556 (655)
                      |||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ |||||||.+|+
T Consensus       161 EPDi~HEl~GHvPlLadp~FA~f~q~~G~~~l~a~~~~i~~LarlYWfTVEFGLi~e~-----g~lkaYGAGlLSS~gEl  235 (298)
T cd03345         161 EPDCCHELLGHVPMLADPTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKEN-----GELKAYGAGLLSSYGEL  235 (298)
T ss_pred             CCchHHHHhccchhhCCHHHHHHHHHHHHHhcCCCHHHHHHHhHhhhhhhhcccccCC-----CceeEeechhhcCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999     99999 99999999999


Q ss_pred             Hhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeecccc
Q psy14589        557 AGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHEL  625 (655)
Q Consensus       557 ~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~~  625 (655)
                      +|..+     +.|-+..-+|+++.++-.+      +     -++.-++|.+..+.++  ...++.||.++|  |++
T Consensus       236 ~~als~~p~~~pfd~~~~~~t~Y~i~~~Q------p-----~YFv~~Sfe~l~~~l~~f~~~~~rpf~~~y--~~~  298 (298)
T cd03345         236 LHALSDEPEHRPFDPAATAVQPYQDQTYQ------P-----IYFVSESFSDAKDKLRNYASTMKRPFSVRY--DPY  298 (298)
T ss_pred             HHHCCCCCccCCCCHHHHhcCCCCCCCcC------C-----ceEEeCCHHHHHHHHHHHHHhcCCCCcccC--CCC
Confidence            99854     3444444445444433222      1     2444556666666655  345689999999  764

TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline.

>cd03346 eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH)

Probab=100.00  E-value=1.3e-80  Score=633.16  Aligned_cols=227  Identities=61%  Similarity=0.989  Sum_probs=216.2

Q ss_pred             cCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-------------------------
Q psy14589        345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-------------------------  399 (655)
Q Consensus       345 pWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-------------------------  399 (655)
                      |||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++                         
T Consensus         1 ~wfp~~~~~ld~~~~~~~~~~~~l~~dhpg~~d~~yr~rr~~~a~~a~~y~~g~~ip~i~YT~~E~~~W~~l~~r~~~l~   80 (287)
T cd03346           1 PWFPKKISDLDKCANRVLMYGSELDADHPGFKDNVYRKRRKYFADVAMNYKHGDPIPRVEYTEEEIKTWGTVYRELNRLY   80 (287)
T ss_pred             CCCCCcHHHHHHHhhhhhccCCccccCCCCCCChHHHHHHHHHHHHHhhccCCCCCCccccCHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999999999999999999999999999999999999987                         


Q ss_pred             ---cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCC
Q psy14589        400 ---LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYT  476 (655)
Q Consensus       400 ---Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~  476 (655)
                         ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++|+||
T Consensus        81 ~~~Ac~eyl~gl~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~r~Fp~t~~IR~~~~~~Yt  160 (287)
T cd03346          81 PTHACREYLKNLPLLEKHCGYREDNIPQLEDVSRFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPFYT  160 (287)
T ss_pred             hccccHHHHHHHHHHHhccCCCcCCCCCHHHHHHHHHhccCCEEEecCCcCCHHHHHHHHhcCcccceeeecCccccCCC
Confidence               99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHH
Q psy14589        477 PEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDF  555 (655)
Q Consensus       477 ~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~  555 (655)
                      ||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ |||||||.+|
T Consensus       161 pEPDifHEl~GHvPlLadp~FA~f~q~~G~~~l~a~~~~i~~LarlYWfTVEFGLi~e~-----~~lkaYGAGiLSS~gE  235 (287)
T cd03346         161 PEPDTCHELLGHVPLLADPSFAQFSQEIGLASLGASDEDIQKLATCYFFTVEFGLCKQD-----GQLKVYGAGLLSSIGE  235 (287)
T ss_pred             CCCchHHHHhccchhhcCHHHHHHHHHHHHHhcCCCHHHHHHHhHhhhhhcccccccCC-----CceeEeccchhcCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999     99999 9999999999


Q ss_pred             HHhhh-----cccccccccccCCCCC
Q psy14589        556 LAGLA-----FRVFHSTQYIRHPSKP  576 (655)
Q Consensus       556 ~~~l~-----~~~f~~~~~ir~~~~~  576 (655)
                      ++|..     .+.|-+..-+|+++.+
T Consensus       236 ~~~als~~~~~~pfd~~~~~~t~Y~i  261 (287)
T cd03346         236 LKHALSGEAKVKPFDPKVTCKQECLI  261 (287)
T ss_pred             HHHHccCCCccCCCCHHHHhCCCCCC
Confidence            99985     2455444444544443

TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter.

>PRK11913 phhA phenylalanine 4-monooxygenase; Reviewed

Probab=100.00  E-value=2.9e-62  Score=499.20  Aligned_cols=202  Identities=35%  Similarity=0.469  Sum_probs=184.0

Q ss_pred             CHHHHHHHHHHHHHHhccCCCCC--------------------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHH
Q psy14589        377 DPVYRARRKYFADLAFNYKHSIL--------------------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISK  430 (655)
Q Consensus       377 D~~y~~rR~~ia~ia~~~k~g~~--------------------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~  430 (655)
                      +++||+||+.+++++.+|+.+++                          ||++|++|+++|    |++.|+||||+|||+
T Consensus         1 ~~~~~~~r~~~~~~a~~y~~~q~~~~YT~~e~~~W~~l~~r~~~~~~~~Ac~~yl~gl~~L----~l~~d~IPql~~in~   76 (275)
T PRK11913          1 DAAYRARRDAGMEKAADYTADQPWIDYTAEEHAIWQTLYERQLALLPGRACDEFLEGLEAL----GLPKDRIPQLDEINR   76 (275)
T ss_pred             ChhHhhhhhhHHHHHHhccCCCCcccCCHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHc----CCCCCCCCCHHHHHH
Confidence            56999999999999999999987                          999999999999    999999999999999


Q ss_pred             hhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCC
Q psy14589        431 FLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLG  510 (655)
Q Consensus       431 ~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~  510 (655)
                      +|+++|||+++||+||||+++||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+++++
T Consensus        77 ~L~~~TGw~~~pV~Glip~~~Ff~~LA~r~Fp~t~~IR~~~~~~YtpEPDifHevfGHvPmL~~p~FAdf~q~~G~~~l~  156 (275)
T PRK11913         77 VLQAATGWQVVPVPGLIPFDVFFELLANRRFPVATFIRRPEELDYLQEPDIFHDVFGHVPLLTNPVFADFMQAYGKLGLR  156 (275)
T ss_pred             HHHhhcCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCCCCCchHHHHhccchhhcCHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChHHHH-HHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHHHHhhh-c-----ccccccccccCCC-----CCC
Q psy14589        511 APDEYVE-RLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDFLAGLA-F-----RVFHSTQYIRHPS-----KPL  577 (655)
Q Consensus       511 ~~~~~i~-~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~-~-----~~f~~~~~ir~~~-----~~~  577 (655)
                      ++++++. +|+||||||||||||+++     +++|+ |||||||.+|++|.. +     +.|-+..-+|+++     |+.
T Consensus       157 a~~~~~~~~LarlyWfTVEFGLi~e~-----~~lk~YGAGiLSS~gE~~~al~s~~p~~~pfd~~~v~~t~Y~i~~~Qp~  231 (275)
T PRK11913        157 ASKEGRLEFLARLYWFTVEFGLIRTP-----GGLRIYGAGILSSPGETLYALESDSPNRRPFDLERVMRTPYRIDIFQPT  231 (275)
T ss_pred             cChhhHHHHHhhheeeeecccccccC-----CceeEeechhhcCHHHHHHHhcCCCCeeecCCHHHHhCCCCCCCCcCCc
Confidence            9988877 999999999999999999     99999 999999999999997 2     3454444455554     444


Q ss_pred             CCCCcchhhhh
Q psy14589        578 YTPEPDVCHEL  588 (655)
Q Consensus       578 y~~~pd~~hd~  588 (655)
                      |.. -|.|.++
T Consensus       232 YFv-i~sf~~L  241 (275)
T PRK11913        232 YFV-IDSFEQL  241 (275)
T ss_pred             eEE-eCCHHHH
Confidence            554 2444444

>cd03348 pro_PheOH Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH)

Probab=100.00  E-value=3.2e-59  Score=465.19  Aligned_cols=196  Identities=29%  Similarity=0.379  Sum_probs=175.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChH
Q psy14589        371 DHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSR  450 (655)
Q Consensus       371 dhpgf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~  450 (655)
                      ....+|++|-.-=|....++...+  .+.||++|++|+++|    |++.|+||||+|||++|+++|||+++||+||||++
T Consensus         7 ~~~~YT~~e~~~W~~l~~r~~~~~--~~~Ac~~yl~gl~~L----~l~~d~IPql~~vn~~L~~~TGw~~~pV~Glip~~   80 (228)
T cd03348           7 GQIDYTPEEHAVWRTLYERQAKLL--PGRACDAFLEGLEKL----GLPTDRIPDFADVSERLKAATGWTVVAVPGLIPDD   80 (228)
T ss_pred             CcccCCHHHHHHHHHHHHHHHHHh--hcccCHHHHHHHHHc----CCCCCCCCCHHHHHHHHHhccCCEEEecCCcCCHH
Confidence            344677777776666777766665  346999999999999    89999999999999999999999999999999999


Q ss_pred             HHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCCh-HHHHHHHhhhhhhhhh
Q psy14589        451 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPD-EYVERLATSNNFMIVP  529 (655)
Q Consensus       451 ~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~-~~i~~l~~l~w~tve~  529 (655)
                      +||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|++++++++ +++.+|+|||||||||
T Consensus        81 ~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGHvPmL~~p~fAdf~q~~G~~~l~a~~~~~~~~LarlyWfTVEF  160 (228)
T cd03348          81 EFFEHLANRRFPVTNFIRRPEELDYLQEPDIFHDIFGHVPMLTNPVFADFMQAYGKGGLKATGLEDRALLARLYWYTVEF  160 (228)
T ss_pred             HHHHHHhcCCCceeeeecCccccCCCCCcHHHHHHhcccHhhcCHHHHHHHHHHHHHHhCCCCHHHHHHHhHhhhhhccc
Confidence            999999999999999999999999999999999999999999999999999999999999999 9999999999999999


Q ss_pred             hhccCCCCCCCCeEee-cccccCCHHHHHhhhcc------cccccccccCCCCCC
Q psy14589        530 RLASLSPDSTGFSLRP-VAGLLSSRDFLAGLAFR------VFHSTQYIRHPSKPL  577 (655)
Q Consensus       530 gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~~------~f~~~~~ir~~~~~~  577 (655)
                      |||+++     +++|+ |||||||.+|++|..+.      .|-+..-+|+++.++
T Consensus       161 GLi~e~-----~~lk~YGAGiLSS~gE~~~al~~~~~~~~~fd~~~v~~t~Y~i~  210 (228)
T cd03348         161 GLIQEP-----GGLRIYGAGILSSPGETLYALESPDPNRIPFDLERVMRTPYRID  210 (228)
T ss_pred             cccccC-----CceeEeccchhcCHHHHHHHcCCCCCcccCCCHHHHhCCCCCCC
Confidence            999999     99999 99999999999998542      444444455555433

PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor.

>cd00361 arom_aa_hydroxylase Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

Probab=100.00  E-value=4e-59  Score=463.16  Aligned_cols=195  Identities=49%  Similarity=0.661  Sum_probs=173.0

Q ss_pred             CCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHH
Q psy14589        374 GFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFL  453 (655)
Q Consensus       374 gf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~  453 (655)
                      .++++|-.-=|....++...+  .+.||++|++|+++|    ++++|+||||+|||++|+++|||+++||+||||+++||
T Consensus         4 ~YT~~e~~~W~~l~~r~~~~~--~~~Ac~~yl~gl~~l----~l~~d~IPql~~in~~L~~~TGw~~~pV~gli~~~~Ff   77 (221)
T cd00361           4 DYTEEEHATWRTLYRRLKKLL--PTHACREYLEGLELL----GLPEDRIPQLEDVSEFLKALTGWTLVPVAGLISPRDFF   77 (221)
T ss_pred             cCCHHHHHHHHHHHHHHHHHh--ccccCHHHHHHHHHc----CCCCCCCCCHHHHHHHHHhhcCCEEEecCCcCCHHHHH
Confidence            355555555555666665554  456999999999999    89999999999999999999999999999999999999


Q ss_pred             HhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCCh-HHHHHHHhhhhhhhhhhhc
Q psy14589        454 AGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPD-EYVERLATSNNFMIVPRLA  532 (655)
Q Consensus       454 ~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~-~~i~~l~~l~w~tve~gl~  532 (655)
                      ++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|++++++++ +++.+|+||||||||||||
T Consensus        78 ~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~~GH~P~L~~p~fAdf~q~~G~~~l~a~~~~~~~~LarlyWfTVEFGLi  157 (221)
T cd00361          78 ALLAFRVFPVTQYIRHPEEPDYTPEPDIFHELFGHVPLLADPSFADFSQEYGLASLGASDLEEIEKLARLYWFTVEFGLI  157 (221)
T ss_pred             HHHhcCCCceeeeecCcCCCCCCCCChhHHHHhccchhhcCHHHHHHHHHHHHHHhCcCCHHHHHHHHHhhhhhcccccc
Confidence            999999999999999999999999999999999999999999999999999999999999 9999999999999999999


Q ss_pred             cCCCCCCCCeEee-cccccCCHHHHHhhhc-----ccccccccccCCCCCCCC
Q psy14589        533 SLSPDSTGFSLRP-VAGLLSSRDFLAGLAF-----RVFHSTQYIRHPSKPLYT  579 (655)
Q Consensus       533 ~~~~~~tg~~~~~-g~Gllss~~~~~~l~~-----~~f~~~~~ir~~~~~~y~  579 (655)
                      +++     +++|+ |||||||.+|++|..+     +.|-+..-+|+++.++-.
T Consensus       158 ~e~-----~~lk~YGAGiLSS~gE~~~~l~~~~~~~~fd~~~v~~t~Y~i~~~  205 (221)
T cd00361         158 KED-----GELKAYGAGLLSSYGELQHALSDKPKRIPFDPERVARTPYDITSF  205 (221)
T ss_pred             cCC-----CceeEeechhhcCHHHHHHHccCCCccCCCCHHHHhCCCCCCCCc
Confidence            999     99999 9999999999999863     245554555655554433

PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers.

>TIGR01267 Phe4hydrox_mono phenylalanine-4-hydroxylase, monomeric form

Probab=100.00  E-value=1.4e-58  Score=464.59  Aligned_cols=196  Identities=27%  Similarity=0.359  Sum_probs=175.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChH
Q psy14589        371 DHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSR  450 (655)
Q Consensus       371 dhpgf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~  450 (655)
                      ....+|++|-.-=|....++...+  .+.||++|++|+++|    |++.|+||||+|||++|+++|||+++||+||||++
T Consensus         7 ~~~~YT~~e~~~W~~l~~r~~~~~--~~~Ac~~yl~gl~~l----gl~~d~IPql~~vn~~L~~~TGw~~~pV~Gli~~~   80 (248)
T TIGR01267         7 GFDHYSEEEHAVWNTLITRQLKLI--EGRACQEYLDGIEQL----GLPHDRIPDFDEINRKLQATTGWRIAAVPGLIPFQ   80 (248)
T ss_pred             CcccCCHHHHHHHHHHHHHHHHHh--hccccHHHHHHHHHc----CCCCCCCCCHHHHHHHHHhccCCEEEecCCcCCHH
Confidence            445677877776667777766664  456999999999999    99999999999999999999999999999999999


Q ss_pred             HHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChH-HHHHHHhhhhhhhhh
Q psy14589        451 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE-YVERLATSNNFMIVP  529 (655)
Q Consensus       451 ~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~-~i~~l~~l~w~tve~  529 (655)
                      +||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+++++++++ ++.+|+|||||||||
T Consensus        81 ~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGH~P~L~~P~FA~f~q~~G~~~l~a~~~~~~~~LarlyWfTVEF  160 (248)
T TIGR01267        81 TFFEHLANRRFPVTTWLRTPEELDYLQEPDIFHDIFGHVPLLTNPVFADFTHTYGKLGLKASALGRVEMLARLYWYTIEF  160 (248)
T ss_pred             HHHHHHhcCccceeeeecCccccCCCCCchHHHHHhccccccCChHHHHHHHHHHHHHhCCCchHHHHHHhhhheeeeec
Confidence            9999999999999999999999999999999999999999999999999999999999999887 578999999999999


Q ss_pred             hhccCCCCCCCCeEee-cccccCCHHHHHhhhc------ccccccccccCCCCCC
Q psy14589        530 RLASLSPDSTGFSLRP-VAGLLSSRDFLAGLAF------RVFHSTQYIRHPSKPL  577 (655)
Q Consensus       530 gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~------~~f~~~~~ir~~~~~~  577 (655)
                      |||+++     +++|+ |||||||.+|++|+.+      +.|-+..-+|+++.++
T Consensus       161 GLi~e~-----~~lr~YGAGiLSS~gE~~~al~s~~p~~~pfd~~~v~~t~Y~i~  210 (248)
T TIGR01267       161 GLVETD-----QGKRIYGAGILSSPKETVYSLESDEPLHVAFDLLEAMRTPYRID  210 (248)
T ss_pred             cccccC-----CceeEecchhhcCHHHHHHHhcCCCCcccCCCHHHHhCCCCCCC
Confidence            999999     99999 9999999999999873      2444444455555433

This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase.

>PRK14055 aromatic amino acid hydroxylase; Provisional

Probab=100.00  E-value=8.5e-54  Score=439.33  Aligned_cols=199  Identities=23%  Similarity=0.269  Sum_probs=165.3

Q ss_pred             CCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCCC
Q psy14589        398 ILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTP  477 (655)
Q Consensus       398 ~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~~  477 (655)
                      ..||++|++|++.|    |+..| +|+++|||++|++.|||+++||+||||+++||++||+|+|||||||||+++|+|||
T Consensus       120 ~~Ac~eYLeGl~~L----~L~~D-~~~L~eVn~~L~~~TGW~v~pVpGLIp~~~Ff~~LA~R~FPvttyIR~~ee~dYtp  194 (362)
T PRK14055        120 SYCPRFFLDYLEAF----GLLSD-FLDHQAVIKFFELETHFSYYPVSGFVAPHQYLSLLQDRYFPIASVMRTLDKDNFSL  194 (362)
T ss_pred             hhccHHHHHHHHhc----CCCcc-cCChHHHHHHHHhccCCEEEecCCcCCHHHHHHHHhcCeeceeeeeccccccCCCC
Confidence            46999999999999    99988 88899999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhhhcCCCCccCChhHHHHHHHHhhhcCCC---------ChHHHH-------HHHhhhhhhhhhhhccCCCCCCCC
Q psy14589        478 EPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA---------PDEYVE-------RLATSNNFMIVPRLASLSPDSTGF  541 (655)
Q Consensus       478 epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~---------~~~~i~-------~l~~l~w~tve~gl~~~~~~~tg~  541 (655)
                      |||||||++||+|||+||+||+|+|++|++++++         +++++.       .|+|+||||||||||+++     +
T Consensus       195 EPDifHEvfGHvPmLanP~FAdF~q~~G~~glkA~e~~~sL~~~ee~ie~~~~~l~~LaRLYWFTVEFGLI~e~-----g  269 (362)
T PRK14055        195 TPDLIHDLLGHVPWLLHPSFSEFFINMGRLFTKVIEKVQALPSKKQRIQTLQSNLIAIVRCFWFTVESGLIENH-----E  269 (362)
T ss_pred             CchHHHHhhccchhhcCHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHhhhhHHHHhhheeeeeeeeeeeccC-----C
Confidence            9999999999999999999999999999985554         445553       599999999999999999     9


Q ss_pred             eEee-cccccCCHHHHHhhhc-----ccccccccccCCCC-----CCCCCCcchhhhhcCCcccccCchHHHHHHHHhhc
Q psy14589        542 SLRP-VAGLLSSRDFLAGLAF-----RVFHSTQYIRHPSK-----PLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLA  610 (655)
Q Consensus       542 ~~~~-g~Gllss~~~~~~l~~-----~~f~~~~~ir~~~~-----~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~  610 (655)
                      ++|+ |||||||.+|++|..+     +.|-+..-+|+++.     +.|.. -|.|.+++-=+.     ....++.+..+.
T Consensus       270 ~lKiYGAGILSS~GEl~~aL~~~~~r~pFD~~~v~rTpY~Id~~Qp~YFV-ieSfe~L~e~~~-----~i~~~v~~~~~~  343 (362)
T PRK14055        270 GRKAYGAVLISSPQELGHAFIDNVRVLPLELDQIIRLPFNTSTPQETLFS-IRHFDELVELTS-----KLEWMLDQGLLE  343 (362)
T ss_pred             ceeEecceeccChHHHHHHhcCCCCcCCCCHHHHhcCCCCCCCCCCceEE-eCCHHHHHHHHH-----HHHHHHHHhhhc
Confidence            9999 9999999999999853     34555455555554     44544 255555543222     233344444455


Q ss_pred             cc
Q psy14589        611 SL  612 (655)
Q Consensus       611 ~~  612 (655)
                      |+
T Consensus       344 gl  345 (362)
T PRK14055        344 SI  345 (362)
T ss_pred             CC
Confidence            55

>PRK14056 phenylalanine 4-monooxygenase; Provisional

Probab=100.00  E-value=1.1e-50  Score=440.19  Aligned_cols=197  Identities=21%  Similarity=0.233  Sum_probs=167.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCC
Q psy14589        369 DADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLS  448 (655)
Q Consensus       369 ~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~  448 (655)
                      +++...||+.|-.-=|....+....+  .+.||++|++|++++    |++.|+||||++||++|++ |||+++||+||||
T Consensus        15 ~Q~y~~YT~~ehavWr~v~~r~~~~l--~~~Ac~~YL~GL~~l----gl~~d~IPql~emN~~L~~-tGW~~vpV~GlIp   87 (578)
T PRK14056         15 PQHYDQYTPVDHAVWRYVMRQNHSFL--KDVAHPAYLNGLQST----GINIERIPKVEEMNECLAE-IGWGAVAVDGFIP   87 (578)
T ss_pred             CCChhhCCHHHHHHHHHHHHHHHHHh--ccccCHHHHHHHHHc----CCCccCCCCHHHHHHHHHH-cCCEEEeccccCC
Confidence            44566777777665555555554443  456999999999877    9999999999999999999 9999999999999


Q ss_pred             hHHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhc--------------------
Q psy14589        449 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLAS--------------------  508 (655)
Q Consensus       449 ~~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~--------------------  508 (655)
                      +++||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+.+                    
T Consensus        88 ~~~Ffe~LA~rvFpit~~IR~~e~i~YtPEPDIfHE~~GH~P~LadP~fAdf~q~~G~iG~kAi~~~~d~~~y~Air~ls  167 (578)
T PRK14056         88 PVAFFEFQGHGVLPIATDIRKVENIEYTPAPDIIHEAAGHAPILADPTYAEYLRRFGEIGAKAISSKEDHDVFEAVRTLS  167 (578)
T ss_pred             HHHHHHHHhcCeeceeeeeccccccCCCCCCchhhhhhccchhhcCHHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhh
Confidence            999999999999999999999999999999999999999999999999999999998864                    


Q ss_pred             -----CCCChHHH--------------------HHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHHHHhhhc-
Q psy14589        509 -----LGAPDEYV--------------------ERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDFLAGLAF-  561 (655)
Q Consensus       509 -----l~~~~~~i--------------------~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~-  561 (655)
                           +|+++++|                    .+++||||||||||||+++     +++|+ |||||||.+|++|+.. 
T Consensus       168 i~KEs~~as~e~i~~AE~~~~~~~~~~~~~Se~~~LaRLyWfTVEFGLI~e~-----~~lKiYGAGLLSS~GE~~~~lsd  242 (578)
T PRK14056        168 IVKESPTSTPEEVAAAENRVIEKQNLVSGLSEAEQISRLFWWTVEYGLIGTL-----DNPKIYGAGLLSSVGESKHCLTD  242 (578)
T ss_pred             hcccccCCchHhhhhhhhhhhhhhccccchHHHHHHhheeeeeeeeeeeccC-----CceeEecceeecCHHHHHHhccC
Confidence                 44456655                    7899999999999999999     99999 9999999999999964 


Q ss_pred             ----ccccccccccCCCCCC
Q psy14589        562 ----RVFHSTQYIRHPSKPL  577 (655)
Q Consensus       562 ----~~f~~~~~ir~~~~~~  577 (655)
                          +.|-+...+|+++.++
T Consensus       243 ~~~k~pfd~~~v~~t~Y~It  262 (578)
T PRK14056        243 AVEKVPFSIEACTSTTYDIT  262 (578)
T ss_pred             CCccCCCCHHHHhCCCCCCC
Confidence                2343333445544433

>COG3186 Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.3e-48  Score=383.30  Aligned_cols=190  Identities=27%  Similarity=0.333  Sum_probs=169.6

Q ss_pred             HHHHHHHHHHhccCCCC-CcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCc
Q psy14589        382 ARRKYFADLAFNYKHSI-LLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRV  460 (655)
Q Consensus       382 ~rR~~ia~ia~~~k~g~-~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~  460 (655)
                      ++.-|..-+.+..|-=. .||++|++|+++|    |++.++|||+++||++|+++|||+++|||||||+..||++||+|+
T Consensus        46 eh~vW~tL~~rq~~l~~~rac~~fLdgle~l----gL~~~~ipd~~~in~~l~~~Tgw~v~~Vpglvp~~~ff~lLanrr  121 (291)
T COG3186          46 EHAVWRTLIDRQTKLLKGRACQEFLDGLEAL----GLPLSRIPDFDEINRVLQRETGWQVVAVPGLVPFDVFFDLLANRR  121 (291)
T ss_pred             HHHHHHHHHHHHHHHHhccchHHHHHHHHHc----CCCcccCCCHHHHHHHHHHhcCcEEEecCccCChHHHHHHHhhcc
Confidence            44455555555444333 4999999999999    999999999999999999999999999999999999999999999


Q ss_pred             cceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChH-HHHHHHhhhhhhhhhhhccCCCCCC
Q psy14589        461 FHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE-YVERLATSNNFMIVPRLASLSPDST  539 (655)
Q Consensus       461 f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~-~i~~l~~l~w~tve~gl~~~~~~~t  539 (655)
                      ||+++|||++++.||+.|||+|||++||||||+||.||+|+|.+|..++++.+. +...++|+||||||||||++.    
T Consensus       122 FPva~~mRt~~eldylqePD~fHdvfGHvP~Lt~P~FAdf~~~yG~lg~ka~~~~~~~~laRlyW~TvEfGLv~~~----  197 (291)
T COG3186         122 FPVATFMRTPDELDYLQEPDIFHDVFGHVPMLTHPVFADFMQAYGKLGLKAIELGRLLMLARLYWYTVEFGLVETP----  197 (291)
T ss_pred             CcHHHHhcCHhhcccccCccHHHHHhccCchhcCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhhceeecc----
Confidence            999999999999999999999999999999999999999999999999998664 455999999999999999999    


Q ss_pred             CCeEee-cccccCCHHHHHhhhc------ccccccccccCCCCCCCCC
Q psy14589        540 GFSLRP-VAGLLSSRDFLAGLAF------RVFHSTQYIRHPSKPLYTP  580 (655)
Q Consensus       540 g~~~~~-g~Gllss~~~~~~l~~------~~f~~~~~ir~~~~~~y~~  580 (655)
                       .++|+ |+||+||..|+-|...      --|-+.+.||+++.+|-.+
T Consensus       198 -~g~kiYGagi~SSp~E~~~A~~~~~p~~~pfdl~~vmRtpyrid~~Q  244 (291)
T COG3186         198 -GGLKIYGAGILSSPTELVYALESDSPNRIPFDLEQVMRTPYRIDTFQ  244 (291)
T ss_pred             -ccceeecceeecCchhhhhhhcCCCcccCCcCHHHHhhcccccCccc
Confidence             88999 9999999999999832      2567778999999876555

>cd03348 pro_PheOH Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH)

Probab=99.97  E-value=1.3e-32  Score=274.62  Aligned_cols=132  Identities=32%  Similarity=0.551  Sum_probs=116.4

Q ss_pred             CCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeE
Q psy14589        470 PSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSL  543 (655)
Q Consensus       470 ~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~  543 (655)
                      ....+||+|-   |++   +-.|.+.+...+..      ..|+..|+++.++||+|.++|         +.+.++|||++
T Consensus         6 ~~~~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~L~l~~d~IPql~~vn---------~~L~~~TGw~~   70 (228)
T cd03348           6 QGQIDYTPEE---HAV---WRTLYERQAKLLPGRACDAFLEGLEKLGLPTDRIPDFADVS---------ERLKAATGWTV   70 (228)
T ss_pred             CCcccCCHHH---HHH---HHHHHHHHHHHhhcccCHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHhccCCEE
Confidence            4567899888   776   44444444443332      348888889999999999999         77888999999


Q ss_pred             eecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCce
Q psy14589        544 RPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       544 ~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~  616 (655)
                      ++++||||...||++||+|+||+|+|||++++++|+||||||||+|||||||+||+||||+|+||++|++|+.
T Consensus        71 ~pV~Glip~~~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGHvPmL~~p~fAdf~q~~G~~~l~a~~  143 (228)
T cd03348          71 VAVPGLIPDDEFFEHLANRRFPVTNFIRRPEELDYLQEPDIFHDIFGHVPMLTNPVFADFMQAYGKGGLKATG  143 (228)
T ss_pred             EecCCcCCHHHHHHHHhcCCCceeeeecCccccCCCCCcHHHHHHhcccHhhcCHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999987

PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor.

>TIGR01267 Phe4hydrox_mono phenylalanine-4-hydroxylase, monomeric form

Probab=99.97  E-value=3.7e-32  Score=273.69  Aligned_cols=133  Identities=29%  Similarity=0.520  Sum_probs=115.9

Q ss_pred             CCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeE
Q psy14589        470 PSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSL  543 (655)
Q Consensus       470 ~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~  543 (655)
                      ....+||+|-   |++   +-.|.+++...+..      ..|+..+|++.++||+|.++|         +.++++|||++
T Consensus         6 q~~~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~lgl~~d~IPql~~vn---------~~L~~~TGw~~   70 (248)
T TIGR01267         6 QGFDHYSEEE---HAV---WNTLITRQLKLIEGRACQEYLDGIEQLGLPHDRIPDFDEIN---------RKLQATTGWRI   70 (248)
T ss_pred             CCcccCCHHH---HHH---HHHHHHHHHHHhhccccHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHhccCCEE
Confidence            4457899888   666   33344444333322      348888899999999999999         77888999999


Q ss_pred             eecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceE
Q psy14589        544 RPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYL  617 (655)
Q Consensus       544 ~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~  617 (655)
                      ++++||||...||++||+|+||+|+|||++++++|+||||+|||+|||||||+||+||+|+|+||++|++|+..
T Consensus        71 ~pV~Gli~~~~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGH~P~L~~P~FA~f~q~~G~~~l~a~~~  144 (248)
T TIGR01267        71 AAVPGLIPFQTFFEHLANRRFPVTTWLRTPEELDYLQEPDIFHDIFGHVPLLTNPVFADFTHTYGKLGLKASAL  144 (248)
T ss_pred             EecCCcCCHHHHHHHHhcCccceeeeecCccccCCCCCchHHHHHhccccccCChHHHHHHHHHHHHHhCCCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999853

This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase.

>cd00361 arom_aa_hydroxylase Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

Probab=99.97  E-value=4.4e-32  Score=270.04  Aligned_cols=129  Identities=53%  Similarity=0.793  Sum_probs=112.3

Q ss_pred             CCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEeec
Q psy14589        473 PLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPV  546 (655)
Q Consensus       473 ~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~g  546 (655)
                      .+||+|-   |++   +-.|.+.+...+..      ..|+..|+.+.++||+|.++|         +.+.++|||+++++
T Consensus         3 ~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~l~l~~d~IPql~~in---------~~L~~~TGw~~~pV   67 (221)
T cd00361           3 VDYTEEE---HAT---WRTLYRRLKKLLPTHACREYLEGLELLGLPEDRIPQLEDVS---------EFLKALTGWTLVPV   67 (221)
T ss_pred             CcCCHHH---HHH---HHHHHHHHHHHhccccCHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHhhcCCEEEec
Confidence            5677777   555   33333333333322      358888889999999999999         78888999999999


Q ss_pred             ccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCce
Q psy14589        547 AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       547 ~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~  616 (655)
                      +||||...||++||+|+||+|+|||++++++|+||||+|||+|||||||+||+||||+|+||++|++|+.
T Consensus        68 ~gli~~~~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~~GH~P~L~~p~fAdf~q~~G~~~l~a~~  137 (221)
T cd00361          68 AGLISPRDFFALLAFRVFPVTQYIRHPEEPDYTPEPDIFHELFGHVPLLADPSFADFSQEYGLASLGASD  137 (221)
T ss_pred             CCcCCHHHHHHHHhcCCCceeeeecCcCCCCCCCCChhHHHHhccchhhcCHHHHHHHHHHHHHHhCcCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999986

PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers.

>PRK11913 phhA phenylalanine 4-monooxygenase; Reviewed

Probab=99.97  E-value=5.1e-32  Score=277.19  Aligned_cols=139  Identities=32%  Similarity=0.530  Sum_probs=119.4

Q ss_pred             eeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCC
Q psy14589        464 TQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPD  537 (655)
Q Consensus       464 t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~  537 (655)
                      ++|+-.....+||+|-   |++   +-.|.+.+...+..      ..|+..||++.++||+|.++|         +.+++
T Consensus        16 ~~y~~~q~~~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~L~l~~d~IPql~~in---------~~L~~   80 (275)
T PRK11913         16 ADYTADQPWIDYTAEE---HAI---WQTLYERQLALLPGRACDEFLEGLEALGLPKDRIPQLDEIN---------RVLQA   80 (275)
T ss_pred             HhccCCCCcccCCHHH---HHH---HHHHHHHHHHHhccccCHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHh
Confidence            4566445578999998   766   33344443333322      347888889999999999999         78888


Q ss_pred             CCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceE
Q psy14589        538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYL  617 (655)
Q Consensus       538 ~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~  617 (655)
                      +|||++++++||||...||++||+|+||+|+|||++++++|+||||||||+|||||||+||+||||+|+||++|++|+..
T Consensus        81 ~TGw~~~pV~Glip~~~Ff~~LA~r~Fp~t~~IR~~~~~~YtpEPDifHevfGHvPmL~~p~FAdf~q~~G~~~l~a~~~  160 (275)
T PRK11913         81 ATGWQVVPVPGLIPFDVFFELLANRRFPVATFIRRPEELDYLQEPDIFHDVFGHVPLLTNPVFADFMQAYGKLGLRASKE  160 (275)
T ss_pred             hcCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCCCCCchHHHHhccchhhcCHHHHHHHHHHHHHHhCcChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998753

>cd03346 eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH)

Probab=99.96  E-value=7.5e-31  Score=268.47  Aligned_cols=147  Identities=52%  Similarity=0.831  Sum_probs=120.4

Q ss_pred             HHHHHhhhcCccceeeec--cCCCCCCCCCCchhhhhh--------cCCCCccCChhHHHHHHHHhhhcCCCChHHHHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYI--RHPSKPLYTPEPDVCHEL--------LGHVPLFADPSFAQFSQEIGLASLGAPDEYVERL  519 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~i--r~~~~~~y~~epd~~He~--------~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l  519 (655)
                      |..++.+|      ++|.  -+....+||+|-   |++        ..-.|=.|.++|-+-++.++ +..|++.++||+|
T Consensus        40 r~~~a~~a------~~y~~g~~ip~i~YT~~E---~~~W~~l~~r~~~l~~~~Ac~eyl~gl~~L~-~~~gl~~d~IPql  109 (287)
T cd03346          40 RKYFADVA------MNYKHGDPIPRVEYTEEE---IKTWGTVYRELNRLYPTHACREYLKNLPLLE-KHCGYREDNIPQL  109 (287)
T ss_pred             HHHHHHHH------hhccCCCCCCccccCHHH---HHHHHHHHHHHHHHhhccccHHHHHHHHHHH-hccCCCcCCCCCH
Confidence            45566554      5666  333366899997   554        33334444444444333332 3456899999999


Q ss_pred             HhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCch
Q psy14589        520 ATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS  599 (655)
Q Consensus       520 ~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~  599 (655)
                      .++|         +.+.+.|||++++|+||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+||+
T Consensus       110 ~dvn---------~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~r~Fp~t~~IR~~~~~~YtpEPDifHEl~GHvPlLadp~  180 (287)
T cd03346         110 EDVS---------RFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLADPS  180 (287)
T ss_pred             HHHH---------HHHHhccCCEEEecCCcCCHHHHHHHHhcCcccceeeecCccccCCCCCCchHHHHhccchhhcCHH
Confidence            9999         7788899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCc
Q psy14589        600 FAQFSQEIGLASLGAP  615 (655)
Q Consensus       600 f~~~~~~~g~~~~~a~  615 (655)
                      ||||+|+||++|++|+
T Consensus       181 FA~f~q~~G~~~l~a~  196 (287)
T cd03346         181 FAQFSQEIGLASLGAS  196 (287)
T ss_pred             HHHHHHHHHHHhcCCC
Confidence            9999999999999986

TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter.

>cd03347 eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH)

Probab=99.96  E-value=4.5e-31  Score=271.81  Aligned_cols=150  Identities=59%  Similarity=0.908  Sum_probs=122.8

Q ss_pred             HHHHHhhhcCccceeeec--cCCCCCCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhh
Q psy14589        450 RDFLAGLAFRVFHSTQYI--RHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS  522 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~i--r~~~~~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l  522 (655)
                      |..++.+|      ++|.  -+....+||+|-     -++..+..-.|-.|.++|-+-+..+ +..+|++.++||+|.++
T Consensus        40 r~~~a~~a------~~y~~g~~ip~v~YT~eE~~~W~~l~~r~~~l~~~~Ac~eyl~~l~~L-~~~~gl~~d~IPql~dv  112 (306)
T cd03347          40 RKEFADIA------YNYKHGQPIPRVEYTEEEKKTWGTVFRELKSLYPTHACYEYNHVFPLL-EKNCGFSEDNIPQLEDV  112 (306)
T ss_pred             HHHHHHHH------HhccCCCCCCcCcCCHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHH-HHhcCCCcCCCCCHHHH
Confidence            55666666      5565  444467899997     2223333444555555544433222 24558999999999999


Q ss_pred             hhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHH
Q psy14589        523 NNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQ  602 (655)
Q Consensus       523 ~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~  602 (655)
                      |         +.+.+.|||++++|+||||+..||++||+|+||+|+|||++++++|+||||+|||++||||||+||+|||
T Consensus       113 n---------~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~YtpEPDifHEl~GHvPlLadp~FA~  183 (306)
T cd03347         113 S---------NFLQTCTGFRLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDICHELLGHVPLFADPSFAQ  183 (306)
T ss_pred             H---------HHHHhccCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCCCCCchHHHHhccchhhcCHHHHH
Confidence            9         7788899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCc
Q psy14589        603 FSQEIGLASLGAP  615 (655)
Q Consensus       603 ~~~~~g~~~~~a~  615 (655)
                      |+|++|++|++|+
T Consensus       184 f~q~~G~~~l~a~  196 (306)
T cd03347         184 FSQEIGLASLGAP  196 (306)
T ss_pred             HHHHHHHHhcCCC
Confidence            9999999999998

PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria.

>cd03345 eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH)

Probab=99.96  E-value=2.9e-30  Score=264.98  Aligned_cols=145  Identities=50%  Similarity=0.784  Sum_probs=118.9

Q ss_pred             HHHHHhhhcCccceeeeccCC---CCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcC----CCChHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHP---SKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASL----GAPDEYV  516 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~---~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l----~~~~~~i  516 (655)
                      |..++.+|      ++|. +.   ...+||+|-   |++   +-.|.+.....+..      ..|+..|    |++.++|
T Consensus        39 r~~~a~~a------~~y~-~g~~ip~v~YT~eE---~~~---W~~l~~r~~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~I  105 (298)
T cd03345          39 RKLIAEIA------FQYK-HGDPIPRVEYTAEE---IAT---WKEVYKTLKDLHATHACKEYLDAFQLLEKECGYSEDRI  105 (298)
T ss_pred             HHHHHHHH------hcCc-CCCCCCcccCCHHH---HHH---HHHHHHHHHHHHhhhhhHHHHHHHHHHHhccCCCCCCC
Confidence            55666666      4555 33   245788887   665   33333333332222      2355555    8999999


Q ss_pred             HHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCccccc
Q psy14589        517 ERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFA  596 (655)
Q Consensus       517 ~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~  596 (655)
                      |+|.++|         +.+.+.|||++++|+||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+
T Consensus       106 Pql~dvn---------~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~YtpEPDi~HEl~GHvPlLa  176 (298)
T cd03345         106 PQLEDVS---------EFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLA  176 (298)
T ss_pred             CCHHHHH---------HHHHhccCCEEEecCccCCHHHHHHHHhcCcccccceecCCcccCCCCCCchHHHHhccchhhC
Confidence            9999999         7778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHhhcccCCce
Q psy14589        597 DPSFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       597 ~p~f~~~~~~~g~~~~~a~~  616 (655)
                      ||+||||+|+||++|++|+.
T Consensus       177 dp~FA~f~q~~G~~~l~a~~  196 (298)
T cd03345         177 DPTFAQFSQDIGLASLGASD  196 (298)
T ss_pred             CHHHHHHHHHHHHHhcCCCH
Confidence            99999999999999999863

TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline.

>COG3186 Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]

Probab=99.96  E-value=4.2e-30  Score=254.18  Aligned_cols=124  Identities=32%  Similarity=0.503  Sum_probs=111.6

Q ss_pred             hhhhcCCCCccCChhHHHH----HHH--HhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHH
Q psy14589        482 CHELLGHVPLFADPSFAQF----SQE--IGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDF  555 (655)
Q Consensus       482 ~He~~gh~p~l~~~~~a~~----~~~--~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~  555 (655)
                      =|.+   +--|.++++.-.    +|+  -|+..+|++.++||+++++|         +.++++|||++.+|+||||...|
T Consensus        46 eh~v---W~tL~~rq~~l~~~rac~~fLdgle~lgL~~~~ipd~~~in---------~~l~~~Tgw~v~~Vpglvp~~~f  113 (291)
T COG3186          46 EHAV---WRTLIDRQTKLLKGRACQEFLDGLEALGLPLSRIPDFDEIN---------RVLQRETGWQVVAVPGLVPFDVF  113 (291)
T ss_pred             HHHH---HHHHHHHHHHHHhccchHHHHHHHHHcCCCcccCCCHHHHH---------HHHHHhcCcEEEecCccCChHHH
Confidence            3666   555666666532    233  39999999999999999999         88899999999999999999999


Q ss_pred             HHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceE
Q psy14589        556 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYL  617 (655)
Q Consensus       556 ~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~  617 (655)
                      |+|||+|+||+++|||+++++||++|||+|||+|||||||+||+||+|+|.||++|.||.-+
T Consensus       114 f~lLanrrFPva~~mRt~~eldylqePD~fHdvfGHvP~Lt~P~FAdf~~~yG~lg~ka~~~  175 (291)
T COG3186         114 FDLLANRRFPVATFMRTPDELDYLQEPDIFHDVFGHVPMLTHPVFADFMQAYGKLGLKAIEL  175 (291)
T ss_pred             HHHHhhccCcHHHHhcCHhhcccccCccHHHHHhccCchhcCchHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999998644

>TIGR01269 Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric

Probab=99.95  E-value=1.9e-29  Score=269.90  Aligned_cols=154  Identities=48%  Similarity=0.668  Sum_probs=124.8

Q ss_pred             hHHHHHhhhcCccceeeeccCCCCCCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhh
Q psy14589        449 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSN  523 (655)
Q Consensus       449 ~~~f~~~la~r~f~~t~~ir~~~~~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~  523 (655)
                      -|..++.+|+    ..+|--.....+||+|-     -++..+..-.|-.|.++|-+-++.++ ...|++.++||+|.++|
T Consensus       162 RR~~~a~~a~----~~~~g~~iP~v~YT~eE~~tW~~l~~rl~~l~~~~Ac~eyl~gl~~L~-~~~gl~~d~IPqL~dvs  236 (457)
T TIGR01269       162 RREAIAEIAF----QYKYGDPIPEVEYTKEEIETWRLVFTTMKDLHASHACREYIDAFQLLE-KYCNYNSESIPQLQTIS  236 (457)
T ss_pred             HHHHHHHHhh----hccCCCCCCcCccCHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH-hhcCCCcCCCCCHHHHH
Confidence            3667777776    33444555577899998     12233333345555555544444433 33568999999999999


Q ss_pred             hhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHH
Q psy14589        524 NFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQF  603 (655)
Q Consensus       524 w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~  603 (655)
                               +.+.+.|||++++++||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+||+||||
T Consensus       237 ---------~~L~~~TGw~l~pV~GLl~~rdF~~~LA~RvFp~TqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp~FA~F  307 (457)
T TIGR01269       237 ---------EFLHRTTGFRLRPVAGLLSARDFLASLAFRVFQCTQYIRHHSSPMHTPEPDCIHELLGHMPMLADRQFAQF  307 (457)
T ss_pred             ---------HHHHhccCCEEEeccccCCHHHHHHHHhcCcccceeeecCccccCCCCCCchHHHHhcccccccCHHHHHH
Confidence                     77788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCce
Q psy14589        604 SQEIGLASLGAPY  616 (655)
Q Consensus       604 ~~~~g~~~~~a~~  616 (655)
                      +|+||++|++|+.
T Consensus       308 ~q~~G~asl~As~  320 (457)
T TIGR01269       308 SQEIGLASLGASE  320 (457)
T ss_pred             HHHHHHHhcCCCH
Confidence            9999999999864

This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.

>TIGR01268 Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetrameric form

Probab=99.95  E-value=3.7e-29  Score=270.51  Aligned_cols=152  Identities=56%  Similarity=0.859  Sum_probs=125.4

Q ss_pred             hHHHHHhhhcCccceeeec--cCCCCCCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHh
Q psy14589        449 SRDFLAGLAFRVFHSTQYI--RHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLAT  521 (655)
Q Consensus       449 ~~~f~~~la~r~f~~t~~i--r~~~~~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~  521 (655)
                      -|..++.+|      ++|.  -.....+||+|-     -++..+..-.|-.|.++|-+-+..+. ..+|++.++||+|.+
T Consensus       141 rr~~~a~~a------~~y~~g~~ip~v~YT~~e~~~W~~l~~~~~~l~~~~Ac~eyl~~l~~L~-~~~g~~~d~IPql~d  213 (436)
T TIGR01268       141 RRKQFADIA------FNYKHGQPIPRVEYTDEEIATWRTVFNNLTVLYPTHACQEYNHIFPLLQ-QNCGFREDNIPQLED  213 (436)
T ss_pred             HHHHHHHHH------hhCCCCCCCCccccCHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH-HhcCCCccCCCCHHH
Confidence            356666666      5565  344456799997     12233444455556665555444432 567799999999999


Q ss_pred             hhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHH
Q psy14589        522 SNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFA  601 (655)
Q Consensus       522 l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~  601 (655)
                      +|         +.+.+.|||++++++||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+||+||
T Consensus       214 vs---------~~L~~~TGw~~~pV~Gll~~~~F~~~LA~r~F~~t~yiR~~~~~~YtpEPDi~Hel~GHvPlla~p~fA  284 (436)
T TIGR01268       214 VS---------QFLQDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSKPMYTPEPDICHELLGHVPLFADVEFA  284 (436)
T ss_pred             HH---------HHHHhccCCEEEecCCcCCHHHHHHHHhcCccceeeeecccccccCCCCChhHHHHhccchhhCCHHHH
Confidence            99         777889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCce
Q psy14589        602 QFSQEIGLASLGAPY  616 (655)
Q Consensus       602 ~~~~~~g~~~~~a~~  616 (655)
                      ||+|++|++|++|+.
T Consensus       285 ~f~q~~G~~~l~a~~  299 (436)
T TIGR01268       285 QFSQEIGLASLGAPD  299 (436)
T ss_pred             HHHHHHHHhhcCCCH
Confidence            999999999999975

The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PubMed:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered.

>TIGR01270 Trp_5_monoox tryptophan 5-monooxygenase, tetrameric

Probab=99.95  E-value=3.1e-29  Score=271.61  Aligned_cols=149  Identities=50%  Similarity=0.778  Sum_probs=122.3

Q ss_pred             hHHHHHhhhcCccceeeec--cCCCCCCCCCCchhhhhh--------cCCCCccCChhHHHHHHHHhhhcCCCChHHHHH
Q psy14589        449 SRDFLAGLAFRVFHSTQYI--RHPSKPLYTPEPDVCHEL--------LGHVPLFADPSFAQFSQEIGLASLGAPDEYVER  518 (655)
Q Consensus       449 ~~~f~~~la~r~f~~t~~i--r~~~~~~y~~epd~~He~--------~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~  518 (655)
                      -|..++.+|      ++|.  -.....+||||-   |++        ..-.|-.|.++|-+-+..+. ...|++.++||+
T Consensus       168 rr~~~a~~a------~~y~~g~~ip~v~YT~~E---~~~W~~l~~~~~~l~~~~Ac~eyl~gl~~L~-~~~g~~~d~IPq  237 (464)
T TIGR01270       168 RRMMFADLA------LNYKHGEPIPRVEYTEEE---RKTWGTIYRELRRLYKTHACKEFLDNLPLLE-KYCGYREDNIPQ  237 (464)
T ss_pred             HHHHHHHHH------HhccCCCCCCccccCHHH---HHHHHHHHHHHHHHhhccccHHHHHHHHHHH-hhcCCCccCCCC
Confidence            466777776      4555  344456799998   554        33344445554444333331 233789999999


Q ss_pred             HHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCc
Q psy14589        519 LATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP  598 (655)
Q Consensus       519 l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p  598 (655)
                      |.++|         +.+.++|||++++++||||+..||++||+|+||+|+|||++++++|+||||||||+|||||||+||
T Consensus       238 l~dvs---------~~L~~~TGw~~~pV~Gll~~r~F~~~LA~R~F~~tqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp  308 (464)
T TIGR01270       238 LEDVS---------KFLKAKTGFRLRPVAGYLSARDFLSGLAFRVFHCTQYVRHSADPFYTPEPDTCHELLGHMPLLADP  308 (464)
T ss_pred             HHHHH---------HHHHhccCCEEEeccccCCHHHHHHHHhcCccceeeeeccccccCcCCCCchHHHHhcccchhcCH
Confidence            99999         777789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhcccCCce
Q psy14589        599 SFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       599 ~f~~~~~~~g~~~~~a~~  616 (655)
                      +||||+|+||++|++|+.
T Consensus       309 ~FA~f~q~~G~~sl~a~~  326 (464)
T TIGR01270       309 SFAQFSQEIGLASLGASE  326 (464)
T ss_pred             HHHHHHHHHHHhhcCCCH
Confidence            999999999999999863

This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.

>PRK14055 aromatic amino acid hydroxylase; Provisional

Probab=99.94  E-value=1.3e-28  Score=253.85  Aligned_cols=119  Identities=25%  Similarity=0.370  Sum_probs=106.3

Q ss_pred             hhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHH
Q psy14589        483 HELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFL  556 (655)
Q Consensus       483 He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~  556 (655)
                      |++   |--|..++.+.+..      ..|++.++++.+ +|.+.++|         +.+++.|||++++|+||||...||
T Consensus       104 h~i---W~~L~~RQl~ll~~~Ac~eYLeGl~~L~L~~D-~~~L~eVn---------~~L~~~TGW~v~pVpGLIp~~~Ff  170 (362)
T PRK14055        104 RNL---WYRLLSSRFSLWKSYCPRFFLDYLEAFGLLSD-FLDHQAVI---------KFFELETHFSYYPVSGFVAPHQYL  170 (362)
T ss_pred             HHH---HHHHHHHHHHHHhhhccHHHHHHHHhcCCCcc-cCChHHHH---------HHHHhccCCEEEecCCcCCHHHHH
Confidence            666   44566666666544      248888889888 77789999         777899999999999999999999


Q ss_pred             HhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCC
Q psy14589        557 AGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA  614 (655)
Q Consensus       557 ~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a  614 (655)
                      ++||+|+||+|+|||++++++|+||||+|||+|||||||+||+||+|+|+||++|++|
T Consensus       171 ~~LA~R~FPvttyIR~~ee~dYtpEPDifHEvfGHvPmLanP~FAdF~q~~G~~glkA  228 (362)
T PRK14055        171 SLLQDRYFPIASVMRTLDKDNFSLTPDLIHDLLGHVPWLLHPSFSEFFINMGRLFTKV  228 (362)
T ss_pred             HHHhcCeeceeeeeccccccCCCCCchHHHHhhccchhhcCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999987

>PRK14056 phenylalanine 4-monooxygenase; Provisional

Probab=99.94  E-value=2.1e-28  Score=266.92  Aligned_cols=135  Identities=24%  Similarity=0.398  Sum_probs=114.5

Q ss_pred             eeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHH------HHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCC
Q psy14589        464 TQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQF------SQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPD  537 (655)
Q Consensus       464 t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~------~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~  537 (655)
                      .+|+-.....+|||+-   |.+   |-.+.......+      ....|+..+|++.++||+|.++|         +.+. 
T Consensus        10 ~~~v~~Q~y~~YT~~e---hav---Wr~v~~r~~~~l~~~Ac~~YL~GL~~lgl~~d~IPql~emN---------~~L~-   73 (578)
T PRK14056         10 KPFVSPQHYDQYTPVD---HAV---WRYVMRQNHSFLKDVAHPAYLNGLQSTGINIERIPKVEEMN---------ECLA-   73 (578)
T ss_pred             HhhccCCChhhCCHHH---HHH---HHHHHHHHHHHhccccCHHHHHHHHHcCCCccCCCCHHHHH---------HHHH-
Confidence            4566666788999998   665   322333322222      22357788999999999999999         5554 


Q ss_pred             CCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCC
Q psy14589        538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA  614 (655)
Q Consensus       538 ~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a  614 (655)
                      +|||++++++||||...||++||+|+||+|+|||++++++|+||||||||++||+|||+||+||+|+|+||++|++|
T Consensus        74 ~tGW~~vpV~GlIp~~~Ffe~LA~rvFpit~~IR~~e~i~YtPEPDIfHE~~GH~P~LadP~fAdf~q~~G~iG~kA  150 (578)
T PRK14056         74 EIGWGAVAVDGFIPPVAFFEFQGHGVLPIATDIRKVENIEYTPAPDIIHEAAGHAPILADPTYAEYLRRFGEIGAKA  150 (578)
T ss_pred             HcCCEEEeccccCCHHHHHHHHhcCeeceeeeeccccccCCCCCCchhhhhhccchhhcCHHHHHHHHHHHHHHHhh
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999987

>PF00351 Biopterin_H: Biopterin-dependent aromatic amino acid hydroxylase; InterPro: IPR019774 Phenylalanine, tyrosine and tryptophan hydroxylases constitute a family of tetrahydrobiopterin-dependent aromatic amino acid hydroxylases, all of which are rate-limiting catalysts for important metabolic pathways []

Probab=99.94  E-value=1.5e-28  Score=255.62  Aligned_cols=148  Identities=49%  Similarity=0.760  Sum_probs=101.6

Q ss_pred             HHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhh----cCCCChHHHHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLA----SLGAPDEYVERL  519 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~----~l~~~~~~i~~l  519 (655)
                      |.+++.+|..-=    +=-.....+||+|-   |++=++   +.......+..      ..|+.    ..|.++++||+|
T Consensus        40 R~~ia~~A~~~k----~g~pip~v~YT~eE---~~tW~~---v~~rl~~l~~~~AC~eyl~~~~~L~~~~G~~~d~IPqL  109 (332)
T PF00351_consen   40 RKEIADIAFNYK----HGDPIPRVEYTEEE---HATWRT---VYRRLMKLYPTHACREYLEGFPLLEKYCGYPEDRIPQL  109 (332)
T ss_dssp             HHHHHHHHHH------TTSTTSGGG--HHH---HHHHHH---HHHHHHHHHHHHB-HHHHHHHHHHHHHHT-BTTB---H
T ss_pred             HHHHHHHHHhcc----ccCCCCcccCCHHH---HHHHHH---HHHHHHHHHhhhhhHHHHHHHHHHHhccCCCccCCCCH
Confidence            667777775321    01122346788888   666332   33332222221      11333    347899999999


Q ss_pred             HhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCch
Q psy14589        520 ATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS  599 (655)
Q Consensus       520 ~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~  599 (655)
                      .++|         +.+.++|||++++++||||+..||.+||+|+||+|+|||++++++|+||||+|||++||||||+||+
T Consensus       110 ~dvs---------~~L~~~TGw~l~pV~Gll~~rdF~~~LA~RvFp~TqyIRh~~~p~YtpEPDi~HEl~GHvPmLadp~  180 (332)
T PF00351_consen  110 EDVS---------EFLKERTGWQLRPVAGLLSARDFFAGLAFRVFPCTQYIRHHSEPDYTPEPDIFHELFGHVPMLADPS  180 (332)
T ss_dssp             HHHH---------HHHHHHHS-EEEEESSEB-HHHHHHHHTTTEEEEESS---TTSTTS-SS--HHHHHHHTHHHHTSHH
T ss_pred             HHHh---------HHHHhhcCeEEEEeCcccCHHHHHHHHhcCcCceEeeecCCCCCCCCCCCccHhHHhccchhhhcHH
Confidence            9999         6667789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCce
Q psy14589        600 FAQFSQEIGLASLGAPY  616 (655)
Q Consensus       600 f~~~~~~~g~~~~~a~~  616 (655)
                      ||||+|++|+++++|+.
T Consensus       181 FA~f~q~~G~asl~asd  197 (332)
T PF00351_consen  181 FADFSQEIGLASLGASD  197 (332)
T ss_dssp             HHHHHHHHHHHHTT--H
T ss_pred             HHHHHHHHHHHHhhhhH
Confidence            99999999999999975

The proteins are structurally and functionally related, each containing iron, and catalysing ring hydroxylation of aromatic amino acids, using tetra-hydrobiopterin (BH4) as a substrate. All are regulated by phosphorylation at serines in their N-termini. It has been suggested that the proteins each contain a conserved C-terminal catalytic (C) domain and an unrelated N-terminal regulatory (R) domain. It is possible that the R domains arose from genes that were recruited from different sources to combine with the common gene for the catalytic core. Thus, by combining with the same C domain, the proteins acquired the unique regulatory properties of the separate R domains. A variety of enzymes belong to this family that includes, phenylalanine-4-hydroxylase from Chromobacterium violaceum where it is copper-dependent; it is iron-dependent in Pseudomonas aeruginosa, phenylalanine-4-hydroxylase catalyzes the conversion of phenylalanine to tyrosine. In humans, deficiencies are the cause of phenylketonuria, the most common inborn error of amino acid metabolism [], tryptophan 5-hydroxylase catalyzes the rate-limiting step in serotonin biosynthesis: the conversion of tryptophan to 3-hydroxy-anthranilate and tyrosine 3-hydroxylase catalyzes the rate limiting step in catecholamine biosynthesis: the conversion of tyrosine to 3,4-dihydroxy-L-phenylalanine.; GO: 0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen, 0055114 oxidation-reduction process; PDB: 1PHZ_A 2PHM_A 2V28_A 2V27_A 1PAH_A 1DMW_A 1TG2_A 1KW0_A 1MMT_A 1TDW_A ....

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=99.92  E-value=1.9e-24  Score=228.97  Aligned_cols=243  Identities=14%  Similarity=0.059  Sum_probs=184.3

Q ss_pred             hhhhHHhhhhcc---ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eeec---CCCCCCCC
Q psy14589         13 ETKTWGEVFRNL---TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPV---AGLLSSRD   83 (655)
Q Consensus        13 e~~~W~~~~~~~---~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v---~~l~~~~s   83 (655)
                      ++..|+.- +|+   ......++|.+|+.|.+++|++..+     ++..       ..+||+   +++.   -.++++++
T Consensus        75 ~V~~~k~G-DrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~-----~gy~-------~~GGyaeyv~v~~~~~~~iP~~~d  141 (339)
T COG1064          75 GVTGLKVG-DRVGVGWLVISCGECEYCRSGNENLCPNQKI-----TGYT-------TDGGYAEYVVVPARYVVKIPEGLD  141 (339)
T ss_pred             CCccCCCC-CEEEecCccCCCCCCccccCcccccCCCccc-----ccee-------ecCcceeEEEEchHHeEECCCCCC
Confidence            34445444 333   3577889999999999888887444     2221       123333   3432   34667889


Q ss_pred             HHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCC
Q psy14589         84 FLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT  163 (655)
Q Consensus        84 ~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~  163 (655)
                      +++||++.|++.|+|.+|++ .++ ++|++|+|+|+ ||+|++++|+||++||+|++++++++|++.+++||||++||.+
T Consensus       142 ~~~aApllCaGiT~y~alk~-~~~-~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~  218 (339)
T COG1064         142 LAEAAPLLCAGITTYRALKK-ANV-KPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS  218 (339)
T ss_pred             hhhhhhhhcCeeeEeeehhh-cCC-CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence            99999999999999999976 677 89999999999 7999999999999999999999999999999999999999977


Q ss_pred             ccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhhee
Q psy14589        164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFL  243 (655)
Q Consensus       164 ~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~  243 (655)
                      +.   +..+.+++.   +|+++|+++..+   ++.+++.|+++|+++++|+                             
T Consensus       219 ~~---~~~~~~~~~---~d~ii~tv~~~~---~~~~l~~l~~~G~~v~vG~-----------------------------  260 (339)
T COG1064         219 DS---DALEAVKEI---ADAIIDTVGPAT---LEPSLKALRRGGTLVLVGL-----------------------------  260 (339)
T ss_pred             Cc---hhhHHhHhh---CcEEEECCChhh---HHHHHHHHhcCCEEEEECC-----------------------------
Confidence            43   566666653   899999999447   9999999999999999993                             


Q ss_pred             ecc-ccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHH
Q psy14589        244 LLS-QPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE  322 (655)
Q Consensus       244 ll~-~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~  322 (655)
                       .. .+...........+..++..++.. ...++.++|+..++++|+....|..|+.                ++.++++
T Consensus       261 -~~~~~~~~~~~~~li~~~~~i~GS~~g-~~~d~~e~l~f~~~g~Ikp~i~e~~~l~----------------~in~A~~  322 (339)
T COG1064         261 -PGGGPIPLLPAFLLILKEISIVGSLVG-TRADLEEALDFAAEGKIKPEILETIPLD----------------EINEAYE  322 (339)
T ss_pred             -CCCcccCCCCHHHhhhcCeEEEEEecC-CHHHHHHHHHHHHhCCceeeEEeeECHH----------------HHHHHHH
Confidence             10 000000011123356788888888 6778999999999999996433677754                3456777


Q ss_pred             HHHcc
Q psy14589        323 SLRSS  327 (655)
Q Consensus       323 ~L~~~  327 (655)
                      +|++-
T Consensus       323 ~m~~g  327 (339)
T COG1064         323 RMEKG  327 (339)
T ss_pred             HHHcC
Confidence            77653

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=99.90  E-value=5.8e-23  Score=219.68  Aligned_cols=199  Identities=21%  Similarity=0.171  Sum_probs=161.4

Q ss_pred             cCChhhhhhHHhhhhcc---ccccccccchhHhhhhhhHHHhCCC-C---CCCCCCcc---cccccccccCC--------
Q psy14589          8 DYTAEETKTWGEVFRNL---TKLYPTHACKEHNHVFPLLIQNCGY-A---EDNIPQLE---DISKFLKDSTG--------   69 (655)
Q Consensus         8 ~y~~~e~~~W~~~~~~~---~~~l~~~aC~~~~~G~~~l~~~~~y-~---~~~iP~le---~V~~~l~~~~g--------   69 (655)
                      .++.+|+..+.++..++   .+++.+......|-. |++.+.+.. +   .+.+|+.+   .|.+....+++        
T Consensus         8 ~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~-D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~   86 (326)
T COG0604           8 EFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPI-DVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVA   86 (326)
T ss_pred             ccCCCceeEEEecCCCCCCCCeEEEEEEEeecChH-HHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEE
Confidence            34555556676666543   678888899998888 888888763 2   46777766   33333333322        


Q ss_pred             ----------cE---Eeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHH
Q psy14589         70 ----------FS---LRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKA  133 (655)
Q Consensus        70 ----------~~---~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~  133 (655)
                                |+   ++|.   -.+++++|+++||+++++++|||+++.+...+ ++|++|||+||+||||++++|+||+
T Consensus        87 ~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l-~~g~~VLV~gaaGgVG~~aiQlAk~  165 (326)
T COG0604          87 ALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL-KPGETVLVHGAAGGVGSAAIQLAKA  165 (326)
T ss_pred             EccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHH
Confidence                      22   1221   12457899999999999999999999998888 8999999999999999999999999


Q ss_pred             cCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEE
Q psy14589        134 YGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       134 ~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~  211 (655)
                      +|+++++++++++|.+.++++|||++|||++.   ++.+.+++.++  ++|+|+|++|+++   +..++++|+++|++++
T Consensus       166 ~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~---~~~~~v~~~t~g~gvDvv~D~vG~~~---~~~~l~~l~~~G~lv~  239 (326)
T COG0604         166 LGATVVAVVSSSEKLELLKELGADHVINYREE---DFVEQVRELTGGKGVDVVLDTVGGDT---FAASLAALAPGGRLVS  239 (326)
T ss_pred             cCCcEEEEecCHHHHHHHHhcCCCEEEcCCcc---cHHHHHHHHcCCCCceEEEECCCHHH---HHHHHHHhccCCEEEE
Confidence            99888888888888889999999999999885   69999998875  7999999999999   8999999999999999


Q ss_pred             Eee
Q psy14589        212 FFF  214 (655)
Q Consensus       212 v~~  214 (655)
                      +|.
T Consensus       240 ig~  242 (326)
T COG0604         240 IGA  242 (326)
T ss_pred             Eec
Confidence            983

>KOG3820|consensus

Probab=99.89  E-value=3.8e-24  Score=223.48  Aligned_cols=151  Identities=56%  Similarity=0.864  Sum_probs=126.6

Q ss_pred             hHHHHHhhhcCccceeeeccCCCC---CCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHH
Q psy14589        449 SRDFLAGLAFRVFHSTQYIRHPSK---PLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLA  520 (655)
Q Consensus       449 ~~~f~~~la~r~f~~t~~ir~~~~---~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~  520 (655)
                      -|.||+.+|+..       ||.+.   .+||+|-     -++-++-+=.|--+=++|.+....+- .-.|..++.||.|.
T Consensus       163 RRk~fadiA~ny-------KhGdpIP~veYT~eEikTWg~Vf~~L~~Ly~~HAC~ey~~~f~lLe-~~cg~~ednIPQLe  234 (461)
T KOG3820|consen  163 RRKFFADIAFNY-------KHGDPIPRVEYTEEEIKTWGTVFRTLTDLYPTHACAEYLDNFPLLE-KYCGYREDNIPQLE  234 (461)
T ss_pred             HHHHHHHHHHhc-------ccCCCCCccccCHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-HhcCcCCCCcchHH
Confidence            378999999863       45544   4788876     24444444466666666666655443 45678999999999


Q ss_pred             hhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchH
Q psy14589        521 TSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSF  600 (655)
Q Consensus       521 ~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f  600 (655)
                      +++         +=+.+.||.++|++|||||+.+|+.-||.|+|.+|+||||...+-||||||+|||++||||||+||+|
T Consensus       235 DVs---------~FLk~~TGF~lRPvAGlLSaRDFLagLAFRVFhcTQYiRH~s~P~yTPEPD~cHELLGHvPLfADp~F  305 (461)
T KOG3820|consen  235 DVS---------KFLKKKTGFRLRPVAGLLSARDFLAGLAFRVFHCTQYIRHHSSPFYTPEPDTCHELLGHVPLFADPSF  305 (461)
T ss_pred             HHH---------HHHHhccCceeecccccCcHHHHHhhhhhhheeeeeeeecCCCCCCCCCCchHHHHhccchhccChhH
Confidence            999         44467899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCce
Q psy14589        601 AQFSQEIGLASLGAPY  616 (655)
Q Consensus       601 ~~~~~~~g~~~~~a~~  616 (655)
                      |||+|++|.++||||+
T Consensus       306 AQFSQEIGLASLGAsD  321 (461)
T KOG3820|consen  306 AQFSQEIGLASLGASD  321 (461)
T ss_pred             HHHhHHhhhhhcCCCH
Confidence            9999999999999986

>KOG1197|consensus

Probab=99.86  E-value=5.7e-21  Score=191.32  Aligned_cols=200  Identities=16%  Similarity=0.078  Sum_probs=158.6

Q ss_pred             cCChhhhhhHHhhhh---ccccccccccchhHhhhhhhHHHhCCCC---CCCCCCcc---cccccccccCCcEE------
Q psy14589          8 DYTAEETKTWGEVFR---NLTKLYPTHACKEHNHVFPLLIQNCGYA---EDNIPQLE---DISKFLKDSTGFSL------   72 (655)
Q Consensus         8 ~y~~~e~~~W~~~~~---~~~~~l~~~aC~~~~~G~~~l~~~~~y~---~~~iP~le---~V~~~l~~~~g~~~------   72 (655)
                      ++++.|+.-|.....   ...+...+-..++.|-. |.+-|.+-|.   .+-+|++|   +|-+++..++++.+      
T Consensus        16 e~Ggydvlk~ed~pv~~papgel~iknka~GlNfi-d~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVay   94 (336)
T KOG1197|consen   16 EFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFI-DLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAY   94 (336)
T ss_pred             ccCCcceEEEeeecCCCCCCCceEEeehhcCccHH-HHHHhccccCCCCCCcCCCcccceEEEEecCCccccccccEEEE
Confidence            455666666654433   11222333333334433 6778888883   45667777   44444555544432      


Q ss_pred             ------------ee---cCCCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe
Q psy14589         73 ------------RP---VAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT  137 (655)
Q Consensus        73 ------------~~---v~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~  137 (655)
                                  +|   +..++..+++.+|||+...++|||.-+.+...+ ++|++|||+.|+||||++++|++|+.|++
T Consensus        95 l~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~v-kpGhtVlvhaAAGGVGlll~Ql~ra~~a~  173 (336)
T KOG1197|consen   95 LNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNV-KPGHTVLVHAAAGGVGLLLCQLLRAVGAH  173 (336)
T ss_pred             eccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEeccccHHHHHHHHHHhcCcE
Confidence                        11   233456788999999999999999999999999 99999999999999999999999999999


Q ss_pred             EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEeec
Q psy14589        138 VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFF  215 (655)
Q Consensus       138 Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~  215 (655)
                      +|+++++.+|++.+++.||+++||++.+   |+.+++.+.++  |+|+++|.+|.++   +..++.+||++|++|++|++
T Consensus       174 tI~~asTaeK~~~akenG~~h~I~y~~e---D~v~~V~kiTngKGVd~vyDsvG~dt---~~~sl~~Lk~~G~mVSfG~a  247 (336)
T KOG1197|consen  174 TIATASTAEKHEIAKENGAEHPIDYSTE---DYVDEVKKITNGKGVDAVYDSVGKDT---FAKSLAALKPMGKMVSFGNA  247 (336)
T ss_pred             EEEEeccHHHHHHHHhcCCcceeeccch---hHHHHHHhccCCCCceeeeccccchh---hHHHHHHhccCceEEEeccc
Confidence            9999999999999999999999999985   89999999873  9999999999999   99999999999999999853

>KOG0023|consensus

Probab=99.83  E-value=6.8e-20  Score=189.52  Aligned_cols=250  Identities=13%  Similarity=0.054  Sum_probs=175.2

Q ss_pred             hhhHHhhhhccccccc---cccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---E---eecCCCCCCCCH
Q psy14589         14 TKTWGEVFRNLTKLYP---THACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---L---RPVAGLLSSRDF   84 (655)
Q Consensus        14 ~~~W~~~~~~~~~~l~---~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~---~~v~~l~~~~s~   84 (655)
                      +..|+.- ++.+..+.   ...|++|+.|.+.+|.+..+.-..+. .++    -....||+   +   +-+-.++.+++.
T Consensus        84 V~~~kiG-D~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DG----t~~~ggf~~~~~v~~~~a~kIP~~~pl  157 (360)
T KOG0023|consen   84 VTGFKIG-DRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDG----TITQGGFQEYAVVDEVFAIKIPENLPL  157 (360)
T ss_pred             ccccccc-CeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCC----CCccCccceeEEEeeeeEEECCCCCCh
Confidence            5556544 45544444   45678888887766663222111110 000    01123344   1   123346778899


Q ss_pred             HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHHHhCCCcEEEeCC
Q psy14589         85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKAYGLGADYVVDHT  163 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a~~LGAd~vId~~  163 (655)
                      +.||++.|++.|+|.+|++. ++ .+|++|.|.|+ ||+|++++|+||+||.+|++++++.+| .+.++.||||..|+..
T Consensus       158 ~~aAPlLCaGITvYspLk~~-g~-~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~  234 (360)
T KOG0023|consen  158 ASAAPLLCAGITVYSPLKRS-GL-GPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDST  234 (360)
T ss_pred             hhccchhhcceEEeehhHHc-CC-CCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEec
Confidence            99999999999999999765 45 69999999999 679999999999999999999998844 4455679999999987


Q ss_pred             ccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhh
Q psy14589        164 IRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFY  241 (655)
Q Consensus       164 ~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (655)
                      +.  .++.+.+.+.++ ++|-|...  +. .   ++.+++.+|.+|++|++|.                           
T Consensus       235 ~d--~d~~~~~~~~~dg~~~~v~~~--a~~~---~~~~~~~lk~~Gt~V~vg~---------------------------  280 (360)
T KOG0023|consen  235 ED--PDIMKAIMKTTDGGIDTVSNL--AEHA---LEPLLGLLKVNGTLVLVGL---------------------------  280 (360)
T ss_pred             CC--HHHHHHHHHhhcCcceeeeec--cccc---hHHHHHHhhcCCEEEEEeC---------------------------
Confidence            43  267777776653 45555443  33 5   8999999999999999992                           


Q ss_pred             eeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCC----------CcceEEEEEe
Q psy14589        242 FLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRI----------ENNYEFMVEC  311 (655)
Q Consensus       242 F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~----------~~~Y~FfVd~  311 (655)
                         ... +......+..-++.+|..+... ......++|+.+++++|+ ..||.-|...-          .-.|+|.||+
T Consensus       281 ---p~~-~~~~~~~~lil~~~~I~GS~vG-~~ket~E~Ldf~a~~~ik-~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  281 ---PEK-PLKLDTFPLILGRKSIKGSIVG-SRKETQEALDFVARGLIK-SPIELVKLSEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             ---cCC-cccccchhhhcccEEEEeeccc-cHHHHHHHHHHHHcCCCc-CceEEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence               122 1112234445568888888887 677899999999999999 47887775432          2368888887


Q ss_pred             c
Q psy14589        312 A  312 (655)
Q Consensus       312 e  312 (655)
                      .
T Consensus       355 s  355 (360)
T KOG0023|consen  355 S  355 (360)
T ss_pred             c
Confidence            5

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=99.78  E-value=4.2e-18  Score=182.65  Aligned_cols=171  Identities=12%  Similarity=0.048  Sum_probs=125.9

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCC--CCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNI--PQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIR  100 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~i--P~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~a  100 (655)
                      +....++|.+|..|..++|.+..+-....  ++..      .....+.+++.   ..++++++++ ++++.++++|||++
T Consensus        89 ~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~------G~~aey~~v~~~~~~~~P~~l~~~-~aa~~~~~~~a~~a  161 (343)
T PRK09880         89 PSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVD------GGFTRYKVVDTAQCIPYPEKADEK-VMAFAEPLAVAIHA  161 (343)
T ss_pred             CCCCCcCChhhcCCChhhCCCcceeecccccCCCC------CceeeeEEechHHeEECCCCCCHH-HHHhhcHHHHHHHH
Confidence            55667889999999888877644310000  0000      00111222322   1244566665 45677888999999


Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      +.+...  .+|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++||+.++|+++.   ++.+ +.+..+
T Consensus       162 l~~~~~--~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~---~~~~-~~~~~g  234 (343)
T PRK09880        162 AHQAGD--LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQND---DLDH-YKAEKG  234 (343)
T ss_pred             HHhcCC--CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcc---cHHH-HhccCC
Confidence            876544  48999999997 9999999999999999 69999999999999999999999998764   3433 322234


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+|+|++|++ .   ++.++++++++|+++.+|
T Consensus       235 ~~D~vid~~G~~~~---~~~~~~~l~~~G~iv~~G  266 (343)
T PRK09880        235 YFDVSFEVSGHPSS---INTCLEVTRAKGVMVQVG  266 (343)
T ss_pred             CCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence            699999999986 6   889999999999999998

>KOG0024|consensus

Probab=99.78  E-value=2.9e-18  Score=177.87  Aligned_cols=248  Identities=14%  Similarity=0.033  Sum_probs=177.0

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCC-CCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAED-NIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIR  100 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~-~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~a  100 (655)
                      -|-++...|+.|.+|+.+||.+++++.. -++|-      +   ..+.+.+.   ..+++++|++ .+|+.++++++|||
T Consensus        92 Epg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~------l---a~y~~~~~dfc~KLPd~vs~e-eGAl~ePLsV~~HA  161 (354)
T KOG0024|consen   92 EPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGT------L---AEYYVHPADFCYKLPDNVSFE-EGALIEPLSVGVHA  161 (354)
T ss_pred             cCCCccccchhhhCcccccCCccccccCCCcCCc------e---EEEEEechHheeeCCCCCchh-hcccccchhhhhhh
Confidence            4667888899999999999999998632 22221      1   11222332   3466777766 56788899999999


Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcC
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~  178 (655)
                      .+ ++++ +.|.+|||.|| |+||+.+...||++|| +|++++..+.|++.|+++||+.+.+..... .+++.+.+.+.-
T Consensus       162 cr-~~~v-k~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~  238 (354)
T KOG0024|consen  162 CR-RAGV-KKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKAL  238 (354)
T ss_pred             hh-hcCc-ccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence            85 6778 99999999999 9999999999999999 899999999999999999999988766532 234555555543


Q ss_pred             C--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCC
Q psy14589        179 S--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHS  255 (655)
Q Consensus       179 ~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~  255 (655)
                      +  .+|++|||+|.. +   ++.++.+++.+|++++++.                               ..+..+....
T Consensus       239 g~~~~d~~~dCsG~~~~---~~aai~a~r~gGt~vlvg~-------------------------------g~~~~~fpi~  284 (354)
T KOG0024|consen  239 GKKQPDVTFDCSGAEVT---IRAAIKATRSGGTVVLVGM-------------------------------GAEEIQFPII  284 (354)
T ss_pred             cccCCCeEEEccCchHH---HHHHHHHhccCCEEEEecc-------------------------------CCCccccChh
Confidence            2  599999999998 6   8999999999999999872                               2221111111


Q ss_pred             CCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC-cEEEe
Q psy14589        256 CPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS-YINII  334 (655)
Q Consensus       256 ~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~-~v~iL  334 (655)
                      ........+..+.+- .-+....+++++++++||+.++-+     ..  |.       .+...++.+.+..... .+|++
T Consensus       285 ~v~~kE~~~~g~fry-~~~~y~~ai~li~sGki~~k~lIT-----~r--~~-------~~~~~eAf~~~~~~~~~~iKv~  349 (354)
T KOG0024|consen  285 DVALKEVDLRGSFRY-CNGDYPTAIELVSSGKIDVKPLIT-----HR--YK-------FDDADEAFETLQHGEEGVIKVI  349 (354)
T ss_pred             hhhhheeeeeeeeee-ccccHHHHHHHHHcCCcCchhhee-----cc--cc-------cchHHHHHHHHHhCcCCceEEE
Confidence            122234555544443 335788999999999999975433     22  22       1345567777765543 45544

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.78  E-value=3.5e-18  Score=175.75  Aligned_cols=154  Identities=16%  Similarity=0.036  Sum_probs=128.8

Q ss_pred             CCCCCcccccccccccCCcEEee---cCCCC---C--CCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCch
Q psy14589         52 DNIPQLEDISKFLKDSTGFSLRP---VAGLL---S--SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGN  123 (655)
Q Consensus        52 ~~iP~le~V~~~l~~~~g~~~~~---v~~l~---~--~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgV  123 (655)
                      ++.|+++..+.+ ..+.||+-..   ..++.   +  .-.......+.+++.|||.+|.+.+.. ++||+|+|.||+|+|
T Consensus        86 S~~~~f~~GD~V-~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp-k~GetvvVSaAaGaV  163 (340)
T COG2130          86 SNHPGFQPGDIV-VGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP-KAGETVVVSAAAGAV  163 (340)
T ss_pred             cCCCCCCCCCEE-EecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC-CCCCEEEEEeccccc
Confidence            455555543322 3456888422   11221   1  112345678899999999999999999 999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHH
Q psy14589        124 GLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFA  201 (655)
Q Consensus       124 G~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~  201 (655)
                      |+.+.|+||.+|++|++++++++|.+++.+ +|.|.+|||+++   ++.+.+.+... |+|+.||+||++.   ++.++.
T Consensus       164 GsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~---d~~~~L~~a~P~GIDvyfeNVGg~v---~DAv~~  237 (340)
T COG2130         164 GSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE---DFAQALKEACPKGIDVYFENVGGEV---LDAVLP  237 (340)
T ss_pred             chHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc---cHHHHHHHHCCCCeEEEEEcCCchH---HHHHHH
Confidence            999999999999999999999999999987 999999999986   78888888754 9999999999999   999999


Q ss_pred             HhccccceEEEe
Q psy14589        202 DLAFNYKHFFFF  213 (655)
Q Consensus       202 ~l~~gGrlv~v~  213 (655)
                      .|+..||+++.|
T Consensus       238 ~ln~~aRi~~CG  249 (340)
T COG2130         238 LLNLFARIPVCG  249 (340)
T ss_pred             hhccccceeeee
Confidence            999999999998

>KOG1198|consensus

Probab=99.77  E-value=4e-18  Score=183.50  Aligned_cols=129  Identities=19%  Similarity=0.136  Sum_probs=115.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCC------CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKP------LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA  151 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~------~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a  151 (655)
                      .+..+++.+||++|+++.|||.++...+      .. ++|++|||+||+||||++++|+||+.|+.++++++++++.+++
T Consensus       120 ~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~-~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~  198 (347)
T KOG1198|consen  120 IPESLSFEEAAALPLAALTALSALFQLAPGKRSKKL-SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV  198 (347)
T ss_pred             CCCccChhhhhcCchHHHHHHHHHHhcccccccccc-CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH
Confidence            4467899999999999999999999988      88 8999999999999999999999999997666677889999999


Q ss_pred             HhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        152 YGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       152 ~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|||+++||++.   ++.+.+++.+ +++|+|+||+|+.+   ...++.+++.+|+...++
T Consensus       199 k~lGAd~vvdy~~~---~~~e~~kk~~~~~~DvVlD~vg~~~---~~~~~~~l~~~g~~~~i~  255 (347)
T KOG1198|consen  199 KKLGADEVVDYKDE---NVVELIKKYTGKGVDVVLDCVGGST---LTKSLSCLLKGGGGAYIG  255 (347)
T ss_pred             HHcCCcEeecCCCH---HHHHHHHhhcCCCccEEEECCCCCc---cccchhhhccCCceEEEE
Confidence            99999999999985   7888888864 48999999999987   788889999888876665

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=99.77  E-value=1.5e-17  Score=179.70  Aligned_cols=253  Identities=16%  Similarity=0.082  Sum_probs=170.5

Q ss_pred             cccccccccchhHhhhhhhHHHhCCCCC--CCCCCcccccccccccCCcEEeecCC---C-CCCCCHHhHhhhhhHHHHH
Q psy14589         24 LTKLYPTHACKEHNHVFPLLIQNCGYAE--DNIPQLEDISKFLKDSTGFSLRPVAG---L-LSSRDFLAGLAFRVFHSTQ   97 (655)
Q Consensus        24 ~~~~l~~~aC~~~~~G~~~l~~~~~y~~--~~iP~le~V~~~l~~~~g~~~~~v~~---l-~~~~s~~eAAal~~a~~TA   97 (655)
                      ..+.++.+.|.+|+.|..++|.+.++-.  ...++..+      ....|..+|...   . ++++ ..++|++.+++.|+
T Consensus        84 v~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G------~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~  156 (350)
T COG1063          84 VEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG------GFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATA  156 (350)
T ss_pred             ECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC------ceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhh
Confidence            3688999999999999988888554311  01111111      111122333211   1 2233 67899999999999


Q ss_pred             HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHH
Q psy14589         98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQIL  175 (655)
Q Consensus        98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~  175 (655)
                      +++....... +++++|+|.|+ |+||++++|+||.+|+ +||+++.+++|++.|++ .|++.+++....   +....+.
T Consensus       157 ~~~~a~~~~~-~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~---~~~~~~~  231 (350)
T COG1063         157 YHGHAERAAV-RPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED---DAGAEIL  231 (350)
T ss_pred             hhhhhhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc---cHHHHHH
Confidence            7774444444 46669999999 9999999999999998 88999999999999999 677777665542   4555666


Q ss_pred             hcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccC
Q psy14589        176 SYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSC  253 (655)
Q Consensus       176 ~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~  253 (655)
                      +.++  ++|+++||+|...  .+++++++++++|+++++|..                              ........
T Consensus       232 ~~t~g~g~D~vie~~G~~~--~~~~ai~~~r~gG~v~~vGv~------------------------------~~~~~~~~  279 (350)
T COG1063         232 ELTGGRGADVVIEAVGSPP--ALDQALEALRPGGTVVVVGVY------------------------------GGEDIPLP  279 (350)
T ss_pred             HHhCCCCCCEEEECCCCHH--HHHHHHHHhcCCCEEEEEecc------------------------------CCccCccC
Confidence            6654  6999999999762  389999999999999999831                              01000000


Q ss_pred             CCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC-cEE
Q psy14589        254 HSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS-YIN  332 (655)
Q Consensus       254 ~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~-~v~  332 (655)
                      ......+..++..+..+.......+++++++++++++..+-++...              .++..++++.+...-. .+|
T Consensus       280 ~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~--------------~~~~~~a~~~~~~~~~~~~K  345 (350)
T COG1063         280 AGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLP--------------LDDAAEAYELFADRKEEAIK  345 (350)
T ss_pred             HHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeecc--------------HHHHHHHHHHHHhcCCCeEE
Confidence            0011123566666644214457888999999999999877554433              1355677777775433 455


Q ss_pred             Ee
Q psy14589        333 II  334 (655)
Q Consensus       333 iL  334 (655)
                      ++
T Consensus       346 v~  347 (350)
T COG1063         346 VV  347 (350)
T ss_pred             EE
Confidence            54

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=99.77  E-value=7.3e-18  Score=182.78  Aligned_cols=178  Identities=13%  Similarity=-0.022  Sum_probs=135.9

Q ss_pred             cccccchhHhhhhhhHHHhCCCCCC---CCCCc-----cccccc-ccccCCcE---EeecC---CCCCCCCHHhHhhhhh
Q psy14589         28 YPTHACKEHNHVFPLLIQNCGYAED---NIPQL-----EDISKF-LKDSTGFS---LRPVA---GLLSSRDFLAGLAFRV   92 (655)
Q Consensus        28 l~~~aC~~~~~G~~~l~~~~~y~~~---~iP~l-----e~V~~~-l~~~~g~~---~~~v~---~l~~~~s~~eAAal~~   92 (655)
                      ...+.|..|..|..++|.+......   ..++-     ...... .....+|+   +++..   .++++++++++|++++
T Consensus        95 ~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~  174 (371)
T cd08281          95 PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGC  174 (371)
T ss_pred             CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcc
Confidence            4577899999999888876532100   00000     000000 00012333   33332   2456788999999999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHH
Q psy14589         93 FHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA  171 (655)
Q Consensus        93 a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~  171 (655)
                      +.+|||+++.+...+ ++|++|+|.|+ |++|++++|+||++|+ +|++++++++|++.++++||++++++.+.   ++.
T Consensus       175 ~~~ta~~~~~~~~~i-~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~---~~~  249 (371)
T cd08281         175 AVLTGVGAVVNTAGV-RPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDP---NAV  249 (371)
T ss_pred             hHHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCch---hHH
Confidence            999999998777888 89999999996 9999999999999999 69999999999999999999999998764   567


Q ss_pred             HHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        172 NQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       172 ~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+++.++ ++|+|+|++|+. .   ++.++++++++|+++.+|
T Consensus       250 ~~i~~~~~~g~d~vid~~G~~~~---~~~~~~~l~~~G~iv~~G  290 (371)
T cd08281         250 EQVRELTGGGVDYAFEMAGSVPA---LETAYEITRRGGTTVTAG  290 (371)
T ss_pred             HHHHHHhCCCCCEEEECCCChHH---HHHHHHHHhcCCEEEEEc
Confidence            77776654 799999999976 6   889999999999999988

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=99.76  E-value=1.7e-17  Score=180.74  Aligned_cols=237  Identities=16%  Similarity=0.067  Sum_probs=161.5

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCCC--CCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhc
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAEDN--IPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPS  103 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~~--iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~  103 (655)
                      ..+.|.+|+.|..++|.+..+....  ..+..    .-.....+.+++.   ..++++++++++|++++++.|+|+++..
T Consensus        96 ~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~----~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~  171 (375)
T PLN02178         96 SCQSCESCNQDLENYCPKVVFTYNSRSSDGTR----NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKY  171 (375)
T ss_pred             CCCCChhHhCcchhcCCCccccccccccCCCc----CCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHH
Confidence            3788999999998888775532100  00110    0011112223332   2356788999999999999999999865


Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKAYGLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .....++|++|+|.|+ |++|++++|+||++|++|++++.++++ .+.++++|++++||+.+.      +.+.+.++++|
T Consensus       172 ~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~------~~v~~~~~~~D  244 (375)
T PLN02178        172 YGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS------QKMKEAVGTMD  244 (375)
T ss_pred             hCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH------HHHHHhhCCCc
Confidence            5432158999999987 999999999999999999998877554 677889999999987642      23333334799


Q ss_pred             EEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCe
Q psy14589        183 ADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLF  261 (655)
Q Consensus       183 vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~k  261 (655)
                      +|+|++|++ .   ++.++++++++|+++.+|..                              ..+. .........+.
T Consensus       245 ~vid~~G~~~~---~~~~~~~l~~~G~iv~vG~~------------------------------~~~~-~~~~~~~~~~~  290 (375)
T PLN02178        245 FIIDTVSAEHA---LLPLFSLLKVSGKLVALGLP------------------------------EKPL-DLPIFPLVLGR  290 (375)
T ss_pred             EEEECCCcHHH---HHHHHHhhcCCCEEEEEccC------------------------------CCCC-ccCHHHHHhCC
Confidence            999999987 6   89999999999999999820                              0000 00000011123


Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      .++..+... ....+.++++.+++++|++. |++.|+                +++.++++.+++..
T Consensus       291 ~~i~g~~~~-~~~~~~~~~~l~~~g~i~~~-i~~~~l----------------~~~~~A~~~~~~~~  339 (375)
T PLN02178        291 KMVGGSQIG-GMKETQEMLEFCAKHKIVSD-IELIKM----------------SDINSAMDRLAKSD  339 (375)
T ss_pred             eEEEEeCcc-CHHHHHHHHHHHHhCCCccc-EEEEeH----------------HHHHHHHHHHHcCC
Confidence            456655544 45678999999999998853 332221                45677888876553

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=99.76  E-value=1.5e-17  Score=180.01  Aligned_cols=238  Identities=16%  Similarity=0.097  Sum_probs=158.7

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhcCC
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPSKP  105 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~~~  105 (655)
                      ..+.|.+|..|..++|++..+.....+. .+.. .-.....+.+++.   ..++++++++++|++++++.|+|+++.+..
T Consensus       102 ~Cg~C~~C~~g~~~~C~~~~~~~~~~~~-~g~~-~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~  179 (360)
T PLN02586        102 SCKSCESCDQDLENYCPKMIFTYNSIGH-DGTK-NYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYG  179 (360)
T ss_pred             cCCCCccccCCCcccCCCcccccccccc-CCCc-CCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhc
Confidence            5788999999988888765431110000 0000 0011122233332   234567899999999999999999987666


Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AKAYGLGADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      .+ ++|++|+|.|+ |+||++++|+||++|++|++++.+++++ +.++++||+.++|+.+.      +.+++.++++|+|
T Consensus       180 ~~-~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~------~~~~~~~~~~D~v  251 (360)
T PLN02586        180 MT-EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP------EKMKAAIGTMDYI  251 (360)
T ss_pred             cc-CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH------HHHHhhcCCCCEE
Confidence            66 79999999887 9999999999999999998887776654 45679999999987652      2333344479999


Q ss_pred             EeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeEE
Q psy14589        185 HPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDF  263 (655)
Q Consensus       185 ~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~kts  263 (655)
                      +|++|+. +   ++.++++++++|+++.+|..                              ..+. .........+...
T Consensus       252 id~~g~~~~---~~~~~~~l~~~G~iv~vG~~------------------------------~~~~-~~~~~~~~~~~~~  297 (360)
T PLN02586        252 IDTVSAVHA---LGPLLGLLKVNGKLITLGLP------------------------------EKPL-ELPIFPLVLGRKL  297 (360)
T ss_pred             EECCCCHHH---HHHHHHHhcCCcEEEEeCCC------------------------------CCCC-ccCHHHHHhCCeE
Confidence            9999975 6   88999999999999999820                              0000 0000000112334


Q ss_pred             EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      +..+... ....+.++++.+++++|++. ++..|                -+++.++++.+++.-
T Consensus       298 i~g~~~~-~~~~~~~~~~li~~g~i~~~-~~~~~----------------l~~~~~A~~~~~~~~  344 (360)
T PLN02586        298 VGGSDIG-GIKETQEMLDFCAKHNITAD-IELIR----------------MDEINTAMERLAKSD  344 (360)
T ss_pred             EEEcCcC-CHHHHHHHHHHHHhCCCCCc-EEEEe----------------HHHHHHHHHHHHcCC
Confidence            4444333 34578999999999998842 22222                145677888876553

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=99.76  E-value=2e-17  Score=177.90  Aligned_cols=173  Identities=14%  Similarity=0.093  Sum_probs=129.8

Q ss_pred             ccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCC------CCCHHhHhhhhhHHHHH
Q psy14589         27 LYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLS------SRDFLAGLAFRVFHSTQ   97 (655)
Q Consensus        27 ~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~------~~s~~eAAal~~a~~TA   97 (655)
                      ....+.|..|..|..++|....+......         .....+..++..   .+++      +++++++++++++..|+
T Consensus        85 ~~~cg~c~~c~~g~~~~c~~~~~~g~~~~---------G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta  155 (349)
T TIGR03201        85 VIPCGECELCKTGRGTICRAQKMPGNDMQ---------GGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP  155 (349)
T ss_pred             CCCCCCChhhhCcCcccCCCCCccCcCCC---------CcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence            44567788888887777655433110000         001111122211   1233      57788899999999999


Q ss_pred             HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589         98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus        98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      |+++.. ..+ ++|++|+|+|+ |++|++++|+||++|++|++++++++|++.++++|++.+||+.+.+.+++.+.+++.
T Consensus       156 ~~a~~~-~~~-~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~  232 (349)
T TIGR03201       156 YQAAVQ-AGL-KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAF  232 (349)
T ss_pred             HHHHHh-cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhh
Confidence            999864 667 89999999999 999999999999999999999999999999999999999997653223566677766


Q ss_pred             CC--Cee----EEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        178 GS--ELD----ADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~--gvD----vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++  ++|    +|+||+|+..  .++.++++++++|+++++|
T Consensus       233 t~~~g~d~~~d~v~d~~g~~~--~~~~~~~~l~~~G~iv~~G  272 (349)
T TIGR03201       233 AKARGLRSTGWKIFECSGSKP--GQESALSLLSHGGTLVVVG  272 (349)
T ss_pred             cccCCCCCCcCEEEECCCChH--HHHHHHHHHhcCCeEEEEC
Confidence            53  665    8999999873  2778999999999999998

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=99.75  E-value=1.9e-17  Score=176.57  Aligned_cols=168  Identities=21%  Similarity=0.195  Sum_probs=130.1

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eeec---CCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPV---AGLLSSRDFLAGLAFRVFHSTQYI   99 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v---~~l~~~~s~~eAAal~~a~~TA~~   99 (655)
                      +....+.|..|..|..++|.+..+.    .+.       ...++|+   .++.   ..+++++++++++++++++.|||+
T Consensus        86 ~~~~c~~c~~c~~g~~~~c~~~~~~----~g~-------~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  154 (339)
T cd08239          86 HYVGCGACRNCRRGWMQLCTSKRAA----YGW-------NRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH  154 (339)
T ss_pred             CCCCCCCChhhhCcCcccCcCcccc----ccc-------CCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            4456678888988887777554320    000       0112232   2322   224567889999999999999999


Q ss_pred             HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ++.. ..+ ++|++|+|+|+ |++|++++|+||++|++ |++++++++|++.++++|++.++|+.+.   + .+.+.+.+
T Consensus       155 ~l~~-~~~-~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~---~-~~~~~~~~  227 (339)
T cd08239         155 ALRR-VGV-SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQD---D-VQEIRELT  227 (339)
T ss_pred             HHHh-cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcc---h-HHHHHHHh
Confidence            9854 566 78999999987 99999999999999998 9999999999999999999999998763   4 55555543


Q ss_pred             C--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        179 S--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +  ++|+|+|++|+..  .++.++++++++|+++.+|
T Consensus       228 ~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g  262 (339)
T cd08239         228 SGAGADVAIECSGNTA--ARRLALEAVRPWGRLVLVG  262 (339)
T ss_pred             CCCCCCEEEECCCCHH--HHHHHHHHhhcCCEEEEEc
Confidence            2  7999999999884  1588999999999999988

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=99.75  E-value=3e-17  Score=178.08  Aligned_cols=182  Identities=16%  Similarity=0.032  Sum_probs=134.6

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCC---CCCCCcccccc------cccccCCcE---EeecC---CCCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAE---DNIPQLEDISK------FLKDSTGFS---LRPVA---GLLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~---~~iP~le~V~~------~l~~~~g~~---~~~v~---~l~~~~s~~eAAal   90 (655)
                      +....+.|.+|..|..++|.+...-.   ...++......      ......+|+   ++|..   .++++++++++|++
T Consensus        87 ~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l  166 (368)
T TIGR02818        87 YTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLL  166 (368)
T ss_pred             CCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhh
Confidence            34467899999999888876532100   00000000000      000012333   33332   24567899999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      +++..|||+++.+.+.+ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||+.++|+.+.. ++
T Consensus       167 ~~~~~ta~~a~~~~~~~-~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~-~~  243 (368)
T TIGR02818       167 GCGVTTGIGAVLNTAKV-EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD-KP  243 (368)
T ss_pred             cchhHHHHHHHHHhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccc-hh
Confidence            99999999998777788 89999999987 9999999999999999 799999999999999999999999976421 14


Q ss_pred             HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+++.++ ++|+++|++|++ .   +..++++++++ |+++.+|
T Consensus       244 ~~~~v~~~~~~g~d~vid~~G~~~~---~~~~~~~~~~~~G~~v~~g  287 (368)
T TIGR02818       244 IQEVIVEITDGGVDYSFECIGNVNV---MRAALECCHKGWGESIIIG  287 (368)
T ss_pred             HHHHHHHHhCCCCCEEEECCCCHHH---HHHHHHHhhcCCCeEEEEe
Confidence            5566666543 899999999976 5   88999999986 9999998

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.75  E-value=1.8e-17  Score=172.88  Aligned_cols=173  Identities=14%  Similarity=0.073  Sum_probs=129.5

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---EeecC----CCCCCCCHHhHhhhhhHHHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPVA----GLLSSRDFLAGLAFRVFHSTQ   97 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v~----~l~~~~s~~eAAal~~a~~TA   97 (655)
                      .+..+.+.|.+|..|..++|.+..+-     +......-.....+|+   .+|..    .++++++++++++++++..|+
T Consensus        35 ~~~~~cg~C~~C~~g~~~~C~~~~~~-----g~~~~~~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta  109 (280)
T TIGR03366        35 SVTVPCGRCFRCRRGLPQKCDSLRKY-----GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV  109 (280)
T ss_pred             cCCCCCCCChhhhCcCcccCCChhhc-----CcccccCCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHH
Confidence            34567899999999988887664431     1000000000112222   33322    245678899999999999999


Q ss_pred             HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589         98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus        98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      |+++.+.. . .+|++|+|+|+ |++|++++|+||++|++ |++++++++|++.++++|++.++++..     ..+.+.+
T Consensus       110 ~~al~~~~-~-~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~  181 (280)
T TIGR03366       110 MAALEAAG-D-LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGG  181 (280)
T ss_pred             HHHHHhcc-C-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHH
Confidence            99986544 4 58999999998 99999999999999996 888988999999999999999998653     2334444


Q ss_pred             cC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+  .++|+++|++|++ .   ++.++++++++|+++.+|
T Consensus       182 ~~~~~g~d~vid~~G~~~~---~~~~~~~l~~~G~iv~~G  218 (280)
T TIGR03366       182 LQNGRGVDVALEFSGATAA---VRACLESLDVGGTAVLAG  218 (280)
T ss_pred             HhCCCCCCEEEECCCChHH---HHHHHHHhcCCCEEEEec
Confidence            43  3799999999976 5   889999999999999998

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=99.75  E-value=1.6e-17  Score=176.38  Aligned_cols=129  Identities=12%  Similarity=0.016  Sum_probs=114.0

Q ss_pred             CCCCCHHhH-hhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         79 LSSRDFLAG-LAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        79 ~~~~s~~eA-Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++ +++++++.|||+++.+.+.+ ++|++|+|+|++|+||++++|+||++|++|++++++++|.+.++++|++
T Consensus       107 p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~-~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~  185 (325)
T TIGR02825       107 PDTLPLSLALGTVGMPGLTAYFGLLEICGV-KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFD  185 (325)
T ss_pred             cCCCCHHHHHHhcccHHHHHHHHHHHHhCC-CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            456788887 68999999999998888888 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+.+.+  ++.+.++..++ ++|+++|++|++.   ++.++++++++|+++.+|
T Consensus       186 ~vi~~~~~~--~~~~~~~~~~~~gvdvv~d~~G~~~---~~~~~~~l~~~G~iv~~G  237 (325)
T TIGR02825       186 VAFNYKTVK--SLEETLKKASPDGYDCYFDNVGGEF---SNTVIGQMKKFGRIAICG  237 (325)
T ss_pred             EEEeccccc--cHHHHHHHhCCCCeEEEEECCCHHH---HHHHHHHhCcCcEEEEec
Confidence            999987531  35555555443 8999999999887   899999999999999987

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-17  Score=178.46  Aligned_cols=129  Identities=14%  Similarity=0.037  Sum_probs=113.8

Q ss_pred             CCCCCHH-hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCC
Q psy14589         79 LSSRDFL-AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGA  156 (655)
Q Consensus        79 ~~~~s~~-eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGA  156 (655)
                      +++++++ ++|+++++++|||+++.+.+.+ ++|++|+|+|++|+||++++|+||++|++|++++++++|++.++ ++|+
T Consensus       127 P~~~~~~~~aa~l~~~~~TA~~al~~~~~~-~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa  205 (348)
T PLN03154        127 QDDIPLSYHLGLLGMAGFTAYAGFYEVCSP-KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF  205 (348)
T ss_pred             cCCCCHHHHHHHcccHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC
Confidence            4567776 6889999999999999877888 89999999999999999999999999999999999999999987 7999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++|+.+.  +++.+.+++.++ ++|+++|++|+..   +..++++++++|+++++|
T Consensus       206 ~~vi~~~~~--~~~~~~i~~~~~~gvD~v~d~vG~~~---~~~~~~~l~~~G~iv~~G  258 (348)
T PLN03154        206 DEAFNYKEE--PDLDAALKRYFPEGIDIYFDNVGGDM---LDAALLNMKIHGRIAVCG  258 (348)
T ss_pred             CEEEECCCc--ccHHHHHHHHCCCCcEEEEECCCHHH---HHHHHHHhccCCEEEEEC
Confidence            999998742  146666666544 8999999999887   899999999999999998

>PLN02740 Alcohol dehydrogenase-like

Probab=99.74  E-value=4.1e-17  Score=177.76  Aligned_cols=182  Identities=12%  Similarity=0.035  Sum_probs=136.8

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCc-cccccc-----------ccccCCcE---EeecC---CCCCCCCHHhH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQL-EDISKF-----------LKDSTGFS---LRPVA---GLLSSRDFLAG   87 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~l-e~V~~~-----------l~~~~g~~---~~~v~---~l~~~~s~~eA   87 (655)
                      +....+.|.+|..|..++|++..+........ .....+           ....++|+   .++..   .++++++.+++
T Consensus        97 ~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  176 (381)
T PLN02740         97 FNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKM  176 (381)
T ss_pred             CCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHh
Confidence            45677889999999888888765321100000 000000           00012333   23322   24567889999


Q ss_pred             hhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccc
Q psy14589         88 LAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRE  166 (655)
Q Consensus        88 Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~  166 (655)
                      |+++++..|||+++.+.+.+ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||+.++|+.+..
T Consensus       177 a~l~~~~~ta~~~~~~~~~~-~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~  254 (381)
T PLN02740        177 SLLSCGVSTGVGAAWNTANV-QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSD  254 (381)
T ss_pred             hhhcccchhhHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEeccccc
Confidence            99999999999998777888 89999999997 9999999999999999 699999999999999999999999977521


Q ss_pred             hhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        167 LDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       167 ~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                       +++.+.+++.++ ++|+|+|++|++ .   ++.++++++++ |+++++|
T Consensus       255 -~~~~~~v~~~~~~g~dvvid~~G~~~~---~~~a~~~~~~g~G~~v~~G  300 (381)
T PLN02740        255 -KPVHERIREMTGGGVDYSFECAGNVEV---LREAFLSTHDGWGLTVLLG  300 (381)
T ss_pred             -chHHHHHHHHhCCCCCEEEECCCChHH---HHHHHHhhhcCCCEEEEEc
Confidence             136666666544 799999999986 6   89999999997 9999998

>PLN02827 Alcohol dehydrogenase-like

Probab=99.73  E-value=1.7e-16  Score=173.06  Aligned_cols=182  Identities=9%  Similarity=0.017  Sum_probs=135.0

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCC------CCcc--c--cccc--ccccCCcEEeecC---CCCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNI------PQLE--D--ISKF--LKDSTGFSLRPVA---GLLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~i------P~le--~--V~~~--l~~~~g~~~~~v~---~l~~~~s~~eAAal   90 (655)
                      +....+.|.+|+.|..++|+++++....+      +.+.  +  ....  ......+..++..   .+++++++++++++
T Consensus        95 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l  174 (378)
T PLN02827         95 FTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLL  174 (378)
T ss_pred             cCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhh
Confidence            35567899999999988887754321110      0000  0  0000  0011122233332   24567888899999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      +++..|+|+++.+.+.+ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++|++++||+.+.. ++
T Consensus       175 ~~~~~~a~~~~~~~~~~-~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~-~~  251 (378)
T PLN02827        175 SCGVAAGLGAAWNVADV-SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLS-EP  251 (378)
T ss_pred             cchhHhhHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccc-hH
Confidence            99999999987666777 89999999997 9999999999999999 588888899999999999999999986521 14


Q ss_pred             HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+++.++ ++|+|+|++|+. .   +..++++++++ |+++.+|
T Consensus       252 ~~~~v~~~~~~g~d~vid~~G~~~~---~~~~l~~l~~g~G~iv~~G  295 (378)
T PLN02827        252 IQQVIKRMTGGGADYSFECVGDTGI---ATTALQSCSDGWGLTVTLG  295 (378)
T ss_pred             HHHHHHHHhCCCCCEEEECCCChHH---HHHHHHhhccCCCEEEEEC
Confidence            5666666544 799999999986 6   88999999998 9999988

>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]

Probab=99.72  E-value=1.5e-17  Score=171.72  Aligned_cols=94  Identities=27%  Similarity=0.328  Sum_probs=83.7

Q ss_pred             hhheeecccc-ccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---C
Q psy14589        239 FFYFLLLSQP-LIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---G  314 (655)
Q Consensus       239 ~~~F~ll~~p-~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~  314 (655)
                      +|+|+++++. +..   ......|||++|+++| +||+|.++|..|+.+|||||+|||||+++.+|+|.||||++|   +
T Consensus       174 ~TRF~vl~r~~~~~---~~~~~~kTsl~f~~~n-~PGaL~~~L~~Fa~~gINlTkIESRP~k~~~~~Y~F~iD~eg~~~~  249 (279)
T COG0077         174 RTRFLVLSRRKPPS---VSDGPEKTSLIFSVPN-KPGALYKALGVFAKRGINLTKIESRPLKTGLGEYLFFIDIEGHIDD  249 (279)
T ss_pred             eEEEEEEeccCCCC---cCCCCceEEEEEEcCC-CCchHHHHHHHHHHcCcceeeEeecccCCCCeeEEEEEEEecCcCc
Confidence            5799999963 211   1113359999999997 999999999999999999999999999999999999999999   7


Q ss_pred             chHHHHHHHHHccCCcEEEecC
Q psy14589        315 GDLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       315 ~~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      +.++++|++|++.+..+|+||+
T Consensus       250 ~~v~~AL~el~~~t~~~kilGs  271 (279)
T COG0077         250 PLVKEALEELKEITEFVKILGS  271 (279)
T ss_pred             HhHHHHHHHHHhheeEEEEEee
Confidence            7999999999999999999999

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=99.72  E-value=5.6e-17  Score=174.94  Aligned_cols=179  Identities=14%  Similarity=0.012  Sum_probs=134.5

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcc-ccc--c-c-ccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLE-DIS--K-F-LKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQ   97 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le-~V~--~-~-l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA   97 (655)
                      +....+.|..|..|..++|......... ..+. +..  . . ......+..++..   .++++++++++++++++..||
T Consensus        86 ~~~~cg~c~~c~~g~~~~c~~~~~~~~~-~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta  164 (358)
T TIGR03451        86 WRAVCGQCRACKRGRPWYCFDTHNATQK-MTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAG  164 (358)
T ss_pred             cCCCCCCChHHhCcCcccCcCccccccc-cccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhh
Confidence            4556788999999977666543211000 0000 000  0 0 0111122233322   245677888999999999999


Q ss_pred             HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589         98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus        98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      |+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|++.++|+.+.   ++.+.+.+
T Consensus       165 ~~~~~~~~~~-~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~---~~~~~i~~  239 (358)
T TIGR03451       165 LGAAVNTGGV-KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT---DPVEAIRA  239 (358)
T ss_pred             HHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCc---CHHHHHHH
Confidence            9988777888 89999999986 9999999999999999 59999999999999999999999998764   56677776


Q ss_pred             cCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++  ++|+|+|++|++ +   ++.++++++++|+++.+|
T Consensus       240 ~~~~~g~d~vid~~g~~~~---~~~~~~~~~~~G~iv~~G  276 (358)
T TIGR03451       240 LTGGFGADVVIDAVGRPET---YKQAFYARDLAGTVVLVG  276 (358)
T ss_pred             HhCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEC
Confidence            643  799999999975 6   889999999999999998

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=99.71  E-value=4.4e-16  Score=168.57  Aligned_cols=182  Identities=13%  Similarity=0.024  Sum_probs=133.7

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCC-ccccccc-------ccccCCcE---Eeec---CCCCCCCCHHhHhhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQ-LEDISKF-------LKDSTGFS---LRPV---AGLLSSRDFLAGLAFR   91 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~-le~V~~~-------l~~~~g~~---~~~v---~~l~~~~s~~eAAal~   91 (655)
                      +....+.|..|..|.+++|++..+-...+.. .-.....       .....+|+   .++.   ..++++++++++++++
T Consensus        87 ~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~  166 (365)
T cd08277          87 FIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLG  166 (365)
T ss_pred             CCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhc
Confidence            4456788999999988888765431111100 0000000       00012333   2332   2245678899999999


Q ss_pred             hHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHH
Q psy14589         92 VFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRF  170 (655)
Q Consensus        92 ~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~  170 (655)
                      +++.|||+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|+++++++.+.. .++
T Consensus       167 ~~~~ta~~~~~~~~~~-~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~  243 (365)
T cd08277         167 CGFSTGYGAAWNTAKV-EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSD-KPV  243 (365)
T ss_pred             chhHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccccc-chH
Confidence            9999999998777788 89999999986 9999999999999999 799999999999999999999999876521 134


Q ss_pred             HHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        171 ANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       171 ~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      .+.+++.+ +++|+|+|++|+. .   +..++++++++ |+++.+|
T Consensus       244 ~~~~~~~~~~g~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g  286 (365)
T cd08277         244 SEVIREMTGGGVDYSFECTGNADL---MNEALESTKLGWGVSVVVG  286 (365)
T ss_pred             HHHHHHHhCCCCCEEEECCCChHH---HHHHHHhcccCCCEEEEEc
Confidence            55565554 3799999999975 5   78999999885 9999998

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=99.71  E-value=1.6e-16  Score=169.98  Aligned_cols=158  Identities=16%  Similarity=0.016  Sum_probs=122.2

Q ss_pred             cccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhcCCC
Q psy14589         30 THACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPL  106 (655)
Q Consensus        30 ~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~  106 (655)
                      ...|..|..|.+++|.+..+.     +...    -.....+..++.   ..++++++++++++++++..|||+++. .+.
T Consensus        93 c~~c~~c~~g~~~~c~~~~~~-----g~~~----~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~-~~~  162 (329)
T TIGR02822        93 CGVCRYCRRGAENLCPASRYT-----GWDT----DGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL-RAS  162 (329)
T ss_pred             CCCChHHhCcCcccCCCcccC-----Cccc----CCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH-hcC
Confidence            467888888887777665431     1100    000111222332   224567889999999999999999986 467


Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        107 YTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       107 l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      + ++|++|+|+|+ |++|++++|+||++|++|++++++++|++.++++||++++|+.+.   +        .+++|++++
T Consensus       163 ~-~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~---~--------~~~~d~~i~  229 (329)
T TIGR02822       163 L-PPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDT---P--------PEPLDAAIL  229 (329)
T ss_pred             C-CCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceecccccc---C--------cccceEEEE
Confidence            7 89999999998 999999999999999999999999999999999999999986431   1        125788888


Q ss_pred             CCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        187 GFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       187 ~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.|.. .   +..++++++++|+++++|
T Consensus       230 ~~~~~~~---~~~~~~~l~~~G~~v~~G  254 (329)
T TIGR02822       230 FAPAGGL---VPPALEALDRGGVLAVAG  254 (329)
T ss_pred             CCCcHHH---HHHHHHhhCCCcEEEEEe
Confidence            87765 5   899999999999999998

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=99.71  E-value=9.6e-17  Score=171.38  Aligned_cols=127  Identities=14%  Similarity=0.034  Sum_probs=112.7

Q ss_pred             CCCHH-hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcE
Q psy14589         81 SRDFL-AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADY  158 (655)
Q Consensus        81 ~~s~~-eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~  158 (655)
                      ++++. ++|++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|++++++++|.+.+++ +|+++
T Consensus       122 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~  200 (338)
T cd08295         122 DVPLSYYLGLLGMPGLTAYAGFYEVCKP-KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD  200 (338)
T ss_pred             CCCHHHHHHhcccHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce
Confidence            46665 7999999999999999887888 899999999999999999999999999999999999999999998 99999


Q ss_pred             EEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        159 VVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       159 vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+.+.  +++.+.+++.+ +++|+++|++|+..   +..++++++++|+++.+|
T Consensus       201 vi~~~~~--~~~~~~i~~~~~~gvd~v~d~~g~~~---~~~~~~~l~~~G~iv~~G  251 (338)
T cd08295         201 AFNYKEE--PDLDAALKRYFPNGIDIYFDNVGGKM---LDAVLLNMNLHGRIAACG  251 (338)
T ss_pred             eEEcCCc--ccHHHHHHHhCCCCcEEEEECCCHHH---HHHHHHHhccCcEEEEec
Confidence            9997642  14666666654 38999999999877   899999999999999987

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=99.71  E-value=9.3e-17  Score=168.07  Aligned_cols=244  Identities=14%  Similarity=0.078  Sum_probs=178.3

Q ss_pred             ccccchhHhhhhhhHHHhCCCC------CCCCCCcc----ccccccc--ccCCcEEeec---CCCCCCCCHHhHhhhhhH
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYA------EDNIPQLE----DISKFLK--DSTGFSLRPV---AGLLSSRDFLAGLAFRVF   93 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~------~~~iP~le----~V~~~l~--~~~g~~~~~v---~~l~~~~s~~eAAal~~a   93 (655)
                      ..++|..|+.|..+||....-.      ++.-..+.    .+..++.  .-..|.+++-   -.+.++.+++.++-+.|.
T Consensus        90 ~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCg  169 (366)
T COG1062          90 ECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCG  169 (366)
T ss_pred             CCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeee
Confidence            6789999999999888853321      11111111    1112222  1122334332   234567789999999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHH
Q psy14589         94 HSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFAN  172 (655)
Q Consensus        94 ~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~  172 (655)
                      ..|.+-+..+.+++ ++|++|.|.|. ||||++++|-|++.|| ++|+++.+++|+++++++||++++|..+.  .++.+
T Consensus       170 V~TG~Gav~nta~v-~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~--~~vv~  245 (366)
T COG1062         170 VTTGIGAVVNTAKV-EPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEV--DDVVE  245 (366)
T ss_pred             eccChHHhhhcccC-CCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhh--hhHHH
Confidence            99999999999999 99999999999 9999999999999999 89999999999999999999999998764  25888


Q ss_pred             HHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeecccccc
Q psy14589        173 QILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLI  250 (655)
Q Consensus       173 ~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~  250 (655)
                      .+.+.++ |+|.+|||+|+. .   ++++++++.++|+.+++|.                               ..+..
T Consensus       246 ~i~~~T~gG~d~~~e~~G~~~~---~~~al~~~~~~G~~v~iGv-------------------------------~~~~~  291 (366)
T COG1062         246 AIVELTDGGADYAFECVGNVEV---MRQALEATHRGGTSVIIGV-------------------------------AGAGQ  291 (366)
T ss_pred             HHHHhcCCCCCEEEEccCCHHH---HHHHHHHHhcCCeEEEEec-------------------------------CCCCc
Confidence            8888887 999999999987 6   9999999999999999983                               12111


Q ss_pred             ccC--CCCCCCC---eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHH
Q psy14589        251 QSC--HSCPFSL---FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLR  325 (655)
Q Consensus       251 ~~~--~~~~~~~---ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~  325 (655)
                      ...  .....++   +-|.....+.  ...+-+++++..++++++.++-|.-.+              -++++++.+.|+
T Consensus       292 ~i~~~~~~lv~gr~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~--------------Le~INeaf~~m~  355 (366)
T COG1062         292 EISTRPFQLVTGRVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIP--------------LEDINEAFDLMH  355 (366)
T ss_pred             eeecChHHeeccceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhcccc--------------HHHHHHHHHHHh
Confidence            100  1111223   2233333333  347889999999999999887653222              245667777776


Q ss_pred             c
Q psy14589        326 S  326 (655)
Q Consensus       326 ~  326 (655)
                      +
T Consensus       356 ~  356 (366)
T COG1062         356 E  356 (366)
T ss_pred             C
Confidence            4

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.70  E-value=1.4e-16  Score=168.22  Aligned_cols=122  Identities=16%  Similarity=0.052  Sum_probs=109.8

Q ss_pred             HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCc
Q psy14589         85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTI  164 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~  164 (655)
                      .++++++++++|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|+++++|+.+
T Consensus       119 ~~~a~~~~~~~ta~~al~~~~~~-~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~  197 (329)
T cd08294         119 LALGVLGMPGLTAYFGLLEICKP-KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKT  197 (329)
T ss_pred             HHHHhcccHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC
Confidence            33457899999999999878888 89999999999999999999999999999999999999999999999999999886


Q ss_pred             cchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        165 RELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       165 ~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .   ++.+.+++.++ ++|+|+|++|++.   +..++++++++|+++.+|
T Consensus       198 ~---~~~~~v~~~~~~gvd~vld~~g~~~---~~~~~~~l~~~G~iv~~g  241 (329)
T cd08294         198 V---SLEEALKEAAPDGIDCYFDNVGGEF---SSTVLSHMNDFGRVAVCG  241 (329)
T ss_pred             c---cHHHHHHHHCCCCcEEEEECCCHHH---HHHHHHhhccCCEEEEEc
Confidence            4   56677766643 8999999999887   899999999999999987

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=99.70  E-value=4.3e-16  Score=168.67  Aligned_cols=180  Identities=12%  Similarity=0.010  Sum_probs=135.4

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCC-CC-----------CCcccccccccccCCcE---Eeec---CCCCCCCCHHhH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAED-NI-----------PQLEDISKFLKDSTGFS---LRPV---AGLLSSRDFLAG   87 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~-~i-----------P~le~V~~~l~~~~g~~---~~~v---~~l~~~~s~~eA   87 (655)
                      +....+.|..|..|..++|.+.++... ..           ++... .. .....+|+   +++.   ..++++++++++
T Consensus        88 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~-~~-~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  165 (369)
T cd08301          88 FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPI-YH-FVGTSTFSEYTVVHVGCVAKINPEAPLDKV  165 (369)
T ss_pred             cCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcce-ee-eeccccceeEEEEecccEEECCCCCCHHHh
Confidence            456778899999998888876543200 00           00000 00 00112333   3332   234567889999


Q ss_pred             hhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccc
Q psy14589         88 LAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRE  166 (655)
Q Consensus        88 Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~  166 (655)
                      |+++++..|||+++.+...+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|++.++++....
T Consensus       166 a~~~~~~~ta~~~~~~~~~~-~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~  243 (369)
T cd08301         166 CLLSCGVSTGLGAAWNVAKV-KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHD  243 (369)
T ss_pred             hhhcchhhHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccc
Confidence            99999999999998777788 89999999987 9999999999999999 899999999999999999999999876521


Q ss_pred             hhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        167 LDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       167 ~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                       +++.+.+++.++ ++|+++|++|+. .   +..++++++++ |+++++|
T Consensus       244 -~~~~~~v~~~~~~~~d~vid~~G~~~~---~~~~~~~~~~~~g~~v~~g  289 (369)
T cd08301         244 -KPVQEVIAEMTGGGVDYSFECTGNIDA---MISAFECVHDGWGVTVLLG  289 (369)
T ss_pred             -hhHHHHHHHHhCCCCCEEEECCCChHH---HHHHHHHhhcCCCEEEEEC
Confidence             145556665543 799999999976 5   78899999996 9999998

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=99.69  E-value=1.6e-15  Score=163.84  Aligned_cols=236  Identities=14%  Similarity=0.024  Sum_probs=157.3

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCCC--CCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhc
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAEDN--IPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPS  103 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~~--iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~  103 (655)
                      ..++|..|..|..++|++..+....  ..+..    .......+.+++.   ..+++++++++++++++++.|||+++..
T Consensus        99 ~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~  174 (357)
T PLN02514         99 CCGECSPCKSDLEQYCNKRIWSYNDVYTDGKP----TQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSH  174 (357)
T ss_pred             cCCCChhHhCCCcccCCCccccccccccCCcc----CCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHH
Confidence            3678999999988777665321100  00000    0011112223332   2355678899999999999999999877


Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .+.. ++|++|+|+|+ |++|++++|+||++|++|+++++++++++.+ +++|++.++++.+.      +.+.+.+.++|
T Consensus       175 ~~~~-~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~------~~~~~~~~~~D  246 (357)
T PLN02514        175 FGLK-QSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA------AEMQEAADSLD  246 (357)
T ss_pred             cccC-CCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh------HHHHHhcCCCc
Confidence            6666 79999999976 9999999999999999999888888777555 57999998886542      23344445799


Q ss_pred             EEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCe
Q psy14589        183 ADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLF  261 (655)
Q Consensus       183 vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~k  261 (655)
                      +++|++|+. .   ++.++++++++|+++.+|..                              ..+. .........+.
T Consensus       247 ~vid~~g~~~~---~~~~~~~l~~~G~iv~~G~~------------------------------~~~~-~~~~~~~~~~~  292 (357)
T PLN02514        247 YIIDTVPVFHP---LEPYLSLLKLDGKLILMGVI------------------------------NTPL-QFVTPMLMLGR  292 (357)
T ss_pred             EEEECCCchHH---HHHHHHHhccCCEEEEECCC------------------------------CCCC-cccHHHHhhCC
Confidence            999999975 6   88999999999999999820                              0000 00000001123


Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      .++..+... ....+.++++.+++++++. .+++.|                -+++.++++.+++..
T Consensus       293 ~~i~g~~~~-~~~~~~~~~~~~~~g~l~~-~i~~~~----------------l~~~~~A~~~~~~~~  341 (357)
T PLN02514        293 KVITGSFIG-SMKETEEMLEFCKEKGLTS-MIEVVK----------------MDYVNTAFERLEKND  341 (357)
T ss_pred             cEEEEEecC-CHHHHHHHHHHHHhCCCcC-cEEEEc----------------HHHHHHHHHHHHcCC
Confidence            345444433 3457899999999998653 222222                245778888877653

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=99.69  E-value=2e-16  Score=171.35  Aligned_cols=182  Identities=15%  Similarity=0.027  Sum_probs=135.1

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCC---CCCCCccccccc------ccccCCcE---Eeec---CCCCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAE---DNIPQLEDISKF------LKDSTGFS---LRPV---AGLLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~---~~iP~le~V~~~------l~~~~g~~---~~~v---~~l~~~~s~~eAAal   90 (655)
                      +....+.|.+|..|.+++|++.....   ...++.......      .....+|+   +++.   ..+++++++++++++
T Consensus        88 ~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l  167 (368)
T cd08300          88 YTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLL  167 (368)
T ss_pred             CCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhh
Confidence            34467789999999888887643100   000000000000      00012333   2332   224567889999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      +++..|||+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|++++||+.+.+ ++
T Consensus       168 ~~~~~ta~~a~~~~~~~-~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~  244 (368)
T cd08300         168 GCGVTTGYGAVLNTAKV-EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHD-KP  244 (368)
T ss_pred             ccchhhhHHHHHHhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccc-hH
Confidence            99999999998777788 89999999986 9999999999999999 799999999999999999999999987531 14


Q ss_pred             HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+.+.++ ++|+|+|++|+. .   +..++++++++ |+++.+|
T Consensus       245 ~~~~v~~~~~~g~d~vid~~g~~~~---~~~a~~~l~~~~G~~v~~g  288 (368)
T cd08300         245 IQQVLVEMTDGGVDYTFECIGNVKV---MRAALEACHKGWGTSVIIG  288 (368)
T ss_pred             HHHHHHHHhCCCCcEEEECCCChHH---HHHHHHhhccCCCeEEEEc
Confidence            6666766654 899999999985 6   88999999987 9999998

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK11899 prephenate dehydratase; Provisional

Probab=99.69  E-value=7e-17  Score=168.63  Aligned_cols=96  Identities=19%  Similarity=0.169  Sum_probs=84.1

Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---Cc
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GG  315 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~  315 (655)
                      +|+|+++++.+... .......|||++|++++ +||+|+++|+.|+.+|||||+|||||.+.+.|+|.||||++|   ++
T Consensus       173 ~TRF~vi~~~~~~~-~~~~~~~ktsl~~~~~~-~pGaL~~vL~~Fa~~gINLtkIeSRP~~~~~~~Y~F~id~eg~~~d~  250 (279)
T PRK11899        173 TTRFVVLSREADWA-ARGDGPIVTTFVFRVRN-IPAALYKALGGFATNGVNMTKLESYMVGGSFTATQFYADIEGHPEDR  250 (279)
T ss_pred             ceeEEEEecCCCCC-CCCCCCceEEEEEEeCC-CCChHHHHHHHHHHcCCCeeeEEeeecCCCCceEEEEEEEECCCCCH
Confidence            58999998753211 11122349999999987 999999999999999999999999999999999999999999   68


Q ss_pred             hHHHHHHHHHccCCcEEEecC
Q psy14589        316 DLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       316 ~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      +++++|++|++.+..+|+|||
T Consensus       251 ~v~~aL~~l~~~~~~~kvLGs  271 (279)
T PRK11899        251 NVALALEELRFFSEEVRILGV  271 (279)
T ss_pred             HHHHHHHHHHHhcCcEEEeee
Confidence            999999999999999999999

>cd08293 PTGR2 Prostaglandin reductase

Probab=99.68  E-value=3.9e-16  Score=166.51  Aligned_cols=120  Identities=17%  Similarity=0.115  Sum_probs=107.1

Q ss_pred             HhhhhhHHHHHHHHhhcCCCCCCCC--CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCcEEEeC
Q psy14589         87 GLAFRVFHSTQYIRHPSKPLYTPEP--DTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGADYVVDH  162 (655)
Q Consensus        87 AAal~~a~~TA~~aL~~~~~l~~~G--d~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd~vId~  162 (655)
                      ++++++++.|||+++.+.+.+ ++|  ++|+|+|++|++|++++|+||++|+ +|++++++++|.+.+++ +|+++++++
T Consensus       130 ~a~~~~~~~ta~~al~~~~~~-~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~  208 (345)
T cd08293         130 LGAVGLPGLTALIGIQEKGHI-TPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINY  208 (345)
T ss_pred             hhhcCcHHHHHHHHHHHhccC-CCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEEC
Confidence            567889999999999877777 666  9999999999999999999999999 89999999999998876 999999998


Q ss_pred             CccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        163 TIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       163 ~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.   ++.+.+++.++ ++|+++|++|+..   ...++++++++|+++.+|
T Consensus       209 ~~~---~~~~~i~~~~~~gvd~vid~~g~~~---~~~~~~~l~~~G~iv~~G  254 (345)
T cd08293         209 KTD---NVAERLRELCPEGVDVYFDNVGGEI---SDTVISQMNENSHIILCG  254 (345)
T ss_pred             CCC---CHHHHHHHHCCCCceEEEECCCcHH---HHHHHHHhccCCEEEEEe
Confidence            764   57777776654 8999999999987   889999999999999987

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=99.66  E-value=2.9e-15  Score=160.55  Aligned_cols=165  Identities=21%  Similarity=0.068  Sum_probs=121.5

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eeec---CCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPV---AGLLSSRDFLAGLAFRVFHSTQYI   99 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v---~~l~~~~s~~eAAal~~a~~TA~~   99 (655)
                      +......|.+|..|..++|....+.     +.       ...++|+   .++.   ..+++++++++++.+. +..++++
T Consensus        85 ~~~~c~~c~~c~~g~~~~c~~~~~~-----g~-------~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~  151 (347)
T PRK10309         85 PLLPCFTCPECLRGFYSLCAKYDFI-----GS-------RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH  151 (347)
T ss_pred             CCcCCCCCcchhCcCcccCCCccee-----cc-------CCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence            4556677888888877666543321     00       0112222   2322   2245677888777653 5566888


Q ss_pred             HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ++ +...+ ++|++|+|+|+ |++|++++|+||++|++ |++++++++|++.++++|+++++|+.+.   + .+.+.+.+
T Consensus       152 ~~-~~~~~-~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~---~-~~~~~~~~  224 (347)
T PRK10309        152 AF-HLAQG-CEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREM---S-APQIQSVL  224 (347)
T ss_pred             HH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCccc---C-HHHHHHHh
Confidence            86 44566 79999999986 99999999999999996 7889899999999999999999997753   2 33344443


Q ss_pred             --CCee-EEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 --SELD-ADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 --~gvD-vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        .++| +++||+|++ .   +..++++++++|+++++|
T Consensus       225 ~~~~~d~~v~d~~G~~~~---~~~~~~~l~~~G~iv~~G  260 (347)
T PRK10309        225 RELRFDQLILETAGVPQT---VELAIEIAGPRAQLALVG  260 (347)
T ss_pred             cCCCCCeEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence              2687 999999986 6   899999999999999998

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.66  E-value=4.9e-15  Score=157.95  Aligned_cols=166  Identities=15%  Similarity=0.071  Sum_probs=127.0

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEee---cCCCCCCCCHHhHhhhhhHHHHHHHHhhcCC
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRP---VAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP  105 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~---v~~l~~~~s~~eAAal~~a~~TA~~aL~~~~  105 (655)
                      ..+.|..|..|..++|+.+...     ++..    ......+..++   +..+++++++.+++++++++.|||+++... 
T Consensus        90 ~~~~~~~~~~g~~~~c~~~~~~-----~~~~----~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~-  159 (333)
T cd08296          90 HCGTCDACRRGDFVHCENGKVT-----GVTR----DGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-  159 (333)
T ss_pred             CCCCChhhhCcCcccCCCCCcc-----Cccc----CCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-
Confidence            3456778888876666554321     1100    00011111222   123456788899999999999999998655 


Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      .+ ++|++|+|+| +|++|++++|+||++|++|+++++++++++.++++|+++++++.+.   ++.+.+.+.. ++|+++
T Consensus       160 ~~-~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~---~~~~~~~~~~-~~d~vi  233 (333)
T cd08296         160 GA-KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKE---DVAEALQELG-GAKLIL  233 (333)
T ss_pred             CC-CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCc---cHHHHHHhcC-CCCEEE
Confidence            77 8999999999 6999999999999999999999999999999999999999998764   5666666553 799999


Q ss_pred             eCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        186 PGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       186 D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++|.. .   ++.++++++++|+++.+|
T Consensus       234 ~~~g~~~~---~~~~~~~l~~~G~~v~~g  259 (333)
T cd08296         234 ATAPNAKA---ISALVGGLAPRGKLLILG  259 (333)
T ss_pred             ECCCchHH---HHHHHHHcccCCEEEEEe
Confidence            998754 6   889999999999999998

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=99.65  E-value=7e-15  Score=158.32  Aligned_cols=178  Identities=16%  Similarity=0.026  Sum_probs=129.9

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---EeecC----CCCCCCCHHhHhhhhhHHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPVA----GLLSSRDFLAGLAFRVFHSTQY   98 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v~----~l~~~~s~~eAAal~~a~~TA~   98 (655)
                      +.+....|..|..+..++|.+..+-. .-++. .+.   ...++|+   .++..    .++++++..++++++++++|||
T Consensus        92 ~~~~~~~c~~~~~~~~~~c~~~~~~~-~~~~~-~~~---~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~  166 (361)
T cd08231          92 VGAPCGRCYRCLVGDPTKCENRKKYG-HEASC-DDP---HLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVL  166 (361)
T ss_pred             ccCCCCCChhHhCcCccccccchhcc-ccccc-cCC---CCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHH
Confidence            33446678888888777776543310 00000 000   0112232   33321    2345677888888889999999


Q ss_pred             HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589         99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus        99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      +++.+.... ++|++|||+|+ |++|++++|+||++|+ +|+++++++++.+.++++|++.++++......++...+.+.
T Consensus       167 ~al~~~~~~-~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~  244 (361)
T cd08231         167 AALDRAGPV-GAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDI  244 (361)
T ss_pred             HHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHH
Confidence            999877766 79999999985 9999999999999999 99999999999999999999999988753212233456665


Q ss_pred             CC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        178 GS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++  ++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       245 ~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g  280 (361)
T cd08231         245 TGGRGADVVIEASGHPAA---VPEGLELLRRGGTYVLVG  280 (361)
T ss_pred             hCCCCCcEEEECCCChHH---HHHHHHHhccCCEEEEEc
Confidence            43  799999999875 6   789999999999999987

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=99.65  E-value=2.8e-15  Score=160.86  Aligned_cols=126  Identities=17%  Similarity=0.070  Sum_probs=109.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++++++.+ +++.|||+++ ....+ ++|++|+|+|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus       143 lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~-~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga  218 (351)
T cd08233         143 LPDNVPLEEAALV-EPLAVAWHAV-RRSGF-KPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGA  218 (351)
T ss_pred             CcCCCCHHHhhhc-cHHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence            4567778777654 7889999998 56777 89999999986 9999999999999999 89999999999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++|+.+.   ++.+.+++.++  ++|+++|++|+. .   ++.++++++++|+++.+|
T Consensus       219 ~~~i~~~~~---~~~~~l~~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g  272 (351)
T cd08233         219 TIVLDPTEV---DVVAEVRKLTGGGGVDVSFDCAGVQAT---LDTAIDALRPRGTAVNVA  272 (351)
T ss_pred             CEEECCCcc---CHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHhccCCCEEEEEc
Confidence            999998864   57777776643  699999999865 6   889999999999999998

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=99.64  E-value=5.8e-15  Score=161.16  Aligned_cols=132  Identities=18%  Similarity=0.088  Sum_probs=112.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++.+++++++++.|||+++...  +.+ ++|++|+|+|++|++|++++|+||++|++|++++++++|++.++++|
T Consensus       160 iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~-~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G  238 (393)
T cd08246         160 KPKHLSWEEAAAYMLVGATAYRMLFGWNPNTV-KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALG  238 (393)
T ss_pred             CCCCCCHHHHhhhcccHHHHHHHHhhcccccC-CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcC
Confidence            456788999999999999999998654  567 89999999999999999999999999999989999999999999999


Q ss_pred             CcEEEeCCccc-------------------hhHHHHHHHhcCC---CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRE-------------------LDRFANQILSYGS---ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~-------------------~~d~~~~i~~~~~---gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++|+++.+                   ...+.+.+.+.++   ++|+++|++|+..   ++.++++++++|+++.+|
T Consensus       239 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~---~~~~~~~l~~~G~~v~~g  315 (393)
T cd08246         239 AEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT---FPTSVFVCDRGGMVVICA  315 (393)
T ss_pred             CCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh---HHHHHHHhccCCEEEEEc
Confidence            99999874320                   0024455655543   6999999999877   889999999999999987

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH)

Probab=99.64  E-value=5.5e-16  Score=130.70  Aligned_cols=72  Identities=51%  Similarity=0.797  Sum_probs=68.7

Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINII  334 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL  334 (655)
                      +|++|++++ +||+|+++|+.|++++|||++|||||++..+|+|.|||||+| ++++++++++|++.+..++++
T Consensus         1 tsl~f~l~~-~pG~L~~vL~~f~~~~iNlt~IeSRP~~~~~~~y~Ffvd~~~~~~~~~~~l~~L~~~~~~~~~~   73 (74)
T cd04904           1 TSLIFSLKE-EVGALARALKLFEEFGVNLTHIESRPSRRNGSEYEFFVDCEVDRGDLDQLISSLRRVVADVNIL   73 (74)
T ss_pred             CEEEEEeCC-CCcHHHHHHHHHHHCCCcEEEEECCCCCCCCceEEEEEEEEcChHHHHHHHHHHHHhcCeEEEc
Confidence            588999988 899999999999999999999999999999999999999999 888999999999999999875

ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy

>PRK11898 prephenate dehydratase; Provisional

Probab=99.64  E-value=6.3e-16  Score=162.27  Aligned_cols=97  Identities=19%  Similarity=0.181  Sum_probs=84.2

Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---Cc
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GG  315 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~  315 (655)
                      +|+|+++++..... .......|+|++|++++++||+|.++|+.|++++|||++|||||.+..+|+|.|||||+|   ++
T Consensus       175 ~TRF~vi~~~~~~~-~~~~~~~ktslif~l~~~~pGsL~~~L~~F~~~~INLt~IeSRP~~~~~~~y~F~vd~eg~~~~~  253 (283)
T PRK11898        175 RTRFWLLGRKKPPP-PLRTGGDKTSLVLTLPNNLPGALYKALSEFAWRGINLTRIESRPTKTGLGTYFFFIDVEGHIDDV  253 (283)
T ss_pred             ceEEEEEEcCcccC-CCCCCCCeEEEEEEeCCCCccHHHHHHHHHHHCCCCeeeEecccCCCCCccEEEEEEEEccCCCH
Confidence            57899998753211 112334599999999885699999999999999999999999999999999999999999   55


Q ss_pred             hHHHHHHHHHccCCcEEEecC
Q psy14589        316 DLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       316 ~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      ++++++++|++.|..+++||+
T Consensus       254 ~~~~al~~L~~~~~~~k~LGs  274 (283)
T PRK11898        254 LVAEALKELEALGEDVKVLGS  274 (283)
T ss_pred             HHHHHHHHHHHhcCcEEEEEe
Confidence            899999999999999999999

>cd08230 glucose_DH Glucose dehydrogenase

Probab=99.63  E-value=5.6e-15  Score=159.10  Aligned_cols=167  Identities=18%  Similarity=0.098  Sum_probs=115.5

Q ss_pred             cccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhc-
Q psy14589         28 YPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPS-  103 (655)
Q Consensus        28 l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~-  103 (655)
                      .....|..|..|..++|+.+.+...++.+..+      ....+.+++..   .++++++  +++++.+++.++++++.. 
T Consensus        90 ~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G------~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~  161 (355)
T cd08230          90 RPPGKCLNCRIGRPDFCETGEYTERGIKGLHG------FMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQA  161 (355)
T ss_pred             cCCCcChhhhCcCcccCCCcceeccCcCCCCc------cceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHH
Confidence            44678999999987777665432111111101      01112222222   2334555  456666677666555422 


Q ss_pred             -----CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---ChHHHHHHHhCCCcEEEeCCccchhHHHHHHH
Q psy14589        104 -----KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG---CPVGVAKAYGLGADYVVDHTIRELDRFANQIL  175 (655)
Q Consensus       104 -----~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~---s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~  175 (655)
                           .... ++|++|+|.|+ |+||++++|+||++|++|+++++   +++|++.++++||+. +++.+.   ++.+ . 
T Consensus       162 ~~~~~~~~~-~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~---~~~~-~-  233 (355)
T cd08230         162 EAVQKRLPT-WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKT---PVAE-V-  233 (355)
T ss_pred             hhhhhhccc-CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCcc---chhh-h-
Confidence                 2234 68999999997 99999999999999999999987   688999999999997 566553   3333 2 


Q ss_pred             hcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        176 SYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +..+++|+|+|++|++ .   +..++++++++|+++++|
T Consensus       234 ~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~G  269 (355)
T cd08230         234 KLVGEFDLIIEATGVPPL---AFEALPALAPNGVVILFG  269 (355)
T ss_pred             hhcCCCCEEEECcCCHHH---HHHHHHHccCCcEEEEEe
Confidence            2234799999999986 5   889999999999999998

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG1196|consensus

Probab=99.62  E-value=5.5e-15  Score=151.87  Aligned_cols=124  Identities=13%  Similarity=0.025  Sum_probs=112.7

Q ss_pred             HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEEeCC
Q psy14589         85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVVDHT  163 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vId~~  163 (655)
                      .-...+.++++|||.++.+.... ++|++|+|.||||+||+++.|+||.+|++|+++++|++|.+.++ ++|-|.++||+
T Consensus       129 ~ylg~lGm~glTAy~Gf~ei~~p-k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK  207 (343)
T KOG1196|consen  129 YYLGLLGMPGLTAYAGFYEICSP-KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYK  207 (343)
T ss_pred             hhhhccCCchhHHHHHHHHhcCC-CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceecc
Confidence            33567899999999999999998 99999999999999999999999999999999999999999986 57999999999


Q ss_pred             ccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEee
Q psy14589        164 IRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFF  214 (655)
Q Consensus       164 ~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~  214 (655)
                      +++  +..+++++... |+|+-+|.||+..   ++..+..|+..||+++-|.
T Consensus       208 ~e~--~~~~aL~r~~P~GIDiYfeNVGG~~---lDavl~nM~~~gri~~CG~  254 (343)
T KOG1196|consen  208 EES--DLSAALKRCFPEGIDIYFENVGGKM---LDAVLLNMNLHGRIAVCGM  254 (343)
T ss_pred             Ccc--CHHHHHHHhCCCcceEEEeccCcHH---HHHHHHhhhhccceEeeee
Confidence            863  67777777644 9999999999999   9999999999999999983

>KOG0022|consensus

Probab=99.62  E-value=3.6e-15  Score=154.12  Aligned_cols=229  Identities=14%  Similarity=0.055  Sum_probs=171.1

Q ss_pred             cccccchhHhhhhhhHHHhCCCCC--CCCC-----Cc----cccccccc--ccCCcEEeecC---CCCCCCCHHhHhhhh
Q psy14589         28 YPTHACKEHNHVFPLLIQNCGYAE--DNIP-----QL----EDISKFLK--DSTGFSLRPVA---GLLSSRDFLAGLAFR   91 (655)
Q Consensus        28 l~~~aC~~~~~G~~~l~~~~~y~~--~~iP-----~l----e~V~~~l~--~~~g~~~~~v~---~l~~~~s~~eAAal~   91 (655)
                      -+...|..|..+..+||.......  ...+     .+    +.+--++.  ..+.|.+++..   .+.+..+.+.++-+.
T Consensus        95 p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLg  174 (375)
T KOG0022|consen   95 PQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLG  174 (375)
T ss_pred             cCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEee
Confidence            467899999999999998876642  1111     11    12222222  22335555433   345667788888899


Q ss_pred             hHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHH
Q psy14589         92 VFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRF  170 (655)
Q Consensus        92 ~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~  170 (655)
                      |..+|+|.|..+.+.+ ++|++|.|.|- |+||++++|-||++|| ++|++|.+++|.+.++++||++.||..+.. +..
T Consensus       175 CGvsTG~GAa~~~Akv-~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~-~~i  251 (375)
T KOG0022|consen  175 CGVSTGYGAAWNTAKV-EPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLK-KPI  251 (375)
T ss_pred             ccccccchhhhhhccc-CCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhcc-ccH
Confidence            9999999999999999 99999999999 9999999999999999 999999999999999999999999987421 236


Q ss_pred             HHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccc
Q psy14589        171 ANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQ  247 (655)
Q Consensus       171 ~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~  247 (655)
                      .+.+.+.++ |+|+-+||+|+. +   +.+++.+.+.| |+-|++|.                               ..
T Consensus       252 ~evi~EmTdgGvDysfEc~G~~~~---m~~al~s~h~GwG~sv~iGv-------------------------------~~  297 (375)
T KOG0022|consen  252 QEVIIEMTDGGVDYSFECIGNVST---MRAALESCHKGWGKSVVIGV-------------------------------AA  297 (375)
T ss_pred             HHHHHHHhcCCceEEEEecCCHHH---HHHHHHHhhcCCCeEEEEEe-------------------------------cC
Confidence            677777775 999999999998 6   89999999999 99999983                               11


Q ss_pred             ccccc--CCCCCCCCe---EEEEEEccCCCcchHHHHHHHHHhCCcceeeeec
Q psy14589        248 PLIQS--CHSCPFSLF---DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIES  295 (655)
Q Consensus       248 p~~~~--~~~~~~~~k---tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeS  295 (655)
                      ...+.  .+....++|   -+...-.+.  ..++-++.+.+.++.+||...-|
T Consensus       298 ~~~~i~~~p~~l~~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~IT  348 (375)
T KOG0022|consen  298 AGQEISTRPFQLVTGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFIT  348 (375)
T ss_pred             CCcccccchhhhccccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhh
Confidence            11111  122233443   333333444  34788999999999999976544

>PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional

Probab=99.61  E-value=1.6e-15  Score=165.25  Aligned_cols=95  Identities=17%  Similarity=0.298  Sum_probs=84.2

Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---Cc
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GG  315 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~  315 (655)
                      +|+|+++++.+...  ......|||++|+++| +||+|.++|+.|+.+||||++|||||++..+|+|.||||++|   ++
T Consensus       277 ~TRF~vi~~~~~~~--~~~~~~ktsl~~~~~~-~pGaL~~~L~~Fa~~giNLtkIeSRP~~~~~~~Y~Ffid~eg~~~d~  353 (386)
T PRK10622        277 ITRFIVLARKAINV--SDQVPAKTTLLMATGQ-QAGALVEALLVLRNHNLIMTKLESRPIHGNPWEEMFYLDVQANLRSA  353 (386)
T ss_pred             cceEEEEecCCCCC--CCCCCCcEEEEEEcCC-CCcHHHHHHHHHHHcCCCeeEEEeeecCCCCceEEEEEEEeCCCCCH
Confidence            68999999754211  1112259999999987 999999999999999999999999999999999999999999   67


Q ss_pred             hHHHHHHHHHccCCcEEEecC
Q psy14589        316 DLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       316 ~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      .++++|++|++.|..+|+||+
T Consensus       354 ~~~~aL~~l~~~~~~~kvLGs  374 (386)
T PRK10622        354 EMQKALKELGEITRSLKVLGC  374 (386)
T ss_pred             HHHHHHHHHHHhcCcEEEeee
Confidence            899999999999999999999

>PLN02317 arogenate dehydratase

Probab=99.61  E-value=1.8e-15  Score=162.90  Aligned_cols=95  Identities=22%  Similarity=0.368  Sum_probs=83.6

Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCC--------------cc
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIE--------------NN  304 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~--------------~~  304 (655)
                      .|+|+++++++..  .......|||++|++++ +||+|.++|+.|+.++|||++|||||.++.+              |+
T Consensus       263 ~TRFlvl~r~~~~--~~~~~~~KTSivfsl~~-~pG~L~k~L~~Fa~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~e  339 (382)
T PLN02317        263 VTRFLMLAREPII--PRTDRPFKTSIVFSLEE-GPGVLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSNSGTAKYFD  339 (382)
T ss_pred             eeeEEEEecCCcC--CCCCCCccEEEEEEcCC-CCchHHHHHHHHHHCCCCEEEEEeeecCCCCcccccccccccccccc
Confidence            6899999986421  11122348999999998 8999999999999999999999999999884              99


Q ss_pred             eEEEEEecC---CchHHHHHHHHHccCCcEEEecC
Q psy14589        305 YEFMVECAP---GGDLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       305 Y~FfVd~eg---~~~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      |.|||||++   +++++++|++|++.+..+++||+
T Consensus       340 Y~FyVD~eg~~~d~~~~~aL~~L~~~~~~lrvLGs  374 (382)
T PLN02317        340 YLFYVDFEASMADPRAQNALAHLQEFATFLRVLGS  374 (382)
T ss_pred             EEEEEEEEcCcCCHHHHHHHHHHHHhcCeEEEEee
Confidence            999999999   67899999999999999999999

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=99.61  E-value=3.3e-14  Score=152.52  Aligned_cols=127  Identities=19%  Similarity=0.053  Sum_probs=110.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++++++++.|||+++ +...+ ++|++|+|+|+ |++|++++|+||++|+ .|+++++++++.+.++++|+
T Consensus       136 lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~  212 (351)
T cd08285         136 LPDGLTDEQAVMLPDMMSTGFHGA-ELANI-KLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGA  212 (351)
T ss_pred             CCCCCCHHHhhhhccchhhHHHHH-HccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCC
Confidence            456778999999999999999996 55677 89999999975 9999999999999999 58999899999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++...   ++.+.+.+..  .++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       213 ~~~v~~~~~---~~~~~i~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g  266 (351)
T cd08285         213 TDIVDYKNG---DVVEQILKLTGGKGVDAVIIAGGGQDT---FEQALKVLKPGGTISNVN  266 (351)
T ss_pred             ceEecCCCC---CHHHHHHHHhCCCCCcEEEECCCCHHH---HHHHHHHhhcCCEEEEec
Confidence            999998764   5666666553  3799999999975 5   799999999999999987

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=99.60  E-value=9.6e-15  Score=160.28  Aligned_cols=181  Identities=16%  Similarity=0.099  Sum_probs=123.4

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCC-CCCcccccccccccCCcEEeecC-----CCCCCCC----HHhHhhhhhHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDN-IPQLEDISKFLKDSTGFSLRPVA-----GLLSSRD----FLAGLAFRVFH   94 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~-iP~le~V~~~l~~~~g~~~~~v~-----~l~~~~s----~~eAAal~~a~   94 (655)
                      .+.+..+.|..|+.|..++|.+....... ..+.......-.....|.++|..     .++++.+    ..+++++.++.
T Consensus        92 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~  171 (393)
T TIGR02819        92 PFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIF  171 (393)
T ss_pred             ecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHH
Confidence            35667889999999988888764321000 00000000000001112223321     1222232    24567888999


Q ss_pred             HHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589         95 STQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus        95 ~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~  173 (655)
                      .|+|+++.. ..+ ++|++|+|.|+ |+||++++|+||++|++ |++++++++|++.++++||+. +++...  +++.+.
T Consensus       172 ~ta~~a~~~-~~~-~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~~~--~~~~~~  245 (393)
T TIGR02819       172 PTGYHGAVT-AGV-GPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLSKD--ATLPEQ  245 (393)
T ss_pred             HHHHHHHHh-cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecCCc--ccHHHH
Confidence            999999854 667 89999999766 99999999999999997 455667788999999999985 554432  145556


Q ss_pred             HHhcCC--CeeEEEeCCCcc---------------hHHHHHHHHHHhccccceEEEee
Q psy14589        174 ILSYGS--ELDADHPGFTDP---------------VYRARRKYFADLAFNYKHFFFFF  214 (655)
Q Consensus       174 i~~~~~--gvDvV~D~vG~~---------------~~~~l~~~l~~l~~gGrlv~v~~  214 (655)
                      +.+.++  ++|+++|++|.+               +   +++++++++++|+++.+|.
T Consensus       246 v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~G~i~~~G~  300 (393)
T TIGR02819       246 IEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATV---LNSLMEVTRVGGAIGIPGL  300 (393)
T ss_pred             HHHHcCCCCCcEEEECCCCccccccccccccchHHH---HHHHHHHhhCCCEEEEeee
Confidence            665543  799999999975               5   8999999999999999993

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=99.60  E-value=2.6e-14  Score=156.58  Aligned_cols=132  Identities=18%  Similarity=0.081  Sum_probs=111.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhc--CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPS--KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~--~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++++++++++++.|||+++..  .+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|
T Consensus       156 vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~-~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g  234 (398)
T TIGR01751       156 KPKHLTWEEAACPGLTGATAYRQLVGWNPATV-KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELG  234 (398)
T ss_pred             CCCCCCHHHHhhccchHHHHHHHHhhhhccCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcC
Confidence            45678899999999999999999864  4667 79999999999999999999999999999988889999999999999


Q ss_pred             CcEEEeCCccc-------------------hhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRE-------------------LDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~-------------------~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++|+...+                   ...+.+.+.+.++  ++|+++||+|+..   +..++++++++|+++.+|
T Consensus       235 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~---~~~~~~~l~~~G~~v~~g  310 (398)
T TIGR01751       235 AEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT---FPTSVFVCRRGGMVVICG  310 (398)
T ss_pred             CCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH---HHHHHHhhccCCEEEEEc
Confidence            99999975420                   0023344555543  7999999999777   889999999999999998

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>KOG1202|consensus

Probab=99.59  E-value=3.5e-15  Score=171.39  Aligned_cols=167  Identities=19%  Similarity=0.186  Sum_probs=138.8

Q ss_pred             hhhHHHhCCCCCCCCCC-cccccc------cccccCCcEE---eecCC--------------CCCCCCHHhHhhhhhHHH
Q psy14589         40 FPLLIQNCGYAEDNIPQ-LEDISK------FLKDSTGFSL---RPVAG--------------LLSSRDFLAGLAFRVFHS   95 (655)
Q Consensus        40 ~~~l~~~~~y~~~~iP~-le~V~~------~l~~~~g~~~---~~v~~--------------l~~~~s~~eAAal~~a~~   95 (655)
                      +|++-..++++++.||+ +..-+.      -+....|.++   +|+.+              ++..++++||++.|+.++
T Consensus      1459 RDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYs 1538 (2376)
T KOG1202|consen 1459 RDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDASGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYS 1538 (2376)
T ss_pred             HHHHHhcCCCCcccCCCccchhhheeceeeccccCCCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEee
Confidence            57788889999999998 321111      1223344443   33322              445789999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHH
Q psy14589         96 TQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFA  171 (655)
Q Consensus        96 TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~  171 (655)
                      |||++|..++.+ ++|+++|||++|||||++|+.+|-++|++|+.|++|.+|++++.+    |-..++-|.++.   ++.
T Consensus      1539 TaYYALVvRG~m-kkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt---sFE 1614 (2376)
T KOG1202|consen 1539 TAYYALVVRGQM-KKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT---SFE 1614 (2376)
T ss_pred             eehhhhhhhccc-cCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc---cHH
Confidence            999999999999 999999999999999999999999999999999999999999863    677777777765   788


Q ss_pred             HHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        172 NQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       172 ~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+++.++  |+|+|+++...+.   ++.+++||+.+||..-+|
T Consensus      1615 q~vl~~T~GrGVdlVLNSLaeEk---LQASiRCLa~~GRFLEIG 1655 (2376)
T KOG1202|consen 1615 QHVLWHTKGRGVDLVLNSLAEEK---LQASIRCLALHGRFLEIG 1655 (2376)
T ss_pred             HHHHHHhcCCCeeeehhhhhHHH---HHHHHHHHHhcCeeeeec
Confidence            88988864  9999999998777   999999999999999997

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=99.58  E-value=7.5e-14  Score=148.78  Aligned_cols=127  Identities=15%  Similarity=0.041  Sum_probs=110.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      ++.+++..++++++++++|||+++ ....+ ++|++|+|.|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus       137 lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~-~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~  213 (347)
T cd05278         137 IPDGLPDEDALMLSDILPTGFHGA-ELAGI-KPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGA  213 (347)
T ss_pred             CCCCCCHHHHhhhcchhhheeehh-hhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCC
Confidence            456788999999999999999998 56777 89999999765 9999999999999997 89899888889889999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+.   ++.+.+++..  +++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       214 ~~vi~~~~~---~~~~~i~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g  267 (347)
T cd05278         214 TDIINPKNG---DIVEQILELTGGRGVDCVIEAVGFEET---FEQAVKVVRPGGTIANVG  267 (347)
T ss_pred             cEEEcCCcc---hHHHHHHHHcCCCCCcEEEEccCCHHH---HHHHHHHhhcCCEEEEEc
Confidence            999998764   5666666553  3799999999984 6   899999999999999887

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=99.57  E-value=3.1e-14  Score=154.84  Aligned_cols=182  Identities=15%  Similarity=0.039  Sum_probs=132.0

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCC-CCCCC--ccccc------ccccccCCcE---EeecC---CCCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAE-DNIPQ--LEDIS------KFLKDSTGFS---LRPVA---GLLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~-~~iP~--le~V~------~~l~~~~g~~---~~~v~---~l~~~~s~~eAAal   90 (655)
                      +....+.|..|+.|.+++|+...+.. ..+.+  .....      .......+|+   .++..   .+++++++.+++++
T Consensus        92 ~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~  171 (373)
T cd08299          92 FVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLI  171 (373)
T ss_pred             CCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhhee
Confidence            34567889999999888887654311 00100  00000      0000112233   33332   24567889999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      ++++.|||+++.+.+.+ ++|++|+|+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++++.+.+ ++
T Consensus       172 ~~~~~ta~~~~~~~~~~-~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~-~~  248 (373)
T cd08299         172 GCGFSTGYGAAVNTAKV-TPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYK-KP  248 (373)
T ss_pred             ccchHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccc-hh
Confidence            99999999998777888 89999999976 9999999999999999 899999999999999999999999876421 12


Q ss_pred             HHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHh-ccccceEEEe
Q psy14589        170 FANQILSYG-SELDADHPGFTDP-VYRARRKYFADL-AFNYKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l-~~gGrlv~v~  213 (655)
                      ..+.+.+.+ +++|+++|++|++ .   +..++..+ +++|+++.+|
T Consensus       249 ~~~~v~~~~~~~~d~vld~~g~~~~---~~~~~~~~~~~~G~~v~~g  292 (373)
T cd08299         249 IQEVLTEMTDGGVDFSFEVIGRLDT---MKAALASCHEGYGVSVIVG  292 (373)
T ss_pred             HHHHHHHHhCCCCeEEEECCCCcHH---HHHHHHhhccCCCEEEEEc
Confidence            455555543 3799999999975 5   67777765 5799999998

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=99.56  E-value=3e-14  Score=151.17  Aligned_cols=127  Identities=15%  Similarity=0.116  Sum_probs=108.5

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEE-cCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFII-GANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~-GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.++|+++++++|||..+ +....  +|++++|+ |++|++|++++|+||++|++|++++++++|++.++++|+
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~--~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~  189 (324)
T cd08291         113 LPDGVSFEQGASSFVNPLTALGML-ETARE--EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGA  189 (324)
T ss_pred             CCCCCCHHHHhhhcccHHHHHHHH-Hhhcc--CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence            456788999999999999998654 44444  56667766 888999999999999999999999999999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++|+.+.   ++.+.+++.+.  ++|+++|++|+..   ....+++++++|+++.+|
T Consensus       190 ~~~i~~~~~---~~~~~v~~~~~~~~~d~vid~~g~~~---~~~~~~~l~~~G~~v~~g  242 (324)
T cd08291         190 EYVLNSSDP---DFLEDLKELIAKLNATIFFDAVGGGL---TGQILLAMPYGSTLYVYG  242 (324)
T ss_pred             cEEEECCCc---cHHHHHHHHhCCCCCcEEEECCCcHH---HHHHHHhhCCCCEEEEEE
Confidence            999998764   57777776643  7999999999887   788899999999999998

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=99.56  E-value=3.7e-14  Score=149.32  Aligned_cols=128  Identities=13%  Similarity=0.032  Sum_probs=113.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++++++++++.|||+++. .+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       109 ip~~~~~~~aa~~~~~~~ta~~~~~-~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~  186 (324)
T cd08292         109 LPDGISDEVAAQLIAMPLSALMLLD-FLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIG  186 (324)
T ss_pred             CCCCCCHHHhhhccccHHHHHHHHH-hhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCC
Confidence            4567889999999999999999985 4677 8999999999999999999999999999999999999999999899999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++++.+.   ++.+.+.+.+.  ++|+|+|++|+..   ...++++++++|+++.+|
T Consensus       187 ~~~~~~~~---~~~~~i~~~~~~~~~d~v~d~~g~~~---~~~~~~~l~~~g~~v~~g  238 (324)
T cd08292         187 PVVSTEQP---GWQDKVREAAGGAPISVALDSVGGKL---AGELLSLLGEGGTLVSFG  238 (324)
T ss_pred             EEEcCCCc---hHHHHHHHHhCCCCCcEEEECCCChh---HHHHHHhhcCCcEEEEEe
Confidence            99988764   56677776643  7999999999887   889999999999999987

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=99.56  E-value=2.1e-13  Score=146.19  Aligned_cols=126  Identities=12%  Similarity=-0.006  Sum_probs=106.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++++ .++.|+|+++ +...+ ++|++|+|.| +|++|++++|+||++|++ |++++++++|.+.+.++|+
T Consensus       145 lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~-~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~  220 (350)
T cd08256         145 VPDDIPPEDAILI-EPLACALHAV-DRANI-KFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGA  220 (350)
T ss_pred             CCCCCCHHHHhhh-hHHHHHHHHH-HhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCC
Confidence            4567788888887 8999999998 66777 8999999955 599999999999999985 6788888999998999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+.   ++.+.+.+.++  ++|+++|++|+. .   +..++++++++|+++.++
T Consensus       221 ~~v~~~~~~---~~~~~~~~~~~~~~vdvvld~~g~~~~---~~~~~~~l~~~G~~v~~g  274 (350)
T cd08256         221 DVVLNPPEV---DVVEKIKELTGGYGCDIYIEATGHPSA---VEQGLNMIRKLGRFVEFS  274 (350)
T ss_pred             cEEecCCCc---CHHHHHHHHhCCCCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEc
Confidence            999987754   46666666543  799999999964 6   788999999999999987

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.56  E-value=5.9e-14  Score=146.71  Aligned_cols=128  Identities=23%  Similarity=0.106  Sum_probs=113.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|||+++.....+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       111 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  189 (320)
T cd08243         111 IDSDLSWAELAALPETYYTAWGSLFRSLGL-QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGAD  189 (320)
T ss_pred             CCCCCCHHHHHhcchHHHHHHHHHHHhcCC-CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc
Confidence            456778899999999999999999887777 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++...    ++.+.+.+.++++|+++|++|+..   +..++++++++|+++.+|
T Consensus       190 ~~~~~~~----~~~~~i~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g  238 (320)
T cd08243         190 EVVIDDG----AIAEQLRAAPGGFDKVLELVGTAT---LKDSLRHLRPGGIVCMTG  238 (320)
T ss_pred             EEEecCc----cHHHHHHHhCCCceEEEECCChHH---HHHHHHHhccCCEEEEEc
Confidence            9886432    455566655448999999999877   899999999999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.56  E-value=1.4e-13  Score=150.18  Aligned_cols=124  Identities=22%  Similarity=0.128  Sum_probs=104.1

Q ss_pred             HhHhhhhhHHHHHHHHhhcC-CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeC
Q psy14589         85 LAGLAFRVFHSTQYIRHPSK-PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDH  162 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~-~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~  162 (655)
                      .++|+++++++|||+++... +.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|.+.++++|+++++++
T Consensus       178 ~~~a~~~~~~~ta~~al~~~~~~~-~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~  255 (384)
T cd08265         178 FEAGALVEPTSVAYNGLFIRGGGF-RPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP  255 (384)
T ss_pred             HHHhhhhhHHHHHHHHHHhhcCCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcc
Confidence            44778889999999998655 677 89999999975 9999999999999999 79999998999999999999999987


Q ss_pred             CccchhHHHHHHHhcCC--CeeEEEeCCCcc--hHHHHHHHHHHhccccceEEEe
Q psy14589        163 TIRELDRFANQILSYGS--ELDADHPGFTDP--VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       163 ~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+....++.+.+.+.+.  ++|+|+|++|+.  .   +..++++++++||++.+|
T Consensus       256 ~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~---~~~~~~~l~~~G~~v~~g  307 (384)
T cd08265         256 TKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPAT---IPQMEKSIAINGKIVYIG  307 (384)
T ss_pred             cccccccHHHHHHHhcCCCCCCEEEECCCCcHHH---HHHHHHHHHcCCEEEEEC
Confidence            64211145566666543  799999999974  5   789999999999999987

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.55  E-value=1.2e-13  Score=146.75  Aligned_cols=128  Identities=16%  Similarity=0.042  Sum_probs=108.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++++++++.|||+++ ..+.+ ++|++|+|+|+ |++|++++|+||+ +|++|+++++++++++.++++|+
T Consensus       132 ~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~-~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~  208 (338)
T PRK09422        132 VPEGLDPAQASSITCAGVTTYKAI-KVSGI-KPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGA  208 (338)
T ss_pred             CCCCCCHHHeehhhcchhHHHHHH-HhcCC-CCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCC
Confidence            456788999999999999999998 56677 89999999995 9999999999998 49999999999999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCCCee-EEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGSELD-ADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~gvD-vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++...  +++.+.+++..+++| +++++.++..   ++.++++++++|+++.+|
T Consensus       209 ~~v~~~~~~--~~~~~~v~~~~~~~d~vi~~~~~~~~---~~~~~~~l~~~G~~v~~g  261 (338)
T PRK09422        209 DLTINSKRV--EDVAKIIQEKTGGAHAAVVTAVAKAA---FNQAVDAVRAGGRVVAVG  261 (338)
T ss_pred             cEEeccccc--ccHHHHHHHhcCCCcEEEEeCCCHHH---HHHHHHhccCCCEEEEEe
Confidence            999997541  145666766655788 4555555556   899999999999999987

>cd04930 ACT_TH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH)

Probab=99.55  E-value=1.4e-14  Score=132.19  Aligned_cols=74  Identities=27%  Similarity=0.464  Sum_probs=69.4

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINII  334 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL  334 (655)
                      +|+|++|++++ +||+|+++|+.|+.++|||++|||||++..+|+|.|||||+| ...+.+++++|++.+..+++.
T Consensus        40 ~ktSlifsl~~-~pGsL~~iL~~Fa~~gINLt~IESRP~~~~~~eY~FfIdieg~~~~~~~aL~~L~~~~~~~kv~  114 (115)
T cd04930          40 QKATLLFSLKE-GFSSLSRILKVFETFEAKIHHLESRPSRKEGGDLEVLVRCEVHRSDLLQLISSLRQVAEDVRLT  114 (115)
T ss_pred             ccEEEEEEeCC-CCcHHHHHHHHHHHCCCCEEEEECCcCCCCCceEEEEEEEEeCHHHHHHHHHHHHHhcCeeEec
Confidence            48999999998 899999999999999999999999999999999999999999 557999999999999988764

ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH). TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines (dopamine, noradrenaline and adrenaline), functioning as hormones and neurotransmitters. The enzyme is not regulated by its amino acid substrate, but instead by phosphorylation at several serine residues located N-terminal of the ACT domain, and by feedback inhibition by catecholamines at the active site. Members of this CD belong to the superfamily of ACT regulatory domains.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.55  E-value=7.2e-14  Score=148.24  Aligned_cols=128  Identities=22%  Similarity=0.189  Sum_probs=111.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCC-----CCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE-----PDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA  151 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~-----Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a  151 (655)
                      ++++++++++|++++++.|||+++.....+ ++     |++|+|+|++|++|++++|+||++ |++|+++++++++.+.+
T Consensus       112 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       112 KPKSLSFAEAAALPLTSITAWELLFDRLGI-NDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             CCCCCCHHHHhhhhHHHHHHHHHHHHhcCC-CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            556789999999999999999998777777 65     999999999999999999999998 99999999999999999


Q ss_pred             HhCCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCc-chHHHHHHHHHHhccccceEEEe
Q psy14589        152 YGLGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTD-PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       152 ~~LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~-~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|+++++++..    ++.+.+.+.++ ++|+++|++|+ ..   ...++++++++|+++.++
T Consensus       191 ~~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~---~~~~~~~l~~~G~~v~~~  247 (336)
T TIGR02817       191 LELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQH---FKEIVELLAPQGRFALID  247 (336)
T ss_pred             HHcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHH---HHHHHHHhccCCEEEEEc
Confidence            9999999998754    35555655543 79999999865 46   789999999999999864

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.54  E-value=2e-13  Score=144.38  Aligned_cols=128  Identities=19%  Similarity=0.076  Sum_probs=109.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++++..+++++++++.|||+++.....+ ++|++|+|.|+ |++|++++|+|+.+|++|+++++++++.+.++++|++
T Consensus       134 lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~-~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~  211 (338)
T cd08254         134 VPDGVPFAQAAVATDAVLTPYHAVVRAGEV-KPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGAD  211 (338)
T ss_pred             CCCCCCHHHhhhhcchHHHHHHHHHhccCC-CCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC
Confidence            456778999999999999999999888888 89999999765 9999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSY-GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++.+.   +..+.+... .+++|+++|++|.. .   ++.++++++++|+++.++
T Consensus       212 ~~~~~~~~---~~~~~~~~~~~~~~D~vid~~g~~~~---~~~~~~~l~~~G~~v~~g  263 (338)
T cd08254         212 EVLNSLDD---SPKDKKAAGLGGGFDVIFDFVGTQPT---FEDAQKAVKPGGRIVVVG  263 (338)
T ss_pred             EEEcCCCc---CHHHHHHHhcCCCceEEEECCCCHHH---HHHHHHHhhcCCEEEEEC
Confidence            99987653   333434222 23799999999865 6   889999999999999987

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd04929 ACT_TPH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes

Probab=99.54  E-value=1.2e-14  Score=122.49  Aligned_cols=69  Identities=39%  Similarity=0.653  Sum_probs=64.1

Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcE
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYI  331 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v  331 (655)
                      ++++|++++ +||+|+++|+.|++++|||++|||||++..+|+|.|||||+| ..++++++++|++.+...
T Consensus         1 tsl~~~l~~-~~g~L~~iL~~f~~~~inl~~IeSRP~~~~~~~y~F~id~e~~~~~i~~~l~~l~~~~~~~   70 (74)
T cd04929           1 TSVIFSLKN-EVGGLAKALKLFQELGINVVHIESRKSKRRSSEFEIFVDCECDQRRLDELVQLLKREVASV   70 (74)
T ss_pred             CEEEEEcCC-CCcHHHHHHHHHHHCCCCEEEEEeccCCCCCceEEEEEEEEcCHHHHHHHHHHHHHhcccc
Confidence            478999988 899999999999999999999999999999999999999999 669999999999877643

ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxytryptamine (serotonin) and the first reaction in the synthesis of melatonin. Very little is known about the role of the ACT domain in TPH, which appears to be regulated by phosphorylation but not by its substrate or cofactor. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=99.53  E-value=1.6e-13  Score=147.14  Aligned_cols=128  Identities=22%  Similarity=0.110  Sum_probs=110.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++++++++.|||+++...... ++|++|+|+|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus       144 ~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~-~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~  221 (350)
T cd08240         144 DPGGLDPALAATLACSGLTAYSAVKKLMPL-VADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGA  221 (350)
T ss_pred             CCCCCCHHHeehhhchhhhHHHHHHhcccC-CCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC
Confidence            456778999999999999999999877766 78999999975 9999999999999999 78899899999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+.   ++.+.+.+..+ ++|+++|++|+. .   ++.++++|+++|+++.++
T Consensus       222 ~~~~~~~~~---~~~~~~~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~g~~v~~g  274 (350)
T cd08240         222 DVVVNGSDP---DAAKRIIKAAGGGVDAVIDFVNNSAT---ASLAFDILAKGGKLVLVG  274 (350)
T ss_pred             cEEecCCCc---cHHHHHHHHhCCCCcEEEECCCCHHH---HHHHHHHhhcCCeEEEEC
Confidence            999987653   45555555433 799999999864 6   899999999999999887

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.53  E-value=1.7e-13  Score=149.74  Aligned_cols=131  Identities=15%  Similarity=0.002  Sum_probs=110.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.++++++++++|||+++ ..+.+ ++|++|+|+|+ |++|++++|+||++|+ +|+++++++++.+.++++++
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~-~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~  230 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAA-ELAEV-KPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG  230 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHH-hhccC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence            556789999999999999999998 67777 89999999976 9999999999999998 59999999999999999855


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-------------------hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-------------------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-------------------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..++++...  +++.+.+.+.+.  ++|+|+|++|++                   ....++.++++++++|+++.++
T Consensus       231 ~~vi~~~~~--~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g  306 (386)
T cd08283         231 AETINFEEV--DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIG  306 (386)
T ss_pred             cEEEcCCcc--hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEc
Confidence            578887653  136677766643  799999999863                   1123788999999999999987

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=99.52  E-value=2e-13  Score=147.91  Aligned_cols=128  Identities=17%  Similarity=0.016  Sum_probs=111.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++++++++.||+.++...+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|.+.++++|+
T Consensus       155 iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~-~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~  232 (365)
T cd08278         155 VDKDVPLELLAPLGCGIQTGAGAVLNVLKP-RPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA  232 (365)
T ss_pred             CCCCCCHHHhhhhcchhhhhhHHHhhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCC
Confidence            456788999999999999999998877888 89999999976 9999999999999999 68999999999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++...   ++.+.+.+.+ .++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       233 ~~~i~~~~~---~~~~~v~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g  285 (365)
T cd08278         233 THVINPKEE---DLVAAIREITGGGVDYALDTTGVPAV---IEQAVDALAPRGTLALVG  285 (365)
T ss_pred             cEEecCCCc---CHHHHHHHHhCCCCcEEEECCCCcHH---HHHHHHHhccCCEEEEeC
Confidence            999998764   4555555443 4899999999875 5   789999999999999987

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH)

Probab=99.52  E-value=3.3e-14  Score=124.25  Aligned_cols=69  Identities=42%  Similarity=0.614  Sum_probs=64.3

Q ss_pred             CCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHcc
Q psy14589        258 FSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSS  327 (655)
Q Consensus       258 ~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~  327 (655)
                      ..++++++|++++ +||+|+++|+.|++++|||++|||||++...|+|.|||||+|  ++.+++++++|++.
T Consensus        11 ~~~ktslif~l~~-~pGsL~~vL~~Fa~~~INLt~IeSRP~~~~~~~Y~FfVDieg~~~~~~~~~l~~L~~~   81 (90)
T cd04931          11 KNGVISLIFSLKE-EVGALAKVLRLFEEKDINLTHIESRPSRLNKDEYEFFINLDKKSAPALDPIIKSLRND   81 (90)
T ss_pred             CCCcEEEEEEcCC-CCcHHHHHHHHHHHCCCCEEEEEeccCCCCCceEEEEEEEEcCCCHHHHHHHHHHHHH
Confidence            3458999999998 899999999999999999999999999999999999999999  77899999999873

ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.52  E-value=1.4e-13  Score=144.79  Aligned_cols=129  Identities=16%  Similarity=0.081  Sum_probs=114.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|||+++...+.+ .+|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       107 lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~-~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  185 (323)
T cd05282         107 VPDSISDEQAAMLYINPLTAWLMLTEYLKL-PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGAD  185 (323)
T ss_pred             CCCCCCHHHHHHHhccHHHHHHHHHHhccC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCC
Confidence            456778889999999999999998877777 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++...   ++.+.+.+.+  .++|+++|++|+..   ...++++++++|+++.+|
T Consensus       186 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~g~~~---~~~~~~~l~~~g~~v~~g  237 (323)
T cd05282         186 EVIDSSPE---DLAQRVKEATGGAGARLALDAVGGES---ATRLARSLRPGGTLVNYG  237 (323)
T ss_pred             EEecccch---hHHHHHHHHhcCCCceEEEECCCCHH---HHHHHHhhCCCCEEEEEc
Confidence            99998753   4666666654  37999999999887   778899999999999987

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.52  E-value=1.9e-13  Score=145.11  Aligned_cols=124  Identities=20%  Similarity=0.212  Sum_probs=108.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++.++++..|||+++... .+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++ ++
T Consensus       132 lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~-~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~  208 (334)
T PRK13771        132 VPPNVSDEGAVIVPCVTGMVYRGLRRA-GV-KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-AD  208 (334)
T ss_pred             CCCCCCHHHhhcccchHHHHHHHHHhc-CC-CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HH
Confidence            456778899999999999999998766 77 8999999999999999999999999999999999999999999888 88


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++.     ++.+.+++.+ ++|+++|++|+..   ...++++++++|+++.+|
T Consensus       209 ~~~~~~-----~~~~~v~~~~-~~d~~ld~~g~~~---~~~~~~~l~~~G~~v~~g  255 (334)
T PRK13771        209 YVIVGS-----KFSEEVKKIG-GADIVIETVGTPT---LEESLRSLNMGGKIIQIG  255 (334)
T ss_pred             HhcCch-----hHHHHHHhcC-CCcEEEEcCChHH---HHHHHHHHhcCCEEEEEe
Confidence            887754     2344455543 7999999999887   899999999999999998

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.52  E-value=2.1e-13  Score=144.37  Aligned_cols=129  Identities=17%  Similarity=0.085  Sum_probs=115.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++++++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++++.++++|++
T Consensus       109 lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~-~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~  187 (327)
T PRK10754        109 LPDAISFEQAAASFLKGLTVYYLLRKTYEI-KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAW  187 (327)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCC
Confidence            456788999999999999999998877888 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++.+.+++.++  ++|+++|++|+..   ...++++++++|+++.+|
T Consensus       188 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g  239 (327)
T PRK10754        188 QVINYREE---NIVERVKEITGGKKVRVVYDSVGKDT---WEASLDCLQRRGLMVSFG  239 (327)
T ss_pred             EEEcCCCC---cHHHHHHHHcCCCCeEEEEECCcHHH---HHHHHHHhccCCEEEEEc
Confidence            99987654   56666666543  7999999999877   888999999999999997

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=99.52  E-value=1.7e-13  Score=145.73  Aligned_cols=127  Identities=20%  Similarity=0.098  Sum_probs=109.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC-CCCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK-PLYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~-~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++++++++++++.|||+++... ..+ .+|++|+|+|+ |++|++++|+||++| ++|+++++++++.+.++++|
T Consensus       135 ~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~-~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g  212 (340)
T cd05284         135 LPRGLDPVEAAPLADAGLTAYHAVKKALPYL-DPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLG  212 (340)
T ss_pred             CCCCCCHHHhhhhcchHHHHHHHHHHhcccC-CCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhC
Confidence            456778999999999999999998765 456 78999999996 779999999999999 79999999999999999999


Q ss_pred             CcEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++++++..    ++.+.+.+..  .++|+++|++|+. .   .+.++++++++|+++.++
T Consensus       213 ~~~~~~~~~----~~~~~i~~~~~~~~~dvvld~~g~~~~---~~~~~~~l~~~g~~i~~g  266 (340)
T cd05284         213 ADHVLNASD----DVVEEVRELTGGRGADAVIDFVGSDET---LALAAKLLAKGGRYVIVG  266 (340)
T ss_pred             CcEEEcCCc----cHHHHHHHHhCCCCCCEEEEcCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence            999998775    3555666553  2799999999974 6   789999999999999987

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.51  E-value=1.5e-13  Score=144.91  Aligned_cols=129  Identities=16%  Similarity=0.094  Sum_probs=108.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++.+++++++++.|||+++...  ......|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|
T Consensus       112 ~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g  191 (326)
T cd08289         112 LPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLG  191 (326)
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcC
Confidence            456788999999999999999887432  222145889999999999999999999999999999999999999999999


Q ss_pred             CcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++++.+.    ..+.+.+.+ +++|+++|++|+..   ++.++++++++|+++.+|
T Consensus       192 ~~~v~~~~~~----~~~~~~~~~~~~~d~vld~~g~~~---~~~~~~~l~~~G~~i~~g  243 (326)
T cd08289         192 AKEVIPREEL----QEESIKPLEKQRWAGAVDPVGGKT---LAYLLSTLQYGGSVAVSG  243 (326)
T ss_pred             CCEEEcchhH----HHHHHHhhccCCcCEEEECCcHHH---HHHHHHHhhcCCEEEEEe
Confidence            9999987642    233344443 37999999999877   899999999999999998

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.51  E-value=2.4e-13  Score=144.87  Aligned_cols=126  Identities=18%  Similarity=0.102  Sum_probs=107.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++++++++++++.|||+++.. ..+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|.+.++++|+
T Consensus       137 ~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~-~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~  213 (344)
T cd08284         137 LPDGLSDEAALLLGDILPTGYFGAKR-AQV-RPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGA  213 (344)
T ss_pred             CCCCCCHHHhhhhcCchHHHHhhhHh-cCC-ccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCC
Confidence            45678899999999999999999865 667 89999999975 9999999999999997 89999888899999999998


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      + ++++...   ++.+.+.+..  +++|+++|++|+. .   +..++++++++|++|.+|
T Consensus       214 ~-~~~~~~~---~~~~~l~~~~~~~~~dvvid~~~~~~~---~~~~~~~l~~~g~~v~~g  266 (344)
T cd08284         214 E-PINFEDA---EPVERVREATEGRGADVVLEAVGGAAA---LDLAFDLVRPGGVISSVG  266 (344)
T ss_pred             e-EEecCCc---CHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHhcccCCEEEEEC
Confidence            6 4666543   4666666653  3799999999975 6   889999999999999987

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.51  E-value=4e-13  Score=143.33  Aligned_cols=126  Identities=21%  Similarity=0.135  Sum_probs=105.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|||+++ ....+ ++|++|+|+|++|++|++++|+||++|++|++++.++ +++.++++|++
T Consensus       147 ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~  223 (350)
T cd08274         147 VNSPLSDVELATFPCSYSTAENML-ERAGV-GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGAD  223 (350)
T ss_pred             CCCCCCHHHHHhcccHHHHHHHHH-hhcCC-CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCe
Confidence            456778999999999999999998 56677 8999999999999999999999999999999888665 88888999998


Q ss_pred             EEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSY-GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ...+ .... ..++|+++|++|+..   ++.++++++++|+++.+|
T Consensus       224 ~~~~~~~~---~~~~-~~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~~v~~g  273 (350)
T cd08274         224 TVILRDAP---LLAD-AKALGGEPVDVVADVVGGPL---FPDLLRLLRPGGRYVTAG  273 (350)
T ss_pred             EEEeCCCc---cHHH-HHhhCCCCCcEEEecCCHHH---HHHHHHHhccCCEEEEec
Confidence            77665442   2223 2222 238999999999877   899999999999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.51  E-value=1.8e-13  Score=146.14  Aligned_cols=128  Identities=19%  Similarity=0.139  Sum_probs=112.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++++.++++++++++.|||+++.+.+.+ .+|++|+|+| +|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       134 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~  211 (345)
T cd08260         134 LPDDVDFVTAAGLGCRFATAFRALVHQARV-KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAV  211 (345)
T ss_pred             CCCCCCHHHhhhhccchHHHHHHHHHccCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCC
Confidence            456778889999999999999998777777 8999999999 59999999999999999999999999999999999999


Q ss_pred             EEEeCCc-cchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTI-RELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~-~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++++. .   ++.+.+.+.+. ++|+++|++|+. .   ...++++++++|+++.+|
T Consensus       212 ~~i~~~~~~---~~~~~~~~~~~~~~d~vi~~~g~~~~---~~~~~~~l~~~g~~i~~g  264 (345)
T cd08260         212 ATVNASEVE---DVAAAVRDLTGGGAHVSVDALGIPET---CRNSVASLRKRGRHVQVG  264 (345)
T ss_pred             EEEccccch---hHHHHHHHHhCCCCCEEEEcCCCHHH---HHHHHHHhhcCCEEEEeC
Confidence            9999875 3   56666665543 799999999964 6   789999999999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.51  E-value=6.1e-14  Score=129.08  Aligned_cols=86  Identities=27%  Similarity=0.210  Sum_probs=80.3

Q ss_pred             chHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCc-chHHHHHH
Q psy14589        122 GNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTD-PVYRARRK  198 (655)
Q Consensus       122 gVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~-~~~~~l~~  198 (655)
                      |||++++|+||++|++|++++++++|++.++++||++++|+++.   ++.+.+++.++  ++|+||||+|+ +.   ++.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~---~~~~~i~~~~~~~~~d~vid~~g~~~~---~~~   74 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDD---DFVEQIRELTGGRGVDVVIDCVGSGDT---LQE   74 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTS---SHHHHHHHHTTTSSEEEEEESSSSHHH---HHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhccccccccccc---ccccccccccccccceEEEEecCcHHH---HHH
Confidence            69999999999999999999999999999999999999999885   68889998865  79999999994 47   999


Q ss_pred             HHHHhccccceEEEe
Q psy14589        199 YFADLAFNYKHFFFF  213 (655)
Q Consensus       199 ~l~~l~~gGrlv~v~  213 (655)
                      ++++++++|+++++|
T Consensus        75 ~~~~l~~~G~~v~vg   89 (130)
T PF00107_consen   75 AIKLLRPGGRIVVVG   89 (130)
T ss_dssp             HHHHEEEEEEEEEES
T ss_pred             HHHHhccCCEEEEEE
Confidence            999999999999998

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.51  E-value=7e-13  Score=141.29  Aligned_cols=128  Identities=20%  Similarity=0.065  Sum_probs=112.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++.+.|||+++... .+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       135 lp~~~~~~~~a~l~~~~~ta~~~~~~~-~~-~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  212 (341)
T cd08297         135 IPDGLSFEQAAPLLCAGVTVYKALKKA-GL-KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGAD  212 (341)
T ss_pred             CCCCCCHHHHHHHHcchHHHHHHHHhc-CC-CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCc
Confidence            456788999999999999999998664 67 8999999999988899999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++.+.   ++.+.+.+.+  +++|+++|+.++. .   ++.++++++++|+++.+|
T Consensus       213 ~v~~~~~~---~~~~~~~~~~~~~~vd~vl~~~~~~~~---~~~~~~~l~~~g~~v~~g  265 (341)
T cd08297         213 AFVDFKKS---DDVEAVKELTGGGGAHAVVVTAVSAAA---YEQALDYLRPGGTLVCVG  265 (341)
T ss_pred             EEEcCCCc---cHHHHHHHHhcCCCCCEEEEcCCchHH---HHHHHHHhhcCCEEEEec
Confidence            99998764   5666676654  3899999977654 6   889999999999999987

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.50  E-value=3.7e-13  Score=141.99  Aligned_cols=130  Identities=15%  Similarity=0.093  Sum_probs=114.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++.+..+++++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++++++++++++.+.++++|++
T Consensus       109 ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~-~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  187 (334)
T PTZ00354        109 IPQGYTFEEAAAIPEAFLTAWQLLKKHGDV-KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAI  187 (334)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc
Confidence            456778889999999999999998877777 8999999999999999999999999999988898999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++...  +++.+.+.+.+  .++|+++|++|+..   +..++++++++|+++.++
T Consensus       188 ~~~~~~~~--~~~~~~~~~~~~~~~~d~~i~~~~~~~---~~~~~~~l~~~g~~i~~~  240 (334)
T PTZ00354        188 ILIRYPDE--EGFAPKVKKLTGEKGVNLVLDCVGGSY---LSETAEVLAVDGKWIVYG  240 (334)
T ss_pred             EEEecCCh--hHHHHHHHHHhCCCCceEEEECCchHH---HHHHHHHhccCCeEEEEe
Confidence            99987653  12566666654  37999999999877   889999999999999987

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=99.50  E-value=3.6e-13  Score=145.90  Aligned_cols=130  Identities=15%  Similarity=0.033  Sum_probs=110.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++++++++++++.|||+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|++ |++++++++|.+.++++|+
T Consensus       152 lP~~~~~~~a~~~~~~~~ta~~al~~~~~~-~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~  229 (365)
T cd05279         152 IDPDAPLEKVCLIGCGFSTGYGAAVNTAKV-TPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGA  229 (365)
T ss_pred             CCCCCCHHHhhHhccchhHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC
Confidence            456778899999999999999998888888 89999999975 99999999999999995 7788889999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCc-chHHHHHHHHHHhc-cccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG-SELDADHPGFTD-PVYRARRKYFADLA-FNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~-~~~~~l~~~l~~l~-~gGrlv~v~  213 (655)
                      ++++++.+.+ .++.+.+++.+ +++|+++|++|. ..   +..++++++ ++|+++.+|
T Consensus       230 ~~~v~~~~~~-~~~~~~l~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g  285 (365)
T cd05279         230 TECINPRDQD-KPIVEVLTEMTDGGVDYAFEVIGSADT---LKQALDATRLGGGTSVVVG  285 (365)
T ss_pred             Ceeccccccc-chHHHHHHHHhCCCCcEEEECCCCHHH---HHHHHHHhccCCCEEEEEe
Confidence            9999876531 13445555543 489999999986 46   889999999 999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.50  E-value=3.3e-13  Score=142.61  Aligned_cols=129  Identities=16%  Similarity=0.065  Sum_probs=110.7

Q ss_pred             CCCCCC--HHhHhh-hhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-
Q psy14589         78 LLSSRD--FLAGLA-FRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-  153 (655)
Q Consensus        78 l~~~~s--~~eAAa-l~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-  153 (655)
                      ++++++  +.++++ +++++.|||+++.+.+.+ .+|++|+|+|++|++|++++|+||++|++|+++++++++.+.+++ 
T Consensus       111 lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~  189 (329)
T cd05288         111 LDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKP-KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE  189 (329)
T ss_pred             CCcccCCCHHHHHHhcccHHHHHHHHHHhccCC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh
Confidence            344553  445555 999999999999877777 899999999999999999999999999999999999999999988 


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++++++.+.   ++.+.+.+.. +++|+++|++|+..   ++.++++++++|+++.+|
T Consensus       190 ~g~~~~~~~~~~---~~~~~v~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~~v~~g  244 (329)
T cd05288         190 LGFDAAINYKTP---DLAEALKEAAPDGIDVYFDNVGGEI---LDAALTLLNKGGRIALCG  244 (329)
T ss_pred             cCCceEEecCCh---hHHHHHHHhccCCceEEEEcchHHH---HHHHHHhcCCCceEEEEe
Confidence            999999998764   4666666554 47999999999877   899999999999999987

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=99.50  E-value=2.7e-13  Score=146.57  Aligned_cols=128  Identities=21%  Similarity=0.154  Sum_probs=113.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++++++++.|||+++...+.+ ++|++|+|+| +|++|++++|+||++|++ |+++++++++.+.++++|+
T Consensus       156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~-~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~  233 (367)
T cd08263         156 LPESLDYTESAVLGCAGFTAYGALKHAADV-RPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGA  233 (367)
T ss_pred             CCCCCCHHHHhHhcchHHHHHHHHHhcccC-CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC
Confidence            556788999999999999999999887777 8999999996 599999999999999997 9989899999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++...   ++.+.+++..  .++|+++|++|+. .   ...++++++++|+++.++
T Consensus       234 ~~v~~~~~~---~~~~~l~~~~~~~~~d~vld~vg~~~~---~~~~~~~l~~~G~~v~~g  287 (367)
T cd08263         234 THTVNAAKE---DAVAAIREITGGRGVDVVVEALGKPET---FKLALDVVRDGGRAVVVG  287 (367)
T ss_pred             ceEecCCcc---cHHHHHHHHhCCCCCCEEEEeCCCHHH---HHHHHHHHhcCCEEEEEc
Confidence            999998764   5666666553  3799999999987 6   889999999999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.49  E-value=3.7e-13  Score=145.43  Aligned_cols=181  Identities=15%  Similarity=0.061  Sum_probs=133.2

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCC-----CCCCCCcc--ccccc-ccccCCcE---Eeec---CCCCCCCCHHhHhhh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYA-----EDNIPQLE--DISKF-LKDSTGFS---LRPV---AGLLSSRDFLAGLAF   90 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~-----~~~iP~le--~V~~~-l~~~~g~~---~~~v---~~l~~~~s~~eAAal   90 (655)
                      .++.+.+.|..|+.+++.+|+.+-+.     .+.+.+.-  +.... .....+|+   .++.   ..+++++++++++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~  163 (363)
T cd08279          84 SWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALL  163 (363)
T ss_pred             CCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehh
Confidence            34556788899999988777654210     00000000  00000 00112232   2221   234567788999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      +++..|||+++.....+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++|+++++++...   +
T Consensus       164 ~~~~~ta~~~~~~~~~~-~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~---~  238 (363)
T cd08279         164 GCGVTTGVGAVVNTARV-RPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED---D  238 (363)
T ss_pred             cchhHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc---c
Confidence            99999999998877888 89999999965 99999999999999996 9999999999999999999999988764   5


Q ss_pred             HHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        170 FANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +...+.+..  .++|+++|++|+. .   +..++++++++|+++.++
T Consensus       239 ~~~~l~~~~~~~~vd~vld~~~~~~~---~~~~~~~l~~~G~~v~~g  282 (363)
T cd08279         239 AVEAVRDLTDGRGADYAFEAVGRAAT---IRQALAMTRKGGTAVVVG  282 (363)
T ss_pred             HHHHHHHHcCCCCCCEEEEcCCChHH---HHHHHHHhhcCCeEEEEe
Confidence            666666654  3799999999954 5   789999999999999987

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=99.49  E-value=2.4e-13  Score=143.72  Aligned_cols=162  Identities=18%  Similarity=0.136  Sum_probs=121.8

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eee---cCCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRP---VAGLLSSRDFLAGLAFRVFHSTQYI   99 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~---v~~l~~~~s~~eAAal~~a~~TA~~   99 (655)
                      +.+++..|..|..|...+|+...+     +++.       ...+|.   .++   +..++++++++++++++++..|||+
T Consensus        86 ~~~~~~~c~~~~~~~~~~~~~~~~-----~~~~-------~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~  153 (325)
T cd08264          86 NRVFDGTCDMCLSGNEMLCRNGGI-----IGVV-------SNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYH  153 (325)
T ss_pred             CCcCCCCChhhcCCCccccCccce-----eecc-------CCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHH
Confidence            344567788888887666654332     1110       111222   222   1234567889999999999999999


Q ss_pred             HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589        100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      ++.. ..+ ++|++|+|+|++|++|++++|+||++|++|+++++    .+.++++|+++++++.+     ..+.+++.++
T Consensus       154 ~l~~-~~~-~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~~  222 (325)
T cd08264         154 ALKT-AGL-GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE-----VEEKVKEITK  222 (325)
T ss_pred             HHHh-cCC-CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH-----HHHHHHHHhC
Confidence            9865 777 89999999999999999999999999999988863    36678899999998653     2333443335


Q ss_pred             CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+|+|++|+..   +..++++++++|+++.++
T Consensus       223 ~~d~vl~~~g~~~---~~~~~~~l~~~g~~v~~g  253 (325)
T cd08264         223 MADVVINSLGSSF---WDLSLSVLGRGGRLVTFG  253 (325)
T ss_pred             CCCEEEECCCHHH---HHHHHHhhccCCEEEEEe
Confidence            7999999999877   899999999999999987

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.49  E-value=3.1e-13  Score=144.60  Aligned_cols=129  Identities=19%  Similarity=0.063  Sum_probs=107.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++.+ +++.||++++ ..+.+ ++|++|+|.|+ |++|++++|+||++|++ |+++++++++.+.++++|+
T Consensus       133 lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~-~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~  208 (343)
T cd05285         133 LPDNVSLEEGALV-EPLSVGVHAC-RRAGV-RPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGA  208 (343)
T ss_pred             CcCCCCHHHhhhh-hHHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCC
Confidence            4567788888766 6889999997 67788 89999999876 99999999999999997 8999889999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+...+++.+.+.+.++  ++|+++|++|+. .   +..++++++++|+++.++
T Consensus       209 ~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g  265 (343)
T cd05285         209 THTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESC---IQTAIYATRPGGTVVLVG  265 (343)
T ss_pred             cEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence            99999876411113556665533  699999999986 6   889999999999999887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>KOG0025|consensus

Probab=99.49  E-value=8.7e-13  Score=135.10  Aligned_cols=124  Identities=17%  Similarity=0.131  Sum_probs=105.1

Q ss_pred             CCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCC
Q psy14589         81 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGA  156 (655)
Q Consensus        81 ~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGA  156 (655)
                      ..+.+.||++...++|||.+|.+..++ .+||+|.-+||+++||.+.+|+||++|.+.|.++|+....+.+    +.+||
T Consensus       132 ~~pl~~AAT~~VNP~TAyrmL~dfv~L-~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA  210 (354)
T KOG0025|consen  132 DIPLASAATLSVNPCTAYRMLKDFVQL-NKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGA  210 (354)
T ss_pred             cCChhhhheeccCchHHHHHHHHHHhc-CCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCC
Confidence            467999999999999999999999999 9999999999999999999999999999999999987655544    67999


Q ss_pred             cEEEeCCccchhHHH-HHHHhc---CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFA-NQILSY---GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~-~~i~~~---~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+||...+     +. ....+.   ..++.+.++||||..   .....+.|.+||.+|.+|
T Consensus       211 ~~ViTeee-----l~~~~~~k~~~~~~~prLalNcVGGks---a~~iar~L~~GgtmvTYG  263 (354)
T KOG0025|consen  211 TEVITEEE-----LRDRKMKKFKGDNPRPRLALNCVGGKS---ATEIARYLERGGTMVTYG  263 (354)
T ss_pred             ceEecHHH-----hcchhhhhhhccCCCceEEEeccCchh---HHHHHHHHhcCceEEEec
Confidence            99996432     21 111111   237899999999998   788899999999999998

>PRK10083 putative oxidoreductase; Provisional

Probab=99.49  E-value=1.8e-13  Score=145.67  Aligned_cols=126  Identities=15%  Similarity=0.087  Sum_probs=102.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHH-cCCe-EEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLT-VFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~-Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++.++ ++.+++.|+|++. +...+ ++|++|+|+| +|++|++++|+||+ +|++ |++++++++|.+.++++|
T Consensus       131 ip~~~~~~~a-~~~~~~~~a~~~~-~~~~~-~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~G  206 (339)
T PRK10083        131 IPDAIADQYA-VMVEPFTIAANVT-GRTGP-TEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESG  206 (339)
T ss_pred             CcCCCCHHHH-hhhchHHHHHHHH-HhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhC
Confidence            4566777665 4678888888644 56677 8999999999 49999999999997 6995 777888899999999999


Q ss_pred             CcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++|+.+.   ++.+.+...+.++|+++|++|++ .   +..++++++++|+++.+|
T Consensus       207 a~~~i~~~~~---~~~~~~~~~g~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g  259 (339)
T PRK10083        207 ADWVINNAQE---PLGEALEEKGIKPTLIIDAACHPSI---LEEAVTLASPAARIVLMG  259 (339)
T ss_pred             CcEEecCccc---cHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence            9999998763   45555544333568999999965 6   899999999999999998

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.48  E-value=3.7e-13  Score=143.24  Aligned_cols=132  Identities=17%  Similarity=0.010  Sum_probs=111.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHHHHh
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAKAYG  153 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~a~~  153 (655)
                      ++++++++++++++++..|||+++...+.+ ++|++|+|+|++|++|++++|+|+++|++|+++++++    ++.+.+++
T Consensus       115 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~  193 (341)
T cd08290         115 VPNDVDPEQAATLSVNPCTAYRLLEDFVKL-QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKA  193 (341)
T ss_pred             CCCCCCHHHHHHhhccHHHHHHHHHhhccc-CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHh
Confidence            456788999999999999999999777777 8999999999999999999999999999998888775    66788899


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++++++......++.+.+...++ ++|+++|++|+..   ...++++++++|+++.++
T Consensus       194 ~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~---~~~~~~~l~~~G~~v~~g  251 (341)
T cd08290         194 LGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS---ATELARLLSPGGTMVTYG  251 (341)
T ss_pred             cCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh---HHHHHHHhCCCCEEEEEe
Confidence            99999998765200034555555443 7999999999887   778999999999999987

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.48  E-value=1.3e-12  Score=137.71  Aligned_cols=125  Identities=23%  Similarity=0.247  Sum_probs=108.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++++++++++.|||+++.. ..+ ++|++|+|+|++|++|++++++++.+|++|+++++++++.+.++++|++
T Consensus       132 ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~-~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~  209 (332)
T cd08259         132 LPDNVSDESAALAACVVGTAVHALKR-AGV-KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGAD  209 (332)
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHH-hCC-CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCc
Confidence            45677889999999999999999877 777 8999999999999999999999999999999999999998889999998


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++..     ++.+.+.+.+ ++|++++++|+..   ...++++++++|+++.++
T Consensus       210 ~~~~~~-----~~~~~~~~~~-~~d~v~~~~g~~~---~~~~~~~~~~~g~~v~~g  256 (332)
T cd08259         210 YVIDGS-----KFSEDVKKLG-GADVVIELVGSPT---IEESLRSLNKGGRLVLIG  256 (332)
T ss_pred             EEEecH-----HHHHHHHhcc-CCCEEEECCChHH---HHHHHHHhhcCCEEEEEc
Confidence            888653     2344454444 7999999999887   889999999999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=99.48  E-value=3.4e-13  Score=144.91  Aligned_cols=121  Identities=11%  Similarity=-0.037  Sum_probs=94.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHH-cC-CeEEEEecChHHHHHHHh
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKA-YG-LTVFASVGCPVGVAKAYG  153 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~G-a~Viat~~s~~k~~~a~~  153 (655)
                      +++++++++ |++.++.+|+|+++...  ..+ ++||+|+|.|+ |+||++++|+||+ +| ++|++++++++|++.+++
T Consensus       131 vP~~l~~~~-aa~~~~~~~a~~a~~~~~~~~~-~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~  207 (341)
T cd08237         131 LPDNVDPEV-AAFTELVSVGVHAISRFEQIAH-KDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF  207 (341)
T ss_pred             CCCCCChHH-hhhhchHHHHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh
Confidence            456778765 45778999999998542  345 78999999997 9999999999986 66 489999999999999988


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .|++.+++       ++.+.     .++|+|+|++|+. ....++.++++++++|+++++|
T Consensus       208 ~~~~~~~~-------~~~~~-----~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G  256 (341)
T cd08237         208 ADETYLID-------DIPED-----LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMG  256 (341)
T ss_pred             cCceeehh-------hhhhc-----cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEe
Confidence            77765432       12211     1699999999963 1123899999999999999998

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.48  E-value=1.3e-12  Score=137.45  Aligned_cols=169  Identities=21%  Similarity=0.229  Sum_probs=129.5

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eee---cCCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRP---VAGLLSSRDFLAGLAFRVFHSTQYI   99 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~---v~~l~~~~s~~eAAal~~a~~TA~~   99 (655)
                      +.++...|.+|..+..++|...++-...            ...+|+   .++   +..+++++++.+++.++++..||++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~  156 (342)
T cd08266          89 PGISCGRCEYCLAGRENLCAQYGILGEH------------VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWH  156 (342)
T ss_pred             cccccccchhhccccccccccccccccc------------cCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHH
Confidence            3445667888888876666543321000            011222   222   1224567788899999999999999


Q ss_pred             HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-
Q psy14589        100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-  178 (655)
Q Consensus       100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-  178 (655)
                      ++.+...+ .+|++|+|+|+++++|++++++++++|++|+++++++++.+.++..|++.+++..+.   +..+.+.+.. 
T Consensus       157 ~l~~~~~~-~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  232 (342)
T cd08266         157 MLVTRARL-RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKE---DFVREVRELTG  232 (342)
T ss_pred             HHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCCh---HHHHHHHHHhC
Confidence            98777777 899999999999999999999999999999999999999999999999888887653   4445555443 


Q ss_pred             -CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        179 -SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 -~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       .++|++++++|+..   ++.++++++++|+++.++
T Consensus       233 ~~~~d~~i~~~g~~~---~~~~~~~l~~~G~~v~~~  265 (342)
T cd08266         233 KRGVDVVVEHVGAAT---WEKSLKSLARGGRLVTCG  265 (342)
T ss_pred             CCCCcEEEECCcHHH---HHHHHHHhhcCCEEEEEe
Confidence             37999999999877   889999999999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.48  E-value=6.4e-13  Score=139.73  Aligned_cols=128  Identities=23%  Similarity=0.204  Sum_probs=111.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.||| ++...+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       112 lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~-~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~  189 (324)
T cd08244         112 VPDGLDLEAAVAVVHDGRTAL-GLLDLATL-TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGAD  189 (324)
T ss_pred             CCCCCCHHHHhhhcchHHHHH-HHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC
Confidence            456788999999999999995 55566777 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++.+.   ++.+.+.+..+  ++|+++|++|+..   ...++++++++|+++.++
T Consensus       190 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~g~~~---~~~~~~~l~~~g~~v~~g  241 (324)
T cd08244         190 VAVDYTRP---DWPDQVREALGGGGVTVVLDGVGGAI---GRAALALLAPGGRFLTYG  241 (324)
T ss_pred             EEEecCCc---cHHHHHHHHcCCCCceEEEECCChHh---HHHHHHHhccCcEEEEEe
Confidence            99987764   45566665532  7999999999887   789999999999999997

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=99.48  E-value=7.1e-13  Score=146.09  Aligned_cols=178  Identities=12%  Similarity=0.018  Sum_probs=122.6

Q ss_pred             CCCCCCHHhHhhh-h--hHHHHHHHHh--------hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC---eEEEEec
Q psy14589         78 LLSSRDFLAGLAF-R--VFHSTQYIRH--------PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL---TVFASVG  143 (655)
Q Consensus        78 l~~~~s~~eAAal-~--~a~~TA~~aL--------~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga---~Viat~~  143 (655)
                      +++++++++++.+ +  ++ .+++.++        .+.+.+ ++|++|+|+|++|++|++++|+||++|+   +|+++++
T Consensus       134 lP~~l~~~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~-~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~  211 (410)
T cd08238         134 IYEGDGYAEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGI-KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDV  211 (410)
T ss_pred             CCCCCCHHHHhhcchHHHH-HHHhhhcccccccchhhhcCC-CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcC
Confidence            4567787777633 2  22 2344332        245677 8999999999889999999999999864   7999999


Q ss_pred             ChHHHHHHHhC--------CCc-EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEE
Q psy14589        144 CPVGVAKAYGL--------GAD-YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       144 s~~k~~~a~~L--------GAd-~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~  211 (655)
                      +++|++.++++        ||+ .++|+.+.  +++.+.+++.++  ++|+++|++|+. .   ++.++++++++|++++
T Consensus       212 ~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~--~~~~~~v~~~t~g~g~D~vid~~g~~~~---~~~a~~~l~~~G~~v~  286 (410)
T cd08238         212 NDERLARAQRLFPPEAASRGIELLYVNPATI--DDLHATLMELTGGQGFDDVFVFVPVPEL---VEEADTLLAPDGCLNF  286 (410)
T ss_pred             CHHHHHHHHHhccccccccCceEEEECCCcc--ccHHHHHHHHhCCCCCCEEEEcCCCHHH---HHHHHHHhccCCeEEE
Confidence            99999999997        887 57887542  156666766543  799999999865 6   8999999999999887


Q ss_pred             EeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCccee
Q psy14589        212 FFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLL  291 (655)
Q Consensus       212 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt  291 (655)
                      ++..  ..                          ..............+..++..+... ....+.++++.+++++|++.
T Consensus       287 ~~g~--~~--------------------------~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~li~~g~i~~~  337 (410)
T cd08238         287 FAGP--VD--------------------------KNFSAPLNFYNVHYNNTHYVGTSGG-NTDDMKEAIDLMAAGKLNPA  337 (410)
T ss_pred             EEcc--CC--------------------------CCccccccHHHhhhcCcEEEEeCCC-CHHHHHHHHHHHHcCCCchh
Confidence            6410  00                          0000000000011123456655544 45578999999999998864

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH)

Probab=99.46  E-value=1.7e-13  Score=115.36  Aligned_cols=72  Identities=33%  Similarity=0.529  Sum_probs=68.2

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---CchHHHHHHHHHccCCcEEEec
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GGDLSSVIESLRSSCSYINIIS  335 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~~v~~~l~~L~~~~~~v~iLG  335 (655)
                      ++.|++++ +||+|+++|+.|+++++||++|+|||.+...|+|.||||+++   +.++++++++|++.+..++++|
T Consensus         1 sl~~~l~d-~pG~L~~vL~~f~~~~vni~~I~Srp~~~~~~~~~f~id~~~~~~~~~~~~~l~~l~~~~~~~~~lG   75 (75)
T cd04880           1 SLVFSLKN-KPGALAKALKVFAERGINLTKIESRPSRKGLWEYEFFVDFEGHIDDPDVKEALEELKRVTEDVKVLG   75 (75)
T ss_pred             CEEEEeCC-cCCHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEEECCCCCHHHHHHHHHHHHhCCeeEECC
Confidence            47888988 899999999999999999999999999999999999999998   6789999999999999999987

ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.46  E-value=9.4e-13  Score=136.52  Aligned_cols=129  Identities=20%  Similarity=0.102  Sum_probs=114.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++.+..+++++++...|+++++.+.+.+ ++|++|+|+|++|++|++++++|+++|++|+++++++++.+.++++|++
T Consensus       105 ~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  183 (320)
T cd05286         105 LPDGISDETAAALLLQGLTAHYLLRETYPV-KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGAD  183 (320)
T ss_pred             CCCCCCHHHHhhccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCC
Confidence            456678889999999999999998877888 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++.+.+.+.+  .++|++++++|+..   ...++++++++|+++.++
T Consensus       184 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g  235 (320)
T cd05286         184 HVINYRDE---DFVERVREITGGRGVDVVYDGVGKDT---FEGSLDSLRPRGTLVSFG  235 (320)
T ss_pred             EEEeCCch---hHHHHHHHHcCCCCeeEEEECCCcHh---HHHHHHhhccCcEEEEEe
Confidence            99987653   4666666654  37999999999877   889999999999999987

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=99.46  E-value=1.6e-12  Score=137.73  Aligned_cols=159  Identities=16%  Similarity=0.032  Sum_probs=108.9

Q ss_pred             CCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCc
Q psy14589         79 LSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        79 ~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++ +++ .+++.|||+++.+ ..  .+|++|+|+|+ |+||++++|+||++|++ |++++.++++++.+++   +
T Consensus       118 p~~~~~~-~a~-~~~~~~a~~~~~~-~~--~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~  188 (308)
T TIGR01202       118 DPALGPQ-GAL-LALAATARHAVAG-AE--VKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---Y  188 (308)
T ss_pred             CCCCCHH-HHh-hhHHHHHHHHHHh-cc--cCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---c
Confidence            3455654 444 4567999999865 33  46899999986 99999999999999997 5566666666665544   4


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhh
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFF  236 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~  236 (655)
                      .++|+.+    +       .+.++|+|+||+|++ .   ++.++++++++|+++++|..                     
T Consensus       189 ~~i~~~~----~-------~~~g~Dvvid~~G~~~~---~~~~~~~l~~~G~iv~~G~~---------------------  233 (308)
T TIGR01202       189 EVLDPEK----D-------PRRDYRAIYDASGDPSL---IDTLVRRLAKGGEIVLAGFY---------------------  233 (308)
T ss_pred             cccChhh----c-------cCCCCCEEEECCCCHHH---HHHHHHhhhcCcEEEEEeec---------------------
Confidence            5666532    1       133799999999986 6   79999999999999999831                     


Q ss_pred             hhhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceee
Q psy14589        237 FYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLH  292 (655)
Q Consensus       237 ~~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~  292 (655)
                               ..+. .........+..++..+... ....+.++++.++++++++.+
T Consensus       234 ---------~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~~g~i~~~~  278 (308)
T TIGR01202       234 ---------TEPV-NFDFVPAFMKEARLRIAAEW-QPGDLHAVRELIESGALSLDG  278 (308)
T ss_pred             ---------CCCc-ccccchhhhcceEEEEeccc-chhHHHHHHHHHHcCCCChhh
Confidence                     0000 00000011123445544443 355789999999999998653

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.46  E-value=2.2e-12  Score=137.75  Aligned_cols=116  Identities=16%  Similarity=0.039  Sum_probs=98.4

Q ss_pred             hhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccch
Q psy14589         89 AFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIREL  167 (655)
Q Consensus        89 al~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~  167 (655)
                      ++.+.+.||++++. ...+ ++|++|+|.| +|++|++++|+||++|++ |+++++++++.+.++++|++.++++...  
T Consensus       149 ~l~~~~~~a~~~~~-~~~~-~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~--  223 (345)
T cd08287         149 ALSDVMGTGHHAAV-SAGV-RPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGE--  223 (345)
T ss_pred             hhhcHHHHHHHHHH-hcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcc--
Confidence            34478899999984 5677 8999999977 599999999999999995 8888888888888999999999998764  


Q ss_pred             hHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        168 DRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       168 ~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       ++.+.+.+.++  ++|+++|++|++ .   ++.++++++++|+++.++
T Consensus       224 -~~~~~i~~~~~~~~~d~il~~~g~~~~---~~~~~~~l~~~g~~v~~g  268 (345)
T cd08287         224 -EAVARVRELTGGVGADAVLECVGTQES---MEQAIAIARPGGRVGYVG  268 (345)
T ss_pred             -cHHHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHhhccCCEEEEec
Confidence             56666766543  799999999875 5   899999999999999876

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.46  E-value=8.1e-13  Score=134.36  Aligned_cols=128  Identities=20%  Similarity=0.136  Sum_probs=110.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|||+++.....+ ++|++|+|+|+++ +|++++|+|+++|++|+++++++++.+.++++|++
T Consensus       103 ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~-~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  180 (271)
T cd05188         103 LPDGLSLEEAALLPEPLATAYHALRRAGVL-KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGAD  180 (271)
T ss_pred             CCCCCCHHHhhHhcCHHHHHHHHHHhccCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCc
Confidence            456778999999999999999999888877 7999999999966 99999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCc-chHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSY-GSELDADHPGFTD-PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~-~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++...   +..+.+... .+++|++++++|+ ..   ...++++++++|+++.++
T Consensus       181 ~~~~~~~~---~~~~~~~~~~~~~~d~vi~~~~~~~~---~~~~~~~l~~~G~~v~~~  232 (271)
T cd05188         181 HVIDYKEE---DLEEELRLTGGGGADVVIDAVGGPET---LAQALRLLRPGGRIVVVG  232 (271)
T ss_pred             eeccCCcC---CHHHHHHHhcCCCCCEEEECCCCHHH---HHHHHHhcccCCEEEEEc
Confidence            99987764   344444322 2379999999998 56   788999999999999987

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.45  E-value=1.9e-12  Score=137.85  Aligned_cols=126  Identities=17%  Similarity=0.073  Sum_probs=107.5

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++++++ .+..|+++++ ....+ ++|++|||+|+ |++|.+++|+|+.+|++|+++++++++.+.++++|++
T Consensus       130 ~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l-~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~  205 (337)
T cd08261         130 VPEGLSLDQAALV-EPLAIGAHAV-RRAGV-TAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGAD  205 (337)
T ss_pred             CCCCCCHHHhhhh-chHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCC
Confidence            4567788888776 6778898887 66777 89999999975 9999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++++.+.   ++.+.+.+..+  ++|+++|++|+. .   +..++++++++|+++.++
T Consensus       206 ~v~~~~~~---~~~~~l~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~G~~i~~g  258 (337)
T cd08261         206 DTINVGDE---DVAARLRELTDGEGADVVIDATGNPAS---MEEAVELVAHGGRVVLVG  258 (337)
T ss_pred             EEecCccc---CHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEc
Confidence            99998864   46666665533  699999999875 5   789999999999999886

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.45  E-value=1.2e-12  Score=137.79  Aligned_cols=128  Identities=15%  Similarity=0.053  Sum_probs=106.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCC--CCCC-CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKP--LYTP-EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~--~l~~-~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L  154 (655)
                      +++++++.+++++++++.|||+++....  .+ + .|++|+|+|++|++|++++|+||++|++|+++++++++++.++++
T Consensus       112 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~  190 (325)
T cd05280         112 LPEGLSLREAMILGTAGFTAALSVHRLEDNGQ-TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSL  190 (325)
T ss_pred             CCCCCCHHHHHhhHHHHHHHHHHHHHHhhccC-CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence            4567889999999999999999875432  33 3 467999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++.++++...    ..+..+... +++|+|+|++|+..   +..++++++++|+++.+|
T Consensus       191 g~~~~~~~~~~----~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g  243 (325)
T cd05280         191 GASEVLDREDL----LDESKKPLLKARWAGAIDTVGGDV---LANLLKQTKYGGVVASCG  243 (325)
T ss_pred             CCcEEEcchhH----HHHHHHHhcCCCccEEEECCchHH---HHHHHHhhcCCCEEEEEe
Confidence            99999986542    112222222 37999999999887   899999999999999988

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.45  E-value=4.5e-12  Score=135.40  Aligned_cols=124  Identities=19%  Similarity=0.083  Sum_probs=106.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.++++++++..|||+++... .+ ++|++|+|.|+ |++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       139 lp~~~~~~~aa~l~~~~~ta~~~~~~~-~~-~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~  215 (337)
T cd05283         139 IPEGLDSAAAAPLLCAGITVYSPLKRN-GV-GPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGAD  215 (337)
T ss_pred             CCCCCCHHHhhhhhhHHHHHHHHHHhc-CC-CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCc
Confidence            456788999999999999999998665 46 89999999775 9999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   +..   ....+++|+++|++|+. .   ...++++++++|+++.+|
T Consensus       216 ~vi~~~~~---~~~---~~~~~~~d~v~~~~g~~~~---~~~~~~~l~~~G~~v~~g  263 (337)
T cd05283         216 EFIATKDP---EAM---KKAAGSLDLIIDTVSASHD---LDPYLSLLKPGGTLVLVG  263 (337)
T ss_pred             EEecCcch---hhh---hhccCCceEEEECCCCcch---HHHHHHHhcCCCEEEEEe
Confidence            99987653   222   22234799999999987 5   789999999999999987

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.44  E-value=1.5e-12  Score=132.89  Aligned_cols=129  Identities=23%  Similarity=0.202  Sum_probs=113.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC--
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG--  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG--  155 (655)
                      ++++++..+++.++++..|+|+++.+...+ ++|++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++++|  
T Consensus        77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~  155 (293)
T cd05195          77 IPDSLSFEEAATLPVAYLTAYYALVDLARL-QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGP  155 (293)
T ss_pred             CCCCCCHHHHhhchHHHHHHHHHHHHHhcc-CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCC
Confidence            456778889999999999999998777788 89999999999999999999999999999999999989999999988  


Q ss_pred             CcEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++++...   ++.+.+.+.+  .++|+++|++|+..   .+.++++++++|+++.++
T Consensus       156 ~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g  209 (293)
T cd05195         156 VDHIFSSRDL---SFADGILRATGGRGVDVVLNSLSGEL---LRASWRCLAPFGRFVEIG  209 (293)
T ss_pred             cceEeecCch---hHHHHHHHHhCCCCceEEEeCCCchH---HHHHHHhcccCceEEEee
Confidence            7888987653   5666666653  37999999999887   899999999999999987

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08251 polyketide_synthase polyketide synthase

Probab=99.44  E-value=2e-12  Score=133.74  Aligned_cols=128  Identities=18%  Similarity=0.172  Sum_probs=112.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++.+++..+++++++++.|||+++. ...+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus        90 ~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~-~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  167 (303)
T cd08251          90 KPASLSFEEACALPVVFLTVIDAFA-RAGL-AKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVP  167 (303)
T ss_pred             CCCCCCHHHHHHhHHHHHHHHHHHH-hcCC-CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence            4567789999999999999999984 6777 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++...   ++.+.+.+.+  .++|+++|++++..   ...++++++++|+++.++
T Consensus       168 ~~~~~~~~---~~~~~i~~~~~~~~~d~v~~~~~~~~---~~~~~~~l~~~g~~v~~~  219 (303)
T cd08251         168 HVINYVEE---DFEEEIMRLTGGRGVDVVINTLSGEA---IQKGLNCLAPGGRYVEIA  219 (303)
T ss_pred             EEEeCCCc---cHHHHHHHHcCCCCceEEEECCcHHH---HHHHHHHhccCcEEEEEe
Confidence            99987764   4566666554  37999999998777   889999999999999886

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>smart00829 PKS_ER Enoylreductase

Probab=99.43  E-value=1.6e-12  Score=132.76  Aligned_cols=129  Identities=22%  Similarity=0.200  Sum_probs=113.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC-
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA-  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA-  156 (655)
                      +++++++.+++++++++.|+|+++.+...+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|+ 
T Consensus        73 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  151 (288)
T smart00829       73 IPDGLSFEEAATVPVVFLTAYYALVDLARL-RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIP  151 (288)
T ss_pred             CCCCCCHHHHHhchHHHHHHHHHHHHHhCC-CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            556788999999999999999998777777 899999999999999999999999999999999999999999999999 


Q ss_pred             -cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 -DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 -d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       +.++++...   ++.+.+.+..  .++|+++|++|+..   ...++++++++|+++.++
T Consensus       152 ~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g  205 (288)
T smart00829      152 DDHIFSSRDL---SFADEILRATGGRGVDVVLNSLAGEF---LDASLRCLAPGGRFVEIG  205 (288)
T ss_pred             hhheeeCCCc---cHHHHHHHHhCCCCcEEEEeCCCHHH---HHHHHHhccCCcEEEEEc
Confidence             888887654   4556666543  27999999999776   889999999999999987

Enoylreductase in Polyketide synthases.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.43  E-value=1.3e-12  Score=138.18  Aligned_cols=123  Identities=15%  Similarity=0.093  Sum_probs=107.8

Q ss_pred             HHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCC
Q psy14589         84 FLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT  163 (655)
Q Consensus        84 ~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~  163 (655)
                      ..+++++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+|+++|++|+++++++++.+.++++|++.+++..
T Consensus       114 ~~~~a~l~~~~~ta~~~l~~~~~~-~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~  192 (329)
T cd08250         114 KPEVLPLLVSGLTASIALEEVGEM-KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYK  192 (329)
T ss_pred             cchhhhcccHHHHHHHHHHHhcCC-CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCC
Confidence            457889999999999999877787 8999999999999999999999999999999999999999999999999999876


Q ss_pred             ccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        164 IRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       164 ~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..   ++.+.+.+.. +++|+++|++|+..   +..++++++++|+++.++
T Consensus       193 ~~---~~~~~~~~~~~~~vd~v~~~~g~~~---~~~~~~~l~~~g~~v~~g  237 (329)
T cd08250         193 TE---DLGEVLKKEYPKGVDVVYESVGGEM---FDTCVDNLALKGRLIVIG  237 (329)
T ss_pred             Cc---cHHHHHHHhcCCCCeEEEECCcHHH---HHHHHHHhccCCeEEEEe
Confidence            53   4445554433 37999999999877   899999999999999987

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.43  E-value=1.2e-12  Score=139.98  Aligned_cols=129  Identities=19%  Similarity=0.134  Sum_probs=110.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCC---------CCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLY---------TPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV  148 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l---------~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~  148 (655)
                      +++++++.+++++++++.|||+++.+...+         .++|++|+|+|++|++|++++|+||++|++|++++ +++|.
T Consensus       113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~  191 (339)
T cd08249         113 IPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNF  191 (339)
T ss_pred             CCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccH
Confidence            456788999999999999999998655432         15899999999999999999999999999999887 56888


Q ss_pred             HHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCc-chHHHHHHHHHHhcc--ccceEEEe
Q psy14589        149 AKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTD-PVYRARRKYFADLAF--NYKHFFFF  213 (655)
Q Consensus       149 ~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~-~~~~~l~~~l~~l~~--gGrlv~v~  213 (655)
                      +.++++|+++++++.+.   ++.+.+++.+ +++|+++|++|+ ..   +..+++++++  +|+++.++
T Consensus       192 ~~~~~~g~~~v~~~~~~---~~~~~l~~~~~~~~d~vl~~~g~~~~---~~~~~~~l~~~~~g~~v~~g  254 (339)
T cd08249         192 DLVKSLGADAVFDYHDP---DVVEDIRAATGGKLRYALDCISTPES---AQLCAEALGRSGGGKLVSLL  254 (339)
T ss_pred             HHHHhcCCCEEEECCCc---hHHHHHHHhcCCCeeEEEEeeccchH---HHHHHHHHhccCCCEEEEec
Confidence            99999999999998764   5666666554 389999999998 57   8999999999  99999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.43  E-value=1.6e-12  Score=137.21  Aligned_cols=127  Identities=17%  Similarity=0.065  Sum_probs=106.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCC-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPD-TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd-~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L  154 (655)
                      +++++++.+++++++++.||++++...  ..+ ++|+ +|+|+|++|++|++++|+|+++|++|+++++++++++.++++
T Consensus       111 iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~-~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~  189 (323)
T TIGR02823       111 LPEGLSLREAMALGTAGFTAALSVMALERNGL-TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKEL  189 (323)
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCC-CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhc
Confidence            456788999999999999999876432  336 7898 999999999999999999999999999998889999999999


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++.+++..+.   +.  .++... +++|+++|++|+..   +..++++++++|+++.+|
T Consensus       190 g~~~~~~~~~~---~~--~~~~~~~~~~d~vld~~g~~~---~~~~~~~l~~~G~~v~~g  241 (323)
T TIGR02823       190 GASEVIDREDL---SP--PGKPLEKERWAGAVDTVGGHT---LANVLAQLKYGGAVAACG  241 (323)
T ss_pred             CCcEEEccccH---HH--HHHHhcCCCceEEEECccHHH---HHHHHHHhCCCCEEEEEc
Confidence            99999986542   21  333332 26999999999887   899999999999999998

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.42  E-value=2.2e-12  Score=136.76  Aligned_cols=128  Identities=26%  Similarity=0.214  Sum_probs=110.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCC-----CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHH
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE-----PDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKA  151 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~-----Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a  151 (655)
                      ++++.+..++++++++..|||+++.+.+.+ .+     |++|+|+|++|++|++++|+|+++| ++|+++++++++.+.+
T Consensus       113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~-~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~  191 (336)
T cd08252         113 KPKSLSFAEAAALPLTSLTAWEALFDRLGI-SEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV  191 (336)
T ss_pred             CCCCCCHHHhhhhhhHHHHHHHHHHHhcCC-CCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Confidence            445678899999999999999998777777 66     9999999999999999999999999 8999999999999999


Q ss_pred             HhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        152 YGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       152 ~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|++.++++..    ++.+.+...+ +++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       192 ~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~---~~~~~~~l~~~g~~v~~g  248 (336)
T cd08252         192 KELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQH---WDAMAELIAPQGHICLIV  248 (336)
T ss_pred             HhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHH---HHHHHHHhcCCCEEEEec
Confidence            9999999998764    3444555444 3799999999964 6   889999999999999987

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.42  E-value=1.8e-12  Score=138.49  Aligned_cols=128  Identities=20%  Similarity=0.050  Sum_probs=110.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LGA  156 (655)
                      ++++++..++++++++++|||+++.....+ ++|++|+|.|+ |++|++++|+||++| .+|++++++++|.+.++++|+
T Consensus       135 lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~-~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~  212 (345)
T cd08286         135 LPEGVDEEAAVMLSDILPTGYECGVLNGKV-KPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGA  212 (345)
T ss_pred             CCCCCCHHHhhhccchhHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence            456778899999999999999987677777 89999999886 999999999999999 699999888899999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+.   ++...+.+.+  .++|+++|++|+. .   ++.++++++++|+++.+|
T Consensus       213 ~~~v~~~~~---~~~~~i~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~g~~v~~g  266 (345)
T cd08286         213 THTVNSAKG---DAIEQVLELTDGRGVDVVIEAVGIPAT---FELCQELVAPGGHIANVG  266 (345)
T ss_pred             Cceeccccc---cHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHhccCCcEEEEec
Confidence            999998764   4555555543  2799999999875 5   788999999999999987

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme

Probab=99.41  E-value=9e-13  Score=112.47  Aligned_cols=75  Identities=23%  Similarity=0.416  Sum_probs=71.3

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---CchHHHHHHHHHccCCcEEEecC
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GGDLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      ++++.+.+++ ++|+|+++++.|++++||+++|+|||.+...|+|.|+||+++   +++++++++.|++.+..+++||+
T Consensus         1 ~~sl~~~~~d-~~G~L~~il~~f~~~~ini~~i~s~p~~~~~~~~~f~vd~~~~~~~~~~~~~l~~l~~~~~~~~~lG~   78 (80)
T cd04905           1 KTSIVFTLPN-KPGALYDVLGVFAERGINLTKIESRPSKGGLWEYVFFIDFEGHIEDPNVAEALEELKRLTEFVKVLGS   78 (80)
T ss_pred             CEEEEEEECC-CCCHHHHHHHHHHHCCcCEEEEEEEEcCCCCceEEEEEEEECCCCCHHHHHHHHHHHHhCCeEEEeee
Confidence            4789999988 899999999999999999999999999999999999999998   67899999999999999999999

The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.41  E-value=8e-12  Score=131.70  Aligned_cols=128  Identities=18%  Similarity=0.108  Sum_probs=112.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++.+++++.|||+++...+.+ ++|++|+|+| +|++|++++++|+++|++|++++.++++++.++++|++
T Consensus       129 lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~-~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~  206 (336)
T cd08276         129 APDHLSFEEAATLPCAGLTAWNALFGLGPL-KPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGAD  206 (336)
T ss_pred             CCCCCCHHHhhhhhHHHHHHHHHHHhhcCC-CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            456778899999999999999998877787 8999999996 59999999999999999999999999999999999999


Q ss_pred             EEEeCCc-cchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTI-RELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~-~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++.. .   ++...+.+.++  ++|+++|++|+..   +..++++++++|+++.+|
T Consensus       207 ~~~~~~~~~---~~~~~~~~~~~~~~~d~~i~~~~~~~---~~~~~~~l~~~G~~v~~g  259 (336)
T cd08276         207 HVINYRTTP---DWGEEVLKLTGGRGVDHVVEVGGPGT---LAQSIKAVAPGGVISLIG  259 (336)
T ss_pred             EEEcCCccc---CHHHHHHHHcCCCCCcEEEECCChHH---HHHHHHhhcCCCEEEEEc
Confidence            9998765 3   45566666543  8999999999777   889999999999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.41  E-value=8e-12  Score=132.36  Aligned_cols=119  Identities=16%  Similarity=-0.008  Sum_probs=104.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|||+++ ..+.+ ++|++|+|+|+ |++|++++|+||++|++|+++++++++++.++++|++
T Consensus       137 lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~-~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~  213 (329)
T cd08298         137 IPEDYDDEEAAPLLCAGIIGYRAL-KLAGL-KPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGAD  213 (329)
T ss_pred             CCCCCCHHHhhHhhhhhHHHHHHH-HhhCC-CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCc
Confidence            456778999999999999999998 77888 89999999985 9999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++...           ...++|+++++.+.. .   ++.++++++++|+++.++
T Consensus       214 ~~~~~~~~-----------~~~~vD~vi~~~~~~~~---~~~~~~~l~~~G~~v~~g  256 (329)
T cd08298         214 WAGDSDDL-----------PPEPLDAAIIFAPVGAL---VPAALRAVKKGGRVVLAG  256 (329)
T ss_pred             EEeccCcc-----------CCCcccEEEEcCCcHHH---HHHHHHHhhcCCEEEEEc
Confidence            98876541           112689999987654 5   899999999999999876

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.40  E-value=3e-12  Score=139.16  Aligned_cols=129  Identities=16%  Similarity=0.015  Sum_probs=106.2

Q ss_pred             CCCCCCHH---hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh
Q psy14589         78 LLSSRDFL---AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG  153 (655)
Q Consensus        78 l~~~~s~~---eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~  153 (655)
                      +++++++.   ++++++++..|||+++ ....+ ++|++|+|.|+ |++|++++|+||++|+ +|++++++++|.+.+++
T Consensus       143 lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~-~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~  219 (375)
T cd08282         143 LPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGV-QPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAES  219 (375)
T ss_pred             CCCCCChhhhhheeeecchHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            45667777   5688899999999998 67777 89999999776 9999999999999998 79999999999999999


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchH---------HHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVY---------RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~---------~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|++ .+++.+.   ++.+.+.+.++ ++|+++||+|+..+         ..++.++++++++|+++.++
T Consensus       220 ~g~~-~v~~~~~---~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g  285 (375)
T cd08282         220 IGAI-PIDFSDG---DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVG  285 (375)
T ss_pred             cCCe-EeccCcc---cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEe
Confidence            9994 5677653   45666666543 79999999997621         12788999999999998887

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.39  E-value=3.7e-12  Score=132.95  Aligned_cols=121  Identities=21%  Similarity=0.150  Sum_probs=105.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|||+++......  +|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus       102 ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~--~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  179 (305)
T cd08270         102 LPDGVSFAQAATLPVAGVTALRALRRGGPL--LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAA  179 (305)
T ss_pred             CCCCCCHHHHHHhHhHHHHHHHHHHHhCCC--CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc
Confidence            456788999999999999999998777655  599999999999999999999999999999999999999999999998


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++...    ++.      .+++|+++|++|+..   +..++++++++|+++.+|
T Consensus       180 ~~~~~~~----~~~------~~~~d~vl~~~g~~~---~~~~~~~l~~~G~~v~~g  222 (305)
T cd08270         180 EVVVGGS----ELS------GAPVDLVVDSVGGPQ---LARALELLAPGGTVVSVG  222 (305)
T ss_pred             EEEeccc----ccc------CCCceEEEECCCcHH---HHHHHHHhcCCCEEEEEe
Confidence            7765332    111      137999999999887   899999999999999998

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.39  E-value=1.4e-11  Score=130.60  Aligned_cols=124  Identities=18%  Similarity=0.089  Sum_probs=105.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|||+++.. ..+ ++|++|+|+|+ |++|++++++|+++|++|+++++++++.+.++++|++
T Consensus       132 ~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~-~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~  208 (330)
T cd08245         132 LPDGLPLAQAAPLLCAGITVYSALRD-AGP-RPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGAD  208 (330)
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHh-hCC-CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCc
Confidence            45677899999999999999999865 667 89999999976 8899999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   +....   ..+++|+++|++|+. .   ...++++++++|+++.++
T Consensus       209 ~~~~~~~~---~~~~~---~~~~~d~vi~~~~~~~~---~~~~~~~l~~~G~~i~~~  256 (330)
T cd08245         209 EVVDSGAE---LDEQA---AAGGADVILVTVVSGAA---AEAALGGLRRGGRIVLVG  256 (330)
T ss_pred             EEeccCCc---chHHh---ccCCCCEEEECCCcHHH---HHHHHHhcccCCEEEEEC
Confidence            99987653   22222   223799999998864 5   789999999999999986

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.39  E-value=6.4e-12  Score=130.79  Aligned_cols=129  Identities=21%  Similarity=0.182  Sum_probs=113.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++.+++..+++++++++.|||+++...+.+ ++|++|+|+|++|++|++++++++++|++|+++++++++.+.++++|++
T Consensus       113 ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~-~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  191 (325)
T cd08253         113 LPDGVSFEQGAALGIPALTAYRALFHRAGA-KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGAD  191 (325)
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            445778899999999999999998877787 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++.+.+.+..  .++|++++++|+..   ....+++++.+|+++.++
T Consensus       192 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~~  243 (325)
T cd08253         192 AVFNYRAE---DLADRILAATAGQGVDVIIEVLANVN---LAKDLDVLAPGGRIVVYG  243 (325)
T ss_pred             EEEeCCCc---CHHHHHHHHcCCCceEEEEECCchHH---HHHHHHhhCCCCEEEEEe
Confidence            99987654   4555665543  37999999999887   788899999999999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.39  E-value=1.1e-11  Score=132.26  Aligned_cols=128  Identities=19%  Similarity=0.135  Sum_probs=102.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++++++ ++++++|||+++ ..+.+ ++|++|+|+|+ |++|.+++|+||++|++ |+++++++++.+.++++|+
T Consensus       132 lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~-~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~  207 (341)
T cd08262         132 VPDGLSMEDAA-LTEPLAVGLHAV-RRARL-TPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGA  207 (341)
T ss_pred             CCCCCCHHHhh-hhhhHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCC
Confidence            45677777665 778999999995 66777 89999999986 99999999999999996 6777778899999999999


Q ss_pred             cEEEeCCccch-hHHHHHHHhc-C-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIREL-DRFANQILSY-G-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~-~d~~~~i~~~-~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++++..... +++. .+.+. . +++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       208 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~g~~v~~g  264 (341)
T cd08262         208 DIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGL---IQQIIEGAPPGGRIVVVG  264 (341)
T ss_pred             cEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEC
Confidence            99999765310 1122 22222 2 3799999999985 6   788999999999999987

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.38  E-value=6.6e-12  Score=133.79  Aligned_cols=126  Identities=20%  Similarity=0.153  Sum_probs=107.5

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++.+ +++.|||+++... .+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++|+
T Consensus       136 lP~~~~~~~aa~~-~~~~~a~~~l~~~-~~-~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~  211 (343)
T cd08235         136 LPDNVSFEEAALV-EPLACCINAQRKA-GI-KPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGA  211 (343)
T ss_pred             CCCCCCHHHHHhh-hHHHHHHHHHHhc-CC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC
Confidence            4567788888765 8899999998654 77 89999999975 99999999999999998 9999999999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+.   ++.+.+.+..+  ++|+++|++|+. .   +..++++++++|+++.++
T Consensus       212 ~~~~~~~~~---~~~~~i~~~~~~~~vd~vld~~~~~~~---~~~~~~~l~~~g~~v~~~  265 (343)
T cd08235         212 DYTIDAAEE---DLVEKVRELTDGRGADVVIVATGSPEA---QAQALELVRKGGRILFFG  265 (343)
T ss_pred             cEEecCCcc---CHHHHHHHHhCCcCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEe
Confidence            999998764   56666665532  699999999976 6   789999999999999887

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.37  E-value=6.5e-12  Score=135.72  Aligned_cols=172  Identities=12%  Similarity=0.052  Sum_probs=120.4

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCC-CCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAE-DNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIR  100 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~-~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~a  100 (655)
                      .+.+....|..|+.|..++|.+..+-. ...++         ....+..++.   ..+++++++.++++ ..+..+++++
T Consensus       104 ~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g---------~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~  173 (364)
T PLN02702        104 EPGISCWRCNLCKEGRYNLCPEMKFFATPPVHG---------SLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHA  173 (364)
T ss_pred             cCCCCCCCCcchhCcCcccCCCccccCCCCCCC---------cccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHH
Confidence            345567789999999877776543210 00010         0011112221   13456677777764 2455568888


Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc--
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY--  177 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~--  177 (655)
                      + ....+ .+|++|+|+|+ |++|++++|+||++|++ |++++++++|.+.++++|++.++++.... .++.+.+.+.  
T Consensus       174 ~-~~~~~-~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~  249 (364)
T PLN02702        174 C-RRANI-GPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNI-EDVESEVEEIQK  249 (364)
T ss_pred             H-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCccc-ccHHHHHHHHhh
Confidence            7 56677 79999999975 99999999999999995 77888888899999999999998754211 1344554432  


Q ss_pred             --CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        178 --GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 --~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        .+++|+|+|++|+. .   +..++++++++|+++.+|
T Consensus       250 ~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g  285 (364)
T PLN02702        250 AMGGGIDVSFDCVGFNKT---MSTALEATRAGGKVCLVG  285 (364)
T ss_pred             hcCCCCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEc
Confidence              23799999999954 6   899999999999999987

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.37  E-value=1.1e-11  Score=131.12  Aligned_cols=127  Identities=19%  Similarity=0.045  Sum_probs=104.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe--cChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV--GCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~--~s~~k~~~a~~LG  155 (655)
                      +++++++.+++ ++.+.+|||+++...+.+ ++|++|+|.| +|++|++++|+||++|++|+++.  .++++.+.++++|
T Consensus       134 lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~-~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g  210 (306)
T cd08258         134 LPENLSLEAAA-LTEPLAVAVHAVAERSGI-RPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELG  210 (306)
T ss_pred             CcCCCCHHHHH-hhchHHHHHHHHHHhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhC
Confidence            45677777665 888999999998888888 8999999976 59999999999999999987763  3455778889999


Q ss_pred             CcEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEee
Q psy14589        156 ADYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFF  214 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~  214 (655)
                      ++++ ++...   ++.+.+.+..  .++|+++|++|+. .   +..++++++++|+++.++.
T Consensus       211 ~~~~-~~~~~---~~~~~l~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~G~~v~~g~  265 (306)
T cd08258         211 ADAV-NGGEE---DLAELVNEITDGDGADVVIECSGAVPA---LEQALELLRKGGRIVQVGI  265 (306)
T ss_pred             Cccc-CCCcC---CHHHHHHHHcCCCCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEcc
Confidence            9988 87654   5666666543  3799999999864 5   7899999999999999983

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.37  E-value=7e-12  Score=133.78  Aligned_cols=127  Identities=17%  Similarity=0.118  Sum_probs=108.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCC----CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE----PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG  153 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~----Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~  153 (655)
                      ++++++..+++++++++.|||+++.+.+.+ .+    |++|+|+|++|++|++++++|+++|++|++++++ ++.+.+++
T Consensus       127 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~  204 (350)
T cd08248         127 KPKNLSHEEAASLPYAGLTAWSALVNVGGL-NPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKS  204 (350)
T ss_pred             CCCCCCHHHHhhchhHHHHHHHHHHHhccC-CCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHH
Confidence            456778889999999999999998777665 44    9999999999999999999999999999888764 67778899


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|++.+++....   ++.+.+... +++|+++|++|+..   ...++++++++|+++.++
T Consensus       205 ~g~~~~~~~~~~---~~~~~l~~~-~~vd~vi~~~g~~~---~~~~~~~l~~~G~~v~~g  257 (350)
T cd08248         205 LGADDVIDYNNE---DFEEELTER-GKFDVILDTVGGDT---EKWALKLLKKGGTYVTLV  257 (350)
T ss_pred             hCCceEEECCCh---hHHHHHHhc-CCCCEEEECCChHH---HHHHHHHhccCCEEEEec
Confidence            999999987653   444555433 47999999999887   899999999999999986

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.37  E-value=1.1e-11  Score=129.22  Aligned_cols=129  Identities=19%  Similarity=0.200  Sum_probs=112.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++.++.+++++++++.|+|+++.+...+ ++|++|+|+|++|++|++++++|+.+|++|+++++++++.+.++++|++
T Consensus       108 ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~-~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  186 (325)
T TIGR02824       108 VPEGLSLVEAAALPETFFTVWSNLFQRGGL-KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGAD  186 (325)
T ss_pred             CCCCCCHHHHHhhhHHHHHHHHHHHHhcCC-CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc
Confidence            445678889999999999999998777888 8999999999999999999999999999999999999998889999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++.+.+.+..  .++|++++++|+..   ...++++++++|+++.++
T Consensus       187 ~~~~~~~~---~~~~~~~~~~~~~~~d~~i~~~~~~~---~~~~~~~l~~~g~~v~~g  238 (325)
T TIGR02824       187 IAINYREE---DFVEVVKAETGGKGVDVILDIVGGSY---LNRNIKALALDGRIVQIG  238 (325)
T ss_pred             EEEecCch---hHHHHHHHHcCCCCeEEEEECCchHH---HHHHHHhhccCcEEEEEe
Confidence            88887653   4556665543  27999999999877   889999999999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.37  E-value=6.9e-12  Score=133.92  Aligned_cols=125  Identities=14%  Similarity=0.066  Sum_probs=102.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++ ..+++.++++++..  .. .+|++|+|.|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus       135 iP~~l~~~~~~-~~~~~~~~~~~~~~--~~-~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~  209 (341)
T PRK05396        135 IPDDIPDDLAA-IFDPFGNAVHTALS--FD-LVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGA  209 (341)
T ss_pred             CcCCCCHHHhH-hhhHHHHHHHHHHc--CC-CCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC
Confidence            45667777766 44677777776543  23 58999999875 9999999999999999 68888888999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++++.   ++.+.+.+.+  .++|+|+||+|+. .   ++.++++++++|+++.++
T Consensus       210 ~~~~~~~~~---~~~~~~~~~~~~~~~d~v~d~~g~~~~---~~~~~~~l~~~G~~v~~g  263 (341)
T PRK05396        210 TRAVNVAKE---DLRDVMAELGMTEGFDVGLEMSGAPSA---FRQMLDNMNHGGRIAMLG  263 (341)
T ss_pred             cEEecCccc---cHHHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEe
Confidence            999998764   5667776654  3899999999875 5   789999999999999997

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.35  E-value=1.3e-11  Score=130.11  Aligned_cols=127  Identities=17%  Similarity=0.099  Sum_probs=105.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhh---cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHP---SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~---~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L  154 (655)
                      ++++++++++++++++++|+++++.   .. ...++|++|+|+|++|++|++++|+|+++|++|++++++++|.+.++++
T Consensus       112 lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~-~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~  190 (324)
T cd08288         112 LPEGLSARQAMAIGTAGFTAMLCVMALEDH-GVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSL  190 (324)
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHHHHHhhc-CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc
Confidence            4567789999999999999987653   33 3314688999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++.++++.+.     ...+.... +++|.++|++|+..   +..++..++.+|+++.+|
T Consensus       191 g~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~g~~~~~G  242 (324)
T cd08288         191 GASEIIDRAEL-----SEPGRPLQKERWAGAVDTVGGHT---LANVLAQTRYGGAVAACG  242 (324)
T ss_pred             CCCEEEEcchh-----hHhhhhhccCcccEEEECCcHHH---HHHHHHHhcCCCEEEEEE
Confidence            99999997642     22344433 26899999999866   778889999999999998

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.35  E-value=1.8e-11  Score=127.17  Aligned_cols=129  Identities=20%  Similarity=0.194  Sum_probs=112.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.+++++++++.|+|+++.+...+ .+|++|+|+|++|++|++++++++++|++|+++++++++.+.++++|++
T Consensus       108 ~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~-~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~  186 (323)
T cd05276         108 VPEGLSLVEAAALPEVFFTAWQNLFQLGGL-KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGAD  186 (323)
T ss_pred             CCCCCCHHHHhhchhHHHHHHHHHHHhcCC-CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence            445678889999999999999998777777 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   +..+.+.+..  +++|+++|++|+..   ...++++++++|+++.++
T Consensus       187 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~---~~~~~~~~~~~g~~i~~~  238 (323)
T cd05276         187 VAINYRTE---DFAEEVKEATGGRGVDVILDMVGGDY---LARNLRALAPDGRLVLIG  238 (323)
T ss_pred             EEEeCCch---hHHHHHHHHhCCCCeEEEEECCchHH---HHHHHHhhccCCEEEEEe
Confidence            99887653   4555555543  37999999999887   788999999999999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.32  E-value=2.9e-11  Score=125.81  Aligned_cols=129  Identities=25%  Similarity=0.272  Sum_probs=112.5

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++.+++..++++++++..||++++.....+ ++|++|+|+|++|++|++++++|+.+|++|+++++++++.+.++++|++
T Consensus       108 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~  186 (323)
T cd08241         108 LPDGLSFEEAAALPVTYGTAYHALVRRARL-QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGAD  186 (323)
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCc
Confidence            345677888888999999999998777777 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++.+.+.+.+  .++|++++++|+..   ...++++++++|+++.++
T Consensus       187 ~~~~~~~~---~~~~~i~~~~~~~~~d~v~~~~g~~~---~~~~~~~~~~~g~~v~~~  238 (323)
T cd08241         187 HVIDYRDP---DLRERVKALTGGRGVDVVYDPVGGDV---FEASLRSLAWGGRLLVIG  238 (323)
T ss_pred             eeeecCCc---cHHHHHHHHcCCCCcEEEEECccHHH---HHHHHHhhccCCEEEEEc
Confidence            99887653   5666666653  27999999999876   888999999999999987

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.31  E-value=3.2e-11  Score=125.91  Aligned_cols=129  Identities=22%  Similarity=0.180  Sum_probs=112.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++.+.+..+++++++++.|+|+++.....+ .+|++|+|+|++|++|++++++++..|++|+++++++++.+.++++|++
T Consensus       113 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~  191 (328)
T cd08268         113 LPDGLSFVEAAALWMQYLTAYGALVELAGL-RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAA  191 (328)
T ss_pred             CCCCCCHHHHHHhhhHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence            445678889999999999999998877787 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   +..+.+.+..  .++|++++++|+..   ...++++++++|+++.++
T Consensus       192 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g  243 (328)
T cd08268         192 HVIVTDEE---DLVAEVLRITGGKGVDVVFDPVGGPQ---FAKLADALAPGGTLVVYG  243 (328)
T ss_pred             EEEecCCc---cHHHHHHHHhCCCCceEEEECCchHh---HHHHHHhhccCCEEEEEE
Confidence            99987653   4555555543  27999999999877   889999999999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.31  E-value=2.1e-11  Score=130.07  Aligned_cols=125  Identities=20%  Similarity=0.065  Sum_probs=105.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.++|++ .+++|||+++. ...+ ++|++|+|+|+ |++|.+++|+||++|++ |+++++++++.+.++++|+
T Consensus       130 lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~-~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~  205 (343)
T cd08236         130 IPDHVDYEEAAMI-EPAAVALHAVR-LAGI-TLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGA  205 (343)
T ss_pred             CcCCCCHHHHHhc-chHHHHHHHHH-hcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence            4567788888777 68899999986 5667 89999999975 99999999999999997 9999988999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+.   . .+.+.+..+  ++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       206 ~~~~~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g  258 (343)
T cd08236         206 DDTINPKEE---D-VEKVRELTEGRGADLVIEAAGSPAT---IEQALALARPGGKVVLVG  258 (343)
T ss_pred             CEEecCccc---c-HHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence            999998764   3 445554432  699999999875 5   789999999999999987

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.31  E-value=2.3e-11  Score=128.43  Aligned_cols=126  Identities=17%  Similarity=0.147  Sum_probs=106.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++.+..++++++++..|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|++++. +++.+.++++|++
T Consensus       108 ~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~  185 (331)
T cd08273         108 VPEGVDAAEAVCLVLNYVTAYQMLHRAAKV-LTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRELGAT  185 (331)
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCe
Confidence            556778889999999999999998877777 89999999999999999999999999999999987 8888889999986


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      . +++...   +.... ....+++|+++|++|+..   ...++++++++|+++.+|
T Consensus       186 ~-~~~~~~---~~~~~-~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g  233 (331)
T cd08273         186 P-IDYRTK---DWLPA-MLTPGGVDVVFDGVGGES---YEESYAALAPGGTLVCYG  233 (331)
T ss_pred             E-EcCCCc---chhhh-hccCCCceEEEECCchHH---HHHHHHHhcCCCEEEEEc
Confidence            5 454432   23322 212247999999999887   889999999999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.31  E-value=3.6e-11  Score=125.63  Aligned_cols=127  Identities=18%  Similarity=0.168  Sum_probs=110.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++.++++++++..|||+++.+.+.+ ++|++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++
T Consensus       113 ~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~  190 (326)
T cd08272         113 KPANLSMREAAALPLVGITAWEGLVDRAAV-QAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGAD  190 (326)
T ss_pred             CCCCCCHHHHHHhHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCC
Confidence            455678889999999999999998777888 899999999999999999999999999999999887 888899999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++...    ++.+.+.+.+.  ++|+++|++|+..   ...++++++++|+++.++
T Consensus       191 ~~~~~~~----~~~~~~~~~~~~~~~d~v~~~~~~~~---~~~~~~~l~~~g~~v~~~  241 (326)
T cd08272         191 PIIYYRE----TVVEYVAEHTGGRGFDVVFDTVGGET---LDASFEAVALYGRVVSIL  241 (326)
T ss_pred             EEEecch----hHHHHHHHhcCCCCCcEEEECCChHH---HHHHHHHhccCCEEEEEe
Confidence            9988654    24555665543  7999999999877   888999999999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.31  E-value=2.4e-11  Score=127.13  Aligned_cols=118  Identities=21%  Similarity=0.097  Sum_probs=100.5

Q ss_pred             Hhhhh-hHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCc
Q psy14589         87 GLAFR-VFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTI  164 (655)
Q Consensus        87 AAal~-~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~  164 (655)
                      +++++ ++++|+++++. ...+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++|++.++++..
T Consensus       107 ~~~~~~~~~~~a~~~~~-~~~~-~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~  183 (312)
T cd08269         107 GQAFPGEPLGCALNVFR-RGWI-RAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS  183 (312)
T ss_pred             hhHHhhhhHHHHHHHHH-hcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC
Confidence            34454 88899999986 6777 89999999975 99999999999999998 999999999999899999999998665


Q ss_pred             cchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        165 RELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       165 ~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .   ++.+.+.+.+  .++|+++|++|+. .   ...++++++++|+++.+|
T Consensus       184 ~---~~~~~l~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~g~~~~~g  229 (312)
T cd08269         184 E---AIVERVRELTGGAGADVVIEAVGHQWP---LDLAGELVAERGRLVIFG  229 (312)
T ss_pred             c---CHHHHHHHHcCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEc
Confidence            3   5666676654  3799999999875 5   789999999999999987

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.31  E-value=7.2e-11  Score=123.35  Aligned_cols=129  Identities=20%  Similarity=0.126  Sum_probs=103.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++++..+++++++++.|||+++.....+ ++|++|+|+|++|++|++++++|+++|++|++++.+ ++.+.++++|++
T Consensus       112 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~~g~~  189 (319)
T cd08267         112 KPEGVSFEEAAALPVAGLTALQALRDAGKV-KPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGAD  189 (319)
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHHcCCC
Confidence            455778889999999999999999877777 899999999999999999999999999999998865 788889999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++. ......+++|++++++|+.. ......+..++++|+++.++
T Consensus       190 ~~~~~~~~---~~~-~~~~~~~~~d~vi~~~~~~~-~~~~~~~~~l~~~g~~i~~g  240 (319)
T cd08267         190 EVIDYTTE---DFV-ALTAGGEKYDVIFDAVGNSP-FSLYRASLALKPGGRYVSVG  240 (319)
T ss_pred             EeecCCCC---Ccc-hhccCCCCCcEEEECCCchH-HHHHHhhhccCCCCEEEEec
Confidence            99987653   232 11111237999999999642 01334444599999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.31  E-value=9e-11  Score=121.47  Aligned_cols=126  Identities=21%  Similarity=0.134  Sum_probs=107.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++.+..+++++++...|+++++.+.+.+ ++|++|+|+|++|++|++++++|+++|++|++++.++ +.+.++++|++
T Consensus       113 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~  190 (309)
T cd05289         113 KPANLSFEEAAALPLAGLTAWQALFELGGL-KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGAD  190 (309)
T ss_pred             CCCCCCHHHHHhhhHHHHHHHHHHHhhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCC
Confidence            445678888999999999999998877767 8999999999999999999999999999999988777 78888999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++.+  .....++|+++|++|+..   ...++++++++|+++.++
T Consensus       191 ~~~~~~~~---~~~~--~~~~~~~d~v~~~~~~~~---~~~~~~~l~~~g~~v~~g  238 (309)
T cd05289         191 EVIDYTKG---DFER--AAAPGGVDAVLDTVGGET---LARSLALVKPGGRLVSIA  238 (309)
T ss_pred             EEEeCCCC---chhh--ccCCCCceEEEECCchHH---HHHHHHHHhcCcEEEEEc
Confidence            99987653   2332  111237999999999887   899999999999999987

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.30  E-value=3e-11  Score=129.60  Aligned_cols=128  Identities=15%  Similarity=0.092  Sum_probs=104.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCC-CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKP-LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GL-TVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~-~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga-~Viat~~s~~k~~~a~~L  154 (655)
                      ++++++..+++.+++++.|||+++.+.+ .+ ++|++|+|+|++|++|++++|+||++ |+ +|+++. ++++.+.++++
T Consensus       119 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~  196 (352)
T cd08247         119 KPENISLEEAAAWPLVLGTAYQILEDLGQKL-GPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL  196 (352)
T ss_pred             CCCCCCHHHHHHhHHHHHHHHHHHHHhhhcc-CCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence            4567889999999999999999987776 67 89999999999999999999999998 45 677765 45666678899


Q ss_pred             CCcEEEeCCccchhH---HHHHH-HhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhc---cccceEEEe
Q psy14589        155 GADYVVDHTIRELDR---FANQI-LSYG--SELDADHPGFTDP-VYRARRKYFADLA---FNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d---~~~~i-~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~---~gGrlv~v~  213 (655)
                      |++.++++.+.   +   +...+ +..+  +++|+++|++|+. .   ...++++++   ++|++|.++
T Consensus       197 g~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~---~~~~~~~l~~~~~~G~~v~~~  259 (352)
T cd08247         197 GADHFIDYDAH---SGVKLLKPVLENVKGQGKFDLILDCVGGYDL---FPHINSILKPKSKNGHYVTIV  259 (352)
T ss_pred             CCCEEEecCCC---cccchHHHHHHhhcCCCCceEEEECCCCHHH---HHHHHHHhCccCCCCEEEEEe
Confidence            99999987653   2   33333 3333  3899999999984 6   788899999   999999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.29  E-value=2.9e-11  Score=129.25  Aligned_cols=125  Identities=17%  Similarity=0.038  Sum_probs=103.5

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      ++++++. +.|+++++..||++++.  ... ++|++|+|.|+ |++|.+++|+|+++|++ |+++++++++.+.++++|+
T Consensus       133 lp~~~~~-~~a~~~~~~~~a~~~~~--~~~-~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~  207 (340)
T TIGR00692       133 NPKSIPP-EYATIQEPLGNAVHTVL--AGP-ISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGA  207 (340)
T ss_pred             CcCCCCh-HhhhhcchHHHHHHHHH--ccC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC
Confidence            3456666 45678899999999873  345 78999999775 99999999999999996 8888888889999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++...   ++.+.+.+..  .++|+++|++|+. .   +..++++++++|+++.+|
T Consensus       208 ~~~v~~~~~---~~~~~l~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~g~~v~~g  261 (340)
T TIGR00692       208 TYVVNPFKE---DVVKEVADLTDGEGVDVFLEMSGAPKA---LEQGLQAVTPGGRVSLLG  261 (340)
T ss_pred             cEEEccccc---CHHHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHhhcCCCEEEEEc
Confidence            999988764   5666666653  3799999999875 5   788999999999999987

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.29  E-value=4.9e-11  Score=124.94  Aligned_cols=128  Identities=24%  Similarity=0.203  Sum_probs=110.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++.+..+++++++++.||++++.+.+.+ ++|++|+|+|++|++|++++++|+++|++|+++. ++++.+.+++.|++
T Consensus       110 ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~-~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~  187 (325)
T cd08271         110 LPDSLSFEEAAALPCAGLTAYQALFKKLRI-EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGAD  187 (325)
T ss_pred             CCCCCCHHHHHhhhhhHHHHHHHHHHhcCC-CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCc
Confidence            446778889999999999999999887887 8999999999999999999999999999998887 67788888999999


Q ss_pred             EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+++....   ++.+.+.+..  .++|++++++|+..   ...++++++++|+++.++
T Consensus       188 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~G~~v~~~  239 (325)
T cd08271         188 HVIDYNDE---DVCERIKEITGGRGVDAVLDTVGGET---AAALAPTLAFNGHLVCIQ  239 (325)
T ss_pred             EEecCCCc---cHHHHHHHHcCCCCCcEEEECCCcHh---HHHHHHhhccCCEEEEEc
Confidence            99987654   4555566553  37999999999886   678999999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.29  E-value=4e-11  Score=127.73  Aligned_cols=125  Identities=11%  Similarity=0.008  Sum_probs=101.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      ++++++..+++. +++++|||+++...+..  +|++|+|.|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus       136 iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~--~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~  211 (339)
T cd08232         136 LPDGLSLRRAAL-AEPLAVALHAVNRAGDL--AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGA  211 (339)
T ss_pred             CcCCCCHHHhhh-cchHHHHHHHHHhcCCC--CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCC
Confidence            456777777754 68889999998665554  8999999875 9999999999999999 89999998988888899999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++++...   ++ .......+++|+++|++|+. .   ++..+++|+++|+++.++
T Consensus       212 ~~vi~~~~~---~~-~~~~~~~~~vd~vld~~g~~~~---~~~~~~~L~~~G~~v~~g  262 (339)
T cd08232         212 DETVNLARD---PL-AAYAADKGDFDVVFEASGAPAA---LASALRVVRPGGTVVQVG  262 (339)
T ss_pred             CEEEcCCch---hh-hhhhccCCCccEEEECCCCHHH---HHHHHHHHhcCCEEEEEe
Confidence            999988653   22 12222223699999999964 6   789999999999999987

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.28  E-value=4.9e-11  Score=126.43  Aligned_cols=125  Identities=17%  Similarity=0.002  Sum_probs=103.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA  156 (655)
                      ++.++++.+++.+ ++..|+++++ ....+ ++|++|+|+|+ |++|.+++|+||++|++ |+++++++++.+.++++|+
T Consensus       130 lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~-~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~  205 (334)
T cd08234         130 IPDNLSFEEAALA-EPLSCAVHGL-DLLGI-KPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGA  205 (334)
T ss_pred             CcCCCCHHHHhhh-hHHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC
Confidence            4566778877665 8888999998 66787 89999999985 99999999999999997 8889899999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSY-GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++++.+.   +.... +.. .+++|+++|++|+. .   +..++++++++|+++.++
T Consensus       206 ~~~~~~~~~---~~~~~-~~~~~~~vd~v~~~~~~~~~---~~~~~~~l~~~G~~v~~g  257 (334)
T cd08234         206 TETVDPSRE---DPEAQ-KEDNPYGFDVVIEATGVPKT---LEQAIEYARRGGTVLVFG  257 (334)
T ss_pred             eEEecCCCC---CHHHH-HHhcCCCCcEEEECCCChHH---HHHHHHHHhcCCEEEEEe
Confidence            999988754   33333 222 24799999999865 5   789999999999999987

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05281 TDH Threonine dehydrogenase

Probab=99.26  E-value=6.5e-11  Score=126.55  Aligned_cols=124  Identities=19%  Similarity=0.063  Sum_probs=102.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA  156 (655)
                      ++++++. +++++++++.++++++.  ... ++|++|+|.|+ |++|++++|+||++|+ +|++++++++|.+.++++|+
T Consensus       135 lP~~~~~-~~a~~~~~~~~a~~~~~--~~~-~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~  209 (341)
T cd05281         135 NDKDIPP-EIASIQEPLGNAVHTVL--AGD-VSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGA  209 (341)
T ss_pred             CcCCCCH-HHhhhhhHHHHHHHHHH--hcC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCc
Confidence            4456666 56678888999998875  344 68999999875 9999999999999999 79889888899999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++++...   ++. .+.+..  +++|+++|++|+. .   ...++++++++|+++.++
T Consensus       210 ~~~~~~~~~---~~~-~~~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~G~~v~~g  262 (341)
T cd05281         210 DVVINPREE---DVV-EVKSVTDGTGVDVVLEMSGNPKA---IEQGLKALTPGGRVSILG  262 (341)
T ss_pred             ceeeCcccc---cHH-HHHHHcCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEc
Confidence            999987653   455 565553  3899999999875 5   789999999999999887

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.24  E-value=7.2e-11  Score=121.99  Aligned_cols=120  Identities=19%  Similarity=0.024  Sum_probs=99.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCC-
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLG-  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LG-  155 (655)
                      +++++++.+++++ ++++|||+++. .+.+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++| 
T Consensus        68 ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~-~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~  143 (277)
T cd08255          68 LPDGLPPERAALT-ALAATALNGVR-DAEP-RLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGP  143 (277)
T ss_pred             CcCCCCHHHhHHH-HHHHHHHHHHH-hcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCC
Confidence            4566788888888 89999999985 5777 89999999985 99999999999999998 999999999999999999 


Q ss_pred             CcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.+++...    ..   .  ...++|+++|++|.. .   ...++++++++|+++.+|
T Consensus       144 ~~~~~~~~~----~~---~--~~~~~d~vl~~~~~~~~---~~~~~~~l~~~g~~~~~g  190 (277)
T cd08255         144 ADPVAADTA----DE---I--GGRGADVVIEASGSPSA---LETALRLLRDRGRVVLVG  190 (277)
T ss_pred             Cccccccch----hh---h--cCCCCCEEEEccCChHH---HHHHHHHhcCCcEEEEEe
Confidence            676665432    11   1  123799999998865 5   789999999999999987

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.24  E-value=7.4e-11  Score=124.56  Aligned_cols=119  Identities=14%  Similarity=-0.025  Sum_probs=97.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      ++++++.++++.+ .+..++|+.+ +...+ ++|++|+|+| +|++|++++|+||.+|++|++++.++++++.++++|++
T Consensus       126 lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~-~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~  201 (319)
T cd08242         126 VPDLVPDEQAVFA-EPLAAALEIL-EQVPI-TPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVE  201 (319)
T ss_pred             CcCCCCHHHhhhh-hHHHHHHHHH-HhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCc
Confidence            4566777776653 4555666655 56677 8999999997 49999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++++..    .      ....++|+++|++|+. .   ++.++++++++|+++.++
T Consensus       202 ~~~~~~~----~------~~~~~~d~vid~~g~~~~---~~~~~~~l~~~g~~v~~~  245 (319)
T cd08242         202 TVLPDEA----E------SEGGGFDVVVEATGSPSG---LELALRLVRPRGTVVLKS  245 (319)
T ss_pred             EEeCccc----c------ccCCCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEc
Confidence            9887643    1      1123799999999885 6   788999999999999865

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.22  E-value=1.8e-10  Score=121.34  Aligned_cols=128  Identities=19%  Similarity=0.140  Sum_probs=106.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++.+++.++++..|||+++.+.+.+ ++|++|+|+|++|++|++++|+|+++ +..++.+ ..+++.+.++++|+
T Consensus       107 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~g~  184 (337)
T cd08275         107 LPDGMSFEEAAAFPVNYLTAYYALFELGNL-RPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEALKENGV  184 (337)
T ss_pred             CCCCCCHHHHhhhhHHHHHHHHHHHHhhCC-CCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHHHHcCC
Confidence            445678889999999999999998877888 89999999999999999999999999 4444433 24567888889999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+++....   ++.+.+.+.+ +++|+++|++|+..   ...++++++++|+++.+|
T Consensus       185 ~~~~~~~~~---~~~~~~~~~~~~~~d~v~~~~g~~~---~~~~~~~l~~~g~~v~~g  236 (337)
T cd08275         185 THVIDYRTQ---DYVEEVKKISPEGVDIVLDALGGED---TRKSYDLLKPMGRLVVYG  236 (337)
T ss_pred             cEEeeCCCC---cHHHHHHHHhCCCceEEEECCcHHH---HHHHHHhhccCcEEEEEe
Confidence            999987754   4555555543 37999999999887   889999999999999987

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG2797|consensus

Probab=99.12  E-value=8.9e-11  Score=120.49  Aligned_cols=95  Identities=20%  Similarity=0.312  Sum_probs=79.9

Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCC---------CCCcceEEEE
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSST---------RIENNYEFMV  309 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~---------~~~~~Y~FfV  309 (655)
                      -|+|++|++.+..  .......|+||+|.... .||.|.++|++|+-++||||+|||||..         .+.|+|.|||
T Consensus       261 vTRFLmLar~p~i--p~t~rl~ktsivf~~~~-gp~vLfkvl~vfa~r~inltkIesRP~h~~p~r~v~~~k~f~ylFyi  337 (377)
T KOG2797|consen  261 VTRFLMLAREPII--PDTDRLFKTSIVFFREK-GPGVLFKVLSVFAFRSINLTKIESRPFHNRPLRVVDDSKNFEYLFYI  337 (377)
T ss_pred             eeEEEEEeccCCC--CCCCccceeeEEEEeec-CCchHHHHHHHHHhhhceeeeeecccccCCCcccccccccccEEEEE
Confidence            3688999886432  12223348999988766 8999999999999999999999999944         4568999999


Q ss_pred             EecC---CchHHHHHHHHHccCCcEEEecC
Q psy14589        310 ECAP---GGDLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       310 d~eg---~~~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      |+|.   +++.++++.++...++.+++||+
T Consensus       338 dfeasmae~~aq~al~~~~e~~sflrvlGs  367 (377)
T KOG2797|consen  338 DFEASMAEPRAQNALGEVQEFTSFLRVLGS  367 (377)
T ss_pred             EEEeccCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            9987   78899999999999999999999

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.90  E-value=7.1e-09  Score=114.16  Aligned_cols=101  Identities=11%  Similarity=-0.068  Sum_probs=80.7

Q ss_pred             HHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589         97 QYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus        97 A~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      ++.++.+..++.-+|++|+|.|+ |+||+.+++.+|.+|++|++++.++.|++.++.+|++.+ +        ..+.+. 
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v~-  256 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T--------MEEAVK-  256 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c--------HHHHHc-
Confidence            45555544333358999999999 999999999999999999999999999999999999543 2        112222 


Q ss_pred             cCCCeeEEEeCCCcchHHHHHHH-HHHhccccceEEEe
Q psy14589        177 YGSELDADHPGFTDPVYRARRKY-FADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~~~~~l~~~-l~~l~~gGrlv~v~  213 (655)
                         ++|+|++|+|...  .++.. ++.+++||+++.+|
T Consensus       257 ---~aDVVI~atG~~~--~i~~~~l~~mk~GgilvnvG  289 (413)
T cd00401         257 ---EGDIFVTTTGNKD--IITGEHFEQMKDGAIVCNIG  289 (413)
T ss_pred             ---CCCEEEECCCCHH--HHHHHHHhcCCCCcEEEEeC
Confidence               5799999999872  26665 99999999999998

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=98.89  E-value=1.1e-08  Score=115.22  Aligned_cols=104  Identities=20%  Similarity=0.197  Sum_probs=81.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc----------hhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE----------LDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~----------~~d~~~~i~~~  177 (655)
                      .+|++|+|.|+ |++|+++++.||.+||+|++++.++++++.++++||+.+ +|..+..          .+++.+...+.
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            58999999999 999999999999999999999999999999999999955 6653310          01222222221


Q ss_pred             ----CCCeeEEEeCCCcch---HHHH-HHHHHHhccccceEEEe
Q psy14589        178 ----GSELDADHPGFTDPV---YRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ----~~gvDvV~D~vG~~~---~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                          .+++|+||+|+|.+.   ...+ +++++.+++||+++.++
T Consensus       242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg  285 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLA  285 (509)
T ss_pred             HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc
Confidence                247999999999631   1123 89999999999999987

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.15  E-value=2.6e-05  Score=88.22  Aligned_cols=100  Identities=20%  Similarity=0.249  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCcc----------chhHHHHH----H
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIR----------ELDRFANQ----I  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~----------~~~d~~~~----i  174 (655)
                      ++++|+|.|+ |.+|++++++|+.+|++|+++++++++++.++.+|++.+ ++..+.          -.++..+.    .
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~  241 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF  241 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence            6899999999 999999999999999999999999999999999999874 332110          00122221    2


Q ss_pred             HhcCCCeeEEEeCC---Ccc----hHHHHHHHHHHhccccceEEEe
Q psy14589        175 LSYGSELDADHPGF---TDP----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~gvDvV~D~v---G~~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+...++|+|++|+   |.+    .   .++.++.+|+|+.+|-+.
T Consensus       242 ~e~~~~~DIVI~TalipG~~aP~Li---t~emv~~MKpGsvIVDlA  284 (511)
T TIGR00561       242 AAQAKEVDIIITTALIPGKPAPKLI---TEEMVDSMKAGSVIVDLA  284 (511)
T ss_pred             HHHhCCCCEEEECcccCCCCCCeee---hHHHHhhCCCCCEEEEee
Confidence            22234799999999   543    4   578899999999988774

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.14  E-value=1.3e-05  Score=88.31  Aligned_cols=102  Identities=12%  Similarity=-0.050  Sum_probs=77.6

Q ss_pred             HHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHH
Q psy14589         96 TQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQIL  175 (655)
Q Consensus        96 TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~  175 (655)
                      +++.++.+..++...|++|+|.|. |.||+.+++.+|.+|++|++++.++.+...++..|+. +.+        ..+.+.
T Consensus       180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal~  249 (406)
T TIGR00936       180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT--------MEEAAK  249 (406)
T ss_pred             hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC--------HHHHHh
Confidence            345555554332258999999999 9999999999999999999999888887777778873 321        112222


Q ss_pred             hcCCCeeEEEeCCCcchHHHHH-HHHHHhccccceEEEe
Q psy14589        176 SYGSELDADHPGFTDPVYRARR-KYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~~~~~l~-~~l~~l~~gGrlv~v~  213 (655)
                          +.|+|++++|...  .++ ..+..+++|+.++.+|
T Consensus       250 ----~aDVVItaTG~~~--vI~~~~~~~mK~GailiN~G  282 (406)
T TIGR00936       250 ----IGDIFITATGNKD--VIRGEHFENMKDGAIVANIG  282 (406)
T ss_pred             ----cCCEEEECCCCHH--HHHHHHHhcCCCCcEEEEEC
Confidence                5799999999873  144 4888999999999887

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.12  E-value=1.4e-05  Score=88.60  Aligned_cols=103  Identities=10%  Similarity=-0.090  Sum_probs=78.9

Q ss_pred             HHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHH
Q psy14589         95 STQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQI  174 (655)
Q Consensus        95 ~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i  174 (655)
                      -.+|.++.+..++.-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|++ +.+        +.+.+
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~--------l~eal  265 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT--------MEEAA  265 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC--------HHHHH
Confidence            4456766655344238999999999 9999999999999999999999988887777777865 322        22222


Q ss_pred             HhcCCCeeEEEeCCCcchHHHHH-HHHHHhccccceEEEe
Q psy14589        175 LSYGSELDADHPGFTDPVYRARR-KYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~~~~~~l~-~~l~~l~~gGrlv~v~  213 (655)
                      .    ++|+|++++|...  .++ ..++.+++|+.++.+|
T Consensus       266 ~----~aDVVI~aTG~~~--vI~~~~~~~mK~GailiNvG  299 (425)
T PRK05476        266 E----LGDIFVTATGNKD--VITAEHMEAMKDGAILANIG  299 (425)
T ss_pred             h----CCCEEEECCCCHH--HHHHHHHhcCCCCCEEEEcC
Confidence            2    5899999999762  154 6888999999998887

>PLN02494 adenosylhomocysteinase

Probab=98.02  E-value=2.8e-05  Score=86.72  Aligned_cols=101  Identities=13%  Similarity=-0.071  Sum_probs=77.8

Q ss_pred             HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589         98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus        98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      +.++.+..++.-.|++|+|.|. |.||+.+++.++.+|++|+++++++.+...+...|+..+ +        +.+.+.  
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-~--------leEal~--  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-T--------LEDVVS--  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-c--------HHHHHh--
Confidence            4454444333358999999999 999999999999999999999998887777888887632 1        222232  


Q ss_pred             CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        178 GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        ..|+|++++|... -.....++.+++||.++.+|
T Consensus       309 --~ADVVI~tTGt~~-vI~~e~L~~MK~GAiLiNvG  341 (477)
T PLN02494        309 --EADIFVTTTGNKD-IIMVDHMRKMKNNAIVCNIG  341 (477)
T ss_pred             --hCCEEEECCCCcc-chHHHHHhcCCCCCEEEEcC
Confidence              4699999999872 00378999999999999987

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.79  E-value=0.00024  Score=75.51  Aligned_cols=91  Identities=12%  Similarity=0.149  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|+|.|+ |++|..+++.++.+|++|++.++++++.+.++.+|+..+ ...     ++.+.+.    ++|+||+|++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~~-----~l~~~l~----~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HLS-----ELAEEVG----KIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cHH-----HHHHHhC----CCCEEEECCC
Confidence            7999999999 999999999999999999999999988888899997643 221     2333332    6899999997


Q ss_pred             cchHHHHHHHHHHhccccceEEEe
Q psy14589        190 DPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ...  ..+..++.+++++.+|-+.
T Consensus       220 ~~~--i~~~~l~~~~~g~vIIDla  241 (296)
T PRK08306        220 ALV--LTKEVLSKMPPEALIIDLA  241 (296)
T ss_pred             hhh--hhHHHHHcCCCCcEEEEEc
Confidence            663  1366778899988777664

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.77  E-value=0.00025  Score=71.44  Aligned_cols=102  Identities=16%  Similarity=0.044  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-H---hCCCcEEE--eCCccchhHHHH---HHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-Y---GLGADYVV--DHTIRELDRFAN---QILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~---~LGAd~vI--d~~~~~~~d~~~---~i~~~~~g  180 (655)
                      .|++|+|+|++|+||..+++.+...|++|+++++++++.+.+ .   ..|..+.+  |..+.  +++.+   .+.+..++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST--ESARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCH--HHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999998877655 2   22332333  33332  12322   22222346


Q ss_pred             eeEEEeCCCcch---------------------HHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDPV---------------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~~---------------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|.++.++|...                     ...++..++.++++|++|.++
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s  135 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVS  135 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEe
Confidence            899999887421                     112344555667778888776

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.00037  Score=72.25  Aligned_cols=79  Identities=24%  Similarity=0.199  Sum_probs=58.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      ++++|+||+|++|..+++.+...|++|+++++++++.+.+.+.|...+ .|..+.. ..++.+.+.+..+++|+++.+.|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            479999999999999999888889999999999888777776676544 4665531 11222333333347999999998


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        82 ~   82 (274)
T PRK05693         82 Y   82 (274)
T ss_pred             C
Confidence            4

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.68  E-value=0.00032  Score=78.56  Aligned_cols=99  Identities=12%  Similarity=-0.054  Sum_probs=75.1

Q ss_pred             HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589         99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus        99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      .++.+..+..-.|++|+|.|. |.||..+++.++.+|++|+++++++.+...+...|+..+         ++.+.++   
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~---------~leell~---  308 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV---------TLEDVVE---  308 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec---------cHHHHHh---
Confidence            555554443248999999999 999999999999999999999888777655666676432         1222232   


Q ss_pred             CCeeEEEeCCCcchHHHH-HHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDPVYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                       ..|+|+.++|...  .+ ...++.|++|+.++-+|
T Consensus       309 -~ADIVI~atGt~~--iI~~e~~~~MKpGAiLINvG  341 (476)
T PTZ00075        309 -TADIFVTATGNKD--IITLEHMRRMKNNAIVGNIG  341 (476)
T ss_pred             -cCCEEEECCCccc--ccCHHHHhccCCCcEEEEcC
Confidence             5799999998762  14 48999999999999987

>PRK08818 prephenate dehydrogenase; Provisional

Probab=97.63  E-value=9.5e-05  Score=80.84  Aligned_cols=52  Identities=27%  Similarity=0.319  Sum_probs=47.8

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP  313 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg  313 (655)
                      .-+++.|++++|+||+|+++|..|+.++|||++|||  ++.+.|+|.||||+++
T Consensus       294 ~~~~l~~~v~~d~pG~L~~vl~~la~~~INit~Ies--~~~r~~~y~f~i~~~~  345 (370)
T PRK08818        294 EPLTLSVYLPEDRPGSLRTLLHVFEQHGVNLSSIHS--SRTPAGELHFRIGFEP  345 (370)
T ss_pred             cceEEEEECCCCCCChHHHHHHHHHHcCcccceEEE--ecccCceEEEEEEEec
Confidence            367899999734999999999999999999999999  8889999999999998

>PRK12742 oxidoreductase; Provisional

Probab=97.61  E-value=0.00057  Score=68.80  Aligned_cols=78  Identities=19%  Similarity=0.175  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH-HhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA-YGLGADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a-~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|++|+|+||+|+||..+++.....|++|+.+.+ ++++.+.+ .++++..+ .|..+.  +.+.+.+.+ .+++|+++.
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~--~~~~~~~~~-~~~id~li~   81 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADR--DAVIDVVRK-SGALDILVV   81 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCH--HHHHHHHHH-hCCCcEEEE
Confidence            5889999999999999999988889999987754 44444443 45666543 344332  234444433 246899999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        82 ~ag~   85 (237)
T PRK12742         82 NAGI   85 (237)
T ss_pred             CCCC
Confidence            9875

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.60  E-value=0.0003  Score=73.40  Aligned_cols=101  Identities=16%  Similarity=0.113  Sum_probs=68.6

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      +.+ ++|++||..|+ |+ |..++++++..|.  +|++++.+++.++.+++    .|.+.+-.. ..   ++. .+.-..
T Consensus        73 ~~~-~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~-~~---d~~-~l~~~~  144 (272)
T PRK11873         73 AEL-KPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR-LG---EIE-ALPVAD  144 (272)
T ss_pred             ccC-CCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE-Ec---chh-hCCCCC
Confidence            456 79999999998 55 8888888888775  69999999998888875    454433111 11   221 111112


Q ss_pred             CCeeEEEeCCC-c---chHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFT-D---PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG-~---~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+|+|+.... .   +..+.++.+.++|++||++++..
T Consensus       145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~  183 (272)
T PRK11873        145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISD  183 (272)
T ss_pred             CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            37999885431 1   11234899999999999999876

>PRK06182 short chain dehydrogenase; Validated

Probab=97.59  E-value=0.00094  Score=69.15  Aligned_cols=79  Identities=19%  Similarity=0.184  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHH---HHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFAN---QILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~---~i~~~~~gvDvV~  185 (655)
                      ++.+++|+|++|++|..+++.....|++|+++++++++++.+.+.++..+ .|..+.  +++.+   .+.+..+++|+++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDE--ASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEE
Confidence            46789999999999999999888889999999999888776665565443 455443  23333   3333344799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .+.|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            99984

>PRK08324 short chain dehydrogenase; Validated

Probab=97.52  E-value=0.00068  Score=80.07  Aligned_cols=102  Identities=16%  Similarity=0.019  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCC-----cEEEeCCccchhHHHH---HHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGA-----DYVVDHTIRELDRFAN---QILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGA-----d~vId~~~~~~~d~~~---~i~~~~~g  180 (655)
                      +|++|+|+||+|+||..+++.....|++|+++++++++.+.+. .++.     ....|.++.  +++.+   .+.+..++
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~--~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDE--AAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCH--HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999899999999999988766553 3443     112354442  22322   23333457


Q ss_pred             eeEEEeCCCcc-----------------------hHHHHHHHHHHhcc---ccceEEEe
Q psy14589        181 LDADHPGFTDP-----------------------VYRARRKYFADLAF---NYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~-----------------------~~~~l~~~l~~l~~---gGrlv~v~  213 (655)
                      +|++++++|..                       .+..++.+++.+++   +|++|.++
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vs  557 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIA  557 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            99999999831                       11224455666665   67888776

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.52  E-value=0.00047  Score=70.66  Aligned_cols=80  Identities=19%  Similarity=0.098  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC----cEEEeCCccchhHHHHHHH---hcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA----DYVVDHTIRELDRFANQIL---SYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA----d~vId~~~~~~~d~~~~i~---~~~~gv  181 (655)
                      .++.++|+|||+|+|.+.++.....|++|+.++|+.++++.+ .++|.    -.++|.++.  ++..+.+.   +.-+.+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~--~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDR--AAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCH--HHHHHHHHHHHHhhCcc
Confidence            568899999999999999999999999999999999999876 46883    223565553  13333333   333479


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+.++..|-.
T Consensus        83 DiLvNNAGl~   92 (246)
T COG4221          83 DILVNNAGLA   92 (246)
T ss_pred             cEEEecCCCC
Confidence            9999988754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.52  E-value=0.001  Score=72.97  Aligned_cols=97  Identities=13%  Similarity=0.023  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      ++.+|+|.|+ |.+|+.+++.++.+|++|+++++++++++.+. .+|+....++.+.  +++.+.+.    .+|+|++|+
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~--~~l~~~l~----~aDvVI~a~  238 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNA--YEIEDAVK----RADLLIGAV  238 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCH--HHHHHHHc----cCCEEEEcc
Confidence            4556999999 99999999999999999999999988877765 4565433333321  23444333    589999998


Q ss_pred             ---CcchHH-HHHHHHHHhccccceEEEe
Q psy14589        189 ---TDPVYR-ARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 ---G~~~~~-~l~~~l~~l~~gGrlv~v~  213 (655)
                         |..... .....++.+++++.++-++
T Consensus       239 ~~~g~~~p~lit~~~l~~mk~g~vIvDva  267 (370)
T TIGR00518       239 LIPGAKAPKLVSNSLVAQMKPGAVIVDVA  267 (370)
T ss_pred             ccCCCCCCcCcCHHHHhcCCCCCEEEEEe
Confidence               432100 0367788899998888775

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.50  E-value=0.00077  Score=67.20  Aligned_cols=100  Identities=11%  Similarity=0.049  Sum_probs=69.9

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCC-CcEEEeCCccchhHHHHHHHhcC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLG-ADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LG-Ad~vId~~~~~~~d~~~~i~~~~  178 (655)
                      .+ ++|++|+-.|+ |. |.+++++|+..+  .+|++++.+++..+.++    .+| .+.+.....    +..+.+....
T Consensus        37 ~~-~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~----d~~~~l~~~~  109 (198)
T PRK00377         37 RL-RKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG----EAPEILFTIN  109 (198)
T ss_pred             CC-CCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe----chhhhHhhcC
Confidence            55 78999999998 55 999999998864  58999999998877653    466 444322221    2333333333


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+|.|+...+.. ..+.++.+.+.|++||++++.
T Consensus       110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence            4799999865543 224478888999999999863

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.49  E-value=0.00044  Score=74.04  Aligned_cols=88  Identities=17%  Similarity=0.053  Sum_probs=63.2

Q ss_pred             hHHHHHHHHhhcC----CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHH-HHHHhCCCcEEEeCCcc
Q psy14589         92 VFHSTQYIRHPSK----PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGV-AKAYGLGADYVVDHTIR  165 (655)
Q Consensus        92 ~a~~TA~~aL~~~----~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~-~~a~~LGAd~vId~~~~  165 (655)
                      .+.+++++++...    +.+  +|++|+|.|+ |.+|..+++.++..|+ +|+++++++++. +.++++|++ +++..  
T Consensus       157 ~~~sv~~~Av~~a~~~~~~l--~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-~~~~~--  230 (311)
T cd05213         157 GAVSISSAAVELAEKIFGNL--KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-AVPLD--  230 (311)
T ss_pred             CCcCHHHHHHHHHHHHhCCc--cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-EEeHH--
Confidence            3455555554322    223  7999999999 9999999999988886 788899988765 566788984 44321  


Q ss_pred             chhHHHHHHHhcCCCeeEEEeCCCcch
Q psy14589        166 ELDRFANQILSYGSELDADHPGFTDPV  192 (655)
Q Consensus       166 ~~~d~~~~i~~~~~gvDvV~D~vG~~~  192 (655)
                         ++.+.+.    ..|+|+.++|++.
T Consensus       231 ---~~~~~l~----~aDvVi~at~~~~  250 (311)
T cd05213         231 ---ELLELLN----EADVVISATGAPH  250 (311)
T ss_pred             ---HHHHHHh----cCCEEEECCCCCc
Confidence               3334343    4799999999886

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0011  Score=69.18  Aligned_cols=81  Identities=23%  Similarity=0.259  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhc-CCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSY-GSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~-~~gvDvV~D  186 (655)
                      .+++|+|+||+|++|..+++.....|++|+++++++++.+.+.+.|.+.+ .|.++.. .+++.+.+.+. .+.+|+++.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            46789999999999999998888889999999999988887777676544 3555431 11223333222 347999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      +.|.
T Consensus        83 ~Ag~   86 (277)
T PRK05993         83 NGAY   86 (277)
T ss_pred             CCCc
Confidence            8764

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0025  Score=68.65  Aligned_cols=81  Identities=17%  Similarity=0.105  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .+.+|+|+||+||||..+++.....|++|+++++++++.+.+    ++.|+...   .|..+.. .....+.+.+..+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            578999999999999999988888899999999988776543    34565432   3554431 112223333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999885

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.32  E-value=0.00084  Score=70.11  Aligned_cols=83  Identities=19%  Similarity=0.176  Sum_probs=59.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC----CCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL----GAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L----GAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      ..+.+++|+|||+|||...+......|.+|+.++|+++|++.+. ++    |.. .+  +|.++.+ ...+.+++.+...
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            46889999999999999988888888999999999999988763 22    221 23  4555431 1122233333334


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      .+|+.++++|-.
T Consensus        84 ~IdvLVNNAG~g   95 (265)
T COG0300          84 PIDVLVNNAGFG   95 (265)
T ss_pred             cccEEEECCCcC
Confidence            799999999865

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.31  E-value=0.0059  Score=60.39  Aligned_cols=99  Identities=17%  Similarity=0.008  Sum_probs=70.3

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .+ ++|++++=.||  |.|..++++|+.. ..+|++++++++..+..    +++|.+.+.-...    +..+.+.+.. .
T Consensus        31 ~~-~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~-~  102 (187)
T COG2242          31 RP-RPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP-S  102 (187)
T ss_pred             CC-CCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-C
Confidence            45 79998887787  6677888999554 45999999998877665    5689885533222    2233343333 5


Q ss_pred             eeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|.+|-.-|+...+.++.++..|++|||+|.-
T Consensus       103 ~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n  134 (187)
T COG2242         103 PDAIFIGGGGNIEEILEAAWERLKPGGRLVAN  134 (187)
T ss_pred             CCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence            89998665555445689999999999999973

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.004  Score=63.15  Aligned_cols=102  Identities=17%  Similarity=0.095  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHHH----HHhCCCcE-E--EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVAK----AYGLGADY-V--VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~~----a~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~  178 (655)
                      .|.+++|+||+|+||..+++.....|++|++++++.+ +.+.    ++..|... .  .|..+.  ++..+   .+.+..
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE--ESVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH--HHHHHHHHHHHHhC
Confidence            5789999999999999999888888999998887643 2222    23334321 1  354443  23332   333323


Q ss_pred             CCeeEEEeCCCcc-----------------hHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDP-----------------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~-----------------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|+++.+.|..                 ....++.+.+.++.+|++|.+.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is  134 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT  134 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence            4789988887642                 1122344555555567777764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.27  E-value=0.002  Score=62.41  Aligned_cols=93  Identities=16%  Similarity=0.124  Sum_probs=63.6

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc--
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP--  191 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~--  191 (655)
                      |+|.||+|.+|..+++.+...|.+|++++|++++.+.  ..+++.+. ..-.+.+++.+.+    .++|+|+.++|..  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~-~d~~d~~~~~~al----~~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQ-GDLFDPDSVKAAL----KGADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEE-SCTTCHHHHHHHH----TTSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccce-eeehhhhhhhhhh----hhcchhhhhhhhhcc
Confidence            7899999999999999999999999999999998776  55555442 2221112233333    2799999999843  


Q ss_pred             hHHHHHHHHHHhcccc--ceEEEe
Q psy14589        192 VYRARRKYFADLAFNY--KHFFFF  213 (655)
Q Consensus       192 ~~~~l~~~l~~l~~gG--rlv~v~  213 (655)
                      ........++.++..|  ++|.++
T Consensus        74 ~~~~~~~~~~a~~~~~~~~~v~~s   97 (183)
T PF13460_consen   74 DVDAAKNIIEAAKKAGVKRVVYLS   97 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred             cccccccccccccccccccceeee
Confidence            1122455566665555  556554

...

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.25  E-value=0.0011  Score=73.13  Aligned_cols=117  Identities=12%  Similarity=-0.021  Sum_probs=81.0

Q ss_pred             HhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc
Q psy14589         87 GLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE  166 (655)
Q Consensus        87 AAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~  166 (655)
                      ..++..+..+.+..+.+...+ ++|++||-.|+  |.|.++..+++..|++|++++.+++.++.+++.....-++.... 
T Consensus       145 ~~~L~~Aq~~k~~~l~~~l~l-~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~-  220 (383)
T PRK11705        145 ADTLEEAQEAKLDLICRKLQL-KPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQ-  220 (383)
T ss_pred             CCCHHHHHHHHHHHHHHHhCC-CCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEEC-
Confidence            345666666677766666777 89999999998  68889999999999999999999999988876433211221111 


Q ss_pred             hhHHHHHHHhcCCCeeEEEe-----CCCcch-HHHHHHHHHHhccccceEEEe
Q psy14589        167 LDRFANQILSYGSELDADHP-----GFTDPV-YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       167 ~~d~~~~i~~~~~gvDvV~D-----~vG~~~-~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        ++.    +..+.+|.|+.     .+|... ...++.+.+.|++||++++..
T Consensus       221 --D~~----~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        221 --DYR----DLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             --chh----hcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence              221    11236888763     345431 133788888999999998864

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.25  E-value=0.0026  Score=73.07  Aligned_cols=85  Identities=16%  Similarity=0.083  Sum_probs=58.4

Q ss_pred             HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh---------CCCc-----EE--EeCC
Q psy14589        100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG---------LGAD-----YV--VDHT  163 (655)
Q Consensus       100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~---------LGAd-----~v--Id~~  163 (655)
                      +.-...+. +.|++|+|+||+|+||..+++.+...|++|++++++.++.+.+.+         .|+.     .+  .|..
T Consensus        70 ~~~~~~~~-~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt  148 (576)
T PLN03209         70 AIPKELDT-KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE  148 (576)
T ss_pred             cccccccc-CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence            33344555 789999999999999999998888889999999999887654422         1321     11  2333


Q ss_pred             ccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        164 IRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       164 ~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +.  ++    +.+.-+++|+||.++|..
T Consensus       149 D~--es----I~~aLggiDiVVn~AG~~  170 (576)
T PLN03209        149 KP--DQ----IGPALGNASVVICCIGAS  170 (576)
T ss_pred             CH--HH----HHHHhcCCCEEEEccccc
Confidence            31  12    223334789999998853

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.25  E-value=0.0013  Score=65.84  Aligned_cols=82  Identities=20%  Similarity=0.090  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC---CcEEEeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG---ADYVVDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG---Ad~vId~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|.+|||+||++|||+..++--..+|=+||.+.|++++++.+++.-   .+.|.|..+.. ..++.+++++....+++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            6889999999999999888777778999999999999999987632   24455544431 1246677766655788888


Q ss_pred             eCCCcc
Q psy14589        186 PGFTDP  191 (655)
Q Consensus       186 D~vG~~  191 (655)
                      ++.|-.
T Consensus        84 NNAGIq   89 (245)
T COG3967          84 NNAGIQ   89 (245)
T ss_pred             eccccc
Confidence            887743

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.22  E-value=0.00018  Score=82.94  Aligned_cols=77  Identities=18%  Similarity=0.200  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC---------------------hHHHHHHHhCCCcEEEeCCccch
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC---------------------PVGVAKAYGLGADYVVDHTIREL  167 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s---------------------~~k~~~a~~LGAd~vId~~~~~~  167 (655)
                      +.|++|+|.|+ |++|+++++.++.+|++|++++..                     +.+++.++++|++..++..... 
T Consensus       135 ~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~-  212 (564)
T PRK12771        135 DTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGE-  212 (564)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECC-
Confidence            68999999999 999999999999999999888742                     3566778899998887754311 


Q ss_pred             hHH-HHHHHhcCCCeeEEEeCCCcc
Q psy14589        168 DRF-ANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       168 ~d~-~~~i~~~~~gvDvV~D~vG~~  191 (655)
                       +. .+.+.   .++|+|++++|..
T Consensus       213 -~~~~~~~~---~~~D~Vi~AtG~~  233 (564)
T PRK12771        213 -DITLEQLE---GEFDAVFVAIGAQ  233 (564)
T ss_pred             -cCCHHHHH---hhCCEEEEeeCCC
Confidence             11 11121   2689999999987

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0017  Score=69.97  Aligned_cols=81  Identities=21%  Similarity=0.237  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .+++|+|+||+||||..+++.....|++|+.+++++++++.+    ++.|++..   .|.++.. .+.+.+.+.+..+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            678999999999999999998888999999999998877543    44565432   3544431 112333344434579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0044  Score=62.68  Aligned_cols=81  Identities=22%  Similarity=0.148  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|.+|+|+||+|++|..+++.....|++|+++++++++.+.+ +++|....   .|..+.. ..++.+.+.+..+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999998888999999999887766544 45665422   2333321 112333344434579999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999875

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0024  Score=65.63  Aligned_cols=82  Identities=18%  Similarity=0.105  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCC-chHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCcEE----EeCCccc-hhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANR-GNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGADYV----VDHTIRE-LDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasG-gVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd~v----Id~~~~~-~~d~~~~i~~~  177 (655)
                      .+|++++|+|++| |||..+++.....|++|+++++++++.+.+.    + +|...+    .|..+.. .+.+.+.+.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999986 8999999999899999999988877665442    2 454433    2444421 11223333333


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus        95 ~g~id~li~~ag~  107 (262)
T PRK07831         95 LGRLDVLVNNAGL  107 (262)
T ss_pred             cCCCCEEEECCCC
Confidence            3579999999984

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0021  Score=67.75  Aligned_cols=81  Identities=17%  Similarity=0.075  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC--cEE---EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA--DYV---VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA--d~v---Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      +|++|+|+||+||||..+++.....|++|+++++++++++.+ ++++.  ...   .|.++.. .+++.+.+.+..+++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            688999999999999999998888999999999988876654 44542  211   3544431 1123333433345799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999985

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0046  Score=63.74  Aligned_cols=81  Identities=16%  Similarity=0.004  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|.+++|+||+|+||..+++.....|++|+++++++++.+.+ +++|... +  .|..+.. ..++.+.+.+..+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999988888899999999988765554 4455321 1  3444421 012223333333478999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.+.|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            998874

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0026  Score=64.24  Aligned_cols=78  Identities=14%  Similarity=0.127  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV-VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|.+++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+...+ .|..+.  +++.+.+.+ .+++|+++.+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~-~~~~d~vi~~   84 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD--AAIRAALAA-AGAFDGLVNC   84 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH--HHHHHHHHH-hCCCCEEEEC
Confidence            6789999999999999999999889999999999887776554 3454433 344432  223333332 3478999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        85 ag~   87 (245)
T PRK07060         85 AGI   87 (245)
T ss_pred             CCC
Confidence            985

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0049  Score=63.84  Aligned_cols=78  Identities=23%  Similarity=0.216  Sum_probs=53.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE----EEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY----VVDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~----vId~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      +++|+||+|++|..+++.+...|++|+++++++++.+.+    +..|+..    ..|.++.. .+.+.+.+.+..+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999998888899999998887665443    3345432    24555431 11223334333457999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.+.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999985

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.12  E-value=0.0052  Score=63.12  Aligned_cols=81  Identities=16%  Similarity=0.076  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE----EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV----VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v----Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|++++|+||+  +|||..+++.....|++|+.++++++..+.++++....+    .|..+.. .+++.+.+.+..+.+|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            68899999998  799999888777789999999887443333444422111    3444321 1223344444335799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        86 ~lv~nAg~   93 (252)
T PRK06079         86 GIVHAIAY   93 (252)
T ss_pred             EEEEcccc
Confidence            99998873

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0058  Score=63.14  Aligned_cols=79  Identities=15%  Similarity=0.087  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccchhHHHHHHHh---cCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRELDRFANQILS---YGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~~~d~~~~i~~---~~~  179 (655)
                      ++.+++|+||+|+||..+++.....|++|+++++++++.+..    .+.+...   .+|.++.  +++.+.+.+   ..+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~i~~~~~~~~~~~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY--AAVEAAFAQIADEFG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH--HHHHHHHHHHHHHcC
Confidence            688999999999999999998888999999999887765433    2233322   1354432  233333332   234


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus        86 ~iD~vi~~ag~   96 (264)
T PRK07576         86 PIDVLVSGAAG   96 (264)
T ss_pred             CCCEEEECCCC
Confidence            78999988763

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.10  E-value=0.0075  Score=61.69  Aligned_cols=81  Identities=14%  Similarity=0.055  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH---HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA---YGLGADY---VVDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a---~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|.+++|+||+|+||..+++.....|++|+++++++...+..   ...|.+.   ..|..+.. ..++.+.+.+..+++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            578999999999999999988888899999998875433222   2335432   23554421 1123333333345799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        87 ~lv~nAg~   94 (260)
T PRK12823         87 VLINNVGG   94 (260)
T ss_pred             EEEECCcc
Confidence            99999873

>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains

Probab=97.09  E-value=0.0018  Score=52.48  Aligned_cols=65  Identities=15%  Similarity=0.210  Sum_probs=53.0

Q ss_pred             EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCC--CCcceEEEEEecC--CchHHHHHHHHHccCCc
Q psy14589        265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTR--IENNYEFMVECAP--GGDLSSVIESLRSSCSY  330 (655)
Q Consensus       265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~--~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~~  330 (655)
                      .+.+++ +||.|+++++.+++.++|+..+.+++.+.  ..+.+.+.+.++.  .+.++++++.|++.+-.
T Consensus         2 ~v~~~d-~~G~L~~i~~~i~~~~~nI~~i~~~~~~~~~~~~~~~~~i~v~~~~~~~l~~l~~~l~~~g~~   70 (73)
T cd04886           2 RVELPD-RPGQLAKLLAVIAEAGANIIEVSHDRAFKTLPLGEVEVELTLETRGAEHIEEIIAALREAGYD   70 (73)
T ss_pred             EEEeCC-CCChHHHHHHHHHHcCCCEEEEEEEeccCCCCCceEEEEEEEEeCCHHHHHHHHHHHHHcCCE
Confidence            345676 89999999999999999999999888653  3567788888877  47788999999887543

This CD includes the C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. The Escherichia coli tdcB gene product, ThrD-II, anaerobically catalyzes the pyridoxal phosphate-dependent dehydration of L-threonine and L-serine to ammonia and to alpha-ketobutyrate and pyruvate, respectively. Tetrameric ThrD-II is subject to allosteric activation by AMP, inhibition by alpha-keto acids, and catabolite inactivation by several metabolites of glycolysis and the citric acid cycle. Also included in this CD are N-terminal ACT domains present in smaller (~170 a.a.) archaeal proteins of unknown function. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.08  E-value=0.0054  Score=68.59  Aligned_cols=81  Identities=22%  Similarity=0.167  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--HHHHH-HHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP--VGVAK-AYGLGADYV-VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~-a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+|++|+||..+++.....|++|+++++++  ++.+. ..++++..+ +|..+.. ...+.+.+.+..+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999998888999999987743  23322 345665433 4655431 112233333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus       289 i~~AG~  294 (450)
T PRK08261        289 VHNAGI  294 (450)
T ss_pred             EECCCc
Confidence            999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0044  Score=63.26  Aligned_cols=82  Identities=16%  Similarity=0.081  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc----EEEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD----YVVDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd----~vId~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      ++.+++|+||+|++|..+++.....|++|+++++++++.+.+.+ .+-.    ...|..+.. ..++.+.+.+..+++|+
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDV   89 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            77899999999999999998888899999999998776655433 2211    123444321 01122333333347999


Q ss_pred             EEeCCCcc
Q psy14589        184 DHPGFTDP  191 (655)
Q Consensus       184 V~D~vG~~  191 (655)
                      |+.++|..
T Consensus        90 vi~~ag~~   97 (264)
T PRK12829         90 LVNNAGIA   97 (264)
T ss_pred             EEECCCCC
Confidence            99988754

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0085  Score=62.03  Aligned_cols=80  Identities=23%  Similarity=0.196  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C----CCc-E--EEeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L----GAD-Y--VVDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L----GAd-~--vId~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+|++||||..+++.....|++|+++++++++.+.+.+ +    |.. .  ..|..+.. .+.+.+.+.+ .++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~g~   85 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN-IGE   85 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh-hCC
Confidence            68899999999999999998888899999999998877655432 1    322 1  13444421 1123333332 247


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        86 iD~lv~nag~   95 (263)
T PRK08339         86 PDIFFFSTGG   95 (263)
T ss_pred             CcEEEECCCC
Confidence            9999998875

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0041  Score=63.65  Aligned_cols=81  Identities=21%  Similarity=0.144  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|++|+|+||+|+||..+++.....|++|+++++++.+.+.+ .+++...+ .|..+.. .+...+.+.+..+++|+++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            688999999999999999998888899999999988766554 44554322 3554431 11222333333347899999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8874

>PRK08017 oxidoreductase; Provisional

Probab=97.03  E-value=0.004  Score=63.37  Aligned_cols=79  Identities=25%  Similarity=0.300  Sum_probs=57.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhc-CCCeeEEEeCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSY-GSELDADHPGF  188 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~-~~gvDvV~D~v  188 (655)
                      ++|+|+||+|+||..+++.....|++|+++++++++.+.+++.|++.+ .|..+.. ..+..+.+.+. .+++|.++.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            579999999999999999888889999999999988888887887554 3444321 01223333332 24688888887


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus        83 g~   84 (256)
T PRK08017         83 GF   84 (256)
T ss_pred             CC
Confidence            64

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0082  Score=60.69  Aligned_cols=81  Identities=20%  Similarity=0.122  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      ++.+++|+|++|+||..++......|++|+++++++++.+.+    ++.|... +  .|..+.. ...+.+.+.+..+++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999988888899999998887765543    2334322 1  2444321 011223333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.01  E-value=0.0043  Score=62.77  Aligned_cols=81  Identities=17%  Similarity=0.073  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+|++|++|..+++.+...|++|+.+++++++.+.+    ++.|+..   .+|..+.. .+++.+.+.+..+++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999998888999999999987765443    3345432   23433321 112222333223478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999874

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.99  E-value=0.0018  Score=57.61  Aligned_cols=96  Identities=15%  Similarity=0.024  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHHHHHHHh----CCC-cEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYG----LGA-DYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k~~~a~~----LGA-d~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      +|.+||-.|+  |.|.+++.+++. .|++|++++.+++-.+.+++    .+. +.+ .....   ++ ........++|+
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~---d~-~~~~~~~~~~D~   73 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRI-TFVQG---DA-EFDPDFLEPFDL   73 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTE-EEEES---CC-HGGTTTSSCEEE
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCe-EEEEC---cc-ccCcccCCCCCE
Confidence            5889999997  668899999994 68899999999988777753    222 222 11111   23 222222347999


Q ss_pred             EEeCC-Ccc-hH------HHHHHHHHHhccccceEEE
Q psy14589        184 DHPGF-TDP-VY------RARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       184 V~D~v-G~~-~~------~~l~~~l~~l~~gGrlv~v  212 (655)
                      |+... ... ..      +.++.+.+.|++||++++-
T Consensus        74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   74 VICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             EEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            99766 222 11      2367888899999999863

...

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.99  E-value=0.0039  Score=64.06  Aligned_cols=81  Identities=21%  Similarity=0.088  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||+||||..+++.....|++|+++++++++.+.+.+ ++.. .+  .|..+.. .+.+.+.+.+..+++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            67899999999999999998888889999999998887766543 4421 11  2433321 112233333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            998874

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.0029  Score=64.53  Aligned_cols=79  Identities=18%  Similarity=0.072  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCC-cEE--EeCCccchhHHHHH---HHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGA-DYV--VDHTIRELDRFANQ---ILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGA-d~v--Id~~~~~~~d~~~~---i~~~~~  179 (655)
                      +|++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+    .+. ..+  .|..+.  +++.+.   +.+..+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY--QSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH--HHHHHHHHHHHHhcC
Confidence            68999999999999999998888889999999998887655432    222 222  243332  233333   333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999999984

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0084  Score=61.43  Aligned_cols=77  Identities=27%  Similarity=0.271  Sum_probs=53.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CC-Cc-E--EEeCCccchhHHHHHHHh---c-CCCee
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LG-AD-Y--VVDHTIRELDRFANQILS---Y-GSELD  182 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LG-Ad-~--vId~~~~~~~d~~~~i~~---~-~~gvD  182 (655)
                      ++++|+||+|+||..+++.....|++|+++++++++.+.+.+ ++ .. .  .+|..+.  +++.+.+.+   . .+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDR--AAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCC
Confidence            479999999999999998777889999999998887766543 33 11 1  2354442  233333332   2 44799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.98  E-value=0.0014  Score=73.25  Aligned_cols=71  Identities=14%  Similarity=0.150  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHH-HHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVA-KAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~-~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +|++|+|.|+ |++|.++++.++..|+ +|+++.+++++.+ .+..+|++ +++..     +..+.+.    ++|+|++|
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l~----~aDvVI~a  249 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD-----ELPEALA----EADIVISS  249 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHhc----cCCEEEEC
Confidence            7899999999 9999999999999998 7989999988755 56778864 44331     3333332    68999999


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      +|++
T Consensus       250 T~s~  253 (423)
T PRK00045        250 TGAP  253 (423)
T ss_pred             CCCC
Confidence            9987

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=96.97  E-value=0.00028  Score=64.45  Aligned_cols=49  Identities=18%  Similarity=-0.027  Sum_probs=34.1

Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC--cchHHHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGSELDADHPGFT--DPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG--~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ||||+||||+++   ++     ...+++|+|+|++|  ++.  .+..++++| ++|++|.++
T Consensus         1 LGAd~vidy~~~---~~-----~~~~~~D~ViD~~g~~~~~--~~~~~~~~l-~~G~~v~i~   51 (127)
T PF13602_consen    1 LGADEVIDYRDT---DF-----AGPGGVDVVIDTVGQTGES--LLDASRKLL-PGGRVVSIG   51 (127)
T ss_dssp             CT-SEEEETTCS---HH-----HTTS-EEEEEESS-CCHHH--CGGGCCCTE-EEEEEEEE-
T ss_pred             CCcCEEecCCCc---cc-----cCCCCceEEEECCCCccHH--HHHHHHHHC-CCCEEEEEC
Confidence            799999999964   45     22448999999999  442  136666777 999999886

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0042  Score=63.31  Aligned_cols=81  Identities=15%  Similarity=-0.003  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE--E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY--V--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~--v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|.+|+|+||+|+||..+++.....|++|+.+++++++.+.+.++....  +  .|..+.. ...+.+.+.+..+++|++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6789999999999999998888788999999998876655444432222  2  3443321 012222333333478999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        94 i~~ag~   99 (255)
T PRK06841         94 VNSAGV   99 (255)
T ss_pred             EECCCC
Confidence            999985

>PRK06128 oxidoreductase; Provisional

Probab=96.96  E-value=0.009  Score=63.05  Aligned_cols=81  Identities=16%  Similarity=0.005  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH------HHHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG------VAKAYGLGADYV---VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k------~~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|.+|||+||+|+||..+++.....|++|+.+.++++.      .+.+++.|....   .|..+.. ..++.+.+.+..+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            68899999999999999998877789999887654321      122334454322   2444321 1123333333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus       134 ~iD~lV~nAg~  144 (300)
T PRK06128        134 GLDILVNIAGK  144 (300)
T ss_pred             CCCEEEECCcc
Confidence            79999998874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.95  E-value=0.0041  Score=63.99  Aligned_cols=81  Identities=15%  Similarity=0.090  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC-CCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL-GAD-YV--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L-GAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||+||||..+++.....|++|+++++++++.+.+.+. |.. ..  .|..+.. .++..+.+.+..+++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999988888899999999988777666543 321 11  2443321 112222333333478999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.+.|.
T Consensus        84 i~~Ag~   89 (262)
T TIGR03325        84 IPNAGI   89 (262)
T ss_pred             EECCCC
Confidence            988873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PF01842 ACT: ACT domain; InterPro: IPR002912 The ACT domain is found in a variety of contexts and is proposed to be a conserved regulatory binding fold

Probab=96.95  E-value=0.0029  Score=50.76  Aligned_cols=62  Identities=19%  Similarity=0.186  Sum_probs=48.4

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHcc
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSS  327 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~  327 (655)
                      .+.+.+++ +||.|+++++.|+++++|+..+.+++.+..  ...+++.... .....+++++|++.
T Consensus         2 ~v~v~~~d-rpG~l~~v~~~la~~~inI~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~   64 (66)
T PF01842_consen    2 RVRVIVPD-RPGILADVTEILADHGINIDSISQSSDKDG--VGIVFIVIVVDEEDLEKLLEELEAL   64 (66)
T ss_dssp             EEEEEEET-STTHHHHHHHHHHHTTEEEEEEEEEEESST--TEEEEEEEEEEGHGHHHHHHHHHHH
T ss_pred             EEEEEcCC-CCCHHHHHHHHHHHcCCCHHHeEEEecCCC--ceEEEEEEECCCCCHHHHHHHHHcc
Confidence            45667787 999999999999999999999999998877  3334444433 66777778877754

ACT domains are linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. The archetypical ACT domain is the C-terminal regulatory domain of 3-phosphoglycerate dehydrogenase (3PGDH), which folds with a ferredoxin-like topology. A pair of ACT domains form an eight-stranded antiparallel sheet with two molecules of allosteric inhibitor serine bound in the interface. Biochemical exploration of a few other proteins containing ACT domains supports the suggestions that these domains contain the archetypical ACT structure [].; GO: 0016597 amino acid binding, 0008152 metabolic process; PDB: 3L76_B 2F06_B 3NRB_C 1Y7P_C 2QMX_A 2DT9_A 2ZHO_D 3K5P_A 3TVI_K 3C1M_C ....

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0052  Score=61.51  Aligned_cols=81  Identities=16%  Similarity=-0.014  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH----HHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK----AYGLGADYV-VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~----a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      +|.+++|+|++|+||..+++.....|++|+++++++++...    +.+.++..+ .|..+.. .....+.+.+..+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            58899999999999999998888889999999997765332    223344332 2333321 01122333333347999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      |+.+.|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9998874

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.004  Score=64.21  Aligned_cols=79  Identities=19%  Similarity=0.149  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-EE--EeCCccchhHHH---HHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-YV--VDHTIRELDRFA---NQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~v--Id~~~~~~~d~~---~~i~~~~~  179 (655)
                      +|.+++|+|++|+||...++.....|++|+++++++++.+.+.    ..|.. .+  +|.++.  +++.   +.+.+..+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHP--EATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcC
Confidence            6889999999999999999988889999999999887665442    22322 22  455443  1222   22322234


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK09242 tropinone reductase; Provisional

Probab=96.92  E-value=0.0067  Score=62.03  Aligned_cols=81  Identities=19%  Similarity=0.098  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hC--CCcE---EEeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GL--GADY---VVDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~L--GAd~---vId~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|.+++|+|++|+||..+++.....|++|+++++++++.+.+.    ..  +...   ..|..+.. ..++.+.+.+..+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            6889999999999999999888888999999999887665442    12  2221   12444321 1123333433345


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.005  Score=64.00  Aligned_cols=79  Identities=23%  Similarity=0.121  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE--E--EeCCccchhHHHH---HHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY--V--VDHTIRELDRFAN---QILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~--v--Id~~~~~~~d~~~---~i~~~~~gvD  182 (655)
                      .+++|+|+||+|+||..+++.....|++|+++++++++.+.+.+.....  .  .|..+.  +.+.+   .+.+..+++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDF--DAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCH--HHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999888888999999999988776665532221  1  344442  12222   2222234689


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.+.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999886

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.87  E-value=0.0081  Score=63.73  Aligned_cols=90  Identities=13%  Similarity=0.184  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|++|+|.|. |++|.++++.++.+|++|++.++++++.+.+.+.|+.. ++.     +++.+.+.    +.|+|+.+++
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~~~l~----~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-FPL-----NKLEEKVA----EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-ecH-----HHHHHHhc----cCCEEEECCC
Confidence            7899999999 99999999999999999999999988887777777653 221     13333332    6899999997


Q ss_pred             cchHHHHHHHHHHhccccceEEE
Q psy14589        190 DPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ...  .-...++.++++..++=+
T Consensus       219 ~~i--i~~~~l~~~k~~aliIDl  239 (287)
T TIGR02853       219 ALV--LTADVLSKLPKHAVIIDL  239 (287)
T ss_pred             hHH--hCHHHHhcCCCCeEEEEe
Confidence            653  024567778876544444

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0049  Score=63.74  Aligned_cols=81  Identities=20%  Similarity=0.088  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|.+++|+||+||||..+++.....|++|+++++++++.+.+ ..++...+  .|..+.. .+.+.+.+.+..+++|+++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999999987777899999999988877654 34552222  3544431 1122333443335799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus        84 ~~ag~   88 (273)
T PRK07825         84 NNAGV   88 (273)
T ss_pred             ECCCc
Confidence            99884

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.86  E-value=0.014  Score=60.95  Aligned_cols=81  Identities=16%  Similarity=0.136  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChH---HHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPV---GVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~---k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+  +|||.++++.....|++|+.++++++   +.+.+ .++|...+  .|.++.. .+.+.+.+.+..++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999997  79999998877778999999888742   33333 34554322  4554431 12334444443457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        84 iDilVnnAG~   93 (274)
T PRK08415         84 IDFIVHSVAF   93 (274)
T ss_pred             CCEEEECCcc
Confidence            9999999884

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.017  Score=58.64  Aligned_cols=76  Identities=14%  Similarity=-0.035  Sum_probs=50.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC-cE--EEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA-DY--VVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA-d~--vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .+++|+||+||+|..++......|++|+++++++++.+.+.+.+. ..  ..|.++.  +++.+.+.+.....|+++.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~d~~i~~a   79 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDH--PGTKAALSQLPFIPELWIFNA   79 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH--HHHHHHHHhcccCCCEEEEcC
Confidence            469999999999998877777789999999999888776654331 11  2344442  344444544333456665555


Q ss_pred             C
Q psy14589        189 T  189 (655)
Q Consensus       189 G  189 (655)
                      |
T Consensus        80 g   80 (240)
T PRK06101         80 G   80 (240)
T ss_pred             c
Confidence            4

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.01  Score=59.61  Aligned_cols=79  Identities=16%  Similarity=0.065  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC---cEEE--eCCccchhHHHHHHH---hcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA---DYVV--DHTIRELDRFANQIL---SYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA---d~vI--d~~~~~~~d~~~~i~---~~~~g  180 (655)
                      .+.+|+|+||+|++|..+++.....|++|+++++++++.+.+ .+++.   -+++  |..+.  +++.+.+.   +..++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDE--ADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH--HHHHHHHHHHHHHcCC
Confidence            578999999999999999987777899999999988776544 33321   1222  33332  23333333   32347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0064  Score=62.51  Aligned_cols=81  Identities=17%  Similarity=0.088  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hC-CCcEE----EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GL-GADYV----VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~L-GAd~v----Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++++|+||+||||...++.....|++|+++++++++.+.+.    +. +...+    .|..+.. ..++.+.+.+..+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            6889999999999999999888888999999999887765442    21 11122    3544431 1123333433335


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.82  E-value=0.0063  Score=65.57  Aligned_cols=98  Identities=13%  Similarity=0.010  Sum_probs=69.1

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ..+ ++|++||..|+ | .|..++.+|+..+.  +|++++.+++..+.++    +.|.+.+.....    |..+..... 
T Consensus        76 L~i-~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g----D~~~~~~~~-  147 (322)
T PRK13943         76 VGL-DKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG----DGYYGVPEF-  147 (322)
T ss_pred             cCC-CCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC----Chhhccccc-
Confidence            456 78999999998 4 69999999998864  6999999988665554    477765543222    222222211 


Q ss_pred             CCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+|+|+.+.|...  .....++.|++||++++.
T Consensus       148 ~~fD~Ii~~~g~~~--ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDE--VPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHH--hHHHHHHhcCCCCEEEEE
Confidence            36999998877652  145778899999998874

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=96.77  E-value=0.0032  Score=63.40  Aligned_cols=97  Identities=15%  Similarity=0.106  Sum_probs=68.8

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH----HHhCCCcEEE-eCCccchhHHHHHHHhcC
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK----AYGLGADYVV-DHTIRELDRFANQILSYG  178 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~----a~~LGAd~vI-d~~~~~~~d~~~~i~~~~  178 (655)
                      ...+ ++|++||-.|+  |.|-.++-+|+..| +|+.+.+.++-.+.    ++.+|.+.|. ...+.. ..|.    + .
T Consensus        67 ~L~~-~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~-~G~~----~-~  136 (209)
T COG2518          67 LLEL-KPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS-KGWP----E-E  136 (209)
T ss_pred             HhCC-CCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc-cCCC----C-C
Confidence            3456 89999999996  78889999999888 99999988764444    4568986542 222210 0011    0 1


Q ss_pred             CCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..+|.|+-+.+.+.  .-+..++.|++|||+|..
T Consensus       137 aPyD~I~Vtaaa~~--vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         137 APYDRIIVTAAAPE--VPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             CCcCEEEEeeccCC--CCHHHHHhcccCCEEEEE
Confidence            27999998887774  036778899999999986

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.0084  Score=61.22  Aligned_cols=81  Identities=17%  Similarity=0.108  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+++|+||+||||...++.....|++|+.+++++++.+.+    ++.|....   .|..+.. .+.+.+.+.+..+++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999987777899999999988776554    33443322   2443321 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.0072  Score=60.69  Aligned_cols=77  Identities=22%  Similarity=0.174  Sum_probs=53.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE--EeCCccchhHHHHHHHhcC-CCeeEEEeCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV--VDHTIRELDRFANQILSYG-SELDADHPGF  188 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~~-~gvDvV~D~v  188 (655)
                      .+|+|+|++|++|...++.....|++|+++++++++.+.+++++...+  +|..+.  +++.+.+.+.. +++|+++.++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDP--ASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCH--HHHHHHHHHhhcCCCCEEEEcC
Confidence            479999999999999888777789999999998877766665543333  343332  23333333332 3689999887


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            64

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.01  Score=62.74  Aligned_cols=82  Identities=18%  Similarity=0.110  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+|+|+||+||||...++.+...|++|+++++++++.+.+.    +.|.+. +  .|..+.. ...+.+.+.+..+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999888888999999999887765542    234322 2  2433321 112233333333479


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+++.++|..
T Consensus       119 d~li~~AG~~  128 (293)
T PRK05866        119 DILINNAGRS  128 (293)
T ss_pred             CEEEECCCCC
Confidence            9999998854

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0089  Score=63.72  Aligned_cols=81  Identities=17%  Similarity=0.116  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-C-CCc-E--EEeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-L-GAD-Y--VVDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-L-GAd-~--vId~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|.+++|+||+||||..+++.....|++|+.+++++++.+.+.    + . +.. .  .+|..+.. ...+.+.+.+..+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            6889999999999999998877778999999999887765442    1 1 221 1  13544421 1223344444445


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            79999988874

>PRK06196 oxidoreductase; Provisional

Probab=96.72  E-value=0.0076  Score=64.07  Aligned_cols=81  Identities=22%  Similarity=0.263  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC-CcEE-EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG-ADYV-VDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG-Ad~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|.+|+|+||+||||..+++.....|++|+++++++++.+.+. ++. ...+ .|..+.. ...+.+.+.+..+++|+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            6789999999999999998877778999999999887765543 332 2211 3444321 1122333333334799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            98874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.71  E-value=0.0063  Score=61.55  Aligned_cols=79  Identities=13%  Similarity=0.024  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC--CcE-E--EeCCccchhHHHHHHH---hcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG--ADY-V--VDHTIRELDRFANQIL---SYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG--Ad~-v--Id~~~~~~~d~~~~i~---~~~~g  180 (655)
                      .+.+|+|+||+|++|..+++.....|++|+++++++++.+.+. .+.  ... .  .|..+.  +++.+.+.   +..++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE--ADVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHhCC
Confidence            5779999999999999999888888999999999987765542 222  211 1  233332  23333222   22347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+|+.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998875

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.67  E-value=0.008  Score=67.06  Aligned_cols=71  Identities=17%  Similarity=0.127  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHH-HHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVA-KAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~-~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +|++|+|.|+ |.+|.++++.++..| .+|++++++.++.+ .++.+|+. .++..     ++.+.+.    ++|+|+.|
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~-----~l~~~l~----~aDvVi~a  247 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE-----DLEEYLA----EADIVISS  247 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH-----HHHHHHh----hCCEEEEC
Confidence            7899999999 999999999999999 48999999888754 56778874 33321     3333343    68999999


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      +|++
T Consensus       248 T~s~  251 (417)
T TIGR01035       248 TGAP  251 (417)
T ss_pred             CCCC
Confidence            9887

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.0096  Score=62.15  Aligned_cols=81  Identities=21%  Similarity=0.148  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+++|+||+||||..+++.....|++|+.+++++++.+.+    ++.|...   ..|.++.. ..++.+.+.+..+++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999988778899999999887665543    2345432   13444321 112233333334579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999998884

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.66  E-value=0.01  Score=60.18  Aligned_cols=79  Identities=14%  Similarity=0.059  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhCCCc-EE--EeCCccchhHHH---HHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGLGAD-YV--VDHTIRELDRFA---NQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~LGAd-~v--Id~~~~~~~d~~---~~i~~~~~gv  181 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++.  ..+.+++++.. .+  .|..+.  +++.   +.+.+..+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDI--EAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCH--HHHHHHHHHHHHHcCCC
Confidence            6889999999999999988877778999999987652  12333455532 12  344432  2333   3333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.66  E-value=0.012  Score=60.12  Aligned_cols=81  Identities=15%  Similarity=0.048  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+++|+|++|+||..+++.....|++|+++++++++.+.+    ++.|+...   .|..+.. .+++.+.+.+..+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999988888899999999988655433    34555432   2333321 112223333333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999998875

>PRK06194 hypothetical protein; Provisional

Probab=96.65  E-value=0.0085  Score=62.34  Aligned_cols=80  Identities=19%  Similarity=0.154  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccchhHHH---HHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRELDRFA---NQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~---~~i~~~~~  179 (655)
                      .+.+|||+||+|+||..+++.....|++|++++++.++.+.+.    ..|... +  .|.++.  +++.   +.+.+..+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA--AQVEALADAALERFG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHcC
Confidence            5789999999999999999887788999999998876654432    224332 1  243332  2332   23333334


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        83 ~id~vi~~Ag~~   94 (287)
T PRK06194         83 AVHLLFNNAGVG   94 (287)
T ss_pred             CCCEEEECCCCC
Confidence            789999998863

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.0094  Score=60.89  Aligned_cols=79  Identities=15%  Similarity=0.024  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHH----HHHhCCCcE---EEeCCccchhHHHHH---HHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVA----KAYGLGADY---VVDHTIRELDRFANQ---ILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~----~a~~LGAd~---vId~~~~~~~d~~~~---i~~~~  178 (655)
                      ++.+|+|+|++|+||..+++.....|++ |+++++++++.+    .+++.|...   ..|..+.  +++.+.   +.+.-
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   82 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV--EDCRRVVAAADEAF   82 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH--HHHHHHHHHHHHHh
Confidence            6789999999999999999988889998 999988876554    233455432   2355443  223332   22222


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.+.|.
T Consensus        83 g~id~li~~ag~   94 (260)
T PRK06198         83 GRLDALVNAAGL   94 (260)
T ss_pred             CCCCEEEECCCc
Confidence            479999999985

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.65  E-value=0.0057  Score=64.40  Aligned_cols=103  Identities=18%  Similarity=0.039  Sum_probs=64.4

Q ss_pred             HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE--EEeCCccchhHHHH
Q psy14589         99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY--VVDHTIRELDRFAN  172 (655)
Q Consensus        99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~--vId~~~~~~~d~~~  172 (655)
                      ..+.+..++ ++|++||-.|+  |-|.+++.+|+..|++|++++.|++..+.++    +.|...  .|...     |+. 
T Consensus        52 ~~~~~~~~l-~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-----D~~-  122 (273)
T PF02353_consen   52 DLLCEKLGL-KPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-----DYR-  122 (273)
T ss_dssp             HHHHTTTT---TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES------GG-
T ss_pred             HHHHHHhCC-CCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-----ecc-
Confidence            345577788 99999999998  5888999999999999999999998877764    566321  12111     111 


Q ss_pred             HHHhcCCCeeEE-----EeCCCcchH-HHHHHHHHHhccccceEEEe
Q psy14589        173 QILSYGSELDAD-----HPGFTDPVY-RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       173 ~i~~~~~gvDvV-----~D~vG~~~~-~~l~~~l~~l~~gGrlv~v~  213 (655)
                         +....+|.|     ++.+|.+.+ .-++.+-+.|+|||++++=.
T Consensus       123 ---~~~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  123 ---DLPGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             ---G---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             ---ccCCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence               111257776     467775522 34688888999999998653

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.011  Score=60.35  Aligned_cols=79  Identities=19%  Similarity=0.123  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHHH---HHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFAN---QILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~~---~i~~~~~  179 (655)
                      ++.+|+|+||+|+||..+++.....|++|+++++++++.+.+.    +.|..   ...|..+.  +++..   .+.+..+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE--DQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH--HHHHHHHHHHHHHcC
Confidence            6789999999999999999888889999999999887665443    22332   22344332  22332   2322234


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            78999998874

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.65  E-value=0.014  Score=52.44  Aligned_cols=99  Identities=17%  Similarity=0.125  Sum_probs=66.3

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHH----hCCCcEE--EeCCccchhHHHHHHHhcC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAY----GLGADYV--VDHTIRELDRFANQILSYG  178 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~----~LGAd~v--Id~~~~~~~d~~~~i~~~~  178 (655)
                      .+ +++++|+-.|+  |.|..+..+++..+ .+|++++.++...+.++    ..+...+  +...      .........
T Consensus        16 ~~-~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~------~~~~~~~~~   86 (124)
T TIGR02469        16 RL-RPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD------APEALEDSL   86 (124)
T ss_pred             CC-CCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc------ccccChhhc
Confidence            44 57889999998  44999999999874 59999999988777654    3454332  2211      111111112


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+|+|+-..+.. ..+.++.+.+.|++||++++-+
T Consensus        87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        87 PEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             CCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            3689988654332 2345889999999999988754

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.008  Score=61.35  Aligned_cols=80  Identities=19%  Similarity=0.138  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-EEE--eCCccc-hhHHHHHHHhcCCCee
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-YVV--DHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~vI--d~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      |++++|+|++|+||..+++.....|++|+++++++++.+.+.    +.+.. .++  |.++.. ...+.+.+.+..+++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            578999999999999999988889999999998877655442    23322 223  443321 1122233333334789


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.+.|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.0085  Score=60.75  Aligned_cols=81  Identities=17%  Similarity=0.097  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-E--EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-Y--VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~--vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+++|+|++|+||..+++.....|++|+++++++++.+.+.    +.+.. .  ..|..+.. ..++.+.+.+..+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999877778999999999876554432    22321 1  23444321 112233333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+||.++|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK09186 flagellin modification protein A; Provisional

Probab=96.63  E-value=0.012  Score=59.83  Aligned_cols=78  Identities=15%  Similarity=0.049  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-Hh----CCCcE----EEeCCccchhHHHH---HHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YG----LGADY----VVDHTIRELDRFAN---QILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~----LGAd~----vId~~~~~~~d~~~---~i~~~  177 (655)
                      +|.+|+|+||+|+||..++......|++|+++++++++.+.+ .+    .+...    ..|..+.  +++.+   .+.+.
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ--ESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCH--HHHHHHHHHHHHH
Confidence            578999999999999999988888899999999888776544 22    23221    2354443  23333   33332


Q ss_pred             CCCeeEEEeCCC
Q psy14589        178 GSELDADHPGFT  189 (655)
Q Consensus       178 ~~gvDvV~D~vG  189 (655)
                      .+++|+++.+.|
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence            346899999885

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.0096  Score=60.64  Aligned_cols=75  Identities=23%  Similarity=0.099  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      +.+|+|+||+|+||..+++.+...|++|+++++++++.+.++    ..|... +  .|..+.  +++.+.   ...++|+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~---~~~~id~   76 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA--IDRAQA---AEWDVDV   76 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH--HHHHHH---hcCCCCE
Confidence            468999999999999999998889999999999877655543    233221 1  344432  122221   2237999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.+.|.
T Consensus        77 vi~~ag~   83 (257)
T PRK09291         77 LLNNAGI   83 (257)
T ss_pred             EEECCCc
Confidence            9999873

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.61  E-value=0.012  Score=59.36  Aligned_cols=80  Identities=23%  Similarity=0.224  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +.+++|+||+||||..+++.....|++|+++++++++ .+.++..|+..+ .|..+.. .+.+.+.+.+..+++|+++.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            4689999999999999998887889999999887644 334455665322 3443321 112333333333479999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      .|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.61  E-value=0.013  Score=58.72  Aligned_cols=79  Identities=19%  Similarity=0.045  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccchhHHHHHHHh---cCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRELDRFANQILS---YGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~~i~~---~~~  179 (655)
                      ++.+|+|+||+|++|..+++.....|.+|+++++++++.+.+    ++.|....   .|..+.  +++.+.+.+   .-+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~   81 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE--AAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH--HHHHHHHHHHHHHhC
Confidence            567899999999999999988888899999999988765443    33454332   244432  123333322   223


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999999876

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.60  E-value=0.0089  Score=61.04  Aligned_cols=81  Identities=17%  Similarity=0.105  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+|+|+||+|++|..+++.....|++|+++++++++.+.+    ++.|... .  .|..+.. ...+.+.+.+..+++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            688999999999999999988777899999999987765443    2334322 1  2444421 112223333333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.59  E-value=0.013  Score=60.09  Aligned_cols=81  Identities=16%  Similarity=0.125  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCCCcE---EEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLGADY---VVDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      .|++++|+||+||||..+++.....|++|+++++++..  .+.+++.|...   .+|..+.. .+.+.+.+.+..+++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68899999999999999998887899999888765422  22334555432   23554431 11223333333457999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.+.|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9998874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.59  E-value=0.011  Score=61.67  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHH---HHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGV---AKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~---~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+||++  |||..+++.....|++|+.++++++..   +.+ .++|....  .|..+.. .+.+.+.+.+..+.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            688999999986  999999887777899999888765322   222 34564433  3444431 12333444443357


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        86 iD~lVnnAG~   95 (271)
T PRK06505         86 LDFVVHAIGF   95 (271)
T ss_pred             CCEEEECCcc
Confidence            9999999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=96.59  E-value=0.0073  Score=56.69  Aligned_cols=75  Identities=15%  Similarity=0.106  Sum_probs=55.6

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHH-hCCCc--EEEeCCccchhHHHHHHHhcCCC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAY-GLGAD--YVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~-~LGAd--~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      +.+  +|.+|+|.|+ ||+|..++..+...|++ |+.+.|+.+|.+.+. .++..  .++++.     ++.+.+.    .
T Consensus         8 ~~l--~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~~----~   75 (135)
T PF01488_consen    8 GDL--KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE-----DLEEALQ----E   75 (135)
T ss_dssp             STG--TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG-----GHCHHHH----T
T ss_pred             CCc--CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH-----HHHHHHh----h
Confidence            355  7999999999 99999999999999995 999999998877664 45332  344443     2333333    5


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+|+.|++..
T Consensus        76 ~DivI~aT~~~   86 (135)
T PF01488_consen   76 ADIVINATPSG   86 (135)
T ss_dssp             ESEEEE-SSTT
T ss_pred             CCeEEEecCCC
Confidence            89999999877

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1205|consensus

Probab=96.58  E-value=0.0051  Score=64.89  Aligned_cols=80  Identities=15%  Similarity=0.061  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-EE----eCCccchhHHHH---HHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-VV----DHTIRELDRFAN---QILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-vI----d~~~~~~~d~~~---~i~~~  177 (655)
                      .|+.|+|+|||+|||..++--...+|++++.+++..++++.+    +++|+.. ++    |-++.  ++..+   ++.+.
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~--~~~~~~~~~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDE--ESVKKFVEWAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCH--HHHHHHHHHHHHh
Confidence            789999999999999876655555799888888877766655    5566554 32    33332  23333   33333


Q ss_pred             CCCeeEEEeCCCcc
Q psy14589        178 GSELDADHPGFTDP  191 (655)
Q Consensus       178 ~~gvDvV~D~vG~~  191 (655)
                      -+++|+.++..|-.
T Consensus        89 fg~vDvLVNNAG~~  102 (282)
T KOG1205|consen   89 FGRVDVLVNNAGIS  102 (282)
T ss_pred             cCCCCEEEecCccc
Confidence            45899999887743

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.0091  Score=61.17  Aligned_cols=81  Identities=17%  Similarity=0.011  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h-----CCCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G-----LGAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~-----LGAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++|+|+|++||||..+++.....|++|+.+++++++.+.+. +     .+.. .+  .|..+.. ...+.+.+.+..+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            6789999999999999999888788999999999877665442 2     2221 11  2444321 1122333333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            79999998874

>KOG1201|consensus

Probab=96.55  E-value=0.008  Score=63.38  Aligned_cols=82  Identities=20%  Similarity=0.146  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH----HHHHHhCC-C-cEEEeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG----VAKAYGLG-A-DYVVDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k----~~~a~~LG-A-d~vId~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|+.|||+||++|+|...++=...+|++++..|.+.+.    .+.+++.| | ..+.|-++.+ ....++++++.-+.+|
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~  116 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD  116 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence            89999999999999987766555579988888776543    34455555 1 2334555431 1234566666666899


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      ++++.+|--
T Consensus       117 ILVNNAGI~  125 (300)
T KOG1201|consen  117 ILVNNAGIV  125 (300)
T ss_pred             EEEeccccc
Confidence            999988753

>PRK08589 short chain dehydrogenase; Validated

Probab=96.54  E-value=0.011  Score=61.40  Aligned_cols=80  Identities=24%  Similarity=0.190  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH-H---HhCCCc---EEEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK-A---YGLGAD---YVVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-a---~~LGAd---~vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+||+||||...++.....|++|++++++ ++.+. +   ++.|..   ..+|..+.. ...+.+.+.+..+++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            68899999999999999888777789999999988 44332 2   233422   124444421 112333444334578


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.54  E-value=0.012  Score=62.67  Aligned_cols=80  Identities=25%  Similarity=0.273  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC---Cc-EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG---AD-YV--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG---Ad-~v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .+.+|+|+||+||||..+++.....|++|+++++++++.+.+. +++   .. .+  .|..+.. ...+.+.+.+..+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            5789999999999999999877778999999999887765542 332   11 11  3444321 112233333334469


Q ss_pred             eEEEeCCC
Q psy14589        182 DADHPGFT  189 (655)
Q Consensus       182 DvV~D~vG  189 (655)
                      |+++.++|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999887

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.53  E-value=0.015  Score=61.90  Aligned_cols=72  Identities=19%  Similarity=0.174  Sum_probs=52.5

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +|+|+||+|-+|..+++.+...|.+|++++++.++...+...|++.+. |..+.  +++.+.+    .++|+|+.+++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~--~~l~~al----~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLP--ETLPPSF----KGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCH--HHHHHHH----CCCCEEEECCCC
Confidence            699999999999999988888899999999987766555566765442 33332  2333333    268999998764

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.013  Score=59.45  Aligned_cols=81  Identities=12%  Similarity=0.045  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCC-C
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGS-E  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~-g  180 (655)
                      .|.+++|+|+++|+|...++-....|++|+.+++++++++.+    ++.|....   .|..+.. ..++.+.+.+..+ +
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            688999999999999988887777899999999988776544    33454322   2433321 1123333333334 7


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        84 iD~li~nag~   93 (227)
T PRK08862         84 PDVLVNNWTS   93 (227)
T ss_pred             CCEEEECCcc
Confidence            9999999874

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.012  Score=60.23  Aligned_cols=78  Identities=21%  Similarity=0.097  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-EE----EeCCccchhHHHH---HHHhcCCCe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-YV----VDHTIRELDRFAN---QILSYGSEL  181 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~v----Id~~~~~~~d~~~---~i~~~~~gv  181 (655)
                      +.+|+|+||+|++|..+++.....|++|+++++++++.+.+.+ +... .+    .|.++.  +++.+   .+.+..+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA--DALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH--HHHHHHHHHHHHhCCCC
Confidence            4689999999999999998777789999999998877665432 2211 11    344432  23333   233323468


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.038  Score=55.72  Aligned_cols=79  Identities=15%  Similarity=0.081  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHH----HHHhCCCc-EE--EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVA----KAYGLGAD-YV--VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~----~a~~LGAd-~v--Id~~~~~~~d~~~---~i~~~~  178 (655)
                      ++.+++|+|++|++|..+++.....|++|+.+.++.. +.+    .+.+.+.. .+  .|..+.  +++.+   .+.+..
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA--AAVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence            6789999999999999999888888999887765432 222    22334432 11  233332  22333   333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (245)
T PRK12937         82 GRIDVLVNNAGV   93 (245)
T ss_pred             CCCCEEEECCCC
Confidence            478999998874

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.013  Score=59.16  Aligned_cols=81  Identities=23%  Similarity=0.238  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc----EEEeCCcc---chhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD----YVVDHTIR---ELDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd----~vId~~~~---~~~d~~~~i~~~~  178 (655)
                      +|.+|+|+|++|++|..+++.....|++|+++++++++.+.+.    +.+..    .-+|..+.   ..+.+.+.+.+..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            5789999999999999999888888999999999887665442    22321    11333211   1112333444333


Q ss_pred             -CCeeEEEeCCCc
Q psy14589        179 -SELDADHPGFTD  190 (655)
Q Consensus       179 -~gvDvV~D~vG~  190 (655)
                       +.+|+++.++|.
T Consensus        85 ~~~id~vi~~ag~   97 (239)
T PRK08703         85 QGKLDGIVHCAGY   97 (239)
T ss_pred             CCCCCEEEEeccc
Confidence             478999998884

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.51  E-value=0.0034  Score=70.22  Aligned_cols=92  Identities=16%  Similarity=0.078  Sum_probs=61.0

Q ss_pred             cCCCCCCCCCEEE----EEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EEEeCCccchhHHHHHHHhc
Q psy14589        103 SKPLYTPEPDTLF----IIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       103 ~~~~l~~~Gd~VL----I~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~~~d~~~~i~~~  177 (655)
                      ...++ ++|++|+    |+||+||+|..++|+++..|++|+++.+++.+....+..+.+ .++|.+..   +..+.+...
T Consensus        27 ~l~~~-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~l~~~  102 (450)
T PRK08261         27 PLRRY-RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGI---TDPADLKAL  102 (450)
T ss_pred             cccCC-CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCC---CCHHHHHHH
Confidence            44566 7899998    999999999999999999999999987666544333444444 34554432   111122111


Q ss_pred             CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        178 GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                                     ++.....++.|.++||+|.++
T Consensus       103 ---------------~~~~~~~l~~l~~~griv~i~  123 (450)
T PRK08261        103 ---------------YEFFHPVLRSLAPCGRVVVLG  123 (450)
T ss_pred             ---------------HHHHHHHHHhccCCCEEEEEc
Confidence                           122566677777888887775

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.51  E-value=0.013  Score=62.85  Aligned_cols=81  Identities=14%  Similarity=0.061  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCcE----EEeCCccchhHHHHHHHhc-C
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGADY----VVDHTIRELDRFANQILSY-G  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd~----vId~~~~~~~d~~~~i~~~-~  178 (655)
                      +.|.+++|+||+||||...++.....|++|+.+++++++++.+.    + .+...    .+|..+. ..+..+.+.+. +
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~l~~~~~  129 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGD-IDEGVKRIKETIE  129 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCC-cHHHHHHHHHHhc
Confidence            36899999999999999888766668999999999998876542    1 22112    2344321 01233334333 3


Q ss_pred             C-CeeEEEeCCCc
Q psy14589        179 S-ELDADHPGFTD  190 (655)
Q Consensus       179 ~-gvDvV~D~vG~  190 (655)
                      + ++|+++.++|.
T Consensus       130 ~~didilVnnAG~  142 (320)
T PLN02780        130 GLDVGVLINNVGV  142 (320)
T ss_pred             CCCccEEEEecCc
Confidence            2 56789988874

>PRK07985 oxidoreductase; Provisional

Probab=96.50  E-value=0.033  Score=58.76  Aligned_cols=81  Identities=15%  Similarity=-0.009  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--HHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP--VGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~  179 (655)
                      +|.+++|+||+||||..+++.....|++|+++.++.  ++.+.+    ++.|...   ..|..+.. ...+.+.+.+..+
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            678999999999999999988878899998876542  222222    3344322   23444321 1122233333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus       128 ~id~lv~~Ag~  138 (294)
T PRK07985        128 GLDIMALVAGK  138 (294)
T ss_pred             CCCEEEECCCC
Confidence            78999988773

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.033  Score=58.64  Aligned_cols=81  Identities=12%  Similarity=-0.004  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HH----HHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VA----KAYGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~----~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+++|+||+|+||..+++.....|++|+.+++++++ .+    .++..|....   .|..+.. .+++.+.+.+..++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68899999999999999888777789999888776432 21    2233343321   3443321 11223333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       125 iD~lI~~Ag~  134 (290)
T PRK06701        125 LDILVNNAAF  134 (290)
T ss_pred             CCEEEECCcc
Confidence            8999988874

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.0099  Score=61.27  Aligned_cols=74  Identities=14%  Similarity=-0.022  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHHHhCCCcEE--EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKAYGLGADYV--VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|++++|+||+||+|..+++.....|++|+++++++ ++.+... .+....  .|.++.      +.+.+.-+++|+++.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~------~~~~~~~~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKE------ESLDKQLASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCH------HHHHHhcCCCCEEEE
Confidence            578999999999999999988888899999998875 2222211 122222  344332      122233346999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9985

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.013  Score=60.44  Aligned_cols=82  Identities=16%  Similarity=0.107  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHH-HHH----HHhCCCc--EE--EeCCccc-hhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVG-VAK----AYGLGAD--YV--VDHTIRE-LDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k-~~~----a~~LGAd--~v--Id~~~~~-~~d~~~~i~~~  177 (655)
                      ..+.+|+|+||+||+|...++-.... |++|+++++++++ ++.    +++.|..  ++  .|..+.. ..++.+.+.+.
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            56789999999999999998765556 5899999988765 332    3344432  22  3444321 01223333332


Q ss_pred             CCCeeEEEeCCCcc
Q psy14589        178 GSELDADHPGFTDP  191 (655)
Q Consensus       178 ~~gvDvV~D~vG~~  191 (655)
                       +++|+++.+.|..
T Consensus        86 -g~id~li~~ag~~   98 (253)
T PRK07904         86 -GDVDVAIVAFGLL   98 (253)
T ss_pred             -CCCCEEEEeeecC
Confidence             4799988877654

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.019  Score=58.80  Aligned_cols=78  Identities=18%  Similarity=0.150  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCc-EE--EeCCccchhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGAD-YV--VDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd-~v--Id~~~~~~~d~~~~i~~~~~gv  181 (655)
                      +|.+++|+|++|++|..+++.....|++|+++++++++.+.+.    + .|.. .+  .|..+.  +++.+.+.+ .+.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~--~~~~~~~~~-~g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP--EAREQLAAE-AGDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH--HHHHHHHHH-hCCC
Confidence            5789999999999999999888888999999999887665532    1 2322 12  233332  233333333 2478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        83 d~lv~~ag~   91 (259)
T PRK06125         83 DILVNNAGA   91 (259)
T ss_pred             CEEEECCCC
Confidence            999998875

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.49  E-value=0.013  Score=56.96  Aligned_cols=90  Identities=11%  Similarity=-0.007  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      -.|++++|.|= |-+|.-.++.+|.+|++|++++.+|-+.-.|..-|... .        .+.+.+.    ..|+++.++
T Consensus        21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v-~--------~~~~a~~----~adi~vtaT   86 (162)
T PF00670_consen   21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEV-M--------TLEEALR----DADIFVTAT   86 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EE-E---------HHHHTT----T-SEEEE-S
T ss_pred             eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEe-c--------CHHHHHh----hCCEEEECC
Confidence            48999999999 99999999999999999999999998877777677642 2        1222222    469999999


Q ss_pred             CcchHHHHHHHHHHhccccceEEEe
Q psy14589        189 TDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |... -.-.+-++.|++|.-+..+|
T Consensus        87 G~~~-vi~~e~~~~mkdgail~n~G  110 (162)
T PF00670_consen   87 GNKD-VITGEHFRQMKDGAILANAG  110 (162)
T ss_dssp             SSSS-SB-HHHHHHS-TTEEEEESS
T ss_pred             CCcc-ccCHHHHHHhcCCeEEeccC
Confidence            9872 00357788999877666665

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.011  Score=60.36  Aligned_cols=81  Identities=15%  Similarity=0.071  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY---VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+|++||||..+++.....|++|+++++++++.+.+.    ..|...   ..|..+.. .+++.+.+.+..+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6889999999999999999888888999999999887765542    234321   13444321 112233333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999998875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.48  E-value=0.012  Score=57.96  Aligned_cols=91  Identities=21%  Similarity=0.180  Sum_probs=61.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC---CCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL---GADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L---GAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +|.|+||||-+|...++=|+.+|-+|.+++|++.|.......   -+| ++|.+     .+.+.+    .|+|+|+++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~D-ifd~~-----~~a~~l----~g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKD-IFDLT-----SLASDL----AGHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeeccc-ccChh-----hhHhhh----cCCceEEEecc
Confidence            688999999999999999999999999999999887543221   111 12211     111222    28999999998


Q ss_pred             cc--hH-----HHHHHHHHHhcccc--ceEEEe
Q psy14589        190 DP--VY-----RARRKYFADLAFNY--KHFFFF  213 (655)
Q Consensus       190 ~~--~~-----~~l~~~l~~l~~gG--rlv~v~  213 (655)
                      ..  ..     ...+..+..|+..|  |+++||
T Consensus        72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVG  104 (211)
T COG2910          72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVG  104 (211)
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEc
Confidence            76  10     11233556666534  788886

>PRK08264 short chain dehydrogenase; Validated

Probab=96.47  E-value=0.012  Score=59.23  Aligned_cols=77  Identities=23%  Similarity=0.204  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .+.+|+|+||+|++|..+++.+...|+ +|+++++++++.+. ....+..+ .|..+.  +++.+.+.+ .+.+|+|+.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~--~~~~~~~~~-~~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDP--ASVAAAAEA-ASDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCH--HHHHHHHHh-cCCCCEEEEC
Confidence            578899999999999999998888999 99999988766543 11112111 244332  233333333 2368999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            887

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.017  Score=58.76  Aligned_cols=81  Identities=16%  Similarity=0.115  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+++|+||+|++|..+++.....|++|+++++++++.+.+    ++.|... +  .|..+.. ..++.+.+.+..+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999887777899999999987765433    3344321 2  3433321 112233333333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999998875

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.45  E-value=0.018  Score=58.95  Aligned_cols=79  Identities=20%  Similarity=0.176  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHH---HHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFA---NQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~---~~i~~~~~  179 (655)
                      +|.+++|+||+|+||..+++.....|++|+.++++.++.+.+.    ..+..   ...|..+.  +++.   +.+.+..+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~--~~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADE--ADIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH--HHHHHHHHHHHHHhC
Confidence            6889999999999999999888788999999999887765543    33332   12344432  2232   33333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++-++|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.44  E-value=0.0098  Score=60.98  Aligned_cols=94  Identities=15%  Similarity=0.112  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      +|.+||=.|++||  +++.-+|+ +|++|+++|.+++..+.++.    -|..  |||...    ..+.+.+.++.+|+|+
T Consensus        59 ~g~~vLDvGCGgG--~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~----~~edl~~~~~~FDvV~  129 (243)
T COG2227          59 PGLRVLDVGCGGG--ILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQA----TVEDLASAGGQFDVVT  129 (243)
T ss_pred             CCCeEEEecCCcc--HhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhh----hHHHHHhcCCCccEEE
Confidence            7889998899555  57777776 58999999999998888763    3443  678763    3455555556899985


Q ss_pred             -----eCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        186 -----PGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       186 -----D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                           +-+..+. .-+..|.+++||||.+++--
T Consensus       130 cmEVlEHv~dp~-~~~~~c~~lvkP~G~lf~ST  161 (243)
T COG2227         130 CMEVLEHVPDPE-SFLRACAKLVKPGGILFLST  161 (243)
T ss_pred             EhhHHHccCCHH-HHHHHHHHHcCCCcEEEEec
Confidence                 4555551 12688999999999988764

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.018  Score=57.65  Aligned_cols=77  Identities=26%  Similarity=0.252  Sum_probs=55.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccchhHHHHHHHhcC-CCeeEEEeCCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRELDRFANQILSYG-SELDADHPGFT  189 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG  189 (655)
                      ++++|+|++|+||..+++.....|++|+++++++++.+.++..++.. ..|..+.  +++.+.+.+.. .++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADP--ASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCH--HHHHHHHHHhcCCCCCEEEECCC
Confidence            47999999999999999877678999999999988877777666542 2344432  23333333332 26899998887


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            5

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.013  Score=59.67  Aligned_cols=81  Identities=20%  Similarity=0.142  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-YV--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .+.+|+|+||+|+||..+++.....|++|+.+++++++.+.+.    +.|.. ..  .|..+.. .+.+.+.+.+..+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988888999999998876655432    23432 11  2444321 112233333333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999988874

>PLN02253 xanthoxin dehydrogenase

Probab=96.43  E-value=0.016  Score=60.18  Aligned_cols=81  Identities=15%  Similarity=0.064  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC--c-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA--D-YV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA--d-~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|.+++|+||+|+||..+++.....|++|+++++++++.+.+ .+++.  . ..  .|..+.. .+++.+.+.+..+++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999998887777899999998877655443 23322  1 11  3444421 1122233333334799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.42  E-value=0.016  Score=59.81  Aligned_cols=81  Identities=19%  Similarity=0.201  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChH---HHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPV---GVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~---k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||++  |||.++++.....|++|+.++++++   +.+.+ .+.|...+  .|-.+.. .+.+.+.+.+..++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            688999999987  8999988777778999988877642   22222 23354332  3554431 12233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        87 iDilVnnag~   96 (260)
T PRK06603         87 FDFLLHGMAF   96 (260)
T ss_pred             ccEEEEcccc
Confidence            9999988764

>PRK05717 oxidoreductase; Validated

Probab=96.42  E-value=0.018  Score=58.83  Aligned_cols=79  Identities=22%  Similarity=0.117  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE---EEeCCccchhHH---HHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY---VVDHTIRELDRF---ANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~---vId~~~~~~~d~---~~~i~~~~~gvD  182 (655)
                      +|.+|+|+|++|+||..+++.....|++|+.+++++++.+.+ ++++...   ..|..+.  ++.   .+.+.+..+++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADE--AQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH--HHHHHHHHHHHHHhCCCC
Confidence            788999999999999988887777899999998877655443 4455321   2344432  123   233333234689


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.013  Score=59.90  Aligned_cols=79  Identities=18%  Similarity=0.173  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++++|+||+|+||..+++.....|++|+.+++++++.  .....+.. ..|..+.. ..++.+.+.+..+++|+++.+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   82 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNN   82 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            688999999999999999988888899999999876541  11112211 13444321 112233333333478999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        83 ag~   85 (252)
T PRK07856         83 AGG   85 (252)
T ss_pred             CCC
Confidence            874

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.40  E-value=0.022  Score=58.18  Aligned_cols=81  Identities=14%  Similarity=0.080  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+++|+||+|+||..+++.....|++|+.+++++++.+.+    +..|... .  .|..+.. ..++.+.+.+..+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            678999999999999999987777899999999987765443    2234322 1  2333321 112233333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=96.40  E-value=0.016  Score=65.89  Aligned_cols=82  Identities=18%  Similarity=0.076  Sum_probs=57.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY---VVDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      ..|++++|+|+++|||...++.....|++|+.++++.++.+.+ +++|...   .+|.++.. ...+.+.+.+..+++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            3688999999999999999998888899999999988876554 4566432   24544431 11233333333357999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.+.|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9998874

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.40  E-value=0.011  Score=58.15  Aligned_cols=89  Identities=18%  Similarity=0.156  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||..+++.++.+|++|++.+++.+........|...    .     ++.+.+.    ..|+|+-++.
T Consensus        35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~----~-----~l~ell~----~aDiv~~~~p  100 (178)
T PF02826_consen   35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY----V-----SLDELLA----QADIVSLHLP  100 (178)
T ss_dssp             TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE----S-----SHHHHHH----H-SEEEE-SS
T ss_pred             CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccccee----e-----ehhhhcc----hhhhhhhhhc
Confidence            7999999999 99999999999999999999999877665455665421    1     2233333    2577777665


Q ss_pred             cc--hHHH-HHHHHHHhccccceEEE
Q psy14589        190 DP--VYRA-RRKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~--~~~~-l~~~l~~l~~gGrlv~v  212 (655)
                      ..  +... -.+.++.+++|..+|-+
T Consensus       101 lt~~T~~li~~~~l~~mk~ga~lvN~  126 (178)
T PF02826_consen  101 LTPETRGLINAEFLAKMKPGAVLVNV  126 (178)
T ss_dssp             SSTTTTTSBSHHHHHTSTTTEEEEES
T ss_pred             cccccceeeeeeeeeccccceEEEec
Confidence            32  1000 25667788877765554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.016  Score=59.28  Aligned_cols=81  Identities=19%  Similarity=0.045  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hCCCcE---EEeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GLGADY---VVDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      ++.+++|+|++|+||..+++.....|++|+.++++++..+.+.   +.|...   ..|..+.. .+.+.+.+.+..+++|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999888788999999988765433332   234321   13444321 1122333333334789


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        85 ~vi~~ag~   92 (263)
T PRK08226         85 ILVNNAGV   92 (263)
T ss_pred             EEEECCCc
Confidence            99998874

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.019  Score=58.77  Aligned_cols=81  Identities=16%  Similarity=-0.002  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HH----HHHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VA----KAYGLGADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~----~a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+++|+|++||||..+++.....|++|+++++++++ .+    .+++.|... .  .|..+.. ..++.+.+.+..++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999888899999999876532 22    223344321 1  2443321 11223333333357


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999885

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.021  Score=58.53  Aligned_cols=79  Identities=14%  Similarity=0.053  Sum_probs=53.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccchhHHHHH---HHhcCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRELDRFANQ---ILSYGSE  180 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~~---i~~~~~g  180 (655)
                      +.+|+|+||+|++|..+++.+...|++|+++++++++.+.+    +..|....   .|..+.  +++.+.   +.+..++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA--EACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcCC
Confidence            45799999999999999998888899999999987665433    23444221   243332  223322   2222347


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+|+.++|..
T Consensus        79 id~vi~~ag~~   89 (263)
T PRK06181         79 IDILVNNAGIT   89 (263)
T ss_pred             CCEEEECCCcc
Confidence            89999998753

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.37  E-value=0.022  Score=58.30  Aligned_cols=81  Identities=15%  Similarity=0.044  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|.+++|+||+|+||...++.....|++|+++.++. ++.+.+++.+...+ .|..+.. ..++.+.+.+..+++|+++.
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999999999999999988777899998775543 34444444444322 3444431 11223333333347999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8875

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.019  Score=59.06  Aligned_cols=80  Identities=13%  Similarity=0.031  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C--CC-cEE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L--GA-DYV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L--GA-d~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      +|.+++|+||+|++|..+++.....|++|+++++++++.+.+.+ +  +. ...  .|..+.. ..++.+.+.+ .+++|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCC
Confidence            57889999999999999998888889999999998877655532 2  21 112  2333321 0122223333 24789


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            99999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.019  Score=57.91  Aligned_cols=75  Identities=15%  Similarity=0.046  Sum_probs=52.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +++|+||+|++|..+++.....|++|+.+++++++.+.+ +++++..+ .|..+.  +++.+.+.+..+.+|+++.+.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDP--ASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCH--HHHHHHHHHHhhcCcEEEECCC
Confidence            589999999999999988878899999999988877654 44555433 344432  2344434333336899998876

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.01  Score=61.15  Aligned_cols=77  Identities=18%  Similarity=0.237  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHH---HHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFAN---QILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~---~i~~~~~gvDvV~  185 (655)
                      .+.+|+|+||+|+||..+++.....|++|+++++++++.+..  .+...+ .|..+.  +++.+   .+.+..+.+|+++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~--~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDD--ASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCH--HHHHHHHHHHHHhCCCCCEEE
Confidence            467899999999999999888778899999999886654322  233222 354443  23333   3333344799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .+.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99985

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.019  Score=58.60  Aligned_cols=79  Identities=15%  Similarity=-0.005  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hCCCcE---EEeCCccchhHHHH---HHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GLGADY---VVDHTIRELDRFAN---QILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~LGAd~---vId~~~~~~~d~~~---~i~~~~~g  180 (655)
                      +|.+++|+||+|++|..+++.....|++|+++++++++.+...   +.|...   ..|.++.  +++.+   .+.+..++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD--AQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH--HHHHHHHHHHHHhcCC
Confidence            6889999999999999988877778999999988887653333   334321   1344332  22332   23222347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999984

>PRK08643 acetoin reductase; Validated

Probab=96.35  E-value=0.013  Score=59.74  Aligned_cols=80  Identities=16%  Similarity=0.082  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      |++++|+|++|+||..+++.....|++|+++++++++.+.+.    +.|....   .|.++.. ..+..+.+.+..+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999888888999999998876654432    2343221   2444321 0122333333335799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.+.|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99998875

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.35  E-value=0.023  Score=57.72  Aligned_cols=81  Identities=17%  Similarity=0.046  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY---VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+|+|+|++|++|...++.....|++|+++++++++.+.+.    +.+...   ..|..+.. .....+.+.+..+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999877778999999999887665432    234321   13444321 011223333333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.019  Score=59.58  Aligned_cols=81  Identities=22%  Similarity=0.129  Sum_probs=54.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-YV--VDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      +.+|+|+||+|+||..+++.....|++|+++++++++.+.+.+ ++.. .+  .|.++.. ..+..+.+.+..+++|+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5689999999999999988877789999999998877765543 3321 11  3443321 1122233333334789999


Q ss_pred             eCCCcc
Q psy14589        186 PGFTDP  191 (655)
Q Consensus       186 D~vG~~  191 (655)
                      .++|..
T Consensus        83 ~~ag~~   88 (275)
T PRK08263         83 NNAGYG   88 (275)
T ss_pred             ECCCCc
Confidence            998853

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.022  Score=57.80  Aligned_cols=78  Identities=17%  Similarity=0.072  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----C--CCc-EE--EeCCccchhHHHH---HHHhcC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----L--GAD-YV--VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----L--GAd-~v--Id~~~~~~~d~~~---~i~~~~  178 (655)
                      +.+++|+||+|++|...++.....|++|+++++++++.+.+.+    .  |+. ++  .|.++.  +++.+   .+.+..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH--DQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH--HHHHHHHHHHHHHc
Confidence            5689999999999998887666779999999998877655422    1  221 11  354443  23333   333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.+.|.
T Consensus        80 ~~id~vi~~ag~   91 (248)
T PRK08251         80 GGLDRVIVNAGI   91 (248)
T ss_pred             CCCCEEEECCCc
Confidence            479999998873

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.015  Score=58.87  Aligned_cols=81  Identities=15%  Similarity=0.108  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh---CCCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG---LGAD-YV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~---LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      +|.+++|+||+|+||..+++.....|++|+++++++++.+...+   .|.. .+  .|..+.. ..+..+.+.+..+++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999988776789999999988766544322   2322 22  2433321 0122233333334799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.026  Score=57.03  Aligned_cols=80  Identities=15%  Similarity=0.045  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccchhHHH---HHHHhcC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRELDRFA---NQILSYG  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~---~~i~~~~  178 (655)
                      ..+.+++|+|++|++|..++..+...|++|+++++++++.+.+.    +.+... +  .|.++.  +++.   +.+.+..
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   81 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP--EAIAPGIAELLEQF   81 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH--HHHHHHHHHHHHHc
Confidence            45678999999999999999888888999999999887655442    233221 1  343332  2332   2333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            479999999985

>KOG0725|consensus

Probab=96.32  E-value=0.022  Score=59.93  Aligned_cols=82  Identities=15%  Similarity=0.128  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc------EEEeCCccc-hhHHHHHHHhc-
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD------YVVDHTIRE-LDRFANQILSY-  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd------~vId~~~~~-~~d~~~~i~~~-  177 (655)
                      .|..++|+|++.|||.+++......|++|+.+++++++.+...    ..|.+      .+.|.++.+ .+++.+...+. 
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~   86 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF   86 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999888888888999999999988765543    33332      233444321 12333333333 


Q ss_pred             CCCeeEEEeCCCcc
Q psy14589        178 GSELDADHPGFTDP  191 (655)
Q Consensus       178 ~~gvDvV~D~vG~~  191 (655)
                      .+++|+.++..|..
T Consensus        87 ~GkidiLvnnag~~  100 (270)
T KOG0725|consen   87 FGKIDILVNNAGAL  100 (270)
T ss_pred             CCCCCEEEEcCCcC
Confidence            45799999888765

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.31  E-value=0.064  Score=54.32  Aligned_cols=81  Identities=16%  Similarity=0.068  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHH----HHHHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGV----AKAYGLGADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~----~~a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .+.+|+|+||+|+||...++-....|++|+.+.++ .++.    +.+++.|... .  .|.++.. .....+.+.+..++
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999998888777889998776643 2222    2234444432 2  3444321 11223333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        85 ~d~vi~~ag~   94 (252)
T PRK06077         85 ADILVNNAGL   94 (252)
T ss_pred             CCEEEECCCC
Confidence            8999999984

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.31  E-value=0.021  Score=58.46  Aligned_cols=82  Identities=11%  Similarity=0.057  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGLGADY-V--VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      .|.+++|+|++|+||..+++.....|++|+++++++.  ..+.++++|... .  .|-.+.. .+.+.+.+.+..+++|+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6889999999999999999988888999988766432  223344555321 1  2333321 12233344443457999


Q ss_pred             EEeCCCcc
Q psy14589        184 DHPGFTDP  191 (655)
Q Consensus       184 V~D~vG~~  191 (655)
                      ++.++|..
T Consensus        89 li~~Ag~~   96 (253)
T PRK08993         89 LVNNAGLI   96 (253)
T ss_pred             EEECCCCC
Confidence            99998753

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.022  Score=58.93  Aligned_cols=79  Identities=20%  Similarity=0.123  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h---CC--Cc-EEE--eCCccchhHHHH---HHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G---LG--AD-YVV--DHTIRELDRFAN---QILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~---LG--Ad-~vI--d~~~~~~~d~~~---~i~~~  177 (655)
                      ++.+++|+|++|+||..+++.....|++|+++++++++.+... +   .+  .. .++  |..+.  +++.+   .+.+.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE--DQVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH--HHHHHHHHHHHHH
Confidence            5789999999999999999988889999999998876654332 2   21  11 222  43332  22322   23332


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus        84 ~~~~d~li~~ag~   96 (276)
T PRK05875         84 HGRLHGVVHCAGG   96 (276)
T ss_pred             cCCCCEEEECCCc
Confidence            3478999998873

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.021  Score=59.15  Aligned_cols=77  Identities=22%  Similarity=0.181  Sum_probs=53.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-E--EEeCCccchhHHHHHH---HhcCCCeeEE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-Y--VVDHTIRELDRFANQI---LSYGSELDAD  184 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~--vId~~~~~~~d~~~~i---~~~~~gvDvV  184 (655)
                      .+|+|+||+|+||..+++-....|++|+++++++++.+.+++ .+.. .  ..|.++.  +++.+.+   .+..+++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDS--AAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEE
Confidence            579999999999999988777789999999998877766654 2321 1  1344432  1233322   2223478999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            999875

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.28  E-value=0.018  Score=58.55  Aligned_cols=82  Identities=17%  Similarity=0.090  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE--E--EeCCccch---hHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY--V--VDHTIREL---DRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~--v--Id~~~~~~---~d~~~~i~~~  177 (655)
                      .+|.+|+|+|++|++|...++.....|++|++++++.++.+.+    ++.+...  +  .|......   .++.+.+.+.
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            4788999999999999999987777899999999987665443    3344322  1  23321111   1233334443


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++-+.|.
T Consensus        90 ~~~id~vi~~Ag~  102 (247)
T PRK08945         90 FGRLDGVLHNAGL  102 (247)
T ss_pred             hCCCCEEEECCcc
Confidence            3478999988764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.28  E-value=0.02  Score=58.72  Aligned_cols=78  Identities=18%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV--VDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      +|+|+|++||+|..+++.....|++|+.+++++++.+.+.    +.|....  .|.++.. .+++.+.+.+..+++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6999999999999988877778999999999887665442    2332222  3443321 1122333333334799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .+.|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            98874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.27  E-value=0.021  Score=58.40  Aligned_cols=81  Identities=20%  Similarity=0.157  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .+.+++|+|++|++|..+++.....|++|+.++++.++.+.+. +++.. ..  .|-.+.. ...+.+.+.+..+++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5779999999999999999888888999999999887766553 34321 11  2333321 112222333333478999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.+.|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            988874

>PRK06484 short chain dehydrogenase; Validated

Probab=96.25  E-value=0.021  Score=64.81  Aligned_cols=81  Identities=23%  Similarity=0.135  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcE---EEeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADY---VVDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||...++.....|++|+++++++++.+.+.+ +|...   ..|..+.. ...+.+.+.+..+.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999988877889999999998887766643 55432   23544431 112333333333579999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus       348 i~nAg~  353 (520)
T PRK06484        348 VNNAGI  353 (520)
T ss_pred             EECCCC
Confidence            998874

>PRK12743 oxidoreductase; Provisional

Probab=96.25  E-value=0.027  Score=57.74  Aligned_cols=80  Identities=10%  Similarity=0.063  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHH----HHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAK----AYGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~----a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +++|+|+||+|+||..+++.....|++|+.+.+ +.++.+.    ++..|... +  .|..+.. .+.+.+.+.+..+++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            568999999999999999988889999987754 3333322    23455432 2  3444321 112333444434478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999998874

>KOG1014|consensus

Probab=96.23  E-value=0.028  Score=59.66  Aligned_cols=80  Identities=14%  Similarity=0.089  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCCchHH-HHHHHHHHcCCeEEEEecChHHHHHHH-----hCCC---cEEEeCCccchhHHHHHHHhc-C
Q psy14589        109 PEPDTLFIIGANRGNGL-AAIQVGKAYGLTVFASVGCPVGVAKAY-----GLGA---DYVVDHTIRELDRFANQILSY-G  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~-~avQlAk~~Ga~Viat~~s~~k~~~a~-----~LGA---d~vId~~~~~~~d~~~~i~~~-~  178 (655)
                      +.|+|.+|+||+.|||. .|-++|| +|.+|+.+.|+++|++.++     +.++   ..++|.++.+  ..-+.+++. .
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~--~~ye~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGD--EVYEKLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCc--hhHHHHHHHhc
Confidence            46799999999999996 5667888 8999999999999998763     2342   3347877752  223344443 3


Q ss_pred             C-CeeEEEeCCCcc
Q psy14589        179 S-ELDADHPGFTDP  191 (655)
Q Consensus       179 ~-gvDvV~D~vG~~  191 (655)
                      + .+-+.++++|-.
T Consensus       124 ~~~VgILVNNvG~~  137 (312)
T KOG1014|consen  124 GLDVGILVNNVGMS  137 (312)
T ss_pred             CCceEEEEeccccc
Confidence            3 677789999876

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.22  E-value=0.018  Score=58.28  Aligned_cols=81  Identities=16%  Similarity=0.132  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHH----HHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGV----AKAYGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~----~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|.+++|+|++|+||..+++.....|++|+++.+ ++.+.    +.+++.|+...   .|..+.. ..++.+.+.+..++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999888888999877543 22222    22334565433   3444321 11223333333457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.21  E-value=0.03  Score=57.36  Aligned_cols=80  Identities=15%  Similarity=0.108  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+|+|+||+|+||...++.....|++|++++++ ++.+.+    .+.|...   .+|..+.. .+.+.+.+.+..+++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68899999999999999998888889999988876 333222    2344321   13444321 112333333334578


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        93 d~li~~ag~  101 (258)
T PRK06935         93 DILVNNAGT  101 (258)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.027  Score=57.05  Aligned_cols=77  Identities=18%  Similarity=0.067  Sum_probs=51.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE----EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV----VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v----Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++|+|+||+|++|...++.....|++|+++++++++.+.+.    ..+...+    .|..+.  +++.+.+.+....+|+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDT--ASHAAFLDSLPALPDI   79 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh--HHHHHHHHHHhhcCCE
Confidence            57999999999999999888788999999999887665432    1222222    233332  2333434433335799


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        80 vv~~ag~   86 (243)
T PRK07102         80 VLIAVGT   86 (243)
T ss_pred             EEECCcC
Confidence            9987764

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.20  E-value=0.016  Score=59.32  Aligned_cols=78  Identities=17%  Similarity=0.158  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +|++|+|+||+|+||..+++.....|++|+++++++.+.   ..-.... ..|..+.. .+.+.+.+.+..+++|+++.+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   84 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHV   84 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            688999999999999999988778899999998875432   1111111 13444321 112233344434579999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        85 ag~   87 (260)
T PRK06523         85 LGG   87 (260)
T ss_pred             Ccc
Confidence            873

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.028  Score=59.87  Aligned_cols=80  Identities=21%  Similarity=0.243  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----------HHHHH----HHhCCCcEE---EeCCccc-hhHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----------VGVAK----AYGLGADYV---VDHTIRE-LDRFA  171 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----------~k~~~----a~~LGAd~v---Id~~~~~-~~d~~  171 (655)
                      .|.+++|+||++|||..+++.....|++|++++++.          ++.+.    +.+.|....   .|..+.. .+.+.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            688999999999999999988888899999988763          23222    233443221   3443321 12233


Q ss_pred             HHHHhcCCCeeEEEeCC-C
Q psy14589        172 NQILSYGSELDADHPGF-T  189 (655)
Q Consensus       172 ~~i~~~~~gvDvV~D~v-G  189 (655)
                      +.+.+..+++|+++.++ |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence            34433334799999887 5

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.19  E-value=0.024  Score=57.71  Aligned_cols=77  Identities=16%  Similarity=0.087  Sum_probs=53.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEE---EeCCccchhHHHH---HHHhcCCCeeEE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYV---VDHTIRELDRFAN---QILSYGSELDAD  184 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~v---Id~~~~~~~d~~~---~i~~~~~gvDvV  184 (655)
                      .+|+|+||+|++|...++.+...|++|+++++++++.+.+.+ +|....   .|-.+.  +++.+   .+.+..+++|++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNR--AAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEE
Confidence            368999999999999998888889999999999887766543 444321   244332  22333   333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            988874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.18  E-value=0.086  Score=52.22  Aligned_cols=77  Identities=19%  Similarity=0.056  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C----CCcEE-EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L----GADYV-VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L----GAd~v-Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++.+++|.|++|++|..+++.+...|++|+.+.++.++.+.+.+ +    +.... .+..+.  +++.+.+.    ++|+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~--~~~~~~~~----~~di  100 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDD--AARAAAIK----GADV  100 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCH--HHHHHHHh----cCCE
Confidence            78899999999999998888777789999999998877665432 2    33221 222221  23333332    6899


Q ss_pred             EEeCCCcch
Q psy14589        184 DHPGFTDPV  192 (655)
Q Consensus       184 V~D~vG~~~  192 (655)
                      |+.+++...
T Consensus       101 Vi~at~~g~  109 (194)
T cd01078         101 VFAAGAAGV  109 (194)
T ss_pred             EEECCCCCc
Confidence            999876554

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.18  E-value=0.029  Score=57.19  Aligned_cols=81  Identities=16%  Similarity=0.123  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+++|+||+|+||..+++.....|++|+.+++++++.+.+    ++.|.. ..  .|..+.. ..++.+.+.+..+++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            789999999999999999987777899999999987765443    234422 12  2444321 112223333333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999998875

>PRK06398 aldose dehydrogenase; Validated

Probab=96.16  E-value=0.007  Score=62.31  Aligned_cols=76  Identities=17%  Similarity=0.111  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EEEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++++|+|++||||..+++.....|++|+++++++++..     ... ...|..+.. .+++.+.+.+..+++|+++.+
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6789999999999999999888889999999988754321     111 113444431 112333343333479999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      .|.
T Consensus        80 Ag~   82 (258)
T PRK06398         80 AGI   82 (258)
T ss_pred             CCC
Confidence            874

>PRK06720 hypothetical protein; Provisional

Probab=96.15  E-value=0.042  Score=53.66  Aligned_cols=82  Identities=15%  Similarity=0.040  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+++|+||+||+|...+......|++|+.++++++..+.+    ++.|... +  .|.++.. ...+.+.+.+..+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999998887777899999999887654332    2335332 2  2333221 012233333333478


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+++.++|..
T Consensus        95 DilVnnAG~~  104 (169)
T PRK06720         95 DMLFQNAGLY  104 (169)
T ss_pred             CEEEECCCcC
Confidence            9999988753

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.15  E-value=0.026  Score=58.21  Aligned_cols=81  Identities=12%  Similarity=0.014  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChHHH---HHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPVGV---AKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~k~---~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+||+  +|||..+++.....|++|+.++++++..   +.+ ++++...+  .|-++.. .+.+.+.+.+..++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            68999999998  4999999887777899999988875432   222 34443333  2433321 12233344433357


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        89 ld~lv~nAg~   98 (258)
T PRK07533         89 LDFLLHSIAF   98 (258)
T ss_pred             CCEEEEcCcc
Confidence            8999988874

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.14  E-value=0.034  Score=57.25  Aligned_cols=81  Identities=21%  Similarity=0.104  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|.+++|+|++|+||..++......|++|+.+++++++.+.+    ++.|....   .|-++.. ..++.+.+.+..+++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            678999999999999988877677899999999888765443    23454321   3444321 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.14  E-value=0.027  Score=58.38  Aligned_cols=81  Identities=19%  Similarity=0.038  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+++|+||+|++|..+++.....|++|+++++++++.+.+    ++.|... .  .|..+.. ...+.+.+.+..+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999988888899999999887655443    2334321 1  2333321 112223333333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        89 d~li~~ag~   97 (278)
T PRK08277         89 DILINGAGG   97 (278)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.027  Score=59.51  Aligned_cols=81  Identities=21%  Similarity=0.107  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----Hh-C-CCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YG-L-GAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~-L-GAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|.+|+|+||+||||..+++.....|++|+++++++++.+.+    .+ . +.. .+  +|..+.. ...+.+.+.+..+
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            688999999999999999887777899999999887765433    11 1 221 11  3444321 1122233333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        95 ~iD~li~nAg~  105 (306)
T PRK06197         95 RIDLLINNAGV  105 (306)
T ss_pred             CCCEEEECCcc
Confidence            79999998874

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.038  Score=57.22  Aligned_cols=79  Identities=20%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EE--EeCCccchhHHHH--HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YV--VDHTIRELDRFAN--QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~v--Id~~~~~~~d~~~--~i~~~~  178 (655)
                      .+.+++|+||+|++|...++.....|++|+++++++++.+.+.    ..+.+   .+  .|.++.  +++.+  .+.+..
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ--NSIHNFQLVLKEI   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH--HHHHHHHHHHHhc
Confidence            4678999999999999999887788999999998877655442    22321   12  344443  23332  222223


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            478999999875

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.09  E-value=0.033  Score=61.36  Aligned_cols=91  Identities=16%  Similarity=0.039  Sum_probs=64.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCC---C-cEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLG---A-DYVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LG---A-d~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+|+|.|+ |+||+.+++.+.+.| .+|++.+++.++++.+...+   . ...+|-.+.  +.+.+.++    +.|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~--~al~~li~----~~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV--DALVALIK----DFDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh--HHHHHHHh----cCCEEEE
Confidence            46999999 999999999988888 69999999999998887654   1 223454432  13334443    4699999


Q ss_pred             CCCcchHHHHHHHHHHhccccceEEE
Q psy14589        187 GFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+...   -...++++...|.-++-
T Consensus        75 ~~p~~~---~~~i~ka~i~~gv~yvD   97 (389)
T COG1748          75 AAPPFV---DLTILKACIKTGVDYVD   97 (389)
T ss_pred             eCCchh---hHHHHHHHHHhCCCEEE
Confidence            998874   34666555555655554

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.036  Score=58.16  Aligned_cols=81  Identities=16%  Similarity=0.052  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh---------HHHHHH----HhCCCcEE---EeCCccc-hhHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP---------VGVAKA----YGLGADYV---VDHTIRE-LDRFAN  172 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~---------~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~  172 (655)
                      +|.+++|+||++|||...++.....|++|++++++.         ++.+.+    ++.|....   .|..+.. ..++.+
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            688999999999999999887777899998887654         333222    23343322   2444321 112333


Q ss_pred             HHHhcCCCeeEEEeCCCc
Q psy14589        173 QILSYGSELDADHPGFTD  190 (655)
Q Consensus       173 ~i~~~~~gvDvV~D~vG~  190 (655)
                      .+.+..+++|+++.+.|.
T Consensus        85 ~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHhcCCCCEEEECCCC
Confidence            333333579999998875

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.06  E-value=0.038  Score=52.33  Aligned_cols=80  Identities=20%  Similarity=0.177  Sum_probs=50.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC--hHHHHHH----HhCCCcEE-E--eCCccc-hhHHHHHHHhcCCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGC--PVGVAKA----YGLGADYV-V--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s--~~k~~~a----~~LGAd~v-I--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      ++|+|+||+||||...++.....|+ +|+.+.++  .++.+.+    +..|.... +  |..+.. ...+.+.+.+..+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4799999999999988876666677 77888877  3443333    44563222 2  323221 12334444433458


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.+.|..
T Consensus        81 ld~li~~ag~~   91 (167)
T PF00106_consen   81 LDILINNAGIF   91 (167)
T ss_dssp             ESEEEEECSCT
T ss_pred             ccccccccccc
Confidence            99999988764

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.06  E-value=0.025  Score=57.17  Aligned_cols=88  Identities=17%  Similarity=0.197  Sum_probs=60.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      |+|.||+|.+|...++.+...|.+|.+.+|++.+  .+.++..|+..|. |+.+.  +.+.+.+    .|+|.|+-+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~--~~l~~al----~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDP--ESLVAAL----KGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-H--HHHHHHH----TTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCH--HHHHHHH----cCCceEEeecCc
Confidence            7899999999999999888888899999998643  4556789997552 23221  2333333    389999998883


Q ss_pred             ---chHHHHHHHHHHhcccc
Q psy14589        191 ---PVYRARRKYFADLAFNY  207 (655)
Q Consensus       191 ---~~~~~l~~~l~~l~~gG  207 (655)
                         ...+.....+++.+.-|
T Consensus        75 ~~~~~~~~~~~li~Aa~~ag   94 (233)
T PF05368_consen   75 SHPSELEQQKNLIDAAKAAG   94 (233)
T ss_dssp             SCCCHHHHHHHHHHHHHHHT
T ss_pred             chhhhhhhhhhHHHhhhccc
Confidence               33223455566666666

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.05  E-value=0.079  Score=53.21  Aligned_cols=95  Identities=15%  Similarity=-0.005  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccch-----------hH-H-HHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIREL-----------DR-F-ANQIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~-----------~d-~-~~~i~  175 (655)
                      .|.+|+|.|. |.+|..+++.+...|++|+++++++++.+.+.+ +|+.. ++..+...           .+ + .+.+.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~l~~~~~Dv~vp~A~~~~I~~~~~~  104 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPEEIYSVDADVFAPCALGGVINDDTIP  104 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-EcchhhccccCCEEEecccccccCHHHHH
Confidence            7899999999 899999999999999999999998887766643 46432 22211000           00 0 01111


Q ss_pred             hcCCCeeEEEeCCCcchHHHH-HHHHHHhccccceEE
Q psy14589        176 SYGSELDADHPGFTDPVYRAR-RKYFADLAFNYKHFF  211 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~~~~~l-~~~l~~l~~gGrlv~  211 (655)
                      +.  +.++|++..-++.   . .+.-+.|+..|.+++
T Consensus       105 ~l--~~~~v~~~AN~~~---~~~~~~~~L~~~Gi~~~  136 (200)
T cd01075         105 QL--KAKAIAGAANNQL---ADPRHGQMLHERGILYA  136 (200)
T ss_pred             Hc--CCCEEEECCcCcc---CCHhHHHHHHHCCCEEe
Confidence            11  4567777666654   3 466666777776554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd04884 ACT_CBS C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria

Probab=96.04  E-value=0.031  Score=46.28  Aligned_cols=63  Identities=13%  Similarity=0.241  Sum_probs=45.4

Q ss_pred             EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEec--CCchHHHHHHHHHcc
Q psy14589        264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECA--PGGDLSSVIESLRSS  327 (655)
Q Consensus       264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~e--g~~~v~~~l~~L~~~  327 (655)
                      +.+.+++ +||+|+++++.+++.|+|+..+...+.....+....+|.++  ....++++++.|++.
T Consensus         2 l~v~~~d-~pG~L~~l~~~i~~~g~nI~~i~~~~~~~~~~~~~~~v~v~~e~~~~~~~i~~~L~~~   66 (72)
T cd04884           2 FTFLLED-KPGTLKPVVDTLREFNARIISILTAFEDAPDGMRRVFIRVTPMDRSKENELIEELKAK   66 (72)
T ss_pred             EEEEecC-CCccHHHHHHHHHHCCCeEEEEEeccccCCCCccEEEEEEEEecchHHHHHHHHHhCc
Confidence            3456777 99999999999999999999887766543344344455444  343477888888766

This CD includes the C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria. This protein has two N-terminal tandem CBS domains and a single C-terminal ACT domain. The CBS domain is found in a wide range of proteins, often in tandem arrangements and together with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.035  Score=57.72  Aligned_cols=81  Identities=19%  Similarity=0.177  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-------HH----HHHhCCCcEE---EeCCccc-hhHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-------VA----KAYGLGADYV---VDHTIRE-LDRFANQI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-------~~----~a~~LGAd~v---Id~~~~~-~~d~~~~i  174 (655)
                      .|.+++|+||+|++|..+++.....|++|++++++.++       ++    .+++.|....   .|..+.. ...+.+.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999998877889999999886532       11    1233444321   3444431 01222233


Q ss_pred             HhcCCCeeEEEeCCCc
Q psy14589        175 LSYGSELDADHPGFTD  190 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~  190 (655)
                      .+..+++|+++.++|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            3333478999998875

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.03  E-value=0.03  Score=56.64  Aligned_cols=79  Identities=18%  Similarity=0.032  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHHH---HhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQI---LSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~i---~~~~~  179 (655)
                      +|.+++|+||+|+||..+++.....|++|++++++.++.+.+    ++.+... +  .|..+.  +++.+.+   .+..+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR--DSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH--HHHHHHHHHHHHHcC
Confidence            578999999999999999988888899999999888765544    2233222 2  233332  2233323   22234


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus        80 ~~d~vi~~ag~   90 (250)
T TIGR03206        80 PVDVLVNNAGW   90 (250)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.02  E-value=0.062  Score=53.30  Aligned_cols=100  Identities=16%  Similarity=0.053  Sum_probs=61.0

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .+ ++|++|+=.|+  |.|..++.+++.. +.+|++++.+++..+.++    ++|.+.+--...    +..+.+......
T Consensus        37 ~~-~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~~~~  109 (196)
T PRK07402         37 RL-EPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQLAPA  109 (196)
T ss_pred             CC-CCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhCCCC
Confidence            45 68889887775  5565667777664 579999999998777664    356543211111    222222222222


Q ss_pred             ee-EEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        181 LD-ADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vD-vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .| ++++. +....+.++.+.+.|++||++++..
T Consensus       110 ~d~v~~~~-~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        110 PDRVCIEG-GRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             CCEEEEEC-CcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            34 44543 3332244788899999999988864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.01  E-value=0.023  Score=57.59  Aligned_cols=78  Identities=24%  Similarity=0.138  Sum_probs=52.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcE-E--EeCCccchhHHHH---HHHhcCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADY-V--VDHTIRELDRFAN---QILSYGSE  180 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~-v--Id~~~~~~~d~~~---~i~~~~~g  180 (655)
                      |.+|||+|++|++|..++......|++|+++++++++.+.+.+    .+... +  .|..+.  +++.+   .+.+..++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE--DEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH--HHHHHHHHHHHHhcCC
Confidence            4579999999999999998777789999999998876655532    23321 1  244432  22322   33333346


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+|+-+.|.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999887764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.99  E-value=0.033  Score=56.07  Aligned_cols=81  Identities=14%  Similarity=0.044  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      ++.+++|+||+|+||..+++.....|++|+.++++.++.+.+. .++... +  .|..+.. .+++.+.+.+..+++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5779999999999999988877778999988888777765543 344321 1  2333321 112223333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999884

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.98  E-value=0.031  Score=57.72  Aligned_cols=82  Identities=11%  Similarity=0.080  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+++|+||  ++|||...++.....|++|+.+.+++...+.+    +++|....  .|-.+.. .+++.+.+.+..++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            6789999996  67999998887777899998876553222222    23343222  3444321 12233344443457


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|-.
T Consensus        85 iD~lVnnAG~~   95 (261)
T PRK08690         85 LDGLVHSIGFA   95 (261)
T ss_pred             CcEEEECCccC
Confidence            99999998753

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.048  Score=56.63  Aligned_cols=80  Identities=20%  Similarity=0.148  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccchhHHHHHH---HhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRELDRFANQI---LSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~~i---~~~~~  179 (655)
                      .+.+|+|+||+|+||..+++.....|++|++++++.++.+.+    +..|....   .|..+.  +++.+.+   .+..+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~   86 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP--DSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHhcC
Confidence            556899999999999999987777899999988877655433    23454322   244432  2333322   22234


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        87 ~id~vi~~Ag~~   98 (274)
T PRK07775         87 EIEVLVSGAGDT   98 (274)
T ss_pred             CCCEEEECCCcC
Confidence            789999988753

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.97  E-value=0.03  Score=57.25  Aligned_cols=78  Identities=13%  Similarity=-0.025  Sum_probs=51.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h----CCCcEE----EeCCccchhHHH---HHHHhcC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G----LGADYV----VDHTIRELDRFA---NQILSYG  178 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~----LGAd~v----Id~~~~~~~d~~---~~i~~~~  178 (655)
                      +++|+|+|++|+||..+++.....|++|+.++++.++.+.+. +    .|...+    .|.++.  ++..   +.+.+..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE--QSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH--HHHHHHHHHHHHHc
Confidence            568999999999999999888888999999998876554432 1    232122    243332  2232   2333223


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            478999998874

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=95.94  E-value=0.027  Score=59.38  Aligned_cols=109  Identities=20%  Similarity=0.152  Sum_probs=74.0

Q ss_pred             HHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHH
Q psy14589         95 STQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRF  170 (655)
Q Consensus        95 ~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~  170 (655)
                      ...+..+.+..++ ++|++||=.|+  |=|.+++-+|+..|++|++++-|++..+.++    +.|-..-+...-.   |+
T Consensus        58 ~~k~~~~~~kl~L-~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~---d~  131 (283)
T COG2230          58 RAKLDLILEKLGL-KPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ---DY  131 (283)
T ss_pred             HHHHHHHHHhcCC-CCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---cc
Confidence            3344455567788 99999999898  6688999999999999999999998776664    4565411111000   11


Q ss_pred             HHHHHhcCCCeeEE-----EeCCCcchH-HHHHHHHHHhccccceEEEe
Q psy14589        171 ANQILSYGSELDAD-----HPGFTDPVY-RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       171 ~~~i~~~~~gvDvV-----~D~vG~~~~-~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .    ...+.+|-|     ++.+|.+.+ +-+..+-+.|++||++++..
T Consensus       132 r----d~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~  176 (283)
T COG2230         132 R----DFEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHS  176 (283)
T ss_pred             c----ccccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEE
Confidence            1    111135554     567787522 22678888999999999876

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.94  E-value=0.04  Score=60.85  Aligned_cols=80  Identities=23%  Similarity=0.238  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH-------HHHh-CCCcEE-EeCCccchhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA-------KAYG-LGADYV-VDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~-------~a~~-LGAd~v-Id~~~~~~~d~~~~i~~~~~  179 (655)
                      ..|.+|+|+||+|.||..+++.+...|.+|++++++..+.+       .... .++..+ .|..+.  +++.+.+...+.
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~--~~l~~~~~~~~~  135 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA--DSLRKVLFSEGD  135 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH--HHHHHHHHHhCC
Confidence            57889999999999999999888888999999998765421       1111 233333 344442  244444443322


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+|+.|+|.
T Consensus       136 ~~D~Vi~~aa~  146 (390)
T PLN02657        136 PVDVVVSCLAS  146 (390)
T ss_pred             CCcEEEECCcc
Confidence            69999998874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.92  E-value=0.036  Score=63.12  Aligned_cols=89  Identities=13%  Similarity=0.018  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .+|++|+|.|. |..|++++++++..|++|++++..+.+.+.+++.|+.. +....     ..+.+.    .+|+|+.+.
T Consensus        10 ~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l~----~~D~VV~Sp   78 (488)
T PRK03369         10 LPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQIA----DYALVVTSP   78 (488)
T ss_pred             cCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHhh----cCCEEEECC
Confidence            47899999999 99999999999999999999998777666677888844 33221     112222    479999999


Q ss_pred             CcchHHHHHHHHHHhccccceEE
Q psy14589        189 TDPVYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       189 G~~~~~~l~~~l~~l~~gGrlv~  211 (655)
                      |-+.   -...++..+..|.=|.
T Consensus        79 Gi~~---~~p~~~~a~~~gi~v~   98 (488)
T PRK03369         79 GFRP---TAPVLAAAAAAGVPIW   98 (488)
T ss_pred             CCCC---CCHHHHHHHHCCCcEe
Confidence            9874   3344555556664333

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.90  E-value=0.04  Score=54.84  Aligned_cols=96  Identities=16%  Similarity=0.114  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++|++|+-.|+  |.|..++.+++.. +++|++++.+++..+.++    +.|.+.+ .....   +..+ +.. .+.+|+
T Consensus        44 ~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~---d~~~-~~~-~~~fDl  115 (187)
T PRK00107         44 PGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHG---RAEE-FGQ-EEKFDV  115 (187)
T ss_pred             CCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEec---cHhh-CCC-CCCccE
Confidence            56899999897  4556666677654 679999999987766553    4666542 22221   2222 212 337999


Q ss_pred             EEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        184 DHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       184 V~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |+-.........++.+.+.|++||+++.+
T Consensus       116 V~~~~~~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        116 VTSRAVASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             EEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence            98644333223478889999999998876

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.89  E-value=0.058  Score=54.40  Aligned_cols=80  Identities=16%  Similarity=0.081  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHHHH---hcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQIL---SYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~i~---~~~~  179 (655)
                      .+.+++|+|++|++|..++......|++|+++++++++.+.+    ...|... +  .|..+.  +++.+.+.   +..+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~   83 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY--EEVTAAIEQLKNELG   83 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH--HHHHHHHHHHHHHcC
Confidence            467899999999999999887778899999999987665443    2334322 1  233332  23333333   2234


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        84 ~id~vi~~ag~~   95 (239)
T PRK07666         84 SIDILINNAGIS   95 (239)
T ss_pred             CccEEEEcCccc
Confidence            799999988753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.89  E-value=0.052  Score=54.98  Aligned_cols=79  Identities=15%  Similarity=0.099  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEE-EecChHHHHHH----HhCCCcEE---EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFA-SVGCPVGVAKA----YGLGADYV---VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Via-t~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~---~i~~~~  178 (655)
                      +|.+++|+||+|++|..+++.....|++|++ .+++.++.+.+    ++.|....   .|..+.  +++.+   .+.+..
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV--EKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH--HHHHHHHHHHHHHc
Confidence            5789999999999999999888888999876 45666554332    33454322   233332  23333   333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (250)
T PRK08063         81 GRLDVFVNNAAS   92 (250)
T ss_pred             CCCCEEEECCCC
Confidence            478999998874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.89  E-value=0.045  Score=55.24  Aligned_cols=79  Identities=23%  Similarity=0.126  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHHHH---hcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQIL---SYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~i~---~~~~  179 (655)
                      .+.+|+|+||+|++|..+++.....|++|+++++++++...+    ++.+... +  .|..+.  +++.+.+.   +..+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR--AALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHhC
Confidence            578999999999999999887777899999999986654332    3334322 1  233332  23333222   2223


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      .+|+|+.+.|.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999988865

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.86  E-value=0.038  Score=61.50  Aligned_cols=75  Identities=13%  Similarity=0.013  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC--CcE-EEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG--ADY-VVDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG--Ad~-vId~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      +|++|+|+||+||+|..+++.....|++|+++++++++.+... +.+  ... ..|.++.      +.+.+.-+++|+++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~------~~v~~~l~~IDiLI  250 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE------AALAELLEKVDILI  250 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH------HHHHHHhCCCCEEE
Confidence            6889999999999999998877778999999988876654322 221  111 1344332      12222223789999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .+.|.
T Consensus       251 nnAGi  255 (406)
T PRK07424        251 INHGI  255 (406)
T ss_pred             ECCCc
Confidence            88774

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.86  E-value=0.038  Score=58.89  Aligned_cols=80  Identities=28%  Similarity=0.275  Sum_probs=53.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHH-HhCCC--c--EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKA-YGLGA--D--YV--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a-~~LGA--d--~v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +.+++|+||++|||..+++.....| ++|+.+++++++.+.+ .+++.  .  .+  .|.++.. ...+.+.+.+..+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            6689999999999999887777789 8999999888766544 33321  1  11  3544421 122333443334579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999988874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.056  Score=55.16  Aligned_cols=79  Identities=22%  Similarity=0.069  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC---CcE-EEeCCccchhHHHHHHHh---cCCCee
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG---ADY-VVDHTIRELDRFANQILS---YGSELD  182 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG---Ad~-vId~~~~~~~d~~~~i~~---~~~gvD  182 (655)
                      +.+++|+||+|+||...+......|++|+++++++++.+.+. .+.   +.. ..|..+.  +++...+.+   ..+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDA--ASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCH--HHHHHHHHHHHHHcCCCC
Confidence            468999999999999988877778999999999887765443 232   211 1344332  223222222   223689


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      +++.+.|..
T Consensus        80 ~vi~~ag~~   88 (257)
T PRK07074         80 VLVANAGAA   88 (257)
T ss_pred             EEEECCCCC
Confidence            999998753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.82  E-value=0.05  Score=55.57  Aligned_cols=79  Identities=19%  Similarity=0.083  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccchhHHHH---HHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRELDRFAN---QILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~~~d~~~---~i~~~~~  179 (655)
                      .|.+|+|+|++|+||..+++.....|++|+.++++.++.+.+    +..|.+.   ..|.++.  ++..+   .+.+..+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE--QELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcC
Confidence            588999999999999999987778899999998887665443    2334322   1344442  22322   2333234


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.053  Score=55.96  Aligned_cols=78  Identities=18%  Similarity=0.031  Sum_probs=51.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|+|+||+|+||...++.....|++|+++++++++.+.+    ++.|.+..   .|..+.. .+++.+.+.+..+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999998887777899999999988765543    23343322   2333321 112233333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999885

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.80  E-value=0.04  Score=55.67  Aligned_cols=98  Identities=19%  Similarity=0.092  Sum_probs=63.9

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ...+ ++|++||-.|+  |.|..+..+++..+  .+|++++.+++-.+.++    +.|.+.+ .....   |..... ..
T Consensus        71 ~l~~-~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~g---d~~~~~-~~  142 (212)
T PRK13942         71 LLDL-KEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVG---DGTLGY-EE  142 (212)
T ss_pred             HcCC-CCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC---CcccCC-Cc
Confidence            3456 79999999997  66778888888875  58999999988776664    3554332 11111   110000 01


Q ss_pred             CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        178 GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+|+|+-+.... .   .+..++.|++||++++.
T Consensus       143 ~~~fD~I~~~~~~~~~---~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        143 NAPYDRIYVTAAGPDI---PKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             CCCcCEEEECCCcccc---hHHHHHhhCCCcEEEEE
Confidence            23699987544333 4   56788899999998875

>PRK09135 pteridine reductase; Provisional

Probab=95.78  E-value=0.055  Score=54.50  Aligned_cols=79  Identities=18%  Similarity=0.077  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHH----HhCCCc---E-EEeCCccchhHHHHH---HHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKA----YGLGAD---Y-VVDHTIRELDRFANQ---ILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a----~~LGAd---~-vId~~~~~~~d~~~~---i~~~  177 (655)
                      .+.+|+|+||+|++|..+++.....|++|++++++. ++.+.+    ...+..   . ..|.++.  +++.+.   +.+.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDP--DALPELVAACVAA   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCH--HHHHHHHHHHHHH
Confidence            568899999999999988887777899999998753 333322    222211   1 1344432  122222   2222


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+|+.++|.
T Consensus        83 ~~~~d~vi~~ag~   95 (249)
T PRK09135         83 FGRLDALVNNASS   95 (249)
T ss_pred             cCCCCEEEECCCC
Confidence            3478999999874

>KOG1209|consensus

Probab=95.78  E-value=0.11  Score=52.44  Aligned_cols=104  Identities=17%  Similarity=0.157  Sum_probs=70.4

Q ss_pred             CCCEEEEEcC-CCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc-EEEeCCccc-hhHHHHHHHhcC-CCeeEE
Q psy14589        110 EPDTLFIIGA-NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD-YVVDHTIRE-LDRFANQILSYG-SELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~Ga-sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd-~vId~~~~~-~~d~~~~i~~~~-~gvDvV  184 (655)
                      ....|||+|+ +||||.++..--...|+.|++++|+-+..+.+. +.|.- .-+|.+++. ...+..++++.. +..|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            4567999886 689999887766677999999999988877665 66632 225555431 123445556543 479999


Q ss_pred             EeCCCcc--------hHHHHHHHHH----------------HhccccceEEEe
Q psy14589        185 HPGFTDP--------VYRARRKYFA----------------DLAFNYKHFFFF  213 (655)
Q Consensus       185 ~D~vG~~--------~~~~l~~~l~----------------~l~~gGrlv~v~  213 (655)
                      ++..|.+        ++++.+++++                +.+..|++|-+|
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvg  138 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVG  138 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEec
Confidence            9988865        2233444432                357789999987

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.78  E-value=0.065  Score=53.76  Aligned_cols=79  Identities=19%  Similarity=0.126  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHH----HHhCCCcEE-E--eCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAK----AYGLGADYV-V--DHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~----a~~LGAd~v-I--d~~~~~~~d~~~---~i~~~~  178 (655)
                      .+.+|+|+|++|++|..++......|++|+++.+++.+ .+.    +++.+.... +  |..+.  +++.+   .+.+.-
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA--ESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCH--HHHHHHHHHHHHHc
Confidence            56789999999999999999888889999777665542 222    223343322 2  44332  22322   222222


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            378999998875

>PRK05855 short chain dehydrogenase; Validated

Probab=95.77  E-value=0.046  Score=62.38  Aligned_cols=81  Identities=19%  Similarity=0.087  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .+.+++|+||+||||...++-....|++|+.+++++++.+.+    ++.|... +  .|.++.. ...+.+.+.+..+++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            567999999999999988887778899999999988776543    3345422 1  3444421 112333343334579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999875

>PRK05599 hypothetical protein; Provisional

Probab=95.76  E-value=0.052  Score=55.50  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=51.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE--E--EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY--V--VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~--v--Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      +++|+||++|+|...++... .|++|+.+++++++.+.+    ++.|.+.  +  .|..+.. .+++.+.+.+..+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999998877554 499999999988776554    3345432  2  3444321 12333444444457999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.+.|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9988875

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.73  E-value=0.064  Score=59.07  Aligned_cols=89  Identities=18%  Similarity=0.126  Sum_probs=55.8

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecChH--H--------------HHHHHhCCCcE-EE--e
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLA--AIQVGKAYGLTVFASVGCPV--G--------------VAKAYGLGADY-VV--D  161 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~--avQlAk~~Ga~Viat~~s~~--k--------------~~~a~~LGAd~-vI--d  161 (655)
                      ..+.+...|+++||+|+|+|+|++  .++.. ..||+|++++...+  +              .+.+++.|... .+  |
T Consensus        33 ~~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~D  111 (398)
T PRK13656         33 AQGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGD  111 (398)
T ss_pred             hcCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcC
Confidence            344443457899999999999999  45555 78999888763221  1              22345667542 22  4


Q ss_pred             CCccc-hhHHHHHHHhcCCCeeEEEeCCCcch
Q psy14589        162 HTIRE-LDRFANQILSYGSELDADHPGFTDPV  192 (655)
Q Consensus       162 ~~~~~-~~d~~~~i~~~~~gvDvV~D~vG~~~  192 (655)
                      ..+.. .+.+.+.+.+.-+++|+++.++|.+.
T Consensus       112 Vss~E~v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        112 AFSDEIKQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            44321 12344455554458999999998773

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.73  E-value=0.049  Score=56.11  Aligned_cols=81  Identities=16%  Similarity=0.110  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecCh--HHHHHH-HhCCCc---EEEeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCP--VGVAKA-YGLGAD---YVVDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~a-~~LGAd---~vId~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+|+  ++|||..+++.....|++|+.+++++  +..+.+ .+++..   ...|..+.. .+++.+.+.+..++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999  89999999887777899999987653  333333 344431   113444321 12333444443457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999998874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=95.71  E-value=0.047  Score=56.29  Aligned_cols=81  Identities=12%  Similarity=-0.059  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC------hHHHHHHHhCCCc-EE--EeCCccc-hhHHHHHHHhc
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGC------PVGVAKAYGLGAD-YV--VDHTIRE-LDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s------~~k~~~a~~LGAd-~v--Id~~~~~-~~d~~~~i~~~  177 (655)
                      .|++++|+||+  +|||..+++.....|++|+.+.++      ++..+.+.+.+.. .+  .|.++.. ...+.+.+.+.
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            58899999986  799999988777789999877543      2233333332221 12  3444321 12233344443


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus        85 ~g~iD~lv~nag~   97 (258)
T PRK07370         85 WGKLDILVHCLAF   97 (258)
T ss_pred             cCCCCEEEEcccc
Confidence            4579999998874

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=95.70  E-value=0.073  Score=55.11  Aligned_cols=90  Identities=18%  Similarity=0.072  Sum_probs=61.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .+|++|+-.|+ |. |.+++.+++ .|+ +|++++.++...+.+++    .|....+.....            ...+|+
T Consensus       118 ~~~~~VLDiGc-Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~------------~~~fD~  182 (250)
T PRK00517        118 LPGKTVLDVGC-GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG------------DLKADV  182 (250)
T ss_pred             CCCCEEEEeCC-cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC------------CCCcCE
Confidence            58999999998 44 777776555 677 59999999988877654    233111111110            004899


Q ss_pred             EEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+-..... ....+..+.+.|++||++++.+
T Consensus       183 Vvani~~~~~~~l~~~~~~~LkpgG~lilsg  213 (250)
T PRK00517        183 IVANILANPLLELAPDLARLLKPGGRLILSG  213 (250)
T ss_pred             EEEcCcHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            98766554 2234678888999999999876

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.70  E-value=0.034  Score=56.47  Aligned_cols=99  Identities=15%  Similarity=0.065  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEEE--------------eCCccchhHHHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYVV--------------DHTIRELDRFANQ  173 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~vI--------------d~~~~~~~d~~~~  173 (655)
                      ++|.+||+.|+  |.|.-++-+|+ +|.+|++++.|+.-++.+ ++.|.....              +....   |+.+.
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---D~~~~  106 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG---DFFAL  106 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc---cCCCC
Confidence            46779999998  78888888885 699999999999888775 333332111              00000   11110


Q ss_pred             HHhcCCCeeEEEeCCCc-----c-hHHHHHHHHHHhccccceEEEe
Q psy14589        174 ILSYGSELDADHPGFTD-----P-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       174 i~~~~~gvDvV~D~vG~-----~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      -....+.+|.|+|...-     + .-+-++...++|++||++++++
T Consensus       107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~  152 (213)
T TIGR03840       107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLIT  152 (213)
T ss_pred             CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence            00112358999996531     1 1122678888999999988876

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=95.69  E-value=0.028  Score=56.94  Aligned_cols=96  Identities=19%  Similarity=0.093  Sum_probs=61.9

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHH----HhCCCcEE-EeCCccchhHHHHHHHhcC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKA----YGLGADYV-VDHTIRELDRFANQILSYG  178 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a----~~LGAd~v-Id~~~~~~~d~~~~i~~~~  178 (655)
                      .+ ++|++||-.|+  |.|..++-+|+..|.  +|+++++.++-.+.+    ..+|.+.| +...+.     ..-..+ .
T Consensus        69 ~l-~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg-----~~g~~~-~  139 (209)
T PF01135_consen   69 DL-KPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG-----SEGWPE-E  139 (209)
T ss_dssp             TC--TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G-----GGTTGG-G
T ss_pred             hc-CCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch-----hhcccc-C
Confidence            46 89999999996  566677778888775  699999888655555    34566543 222221     111111 1


Q ss_pred             CCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..+|.|+-+.+.+.  .-...++.|++|||+|..
T Consensus       140 apfD~I~v~~a~~~--ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  140 APFDRIIVTAAVPE--IPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -SEEEEEESSBBSS----HHHHHTEEEEEEEEEE
T ss_pred             CCcCEEEEeeccch--HHHHHHHhcCCCcEEEEE
Confidence            27999998877763  146788899999999985

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.068  Score=54.73  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .+.+++|+||+|+||..+++.....|++|+++++. .++.+.+    +..|...   ..|.++.. ..++.+.+.+..++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57789999999999999988887889999877653 3333322    2334421   13444321 11222333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        88 iD~vi~~ag~   97 (258)
T PRK09134         88 ITLLVNNASL   97 (258)
T ss_pred             CCEEEECCcC
Confidence            9999999874

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.68  E-value=0.064  Score=55.13  Aligned_cols=80  Identities=18%  Similarity=0.083  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----H-hCCCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----Y-GLGAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~-~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      +|++++|+||++|||..+++.....|++|+.+.+ ++++.+.+    + ..|.. ..  +|.++.. .+.+.+.+.+..+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            6889999999999999999877788999987754 34443322    1 12432 12  3444321 1123333333334


Q ss_pred             CeeEEEeCCC
Q psy14589        180 ELDADHPGFT  189 (655)
Q Consensus       180 gvDvV~D~vG  189 (655)
                      ++|+++.+.|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            7899998876

>PRK04148 hypothetical protein; Provisional

Probab=95.66  E-value=0.039  Score=52.02  Aligned_cols=97  Identities=15%  Similarity=0.077  Sum_probs=62.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCcc----------------chhHHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIR----------------ELDRFAN  172 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~----------------~~~d~~~  172 (655)
                      .++.+|++.|. | .|...++..+.+|.+|+++|.+++..+.+++.|.+.+.+.--.                +..++..
T Consensus        15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~el~~   92 (134)
T PRK04148         15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPRDLQP   92 (134)
T ss_pred             ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCHHHHH
Confidence            35788999999 6 7764444444679999999999999998888776555431110                0113444


Q ss_pred             HHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceE
Q psy14589        173 QILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHF  210 (655)
Q Consensus       173 ~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv  210 (655)
                      .+.+...  ++|+++-..+++.   ....+++...+|..+
T Consensus        93 ~~~~la~~~~~~~~i~~l~~e~---~~~~~kl~ny~~~~~  129 (134)
T PRK04148         93 FILELAKKINVPLIIKPLSGEE---PIKELKLINYKGKPI  129 (134)
T ss_pred             HHHHHHHHcCCCEEEEcCCCCC---CCcceEEEecCCeEE
Confidence            4444432  6788887777775   445555555555433

>TIGR00438 rrmJ cell division protein FtsJ

Probab=95.64  E-value=0.094  Score=51.67  Aligned_cols=99  Identities=18%  Similarity=-0.003  Sum_probs=59.7

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhc--CC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAY-G-LTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSY--GS  179 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-G-a~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~--~~  179 (655)
                      ..+ ++|++||..|+ |.-| ++..+++.. + .+|++++.++..    ...+++.+ .|..+.   +..+.+.+.  .+
T Consensus        28 ~~i-~~g~~VLDiG~-GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~---~~~~~l~~~~~~~   97 (188)
T TIGR00438        28 KLI-KPGDTVLDLGA-APGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE---EVLNKIRERVGDD   97 (188)
T ss_pred             ccc-CCCCEEEEecC-CCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh---hHHHHHHHHhCCC
Confidence            445 78999999998 4444 445555544 3 489999998754    22344322 233321   233344433  23


Q ss_pred             CeeEEEe-C----CCcch----------HHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHP-G----FTDPV----------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D-~----vG~~~----------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+|+. .    .|...          .+.+..+.++|++||++++..
T Consensus        98 ~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        98 KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            7999995 2    22210          234778899999999998854

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.62  E-value=0.063  Score=56.00  Aligned_cols=81  Identities=17%  Similarity=0.064  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecCh---HHHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCP---VGVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~---~k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+  +|||..+++.....|++|+.+.+++   ++.+.+ .++|....  .|-.+.. .+.+.+.+.+..++
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   88 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK   88 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            67899999996  7999998888778899998887653   333333 34564222  3443321 12233344433357


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        89 iD~lv~nAG~   98 (272)
T PRK08159         89 LDFVVHAIGF   98 (272)
T ss_pred             CcEEEECCcc
Confidence            9999998874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.62  E-value=0.053  Score=56.31  Aligned_cols=81  Identities=14%  Similarity=0.075  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecCh---HHHHHHH-hCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCP---VGVAKAY-GLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~---~k~~~a~-~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+++|+||++  |||.++++.....|++|+.+++++   +..+.+. +.+...+  .|-.+.. .+.+.+.+.+..+.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            578999999975  999988877777899998887763   2222222 2232222  3444421 11233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        85 iD~linnAg~   94 (262)
T PRK07984         85 FDGFVHSIGF   94 (262)
T ss_pred             CCEEEECCcc
Confidence            9999999874

>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a

Probab=95.56  E-value=0.072  Score=44.08  Aligned_cols=72  Identities=18%  Similarity=0.298  Sum_probs=51.2

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccC--CcEEEec
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSC--SYINIIS  335 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~--~~v~iLG  335 (655)
                      ++.+...+ ++|.|+++++.+++.++|+..+.+...........|-++... +..+.++++.|++.-  ..++++|
T Consensus         2 ~l~i~~~d-~~g~l~~I~~~la~~~inI~~i~~~~~~~~~~~i~~~v~v~~~~~~l~~l~~~L~~i~~V~~v~~~~   76 (76)
T cd04888           2 TLSLLLEH-RPGVLSKVLNTIAQVRGNVLTINQNIPIHGRANVTISIDTSTMNGDIDELLEELREIDGVEKVELVG   76 (76)
T ss_pred             EEEEEecC-CCchHHHHHHHHHHcCCCEEEEEeCCCCCCeEEEEEEEEcCchHHHHHHHHHHHhcCCCeEEEEEeC
Confidence            45666777 899999999999999999999976432222344555555555 448899999998774  3454443

a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and related domains. This CD includes the C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and other related ACT domains. In B. subtilis, the upstream gene of pheB, pheA encodes prephenate dehydratase (PDT). The presumed product of the pheB gene is chorismate mutase (CM). The deduced product of the B. subtilis pheB gene, however, has no significant homology to the CM portion of the bifunctional CM-PDT of Escherichia coli. The presence of an ACT domain lends support to the prediction that these proteins function as a phenylalanine-binding regulatory protein. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.56  E-value=0.045  Score=55.05  Aligned_cols=79  Identities=18%  Similarity=0.096  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHHH----hCCCcE-E--EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKAY----GLGADY-V--VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~~---~i~~~~  178 (655)
                      .+.+++|+||+|++|...+......|++|+.+ ++++++.+.+.    ..+... +  .|..+.  +++.+   .+.+..
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   81 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE--EDVENLVEQIVEKF   81 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHh
Confidence            46789999999999999888777789999888 88776654432    223221 1  233332  22322   222222


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+|+.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (247)
T PRK05565         82 GKIDILVNNAGI   93 (247)
T ss_pred             CCCCEEEECCCc
Confidence            379999998875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.55  E-value=0.053  Score=54.47  Aligned_cols=79  Identities=20%  Similarity=0.057  Sum_probs=49.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      ++++|+|++|++|..+++.....|++|+++.+ ++++.+..    ...+.. .+  .|..+.. .+.+.+.+.+..+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            46899999999999999888888999988877 44433322    122221 11  3444321 0122233333345789


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +|+.+.|.
T Consensus        81 ~vi~~ag~   88 (242)
T TIGR01829        81 VLVNNAGI   88 (242)
T ss_pred             EEEECCCC
Confidence            99999874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.55  E-value=0.059  Score=55.27  Aligned_cols=77  Identities=23%  Similarity=0.183  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh--CCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG--LGADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~--LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++++......  .++..+ .|..+. .+++.+.+   ..++|+|+.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~~~---~~~~d~vi~   91 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG-SDKLVEAI---GDDSDAVIC   91 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC-HHHHHHHh---hcCCCEEEE
Confidence            56799999999999999998877789999999888776543322  123322 243331 01222222   136899998


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      +.|.
T Consensus        92 ~~g~   95 (251)
T PLN00141         92 ATGF   95 (251)
T ss_pred             CCCC
Confidence            8764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.54  E-value=0.078  Score=56.26  Aligned_cols=81  Identities=20%  Similarity=0.131  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHH----HHHhCCCcEEE---eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVA----KAYGLGADYVV---DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~----~a~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|.+++|+||+||||...++.....|++|+..+++. ++.+    .+++.|.....   |..+.. ...+.+.+.+ .++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence            688999999999999998887777899998887643 2322    23344543222   333321 1123333334 357


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|..
T Consensus        90 iD~li~nAG~~  100 (306)
T PRK07792         90 LDIVVNNAGIT  100 (306)
T ss_pred             CCEEEECCCCC
Confidence            99999988753

>PRK07069 short chain dehydrogenase; Validated

Probab=95.52  E-value=0.065  Score=54.22  Aligned_cols=79  Identities=22%  Similarity=0.103  Sum_probs=50.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHHH----hC-CCcE----EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKAY----GL-GADY----VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a~----~L-GAd~----vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +++|+|++|+||...++.....|++|++++++ +++.+.+.    +. +...    ..|..+.. ...+.+.+.+..+++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999988877789999999887 55444332    21 2221    23544431 112223333333478


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+++.++|..
T Consensus        81 d~vi~~ag~~   90 (251)
T PRK07069         81 SVLVNNAGVG   90 (251)
T ss_pred             cEEEECCCcC
Confidence            9999988743

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.52  E-value=0.059  Score=54.39  Aligned_cols=97  Identities=18%  Similarity=0.066  Sum_probs=62.8

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ..+ ++|++||-.|+  |.|..++.+|+..+.  +|++++.+++-.+.++    ++|.+.+.- ...   |..+... ..
T Consensus        73 l~~-~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~-~~~---d~~~~~~-~~  144 (215)
T TIGR00080        73 LEL-KPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIV-IVG---DGTQGWE-PL  144 (215)
T ss_pred             hCC-CCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEE-EEC---CcccCCc-cc
Confidence            346 78999998886  667788888887654  6999999988776654    456543311 111   1111111 11


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..+|+|+-..... .   .+...+.|++||+++..
T Consensus       145 ~~fD~Ii~~~~~~~~---~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       145 APYDRIYVTAAGPKI---PEALIDQLKEGGILVMP  176 (215)
T ss_pred             CCCCEEEEcCCcccc---cHHHHHhcCcCcEEEEE
Confidence            3699887443333 4   56778899999998875

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.52  E-value=0.053  Score=54.46  Aligned_cols=96  Identities=14%  Similarity=-0.059  Sum_probs=63.1

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHHHHHH
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFANQIL  175 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~~~i~  175 (655)
                      ..+ ++|++||-.|+  |.|..+..+++..+  .+|++++.+++-.+.++    +.|..   .++...      ..+...
T Consensus        68 l~~-~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~~~  138 (205)
T PRK13944         68 IEP-RPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRGLE  138 (205)
T ss_pred             cCC-CCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccCCc
Confidence            355 78999998897  66778888888764  58999999987665554    45543   223211      111111


Q ss_pred             hcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        176 SYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      . .+.+|+|+-+.+...  ..+..++.|++||+++..
T Consensus       139 ~-~~~fD~Ii~~~~~~~--~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 K-HAPFDAIIVTAAAST--IPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             c-CCCccEEEEccCcch--hhHHHHHhcCcCcEEEEE
Confidence            1 136999886655442  146778899999998764

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.048  Score=54.66  Aligned_cols=74  Identities=18%  Similarity=0.186  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EEEeCCccchhHHHHHHHhc--CCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRELDRFANQILSY--GSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~~~d~~~~i~~~--~~gvDvV~D  186 (655)
                      .+.+|+|+||+|++|..+++.....|++|+++++++++     ..... ...|..+.  +++.+.+.+.  ..++|+++.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADI--EQTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCH--HHHHHHHHHHHHhCCCcEEEE
Confidence            46789999999999999998888889999999887654     12221 12344442  1232223222  126899999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      +.|.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            8875

>TIGR02415 23BDH acetoin reductases

Probab=95.45  E-value=0.098  Score=53.09  Aligned_cols=77  Identities=13%  Similarity=0.051  Sum_probs=50.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHH---HHHhcCCCe
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFAN---QILSYGSEL  181 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~~gv  181 (655)
                      .+++|+|++|+||..+++.....|++|+.+++++++.+.+    ++.|... +  .|..+.  +++.+   .+.+..+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK--DQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCC
Confidence            3699999999999999988888899999998887654332    3344321 1  243332  22322   233333478


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999998875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.44  E-value=0.055  Score=64.07  Aligned_cols=79  Identities=15%  Similarity=0.021  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h----CCCcEE----EeCCccchhHHHHHH---Hhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G----LGADYV----VDHTIRELDRFANQI---LSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~----LGAd~v----Id~~~~~~~d~~~~i---~~~  177 (655)
                      .|++|+|+||+|+||..+++.....|++|++++++.++.+.+. +    .|...+    .|.++.  +++.+.+   .+.
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~--~~v~~a~~~i~~~  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE--QAVKAAFADVALA  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH--HHHHHHHHHHHHh
Confidence            5789999999999999999877788999999999887665442 1    233222    344432  2333332   222


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence            3479999999884

>PF13710 ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B

Probab=95.44  E-value=0.072  Score=43.53  Aligned_cols=61  Identities=10%  Similarity=0.243  Sum_probs=51.5

Q ss_pred             CCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEE
Q psy14589        271 DEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYIN  332 (655)
Q Consensus       271 d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~  332 (655)
                      |+||.|.+++.+|..+|+|+..|..-| ...+..+.+-+.+++ +..+..+.+.|++..+-++
T Consensus         1 n~~GvL~Ri~~vf~rRg~nI~sl~v~~-~~~~~~~riti~v~~~~~~i~~l~~Ql~KlidV~~   62 (63)
T PF13710_consen    1 NQPGVLNRITGVFRRRGFNIESLSVGP-TEDPGISRITIVVSGDDREIEQLVKQLEKLIDVVK   62 (63)
T ss_dssp             SSTTHHHHHHHHHHTTT-EECEEEEEE--SSTTEEEEEEEEES-CCHHHHHHHHHHCSTTEEE
T ss_pred             CCcHHHHHHHHHHhcCCeEEeeEEeee-cCCCCEEEEEEEEeeCchhHHHHHHHHhccCCeEe
Confidence            379999999999999999999999988 445667889999999 8899999999998876544

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.42  E-value=0.04  Score=56.59  Aligned_cols=78  Identities=15%  Similarity=0.108  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|.+++|+|++|+||..+++.....|++|+.+++++++.+.   ..+.. ..|..+.. ..++.+.+.+..+.+|+++.+
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   84 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN   84 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999998888889999999887654321   11211 13444321 112223333333478999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      .|.
T Consensus        85 Ag~   87 (266)
T PRK06171         85 AGI   87 (266)
T ss_pred             Ccc
Confidence            874

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.097  Score=51.99  Aligned_cols=76  Identities=20%  Similarity=0.081  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEE--eCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVV--DHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +.+++|+||+|++|...+..+... .+|+++++++++.+.+.+ ...-+++  |..+.  +++.+.+.+. +++|+++.+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~-~~id~vi~~   78 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP--EAIAAAVEQL-GRLDVLVHN   78 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH--HHHHHHHHhc-CCCCEEEEC
Confidence            458999999999999888766556 899999998877655543 2112222  33322  2333333322 268999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        79 ag~   81 (227)
T PRK08219         79 AGV   81 (227)
T ss_pred             CCc
Confidence            875

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.41  E-value=0.065  Score=52.11  Aligned_cols=51  Identities=24%  Similarity=0.348  Sum_probs=42.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      ++-+|+|.|+ |.+|.-|+++++.+|++|+..+..+++.+....+++..+..
T Consensus        19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~   69 (168)
T PF01262_consen   19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEV   69 (168)
T ss_dssp             -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEE
T ss_pred             CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEE
Confidence            4578999998 99999999999999999999999999888888888866543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.41  E-value=0.065  Score=55.28  Aligned_cols=81  Identities=15%  Similarity=0.080  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecCh---HHHHHH-HhC-CCc-E--EEeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCP---VGVAKA-YGL-GAD-Y--VVDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~---~k~~~a-~~L-GAd-~--vId~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++++|+||+  +|||..+++.....|++|+.++++.   ++++.+ .++ |.. .  ..|..+.. .+.+.+.+.+..
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            68899999997  8999998887777899998886542   333333 233 221 1  13444321 122333444333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        86 g~ld~lv~nag~   97 (257)
T PRK08594         86 GVIHGVAHCIAF   97 (257)
T ss_pred             CCccEEEECccc
Confidence            579999988763

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.41  E-value=0.09  Score=53.43  Aligned_cols=79  Identities=15%  Similarity=0.113  Sum_probs=49.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHH----HHHhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVA----KAYGLGAD-YV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~----~a~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .+|+|+|++|+||..+++.....|++|++++++.. +.+    .+++.+.. .+  .|.++.. ...+.+.+.+..+++|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999998887788999999887542 221    22333432 12  3444321 1123334444335789


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99998874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.40  E-value=0.11  Score=53.29  Aligned_cols=81  Identities=15%  Similarity=0.022  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHH----HHhCCCcE---EEeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAK----AYGLGADY---VVDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~----a~~LGAd~---vId~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+++|+||+|+||..+++.....|++|+.+.++. ++.+.    +++.|...   ..|.++.. ..++.+.+.+..++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            688999999999999999998888999988877643 22222    23344321   23444421 01122223332347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            8999988875

>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains

Probab=95.38  E-value=0.081  Score=42.24  Aligned_cols=58  Identities=12%  Similarity=0.224  Sum_probs=43.5

Q ss_pred             EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589        265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS  327 (655)
Q Consensus       265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~  327 (655)
                      .+.+++ +||.|+++++.++++++|+..+...+... .+...+.+.++.   ..++++.|++.
T Consensus         3 ~v~~~d-~pG~L~~i~~~l~~~~~nI~~i~~~~~~~-~~~~~v~~~ve~---~~~~~~~L~~~   60 (65)
T cd04882           3 AVEVPD-KPGGLHEILQILSEEGINIEYMYAFVEKK-GGKALLIFRTED---IEKAIEVLQER   60 (65)
T ss_pred             EEEeCC-CCcHHHHHHHHHHHCCCChhheEEEccCC-CCeEEEEEEeCC---HHHHHHHHHHC
Confidence            456777 99999999999999999999888766543 345556677754   55677777654

Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.37  E-value=0.096  Score=53.03  Aligned_cols=81  Identities=17%  Similarity=0.121  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH-HhCCCc-EE--EeCCccc-hhHHHHHHHhcCC-Cee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA-YGLGAD-YV--VDHTIRE-LDRFANQILSYGS-ELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a-~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~-gvD  182 (655)
                      .+.+++|+||+|+||..++......|++|+.+++ ++++.+.+ .+++.. .+  .|..+.. ..++.+.+.+..+ ++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            4678999999999999999887788999987654 44444433 334422 11  2443321 0122233333333 389


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.+.|.
T Consensus        84 ~li~~ag~   91 (253)
T PRK08642         84 TVVNNALA   91 (253)
T ss_pred             EEEECCCc
Confidence            99988763

>KOG1200|consensus

Probab=95.37  E-value=0.086  Score=52.64  Aligned_cols=81  Identities=15%  Similarity=0.016  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH-HHHhCCC--cEE---EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA-KAYGLGA--DYV---VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~-~a~~LGA--d~v---Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      ...++|+|+++|||.+..|.....|++|++.+.+....+ .++.||.  ++.   .|..+.. .....++..+.-+.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            345789999999999999999889999988887655433 3567776  443   3433321 11212223232337899


Q ss_pred             EEeCCCcc
Q psy14589        184 DHPGFTDP  191 (655)
Q Consensus       184 V~D~vG~~  191 (655)
                      +++|.|-.
T Consensus        94 lVncAGIt  101 (256)
T KOG1200|consen   94 LVNCAGIT  101 (256)
T ss_pred             EEEcCccc
Confidence            99999854

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=95.32  E-value=0.098  Score=52.93  Aligned_cols=81  Identities=15%  Similarity=0.092  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|.+++|+|++|+||..+++.....|++|+++.+ ++++.+..    ++.|... +  .|..+.. .++..+.+.+..+.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999877778999877644 33443322    3344332 1  2333321 11223333333346


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999998876

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.24  E-value=0.12  Score=53.51  Aligned_cols=94  Identities=15%  Similarity=0.113  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHH-hcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQIL-SYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~-~~~~gv  181 (655)
                      ++.+||=.|+  |.|..+..+++. |.+|++++.+++.++.+++    .|..   .++..      +..+ +. ...+.+
T Consensus        44 ~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~~-l~~~~~~~f  113 (255)
T PRK11036         44 RPLRVLDAGG--GEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQD-IAQHLETPV  113 (255)
T ss_pred             CCCEEEEeCC--CchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHHH-HhhhcCCCC
Confidence            5678998886  677888888875 8899999999988877754    3432   22221      1111 21 122368


Q ss_pred             eEEEeCCC----cchHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADHPGFT----DPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~D~vG----~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+|+-...    .+....++.+.+.|++||+++++.
T Consensus       114 D~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        114 DLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             CEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            99884321    111234788999999999998764

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.11  Score=52.75  Aligned_cols=80  Identities=19%  Similarity=0.135  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH-H---hCCCc-EE--EeCCccchhHHHHHHHhc----
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA-Y---GLGAD-YV--VDHTIRELDRFANQILSY----  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a-~---~LGAd-~v--Id~~~~~~~d~~~~i~~~----  177 (655)
                      .+.+++|+|++|++|..+++.....|++|++. .++.++.+.+ .   +.+.. .+  .|..+.  +++.+.+.+.    
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~i~~~~~~~~~~~   82 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSI--DGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCH--HHHHHHHHHHHHHh
Confidence            46799999999999999998777789998764 5666554333 2   22322 12  244432  2333333322    


Q ss_pred             ----C-CCeeEEEeCCCcc
Q psy14589        178 ----G-SELDADHPGFTDP  191 (655)
Q Consensus       178 ----~-~gvDvV~D~vG~~  191 (655)
                          + +++|+++.+.|..
T Consensus        83 ~~~~~~~~id~vi~~ag~~  101 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIG  101 (254)
T ss_pred             ccccCCCCccEEEECCCCC
Confidence                1 2689999988753

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.17  E-value=0.087  Score=56.33  Aligned_cols=38  Identities=21%  Similarity=0.265  Sum_probs=32.1

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChHHH
Q psy14589        110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCPVGV  148 (655)
Q Consensus       110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~~k~  148 (655)
                      .|++++|+||  |+|||.++++.....|++|+. ++..+++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            6999999999  899999999988889999988 4444443

>PRK14967 putative methyltransferase; Provisional

Probab=95.17  E-value=0.18  Score=51.13  Aligned_cols=97  Identities=18%  Similarity=-0.003  Sum_probs=62.4

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .+ ++|++|+-.|+ |. |.+++.+++. |+ +|++++.+++..+.+++    .|....+...     |+.+.+.  .+.
T Consensus        33 ~~-~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~-----d~~~~~~--~~~  101 (223)
T PRK14967         33 GL-GPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG-----DWARAVE--FRP  101 (223)
T ss_pred             cc-CCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC-----chhhhcc--CCC
Confidence            34 68899999998 44 8888888875 66 99999999887765543    4543222111     2322221  237


Q ss_pred             eeEEEeCCCc---------------------c----hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTD---------------------P----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~---------------------~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+|+...+-                     .    ..+.+..+.+.|++||+++++-
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            9999864210                     0    0112456788999999988753

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.16  E-value=0.11  Score=54.20  Aligned_cols=95  Identities=13%  Similarity=0.073  Sum_probs=59.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcC--CC-eeEEEeCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYG--SE-LDADHPGF  188 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~--~g-vDvV~D~v  188 (655)
                      +|+|+||+|.||..+++.+...|.+|.++++++++..   ..|...+ .|+.+.  +.+.+.++...  .+ +|.++-+.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~--~~l~~a~~~~~~~~g~~d~v~~~~   75 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDE--DTWDNPFSSDDGMEPEISAVYLVA   75 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCH--HHHHHHHhcccCcCCceeEEEEeC
Confidence            4899999999999999988888999999999876542   2343332 455543  23444443211  36 89998776


Q ss_pred             Ccc--hHHHHHHHHHHhcccc--ceEEE
Q psy14589        189 TDP--VYRARRKYFADLAFNY--KHFFF  212 (655)
Q Consensus       189 G~~--~~~~l~~~l~~l~~gG--rlv~v  212 (655)
                      +..  ..+.....++.++..|  ++|.+
T Consensus        76 ~~~~~~~~~~~~~i~aa~~~gv~~~V~~  103 (285)
T TIGR03649        76 PPIPDLAPPMIKFIDFARSKGVRRFVLL  103 (285)
T ss_pred             CCCCChhHHHHHHHHHHHHcCCCEEEEe
Confidence            642  1112445556655555  44443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.12  E-value=0.1  Score=54.01  Aligned_cols=81  Identities=17%  Similarity=0.122  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecC---hHHHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGC---PVGVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s---~~k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||  ++|||.++++.....|++|+.+.+.   +++.+.+ .++|...+  .|..+.. .+.+.+.+.+..++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            6789999996  5799999888777789999887543   3333333 34554322  3444331 11233333333357


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999998874

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=95.11  E-value=0.045  Score=58.01  Aligned_cols=96  Identities=10%  Similarity=0.001  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .+|++|+-.|+ |. |.+++.+++ .|+ +|++++.++...+.+++    .+....+.....   +..   ....+++|+
T Consensus       158 ~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~~~---~~~~~~fDl  228 (288)
T TIGR00406       158 LKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---YLE---QPIEGKADV  228 (288)
T ss_pred             CCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---ccc---cccCCCceE
Confidence            57899999998 44 777777776 566 89999999987777654    232211111110   111   011237999


Q ss_pred             EEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+...... ..+.+..+.+.|++||++++.|
T Consensus       229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sg  259 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPGGWLILSG  259 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            98765444 2234677889999999999877

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.08  E-value=0.12  Score=55.91  Aligned_cols=76  Identities=17%  Similarity=0.124  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC--CC-cEEE--eCCccchhHHHHHHHhcCCCee
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL--GA-DYVV--DHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L--GA-d~vI--d~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      +.+.+|||+||+|.||..+++.....|.+|++++++.++.+.+. .+  +. -.++  |..+.  +.+.+.+    .++|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~----~~~d   81 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE--GSFDEAV----KGCD   81 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH--HHHHHHH----cCCC
Confidence            57889999999999999999988888999999888776554432 11  21 1122  22221  1222222    2579


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +|+.+++.
T Consensus        82 ~Vih~A~~   89 (353)
T PLN02896         82 GVFHVAAS   89 (353)
T ss_pred             EEEECCcc
Confidence            99988764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.06  E-value=0.12  Score=52.25  Aligned_cols=77  Identities=16%  Similarity=0.063  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YV--VDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      .+++++|+|++|++|...++.....|++|++++++.     ....+.. ..  .|..+.. .++..+.+.+..+.+|+++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV   81 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            678999999999999999988878899999998865     2222221 11  2333321 1122223333334789999


Q ss_pred             eCCCcc
Q psy14589        186 PGFTDP  191 (655)
Q Consensus       186 D~vG~~  191 (655)
                      .+.|..
T Consensus        82 ~~ag~~   87 (252)
T PRK08220         82 NAAGIL   87 (252)
T ss_pred             ECCCcC
Confidence            998753

>PRK07201 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.11  Score=60.68  Aligned_cols=81  Identities=21%  Similarity=0.145  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+++|+||+||+|..+++.....|++|+++++++++.+.+.    +.|....   .|..+.. ..++.+.+.+..+++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999998877778999999999887765542    2343221   2444321 012223333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus       450 d~li~~Ag~  458 (657)
T PRK07201        450 DYLVNNAGR  458 (657)
T ss_pred             CEEEECCCC
Confidence            999999884

>cd04878 ACT_AHAS N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS)

Probab=95.04  E-value=0.14  Score=41.01  Aligned_cols=66  Identities=14%  Similarity=0.183  Sum_probs=47.5

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccC-CCCCcceEEEEEecCCchHHHHHHHHHccCCc
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSS-TRIENNYEFMVECAPGGDLSSVIESLRSSCSY  330 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~-~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~~  330 (655)
                      ++.+...+ ++|.|.++++.|+++++|+..+...+. ......+.+-++.. +..+.+++++|++.+.-
T Consensus         2 ~l~i~~~d-~~g~l~~i~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~v   68 (72)
T cd04878           2 TLSVLVEN-EPGVLNRISGLFARRGFNIESLTVGPTEDPGISRITIVVEGD-DDVIEQIVKQLNKLVDV   68 (72)
T ss_pred             EEEEEEcC-CCcHHHHHHHHHHhCCCCEEEEEeeecCCCCeEEEEEEEECC-HHHHHHHHHHHhCCccE
Confidence            35566666 899999999999999999999987654 22223344444433 37888999999877553

ACT_AHAS: N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS). AHAS catalyses the first common step in the biosynthesis of the three branched-chain amino acids. The first step involves the condensation of either pyruvate or 2-ketobutyrate with the two-carbon hydroxyethyl fragment derived from another pyruvate molecule, covalently bound to the coenzyme thiamine diphosphate. Bacterial AHASs generally consist of regulatory and catalytic subunits. The effector (valine) binding sites are proposed to be located in two symmetrically related positions in the interface between a pair of N-terminal ACT domains with the C-terminal domain of IlvH contacting the catalytic dimer. Plants Arabidopsis and Oryza have tandem IlvH subunits; both the first and second ACT domain sequences are present in this CD. Members of

>PRK12744 short chain dehydrogenase; Provisional

Probab=95.01  E-value=0.13  Score=52.58  Aligned_cols=81  Identities=14%  Similarity=0.059  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHH----HHhCCCcE---EEeCCccc-hhHHHHHHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAK----AYGLGADY---VVDHTIRE-LDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~----a~~LGAd~---vId~~~~~-~~d~~~~i~~~  177 (655)
                      .|.+|+|+|++|+||..+++.....|++|+.++++.    ++.+.    ++..|...   ..|..+.. ...+.+.+.+.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            578999999999999999988878899976665432    22221    22335432   13444321 01222233333


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.+.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            3478999998875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.01  E-value=0.095  Score=55.62  Aligned_cols=41  Identities=17%  Similarity=-0.002  Sum_probs=34.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA  149 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~  149 (655)
                      .+|.+|+|+||+|.||..+++.....|.+|++++++.++.+
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            36889999999999999999877778999998888765433

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.00  E-value=0.068  Score=54.46  Aligned_cols=99  Identities=13%  Similarity=0.093  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE--------------EeCCccchhHHHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV--------------VDHTIRELDRFANQ  173 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v--------------Id~~~~~~~d~~~~  173 (655)
                      .++.+||+.|+  |.|.-++-||. +|.+|++++.++..++.+. +.|....              |+....   |+.+.
T Consensus        36 ~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~---D~~~l  109 (218)
T PRK13255         36 PAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG---DFFAL  109 (218)
T ss_pred             CCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC---cccCC
Confidence            46789999998  78888888886 7999999999998877653 3332211              000000   11111


Q ss_pred             HHhcCCCeeEEEeCCC-----cc-hHHHHHHHHHHhccccceEEEe
Q psy14589        174 ILSYGSELDADHPGFT-----DP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       174 i~~~~~gvDvV~D~vG-----~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      -....+.+|.|+|..-     .+ -.+-++...++|++||+++++.
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~  155 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT  155 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence            0011136899998552     11 1122677788999999977765

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.96  E-value=0.15  Score=52.32  Aligned_cols=81  Identities=12%  Similarity=0.041  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC-----------hHH----HHHHHhCCCcEE---EeCCccc-hh
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGC-----------PVG----VAKAYGLGADYV---VDHTIRE-LD  168 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s-----------~~k----~~~a~~LGAd~v---Id~~~~~-~~  168 (655)
                      +|.+|+|+||+  +|||...++.....|++|+.+.++           .++    .+.+++.|....   .|.++.. ..
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            68999999998  499999998888899999887432           111    122344565322   2433321 11


Q ss_pred             HHHHHHHhcCCCeeEEEeCCCc
Q psy14589        169 RFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       169 d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      ++.+.+.+..+.+|+++.+.|.
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~  106 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAY  106 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCC
Confidence            2333333333468999988874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.92  E-value=0.12  Score=57.60  Aligned_cols=75  Identities=12%  Similarity=0.017  Sum_probs=54.8

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHH-HhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKA-YGLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a-~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      +.+  .|.+|+|.|+ |++|.+++..++..|+ +++.+.|+.+|.+.+ .++|...++.+.     ++.+.+.    .+|
T Consensus       177 ~~l--~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~-----~l~~~l~----~aD  244 (414)
T PRK13940        177 DNI--SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS-----ELPQLIK----KAD  244 (414)
T ss_pred             cCc--cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH-----HHHHHhc----cCC
Confidence            445  7889999999 9999999998888997 788888888776555 445522333321     2333332    589


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      +|+.|++++
T Consensus       245 iVI~aT~a~  253 (414)
T PRK13940        245 IIIAAVNVL  253 (414)
T ss_pred             EEEECcCCC
Confidence            999999998

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=94.92  E-value=0.12  Score=53.25  Aligned_cols=79  Identities=11%  Similarity=0.024  Sum_probs=47.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHH-HhC----CCcE---EEeCCccc-h----hHHHHHHHhc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKA-YGL----GADY---VVDHTIRE-L----DRFANQILSY  177 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a-~~L----GAd~---vId~~~~~-~----~d~~~~i~~~  177 (655)
                      .+++|+||+||||...++.....|++|+++++. +++.+.+ .++    |...   ..|..+.. .    +++.+.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            368999999999999998887899999887643 3444332 222    2111   13444321 0    1112222222


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus        82 ~g~iD~lv~nAG~   94 (267)
T TIGR02685        82 FGRCDVLVNNASA   94 (267)
T ss_pred             cCCceEEEECCcc
Confidence            3479999988874

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=94.88  E-value=0.15  Score=51.29  Aligned_cols=77  Identities=18%  Similarity=0.094  Sum_probs=49.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcE-E--EeCCccchhHHHH---HHHhcCCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADY-V--VDHTIRELDRFAN---QILSYGSE  180 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~~g  180 (655)
                      .+++|+||+|+||...++.....|++|+++ .+++++.+.+    ++.|... +  .|..+.  +++.+   .+.+..++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDE--NQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCH--HHHHHHHHHHHHhCCC
Confidence            479999999999999998877889998764 4555544332    3344321 1  344432  22333   33333457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        80 id~vi~~ag~   89 (247)
T PRK09730         80 LAALVNNAGI   89 (247)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>cd04874 ACT_Af1403 N-terminal ACT domain of the yet uncharacterized, small (~133 a

Probab=94.87  E-value=0.19  Score=40.42  Aligned_cols=64  Identities=19%  Similarity=0.210  Sum_probs=47.8

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS  329 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~  329 (655)
                      ++.+..++ ++|.|+++++.++++++|+..+...+..  .+...+.+++++...+.++++.|++...
T Consensus         2 ~l~i~~~d-~~g~l~~i~~~l~~~~~~i~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~L~~~~~   65 (72)
T cd04874           2 ALSIIAED-KPGVLRDLTGVIAEHGGNITYTQQFIER--EGKARIYMELEGVGDIEELVEELRSLPI   65 (72)
T ss_pred             eEEEEeCC-CCChHHHHHHHHHhCCCCEEEEEEeccC--CCeEEEEEEEeccccHHHHHHHHhCCCC
Confidence            35566677 8999999999999999999988765542  3345566777664567788888887644

a.), putative amino acid binding protein, Af1403, and related domains. This CD includes the N-terminal ACT domain of the yet uncharacterized, small (~133 a.a.), putative amino acid binding protein, Af1403, from Archaeoglobus fulgidus and other related archeal ACT domains. Members of this CD belong to the superfamily of ACT regulatory domains.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=94.86  E-value=0.089  Score=55.86  Aligned_cols=76  Identities=18%  Similarity=0.068  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hC-CC---cEEE--eCCccchhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GL-GA---DYVV--DHTIRELDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~L-GA---d~vI--d~~~~~~~d~~~~i~~~~~  179 (655)
                      ..|.+|+|+||+|+||..+++.....|.+|+++++++++.+...   .. +.   -.++  |..+.  +++.+.+.    
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~----   76 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDE--GSFELAID----   76 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCc--hHHHHHHc----
Confidence            35789999999999999999888888999988877765433221   11 21   1222  33332  12333232    


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+|+.++|.
T Consensus        77 ~~d~vih~A~~   87 (325)
T PLN02989         77 GCETVFHTASP   87 (325)
T ss_pred             CCCEEEEeCCC
Confidence            58999998873

>PRK08317 hypothetical protein; Provisional

Probab=94.85  E-value=0.09  Score=52.66  Aligned_cols=103  Identities=17%  Similarity=0.039  Sum_probs=65.1

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHhC--CCcEEEeCCccchhHHHHHHHhcC
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYGL--GADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~L--GAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      +...+ +++++||-.|+ | .|..+..+++..+  .+|++++.+++.++.+++.  +....+.....   +..+ ..-..
T Consensus        13 ~~~~~-~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~---d~~~-~~~~~   85 (241)
T PRK08317         13 ELLAV-QPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG---DADG-LPFPD   85 (241)
T ss_pred             HHcCC-CCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec---cccc-CCCCC
Confidence            34456 78999999998 3 4888899998874  5899999999888777654  11111111111   1110 00012


Q ss_pred             CCeeEEEeCC-----CcchHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGF-----TDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~v-----G~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+|+|+-..     ... -..+....++|++||++++..
T Consensus        86 ~~~D~v~~~~~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         86 GSFDAVRSDRVLQHLEDP-ARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CCceEEEEechhhccCCH-HHHHHHHHHHhcCCcEEEEEe
Confidence            3688877432     222 134788899999999998764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.84  E-value=0.17  Score=50.69  Aligned_cols=79  Identities=16%  Similarity=0.056  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHH----HhCCCc-EE--EeCCccchhHHHHH---HHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKA----YGLGAD-YV--VDHTIRELDRFANQ---ILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a----~~LGAd-~v--Id~~~~~~~d~~~~---i~~~~  178 (655)
                      +..+|+|+||+|++|..+++.....|.+|+++.++..+ .+.+    .+.+.. .+  .|..+.  +++.+.   +.+..
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~   82 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDK--AALEAAVAAAVERF   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCH--HHHHHHHHHHHHHc
Confidence            45689999999999999999888899998776655432 2222    233322 11  233332  233332   22223


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+|+.++|.
T Consensus        83 ~~id~vi~~ag~   94 (249)
T PRK12825         83 GRIDILVNNAGI   94 (249)
T ss_pred             CCCCEEEECCcc
Confidence            478999998873

>PRK06737 acetolactate synthase 1 regulatory subunit; Validated

Probab=94.84  E-value=0.18  Score=42.89  Aligned_cols=69  Identities=7%  Similarity=0.158  Sum_probs=54.7

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEE
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINI  333 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~i  333 (655)
                      ++...+.| +||-|.++..+|+.+|.|+..+..-|+.. ++-..+-+-+.+ +..+.++.+.|++.-+-+++
T Consensus         4 tisi~v~n-~pGVL~Ri~~lf~rRgfNI~Sl~vg~te~-~~~sriti~~~~~~~~i~qi~kQL~KLidV~~V   73 (76)
T PRK06737          4 TFSLVIHN-DPSVLLRISGIFARRGYYISSLNLNERDT-SGVSEMKLTAVCTENEATLLVSQLKKLINVLQV   73 (76)
T ss_pred             EEEEEEec-CCCHHHHHHHHHhccCcceEEEEecccCC-CCeeEEEEEEECCHHHHHHHHHHHhCCcCEEEE
Confidence            45555667 89999999999999999999999888663 455666677677 78889999999987664443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.84  E-value=0.091  Score=56.64  Aligned_cols=77  Identities=10%  Similarity=-0.017  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCC----CcEE-EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLG----ADYV-VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LG----Ad~v-Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .|.+|+|+||+|.||..+++.....|.+|+++++++...... ..++    ...+ .|-.+.  +++.+.+.+.  ++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~--~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA--AKLRKAIAEF--KPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH--HHHHHHHhhc--CCCE
Confidence            578999999999999999998888899999998776543222 2222    1111 233332  2333333322  5799


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      |+.++|.
T Consensus        79 vih~A~~   85 (349)
T TIGR02622        79 VFHLAAQ   85 (349)
T ss_pred             EEECCcc
Confidence            9999874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1210|consensus

Probab=94.83  E-value=0.14  Score=54.63  Aligned_cols=81  Identities=17%  Similarity=0.132  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCC----cE-------EEeCCccchhHHHHHHHh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGA----DY-------VVDHTIRELDRFANQILS  176 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGA----d~-------vId~~~~~~~d~~~~i~~  176 (655)
                      ++.-+|+|+|+|.|+|++....++..|+.|..+.++.+|+..+.+ ++-    ..       +.||.+-  +...++++.
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v--~~~~~~l~~  108 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSV--SKVIEELRD  108 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHH--HHHHhhhhh
Confidence            345789999999999999999999999999999999999887743 331    11       1222211  122333333


Q ss_pred             cCCCeeEEEeCCCcc
Q psy14589        177 YGSELDADHPGFTDP  191 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~  191 (655)
                      ..+.+|.++.|.|..
T Consensus       109 ~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVA  123 (331)
T ss_pred             ccCCcceEEEecCcc
Confidence            335789999999875

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.81  E-value=0.12  Score=51.51  Aligned_cols=96  Identities=15%  Similarity=0.127  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      .++.+||-.|+  |.|..++.+|+. |.+|++++.+++-++.+++    .|...+ +....   ++.+.  ...+.+|+|
T Consensus        29 ~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~---d~~~~--~~~~~fD~I   99 (197)
T PRK11207         29 VKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVV---DLNNL--TFDGEYDFI   99 (197)
T ss_pred             CCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEec---ChhhC--CcCCCcCEE
Confidence            46678999997  567788888875 8899999999876666543    333221 11111   22111  112368999


Q ss_pred             EeCCCc------chHHHHHHHHHHhccccceEEEe
Q psy14589        185 HPGFTD------PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       185 ~D~vG~------~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +....-      .....+....++|++||+++++.
T Consensus       100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207        100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            865331      11133677788899999976653

>cd04885 ACT_ThrD-I Tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase)

Probab=94.79  E-value=0.093  Score=43.16  Aligned_cols=62  Identities=21%  Similarity=0.193  Sum_probs=45.2

Q ss_pred             EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      .+++++ +||+|.++++.++. +.|++.+.-|-.........+-+++.+.+.+.++++.|++..
T Consensus         2 ~v~ipd-kPG~l~~~~~~i~~-~~nI~~~~~~~~~~~~~~v~v~ie~~~~~~~~~i~~~L~~~G   63 (68)
T cd04885           2 AVTFPE-RPGALKKFLELLGP-PRNITEFHYRNQGGDEARVLVGIQVPDREDLAELKERLEALG   63 (68)
T ss_pred             EEECCC-CCCHHHHHHHHhCC-CCcEEEEEEEcCCCCceEEEEEEEeCCHHHHHHHHHHHHHcC
Confidence            456777 99999999999999 999999877665533333444444444567888888887653

This CD includes each of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=94.77  E-value=0.17  Score=53.87  Aligned_cols=92  Identities=15%  Similarity=-0.013  Sum_probs=61.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      ..+|.|.|+ |.+|...++..+..|.  +|++.++++++.+.+++.|....+.  .    +..+.+    .+.|+|+.|+
T Consensus         6 ~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~--~----~~~~~~----~~aDvViiav   74 (307)
T PRK07502          6 FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT--T----SAAEAV----KGADLVILCV   74 (307)
T ss_pred             CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec--C----CHHHHh----cCCCEEEECC
Confidence            367999998 9999999888888884  8999999998888888888643221  1    122222    2579999999


Q ss_pred             CcchH-HHHHHHHHHhccccceEEEe
Q psy14589        189 TDPVY-RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~~~-~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..... +.+......++++..++.++
T Consensus        75 p~~~~~~v~~~l~~~l~~~~iv~dvg  100 (307)
T PRK07502         75 PVGASGAVAAEIAPHLKPGAIVTDVG  100 (307)
T ss_pred             CHHHHHHHHHHHHhhCCCCCEEEeCc
Confidence            87641 11233334556665555444

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=94.74  E-value=0.13  Score=52.08  Aligned_cols=77  Identities=21%  Similarity=0.129  Sum_probs=48.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCcEE---EeCCccchhHHHH---HHHhcCCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGADYV---VDHTIRELDRFAN---QILSYGSE  180 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~---~i~~~~~g  180 (655)
                      ++|+|+||+|+||..+++.....|++|+.+. +++++.+.+    ++.+....   .|..+.  +++.+   .+.+..++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE--ADVIAMFDAVQSAFGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH--HHHHHHHHHHHHhcCC
Confidence            4799999999999999888878899987664 444444332    23343221   233332  23333   33332347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        81 id~li~~ag~   90 (248)
T PRK06947         81 LDALVNNAGI   90 (248)
T ss_pred             CCEEEECCcc
Confidence            8999998874

>PRK06123 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.22  Score=50.28  Aligned_cols=79  Identities=18%  Similarity=0.095  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHH----HHhCCCcE-E--EeCCccchhHHHH---HHHhcCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAK----AYGLGADY-V--VDHTIRELDRFAN---QILSYGS  179 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~----a~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~~  179 (655)
                      +.+++|+|++|+||..+++.....|++|+.+. +++++.+.    +++.|... +  .|.++.  +++.+   .+.+..+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE--ADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCH--HHHHHHHHHHHHHhC
Confidence            45799999999999988887777899887665 33443332    23345432 2  244432  12333   3333334


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      .+|+++.++|..
T Consensus        80 ~id~li~~ag~~   91 (248)
T PRK06123         80 RLDALVNNAGIL   91 (248)
T ss_pred             CCCEEEECCCCC
Confidence            789999988753

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.68  E-value=0.32  Score=51.90  Aligned_cols=34  Identities=21%  Similarity=0.286  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEec
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVG  143 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~  143 (655)
                      .|++++|+|++  +|||.+.++.....|++|+..++
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~   42 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW   42 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence            78999999995  89999999999899999988653

>KOG1208|consensus

Probab=94.68  E-value=0.12  Score=55.49  Aligned_cols=81  Identities=15%  Similarity=0.111  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h----CCCcEE----EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G----LGADYV----VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~----LGAd~v----Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|.+++|+|+++|||...++-...+|++|+.+.++.++.+.++ +    .....+    +|-.+.. ...+++..++...
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            6789999999999999999888889999999999987665553 2    222222    3333321 1123444444444


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ..|+.+..+|-
T Consensus       114 ~ldvLInNAGV  124 (314)
T KOG1208|consen  114 PLDVLINNAGV  124 (314)
T ss_pred             CccEEEeCccc
Confidence            78888877664

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.18  Score=51.27  Aligned_cols=81  Identities=14%  Similarity=0.086  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHh----
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILS----  176 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~----  176 (655)
                      .|.+++|+|++||||..+++.....|++|+.+. +++++.+.+    ...|....   .|..+.. .+.+.+.+.+    
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            578999999999999999998888899998764 444443322    23343221   2333221 1122333322    


Q ss_pred             c-C-CCeeEEEeCCCc
Q psy14589        177 Y-G-SELDADHPGFTD  190 (655)
Q Consensus       177 ~-~-~gvDvV~D~vG~  190 (655)
                      . + +++|+++.++|.
T Consensus        83 ~~g~~~id~lv~~Ag~   98 (252)
T PRK12747         83 RTGSTKFDILINNAGI   98 (252)
T ss_pred             hcCCCCCCEEEECCCc
Confidence            1 1 268999998873

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=94.66  E-value=0.14  Score=53.06  Aligned_cols=100  Identities=15%  Similarity=0.064  Sum_probs=71.2

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      .++ .+|++|+=.|.  |-|.+++-||++.|.  +|+.....++..+.|+    +.|....+.....   |..+.+... 
T Consensus        90 ~gi-~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~---Dv~~~~~~~-  162 (256)
T COG2519          90 LGI-SPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG---DVREGIDEE-  162 (256)
T ss_pred             cCC-CCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec---ccccccccc-
Confidence            456 79999998776  677899999998875  8999999998887774    3455553333322   333222221 


Q ss_pred             CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       .+|+|+=-...+ |+.++.+.++|++||+++.+.
T Consensus       163 -~vDav~LDmp~P-W~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         163 -DVDAVFLDLPDP-WNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             -ccCEEEEcCCCh-HHHHHHHHHHhCCCcEEEEEc
Confidence             689877555544 566999999999999988864

>PRK07041 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.17  Score=50.52  Aligned_cols=73  Identities=23%  Similarity=0.182  Sum_probs=49.1

Q ss_pred             EEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC--CC-cEE--EeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        115 FIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL--GA-DYV--VDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       115 LI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L--GA-d~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      +|+||+|++|...++.....|++|+++++++++.+.+. .+  |. .++  .|..+.  +++.+.+.+ .+++|+++.++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~-~~~id~li~~a   77 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDE--AAVDAFFAE-AGPFDHVVITA   77 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCH--HHHHHHHHh-cCCCCEEEECC
Confidence            58999999999988877778999999999877655432 22  22 122  244432  234444433 34689999988


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus        78 g~   79 (230)
T PRK07041         78 AD   79 (230)
T ss_pred             CC
Confidence            75

>PLN00015 protochlorophyllide reductase

Probab=94.64  E-value=0.12  Score=54.73  Aligned_cols=76  Identities=22%  Similarity=0.228  Sum_probs=49.7

Q ss_pred             EEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHH-HhCCC--cE----EEeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        115 FIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKA-YGLGA--DY----VVDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       115 LI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a-~~LGA--d~----vId~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      +|+||++|||..+++.....| ++|+.+++++++.+.+ .+++.  ..    .+|..+.. ...+.+.+.+..+++|+++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999887777789 8999999888776544 33331  11    23554431 1223334443344799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus        81 nnAG~   85 (308)
T PLN00015         81 CNAAV   85 (308)
T ss_pred             ECCCc
Confidence            98874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=94.64  E-value=0.28  Score=50.12  Aligned_cols=99  Identities=11%  Similarity=-0.018  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCcEEEeCCc-cchhHHHHHHHh-cCCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGADYVVDHTI-RELDRFANQILS-YGSE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd~vId~~~-~~~~d~~~~i~~-~~~g  180 (655)
                      ..+.+||=.|.  ++|..++.+|..+.  .+++++++++++.+.|+    +.|.+..|..-. .   +..+.+.+ ..+.
T Consensus        58 ~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g---dal~~l~~~~~~~  132 (219)
T COG4122          58 SGPKRILEIGT--AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG---DALDVLSRLLDGS  132 (219)
T ss_pred             cCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC---cHHHHHHhccCCC
Confidence            45678887785  67778888888875  58999999999988875    478777432211 1   34455554 3458


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+||--.... ..+-++.++++|++||-+|.=
T Consensus       133 fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         133 FDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             ccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            99986444444 335589999999999987764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=94.63  E-value=0.18  Score=50.73  Aligned_cols=79  Identities=18%  Similarity=0.014  Sum_probs=48.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HH-HHHHhC---CCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GV-AKAYGL---GAD-YV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~-~~a~~L---GAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      ++|+|+|++|++|..+++.....|++|+++++++. .. +....+   +.. .+  .|..+.. ..+..+.+.+..+++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999998877778999999988743 11 122222   221 12  2333321 1122233333334799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12824         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99998874

>PLN00016 RNA-binding protein; Provisional

Probab=94.63  E-value=0.19  Score=55.00  Aligned_cols=97  Identities=12%  Similarity=0.002  Sum_probs=61.1

Q ss_pred             CCCEEEEE----cCCCchHHHHHHHHHHcCCeEEEEecChHHHHH-----------HHhCCCcEEEeCCccchhHHHHHH
Q psy14589        110 EPDTLFII----GANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK-----------AYGLGADYVVDHTIRELDRFANQI  174 (655)
Q Consensus       110 ~Gd~VLI~----GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-----------a~~LGAd~vId~~~~~~~d~~~~i  174 (655)
                      ...+|||+    ||+|-||..+++.+...|.+|+++++++.+...           +...|+..+.-  +  ..++.+.+
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~--D--~~d~~~~~  126 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWG--D--PADVKSKV  126 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEe--c--HHHHHhhh
Confidence            45689999    999999999998887889999999987654221           22345544321  1  11322222


Q ss_pred             HhcCCCeeEEEeCCCcchHHHHHHHHHHhcccc--ceEEEe
Q psy14589        175 LSYGSELDADHPGFTDPVYRARRKYFADLAFNY--KHFFFF  213 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gG--rlv~v~  213 (655)
                       . ..++|+|+++.|... ......+++++..|  ++|.++
T Consensus       127 -~-~~~~d~Vi~~~~~~~-~~~~~ll~aa~~~gvkr~V~~S  164 (378)
T PLN00016        127 -A-GAGFDVVYDNNGKDL-DEVEPVADWAKSPGLKQFLFCS  164 (378)
T ss_pred             -c-cCCccEEEeCCCCCH-HHHHHHHHHHHHcCCCEEEEEc
Confidence             1 237999999987652 12445566665444  555554

>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form

Probab=94.60  E-value=1  Score=51.58  Aligned_cols=72  Identities=11%  Similarity=0.137  Sum_probs=54.0

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccCCcEEEecC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      ....+.+++++ +||+|.++++.+..  -|++.++=|-.....  =..+|.++.  .+.+.++++.|+...-.+..+..
T Consensus       324 re~~l~V~iPe-rPGal~~f~~~i~~--~nItef~yr~~~~~~--a~v~vgie~~~~~~~~~l~~~L~~~Gy~~~dls~  397 (499)
T TIGR01124       324 REALLAVTIPE-QPGSFLKFCELLGN--RNITEFNYRYADRKD--AHIFVGVQLSNPQERQEILARLNDGGYSVVDLTD  397 (499)
T ss_pred             CEEEEEEEeCC-CCCHHHHHHHHhhh--cceEEEEEEecCCCe--EEEEEEEEeCCHHHHHHHHHHHHHcCCCeEECCC
Confidence            36778889998 99999999999986  588888877544333  334555554  57888999999887766666644

Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.

>PLN02686 cinnamoyl-CoA reductase

Probab=94.60  E-value=0.17  Score=55.22  Aligned_cols=45  Identities=20%  Similarity=0.112  Sum_probs=37.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG  153 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~  153 (655)
                      ..+++|||+||+|.||..+++.....|++|++++++.++.+.+++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~   95 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLRE   95 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            478899999999999999999888889999888777665544443

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.59  E-value=0.073  Score=55.30  Aligned_cols=102  Identities=20%  Similarity=0.124  Sum_probs=65.4

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHH-HHH-h
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFAN-QIL-S  176 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~-~i~-~  176 (655)
                      .++ .+|++|+=.|.  |-|.+...+|++.|-  +|+..+..+++.+.|+    ..|.+..+.-...   |+.+ ... +
T Consensus        36 l~i-~pG~~VlEaGt--GSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~---Dv~~~g~~~~  109 (247)
T PF08704_consen   36 LDI-RPGSRVLEAGT--GSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR---DVCEEGFDEE  109 (247)
T ss_dssp             TT---TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES----GGCG--STT
T ss_pred             cCC-CCCCEEEEecC--CcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec---ceeccccccc
Confidence            456 79999998775  677899999999874  9999999998887774    4565432221111   2211 111 1


Q ss_pred             cCCCeeEEEeCCCcchHHHHHHHHHHh-ccccceEEEe
Q psy14589        177 YGSELDADHPGFTDPVYRARRKYFADL-AFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~~~~~l~~~l~~l-~~gGrlv~v~  213 (655)
                      ....+|.||=-+..+ |+.+..+.++| ++||++..+.
T Consensus       110 ~~~~~DavfLDlp~P-w~~i~~~~~~L~~~gG~i~~fs  146 (247)
T PF08704_consen  110 LESDFDAVFLDLPDP-WEAIPHAKRALKKPGGRICCFS  146 (247)
T ss_dssp             -TTSEEEEEEESSSG-GGGHHHHHHHE-EEEEEEEEEE
T ss_pred             ccCcccEEEEeCCCH-HHHHHHHHHHHhcCCceEEEEC
Confidence            123789987666666 23489999999 8999998864

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08198 threonine dehydratase; Provisional

Probab=94.57  E-value=0.8  Score=50.85  Aligned_cols=72  Identities=14%  Similarity=0.229  Sum_probs=53.4

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeeccc-CCC-CCcceEEEEEecC--CchHHHHHHHHHccCCcEEE
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRS-STR-IENNYEFMVECAP--GGDLSSVIESLRSSCSYINI  333 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP-~~~-~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~~v~i  333 (655)
                      ..++.+.+++ +||+|.++++.+++.+.|+..|.-.. ..+ ..+.-.+.|.+|.  .+.++++++.|++..-.+++
T Consensus       327 ~~~l~v~l~D-~PG~L~~ll~~i~~~g~NI~~i~~~~~~~~~~~~~~~v~v~ie~~~~~~~~~l~~~L~~~G~~v~~  402 (404)
T PRK08198        327 YLKLRVRLPD-RPGQLAKLLSIIAELGANVIDVDHDRFSPDLRLGEVEVELTLETRGPEHIEEILDALRDAGYEVKV  402 (404)
T ss_pred             EEEEEEEeCC-CCCHHHHHHHHHhhCCCceEEEEEEEccCCCCCceEEEEEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence            5688888998 99999999999999999998886543 322 2345556666665  34678899999877555544

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=94.52  E-value=0.19  Score=52.01  Aligned_cols=102  Identities=17%  Similarity=0.148  Sum_probs=68.4

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ..... ++|++||=.|+  |.|-+++.+++..|- +|+++|.|++-++.+++    .|... +.+...   | ++.+. .
T Consensus        45 ~~~~~-~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~---d-Ae~LP-f  115 (238)
T COG2226          45 SLLGI-KPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG---D-AENLP-F  115 (238)
T ss_pred             HhhCC-CCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe---c-hhhCC-C
Confidence            33444 58999995554  788899999999874 89999999987777653    34332 222221   1 11111 1


Q ss_pred             -CCCeeEEEeCCCcc----hHHHHHHHHHHhccccceEEEe
Q psy14589        178 -GSELDADHPGFTDP----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 -~~gvDvV~D~vG~~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       .+.+|+|.-+.|=.    ...++.++.+.|+|||+++..-
T Consensus       116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle  156 (238)
T COG2226         116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLE  156 (238)
T ss_pred             CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEE
Confidence             22688887665543    2356899999999999998874

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=94.49  E-value=0.17  Score=50.52  Aligned_cols=77  Identities=21%  Similarity=0.161  Sum_probs=48.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHH----HHHHhCCCcE---EEeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGV----AKAYGLGADY---VVDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~----~~a~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      |+|+|++|++|..+++.....|++|++++++. ++.    +.+.+.|+..   ..|..+.. .+.+.+.+.+.-+++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999988877899999988764 222    2234455421   23444321 011222233222478999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998885

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>cd04887 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI and related domains

Probab=94.47  E-value=0.13  Score=42.34  Aligned_cols=65  Identities=9%  Similarity=0.109  Sum_probs=47.6

Q ss_pred             EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC
Q psy14589        264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS  329 (655)
Q Consensus       264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~  329 (655)
                      +.+...+ ++|.|+++.+.+++.|+|+..++++..........|-+++...+.+.++++.|++.-.
T Consensus         2 l~v~~~d-~~g~L~~i~~~i~~~~~nI~~v~~~~~~~~~~~~~~~vev~~~~~l~~i~~~L~~i~g   66 (74)
T cd04887           2 LRLELPN-RPGMLGRVTTAIGEAGGDIGAIDLVEQGRDYTVRDITVDAPSEEHAETIVAAVRALPE   66 (74)
T ss_pred             EEEEeCC-CCchHHHHHHHHHHcCCcEEEEEEEEecCCEEEEEEEEEcCCHHHHHHHHHHHhcCCC
Confidence            4455666 8999999999999999999999987644333333444444446788889999887643

The ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI, a malolactic enzyme (MalLac-Enz) which converts malate to lactate, and other related ACT domains. The yqkJ product is predicted to convert malate directly to lactate, as opposed to related malic enzymes that convert malate to pyruvate. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK12827 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.26  Score=49.51  Aligned_cols=79  Identities=15%  Similarity=-0.048  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec----ChHHHHHH----HhCCCcE-E--EeCCccchhHHHH---HHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG----CPVGVAKA----YGLGADY-V--VDHTIRELDRFAN---QIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~----s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~---~i~  175 (655)
                      .+.+++|+||+|++|...++.....|++|+++++    ++++.+.+    ...|... +  .|..+.  +++.+   .+.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~   82 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDF--AATRAALDAGV   82 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHH
Confidence            5678999999999999988877788999988654    23333222    2334332 2  233332  12222   222


Q ss_pred             hcCCCeeEEEeCCCc
Q psy14589        176 SYGSELDADHPGFTD  190 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~  190 (655)
                      +..+++|.++.++|.
T Consensus        83 ~~~~~~d~vi~~ag~   97 (249)
T PRK12827         83 EEFGRLDILVNNAGI   97 (249)
T ss_pred             HHhCCCCEEEECCCC
Confidence            222478999998874

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=94.46  E-value=0.15  Score=54.63  Aligned_cols=77  Identities=12%  Similarity=0.007  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-----HHHHHh----CCC--cEE-EeCCccchhHHHHHHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-----VAKAYG----LGA--DYV-VDHTIRELDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-----~~~a~~----LGA--d~v-Id~~~~~~~d~~~~i~~~  177 (655)
                      +|.+|||+||+|.||..+++.....|.+|+++++++++     ++.+..    .+.  ..+ .|..+.  +++.+.+.+.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~   82 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDA--SSLRRWLDDI   82 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCH--HHHHHHHHHc
Confidence            67899999999999999999888889999998875432     222211    111  111 344332  2333434332


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                        ++|+|+.+++.
T Consensus        83 --~~d~Vih~A~~   93 (340)
T PLN02653         83 --KPDEVYNLAAQ   93 (340)
T ss_pred             --CCCEEEECCcc
Confidence              47999998874

>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB

Probab=94.46  E-value=0.22  Score=40.69  Aligned_cols=63  Identities=22%  Similarity=0.297  Sum_probs=44.6

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      .+.+.+++ +||.|.++++.++++++|+..+...+... .......+.+++ ....++++.|++..
T Consensus         3 ~~~v~~~d-~pG~l~~i~~~l~~~~inI~~i~~~~~~~-~~~~~v~i~v~~-~~~~~~~~~L~~~G   65 (72)
T cd04883           3 QIEVRVPD-RPGQLADIAAIFKDRGVNIVSVLVYPSKE-EDNKILVFRVQT-MNPRPIIEDLRRAG   65 (72)
T ss_pred             EEEEEECC-CCCHHHHHHHHHHHcCCCEEEEEEeccCC-CCeEEEEEEEec-CCHHHHHHHHHHCC
Confidence            45667777 89999999999999999999987655432 344556666665 11236677776653

This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK07023 short chain dehydrogenase; Provisional

Probab=94.45  E-value=0.21  Score=50.57  Aligned_cols=76  Identities=14%  Similarity=0.035  Sum_probs=47.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE---EEeCCccchhHHHHHHHh-----cC--CCe
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY---VVDHTIRELDRFANQILS-----YG--SEL  181 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~---vId~~~~~~~d~~~~i~~-----~~--~gv  181 (655)
                      .+++|+||+|+||..+++.....|++|++++++.++. .....|...   ..|..+.  +++.+.+.+     ..  +++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~   78 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAAAAGERLAEVELDLSDA--AAAAAWLAGDLLAAFVDGASR   78 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhhccCCeEEEEEeccCCH--HHHHHHHHHHHHHHhccCCCc
Confidence            3699999999999999988777899999998876542 223334321   1344432  233332221     11  267


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.+.|.
T Consensus        79 ~~~v~~ag~   87 (243)
T PRK07023         79 VLLINNAGT   87 (243)
T ss_pred             eEEEEcCcc
Confidence            888887764

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=94.44  E-value=0.16  Score=54.07  Aligned_cols=93  Identities=12%  Similarity=0.012  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCC-
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGF-  188 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~v-  188 (655)
                      +-+|.|.|+ |-+|.-+..+|--+||+|...+.+.+|+..+..+=..++ .-+++.  .++.+.+.    +.|+++.++ 
T Consensus       168 ~~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~--~~iee~v~----~aDlvIgaVL  240 (371)
T COG0686         168 PAKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP--SNIEEAVK----KADLVIGAVL  240 (371)
T ss_pred             CccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH--HHHHHHhh----hccEEEEEEE
Confidence            345888898 999999999999999999999999999888865433332 223332  35555555    468877654 


Q ss_pred             --Ccc----hHHHHHHHHHHhccccceEEEe
Q psy14589        189 --TDP----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 --G~~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        |..    .   .++.++.|++|+.+|=|.
T Consensus       241 IpgakaPkLv---t~e~vk~MkpGsVivDVA  268 (371)
T COG0686         241 IPGAKAPKLV---TREMVKQMKPGSVIVDVA  268 (371)
T ss_pred             ecCCCCceeh---hHHHHHhcCCCcEEEEEE
Confidence              333    4   578899999999998883

>PRK01581 speE spermidine synthase; Validated

Probab=94.41  E-value=0.34  Score=53.11  Aligned_cols=98  Identities=21%  Similarity=0.108  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhC--------CC---cEEEeCCccchhHHHHHHHh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGL--------GA---DYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~L--------GA---d~vId~~~~~~~d~~~~i~~  176 (655)
                      ...++|||.|+  |.|..+..+++.-+ .+|++++.+++-.+.+++.        |+   .++ ....   .|..+.+.+
T Consensus       149 ~~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi---~Da~~fL~~  222 (374)
T PRK01581        149 IDPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHV---CDAKEFLSS  222 (374)
T ss_pred             CCCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEE---CcHHHHHHh
Confidence            35679999996  56667777787655 4899999999888888852        11   111 1111   144555555


Q ss_pred             cCCCeeEEEeCCCcc---------hHHHHHHHHHHhccccceEEE
Q psy14589        177 YGSELDADHPGFTDP---------VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~---------~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..+.+|+|+--...+         +-+-++.+.+.|++||.++.-
T Consensus       223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Q  267 (374)
T PRK01581        223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQ  267 (374)
T ss_pred             cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            445799986443211         112367888899999998765

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.36  E-value=0.15  Score=51.22  Aligned_cols=74  Identities=16%  Similarity=0.068  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+++|+|++|+||...+......|++|+++++++.+..   .-.. ..+...-.   +..+.+.+..+++|+++.+.|
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~-~~~~~D~~---~~~~~~~~~~~~id~lv~~ag   76 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNF-HFLQLDLS---DDLEPLFDWVPSVDILCNTAG   76 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcE-EEEECChH---HHHHHHHHhhCCCCEEEECCC
Confidence            5789999999999999999877778999999887653311   1011 11211111   112333333347899999887


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        77 ~   77 (235)
T PRK06550         77 I   77 (235)
T ss_pred             C
Confidence            3

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.34  E-value=0.075  Score=60.15  Aligned_cols=79  Identities=18%  Similarity=0.210  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh---------------------HHHHHHHhCCCcEEEeCCccch
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP---------------------VGVAKAYGLGADYVVDHTIREL  167 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~---------------------~k~~~a~~LGAd~vId~~~~~~  167 (655)
                      +.|++|+|.|+ |+.|+.++..++..|.+|+..+..+                     ...+.++++|++..++..-.. 
T Consensus       139 ~~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~-  216 (467)
T TIGR01318       139 PTGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR-  216 (467)
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence            36899999999 9999999999999999988877553                     235667889988766543210 


Q ss_pred             hHHHHHHHhcCCCeeEEEeCCCcch
Q psy14589        168 DRFANQILSYGSELDADHPGFTDPV  192 (655)
Q Consensus       168 ~d~~~~i~~~~~gvDvV~D~vG~~~  192 (655)
                       ++  .+.+...++|.|+.++|...
T Consensus       217 -~~--~~~~~~~~~D~vilAtGa~~  238 (467)
T TIGR01318       217 -DI--SLDDLLEDYDAVFLGVGTYR  238 (467)
T ss_pred             -cc--CHHHHHhcCCEEEEEeCCCC
Confidence             11  01111126899999999863

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=94.31  E-value=0.3  Score=50.26  Aligned_cols=99  Identities=11%  Similarity=0.004  Sum_probs=63.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc-----
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY-----  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~-----  177 (655)
                      ..+++||-.|.  +.|..++.+|+++  +.+|++++.+++..+.++    +.|.+.-|.....   +..+.+.+.     
T Consensus        67 ~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g---da~~~L~~l~~~~~  141 (234)
T PLN02781         67 MNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS---DALSALDQLLNNDP  141 (234)
T ss_pred             hCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc---cHHHHHHHHHhCCC
Confidence            46778998886  5566666677765  359999999998877764    3565433332222   233333322     


Q ss_pred             CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        178 GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+|+|+-....+ ..+.++.+++.+++||.++.-
T Consensus       142 ~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d  177 (234)
T PLN02781        142 KPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD  177 (234)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            23799987544333 224478899999999987764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=94.31  E-value=0.26  Score=54.16  Aligned_cols=88  Identities=14%  Similarity=0.050  Sum_probs=52.8

Q ss_pred             EEEEcCCCchHHHHHHHHHHcC-C-eEEEEecChHHHHHHHh--CC--Cc-EEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYG-L-TVFASVGCPVGVAKAYG--LG--AD-YVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~G-a-~Viat~~s~~k~~~a~~--LG--Ad-~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      |+|.|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+  .+  .. ..+|..+.  ++    +.+.-.+.|+|++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~----l~~~~~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP--ES----LAELLRGCDVVIN   73 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH--HH----HHHHHTTSSEEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH--HH----HHHHHhcCCEEEE
Confidence            789999 999999999877765 4 89999999999777653  22  11 22344332  12    3333235699999


Q ss_pred             CCCcchHHHHHHHHHH-hccccceEE
Q psy14589        187 GFTDPVYRARRKYFAD-LAFNYKHFF  211 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~-l~~gGrlv~  211 (655)
                      |+|...   ....+++ ++.|-..|-
T Consensus        74 ~~gp~~---~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   74 CAGPFF---GEPVARACIEAGVHYVD   96 (386)
T ss_dssp             -SSGGG---HHHHHHHHHHHT-EEEE
T ss_pred             CCccch---hHHHHHHHHHhCCCeec
Confidence            999874   3444444 444444444

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.28  E-value=0.38  Score=49.71  Aligned_cols=93  Identities=15%  Similarity=0.052  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .++++||=.|+  |.|..+..+++.. +++|++++.++.-.+.+++.+.+.+. .      +..+ +. ..+.+|+|+-.
T Consensus        28 ~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~------d~~~-~~-~~~~fD~v~~~   96 (255)
T PRK14103         28 ERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-G------DVRD-WK-PKPDTDVVVSN   96 (255)
T ss_pred             CCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-c------Chhh-CC-CCCCceEEEEe
Confidence            57899998887  4467788888875 67999999999888888877655332 1      2211 11 12368998864


Q ss_pred             CCc----chHHHHHHHHHHhccccceEEE
Q psy14589        188 FTD----PVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       188 vG~----~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..-    +..+.+....+.|++||++++.
T Consensus        97 ~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         97 AALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             hhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            421    1123477888999999998875

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.28  E-value=0.12  Score=54.67  Aligned_cols=38  Identities=24%  Similarity=0.155  Sum_probs=33.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG  147 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k  147 (655)
                      .|.+|||+||+|.||..++......|.+|++++++.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            57899999999999999998888889999988877544

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.25  E-value=0.8  Score=46.10  Aligned_cols=90  Identities=11%  Similarity=-0.045  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|.+|+|.|+ |.+|...++.....|++|++++.... .+..+.+.|.-... ...     +...-   -.++|+|+-++
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~-~~~-----~~~~~---l~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWK-QKE-----FEPSD---IVDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEE-ecC-----CChhh---cCCceEEEEcC
Confidence            7889999999 99999888877778999887765321 22222222322221 111     11110   12689999999


Q ss_pred             CcchHHHHHHHHHHhccccceEEE
Q psy14589        189 TDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       189 G~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+.   ++..+...+..+.++-+
T Consensus        79 ~d~e---lN~~i~~~a~~~~lvn~   99 (202)
T PRK06718         79 NDPR---VNEQVKEDLPENALFNV   99 (202)
T ss_pred             CCHH---HHHHHHHHHHhCCcEEE
Confidence            9886   66666655555666554

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.25  E-value=0.43  Score=51.65  Aligned_cols=88  Identities=23%  Similarity=0.152  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||.+.++.+|..|++|+..++++. .+..+..++..+         ++.+.+.    ..|++.-.++
T Consensus       145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~---------~l~ell~----~sDii~l~~P  209 (324)
T COG1052         145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYV---------DLDELLA----ESDIISLHCP  209 (324)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceec---------cHHHHHH----hCCEEEEeCC
Confidence            6999999999 99999999999999999999988765 334455555543         1222233    2477655443


Q ss_pred             c-c-hHHHH-HHHHHHhccccceEEE
Q psy14589        190 D-P-VYRAR-RKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~-~-~~~~l-~~~l~~l~~gGrlv~v  212 (655)
                      . + ++..+ ...++.|++|+.+|=+
T Consensus       210 lt~~T~hLin~~~l~~mk~ga~lVNt  235 (324)
T COG1052         210 LTPETRHLINAEELAKMKPGAILVNT  235 (324)
T ss_pred             CChHHhhhcCHHHHHhCCCCeEEEEC
Confidence            3 3 22222 4667788887766654

>PLN02476 O-methyltransferase

Probab=94.22  E-value=0.3  Score=51.69  Aligned_cols=102  Identities=10%  Similarity=-0.032  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc--CCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY--GSE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~--~~g  180 (655)
                      ..+++||=.|.  ++|..++.+|+.+  +.+|++++.+++..+.++    +.|..+-|+....+..+....+.+.  .+.
T Consensus       117 ~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~  194 (278)
T PLN02476        117 LGAERCIEVGV--YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS  194 (278)
T ss_pred             cCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence            46789998886  6777788888887  458999999998877774    4676543433322111222222211  237


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|.||--.... ..+-++.+++.|++||.+|.=
T Consensus       195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            99986444443 335588999999999987763

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.19  E-value=4.7  Score=45.08  Aligned_cols=35  Identities=20%  Similarity=0.140  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      .|.+|.|.|. |.||...++.++.+|.+|++.++.+
T Consensus       150 ~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~  184 (409)
T PRK11790        150 RGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIED  184 (409)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCc
Confidence            7889999999 9999999999999999999988653

>COG4492 PheB ACT domain-containing protein [General function prediction only]

Probab=94.18  E-value=0.21  Score=46.58  Aligned_cols=75  Identities=20%  Similarity=0.342  Sum_probs=62.4

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeee-ecccCCCCCcceEEEEEecC-CchHHHHHHHHHcc--CCcEEEec
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHI-ESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSS--CSYINIIS  335 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~I-eSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~--~~~v~iLG  335 (655)
                      ...++.+.+.+ +.|.|+++|..+++.++|+..| ++-|..+.. +-...+|..+ +..+.+++++|++.  -..+.++|
T Consensus        71 ri~TL~l~led-r~G~LS~vLd~iA~~~~nvLTI~Q~ipl~g~A-nvtlsi~~ssm~~~V~~ii~kl~k~e~V~kVeivg  148 (150)
T COG4492          71 RIITLSLSLED-RVGILSDVLDVIAREEINVLTIHQTIPLQGRA-NVTLSIDTSSMEKDVDKIIEKLRKVEGVEKVEIVG  148 (150)
T ss_pred             eEEEEEEEEhh-hhhhHHHHHHHHHHhCCcEEEEecccccCcee-eEEEEEEchhhhhhHHHHHHHHhcccceeEEEEee
Confidence            47889999999 9999999999999999998777 678877655 4667778877 88999999999976  35677777


Q ss_pred             C
Q psy14589        336 R  336 (655)
Q Consensus       336 s  336 (655)
                      +
T Consensus       149 s  149 (150)
T COG4492         149 S  149 (150)
T ss_pred             c
Confidence            6

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=94.18  E-value=0.24  Score=53.00  Aligned_cols=75  Identities=12%  Similarity=-0.009  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH-hCCCc--EE--EeCCccchhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY-GLGAD--YV--VDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~-~LGAd--~v--Id~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .|.+|+|+||+|+||..+++.....|  .+|+++++++.+...+. .+...  .+  .|..+.  +++.+.+.    ++|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~l~~~~~----~iD   76 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK--ERLTRALR----GVD   76 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH--HHHHHHHh----cCC
Confidence            47899999999999999988666665  68988887765543332 23211  12  243332  22333332    589


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +|+.++|.
T Consensus        77 ~Vih~Ag~   84 (324)
T TIGR03589        77 YVVHAAAL   84 (324)
T ss_pred             EEEECccc
Confidence            99998874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=94.17  E-value=0.27  Score=49.88  Aligned_cols=81  Identities=12%  Similarity=0.001  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCC------CcEE--EeCCc-cc-hhHHHHHHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLG------ADYV--VDHTI-RE-LDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LG------Ad~v--Id~~~-~~-~~d~~~~i~~~  177 (655)
                      .+++++|+|+++|+|..++.-....|++|+++.++.++  .+.+.+..      ....  .|.++ .. ...+.+.+.+.
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            67899999999999998887666889998777766443  23332211      1111  45443 21 11233334443


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus        84 ~g~id~lvnnAg~   96 (251)
T COG1028          84 FGRIDILVNNAGI   96 (251)
T ss_pred             cCCCCEEEECCCC
Confidence            4579999998885

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=94.17  E-value=0.097  Score=55.10  Aligned_cols=72  Identities=18%  Similarity=0.087  Sum_probs=49.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +|+|+|++|.+|..+++.....|.+|+++++++++.......+...+ .|..+.  +++.+.+    .++|+|+.+++.
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~--~~l~~~~----~~~d~vi~~a~~   74 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDP--ASLRKAV----AGCRALFHVAAD   74 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCH--HHHHHHH----hCCCEEEEecee
Confidence            69999999999999999888889999999987765443444454433 233332  1233323    257999988753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK04435 hypothetical protein; Provisional

Probab=94.15  E-value=0.29  Score=46.82  Aligned_cols=76  Identities=18%  Similarity=0.280  Sum_probs=57.6

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccC--CcEEEecC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSC--SYINIISR  336 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~--~~v~iLGs  336 (655)
                      .++++.+.+.+ ++|.|+++++.+++.++|+..|...-.........|-|+... ...+.+++++|++.-  ..++++|.
T Consensus        68 r~vtL~i~l~D-r~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVevs~~~~~L~~Li~~L~~i~gV~~V~i~~~  146 (147)
T PRK04435         68 KIITLSLLLED-RSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDTSSMEGDIDELLEKLRNLDGVEKVELIGM  146 (147)
T ss_pred             cEEEEEEEEec-CCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEeCChHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            46788888888 899999999999999999999975322222345666666655 458999999999874  45777764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.12  E-value=0.28  Score=50.05  Aligned_cols=35  Identities=23%  Similarity=0.288  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGC  144 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s  144 (655)
                      .|.+|+|+||+  ||+|...+......|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            57889999998  489998887776789999998876

>KOG1502|consensus

Probab=94.07  E-value=0.19  Score=54.03  Aligned_cols=74  Identities=20%  Similarity=0.112  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH---HHHhCC-CcE---EE--eCCccchhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA---KAYGLG-ADY---VV--DHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~---~a~~LG-Ad~---vI--d~~~~~~~d~~~~i~~~~~g  180 (655)
                      .+.+|+|+||+|=||+..+...-.+|.+|.+++|++++.+   .++++. +..   ++  |-.+.  +.+.+.+.    |
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~--~sf~~ai~----g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDE--GSFDKAID----G   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEecccccc--chHHHHHh----C
Confidence            6789999999999999999999999999999999987633   366653 321   11  11111  23444443    7


Q ss_pred             eeEEEeCCC
Q psy14589        181 LDADHPGFT  189 (655)
Q Consensus       181 vDvV~D~vG  189 (655)
                      +|.||-++.
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            888886553

>PRK00811 spermidine synthase; Provisional

Probab=94.06  E-value=0.31  Score=51.64  Aligned_cols=99  Identities=20%  Similarity=0.100  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhC------CC--cEEEeCCccchhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGL------GA--DYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~L------GA--d~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      +++++||+.|+  |.|..+..+++..+. +|.+++.+++-.+.+++.      |+  +.=+.....   |..+.+.+..+
T Consensus        75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~---Da~~~l~~~~~  149 (283)
T PRK00811         75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG---DGIKFVAETEN  149 (283)
T ss_pred             CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC---chHHHHhhCCC
Confidence            46789999997  557778888887665 899999999888777652      11  100111111   34444544344


Q ss_pred             CeeEEEeCCCcc--------hHHHHHHHHHHhccccceEEE
Q psy14589        180 ELDADHPGFTDP--------VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       180 gvDvV~D~vG~~--------~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+|+|+-....+        +.+-++.+.+.|++||.++.-
T Consensus       150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            799987533111        112256788899999988764

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.06  E-value=0.2  Score=52.75  Aligned_cols=74  Identities=14%  Similarity=0.080  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .+.+|+|.|+ ||+|.+++..++..| .+|+++.++.++.+.+. .++....+....    +..+.    -.++|+|++|
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~----~~~~DivIna  192 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQEE----LADFDLIINA  192 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhc----cccCCEEEEC
Confidence            6789999998 999999999999999 58999999988876653 343211011100    11111    1258999999


Q ss_pred             CCcch
Q psy14589        188 FTDPV  192 (655)
Q Consensus       188 vG~~~  192 (655)
                      ++...
T Consensus       193 Tp~g~  197 (278)
T PRK00258        193 TSAGM  197 (278)
T ss_pred             CcCCC
Confidence            87553

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.06  E-value=0.24  Score=48.92  Aligned_cols=95  Identities=16%  Similarity=0.103  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++|+=.|+  |.|..++.+|+.. +++|++++.+++..+.+    ++.|.+.+ .....   +..+ + ...+.+|+|
T Consensus        42 ~~~~vLDiGc--GtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~---d~~~-~-~~~~~fD~I  113 (181)
T TIGR00138        42 DGKKVIDIGS--GAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNG---RAED-F-QHEEQFDVI  113 (181)
T ss_pred             CCCeEEEecC--CCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEec---chhh-c-cccCCccEE
Confidence            4889998887  4455666667665 46899999998765554    34565432 22111   2222 1 112368988


Q ss_pred             EeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        185 HPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       185 ~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +-..-....+.++.+.+.|++||+++..
T Consensus       114 ~s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       114 TSRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             EehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            7543222223367778899999998864

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=93.98  E-value=0.099  Score=61.52  Aligned_cols=77  Identities=22%  Similarity=0.225  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH---------------------HHHHHHhCCCcEEEeCCccchh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV---------------------GVAKAYGLGADYVVDHTIRELD  168 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~---------------------k~~~a~~LGAd~vId~~~~~~~  168 (655)
                      .|++|+|.|+ |+.|+.+++.++.+|.+|++.++.+.                     ..+.++++|++..++..-...-
T Consensus       309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            5899999999 99999999999999999988876642                     4566788998877665321100


Q ss_pred             HHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        169 RFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       169 d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      ++.    +...++|.|+.++|..
T Consensus       388 ~~~----~l~~~~DaV~latGa~  406 (639)
T PRK12809        388 TFS----DLTSEYDAVFIGVGTY  406 (639)
T ss_pred             CHH----HHHhcCCEEEEeCCCC
Confidence            121    1223689999999976

>PLN02427 UDP-apiose/xylose synthase

Probab=93.97  E-value=0.27  Score=53.83  Aligned_cols=74  Identities=15%  Similarity=-0.036  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCC------cEEE--eCCccchhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGA------DYVV--DHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGA------d~vI--d~~~~~~~d~~~~i~~~~~g  180 (655)
                      +..+|||+||+|-||..+++.+... |.+|++++++.++.+.+...+.      -.++  |..+.  +++.+.+    .+
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~--~~l~~~~----~~   86 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHD--SRLEGLI----KM   86 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCCh--HHHHHHh----hc
Confidence            5678999999999999999877777 5899999887766655544331      1222  22221  1222222    25


Q ss_pred             eeEEEeCCC
Q psy14589        181 LDADHPGFT  189 (655)
Q Consensus       181 vDvV~D~vG  189 (655)
                      +|+|+.+++
T Consensus        87 ~d~ViHlAa   95 (386)
T PLN02427         87 ADLTINLAA   95 (386)
T ss_pred             CCEEEEccc
Confidence            899999886

>PLN02244 tocopherol O-methyltransferase

Probab=93.96  E-value=0.15  Score=55.42  Aligned_cols=99  Identities=16%  Similarity=0.107  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      +++++||=.|+  |.|..+..+++..|++|++++.++...+.+++    .|...-+.....   |..+ +.-..+.+|+|
T Consensus       117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~---D~~~-~~~~~~~FD~V  190 (340)
T PLN02244        117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA---DALN-QPFEDGQFDLV  190 (340)
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc---Cccc-CCCCCCCccEE
Confidence            47889998887  66778888999889999999999887666543    343211111111   1111 00012368998


Q ss_pred             EeCCCcc----hHHHHHHHHHHhccccceEEEe
Q psy14589        185 HPGFTDP----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       185 ~D~vG~~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +-.-...    ..+.+..+.++|++||+++++.
T Consensus       191 ~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~  223 (340)
T PLN02244        191 WSMESGEHMPDKRKFVQELARVAAPGGRIIIVT  223 (340)
T ss_pred             EECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            7533221    1134788899999999999864

>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form

Probab=93.96  E-value=1.7  Score=47.71  Aligned_cols=68  Identities=15%  Similarity=0.079  Sum_probs=49.6

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecc-cCCC-CCcceEEEEEecC--CchHHHHHHHHHccCC
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESR-SSTR-IENNYEFMVECAP--GGDLSSVIESLRSSCS  329 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSR-P~~~-~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~  329 (655)
                      ...+.+.+++ +||.|+++++.+++.+.|++.|.-+ ..+. ........|.+|.  .+..+++++.|++..-
T Consensus       305 ~~~l~v~l~D-~pG~L~~v~~~i~~~~~NI~~i~~~r~~~~~~~~~~~v~v~vet~~~~~~~~i~~~L~~~G~  376 (380)
T TIGR01127       305 KVRIETVLPD-RPGALYHLLESIAEARANIVKIDHDRLSKEIPPGFAMVEITLETRGKEHLDEILKILRDMGY  376 (380)
T ss_pred             EEEEEEEeCC-CCCHHHHHHHHHhcCCCcEEEEEeeccccCCCCceEEEEEEEEeCCHHHHHHHHHHHHHcCC
Confidence            4578888888 9999999999999999999988654 2222 1234455566655  4666788888887643

A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=93.91  E-value=0.87  Score=40.76  Aligned_cols=93  Identities=17%  Similarity=0.042  Sum_probs=61.3

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcch
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPV  192 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~  192 (655)
                      |+|.|. |.+|..+++..+..+.+|++++.++++.+.+++.|.. ++.-...   + .+.+++.+ ..++.++-+++.+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~---~-~~~l~~a~i~~a~~vv~~~~~d~   74 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDAT---D-PEVLERAGIEKADAVVILTDDDE   74 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TT---S-HHHHHHTTGGCESEEEEESSSHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccch---h-hhHHhhcCccccCEEEEccCCHH
Confidence            678899 9999999999888677999999999999999999955 4532221   1 22333332 27888888887763


Q ss_pred             -HHHHHHHHHHhccccceEEE
Q psy14589        193 -YRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       193 -~~~l~~~l~~l~~gGrlv~v  212 (655)
                       +-.....++.+.+..+++..
T Consensus        75 ~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   75 ENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHCCCCeEEEE
Confidence             11122344445556666664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd02116 ACT ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme

Probab=93.89  E-value=0.23  Score=36.47  Aligned_cols=57  Identities=28%  Similarity=0.465  Sum_probs=42.7

Q ss_pred             EEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHH
Q psy14589        266 FSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESL  324 (655)
Q Consensus       266 f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L  324 (655)
                      +..++ .+|.+.++++.+++.++++..+.+.+... .+...+++.++.......++++|
T Consensus         3 i~~~~-~~~~l~~i~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l   59 (60)
T cd02116           3 VSGPD-RPGLLAKVLSVLAEAGINITSIEQRTSGD-GGEADIFIVVDGDGDLEKLLEAL   59 (60)
T ss_pred             EEecC-CCchHHHHHHHHHHCCCcEEEEEeEEcCC-CCeEEEEEEEechHHHHHHHHHh
Confidence            44556 78999999999999999999998876543 55667777776522566666655

Members of this CD belong to the superfamily of ACT regulatory domains. Pairs of ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme. The ACT domain has been detected in a number of diverse proteins; some of these proteins are involved in amino acid and purine biosynthesis, phenylalanine hydroxylation, regulation of bacterial metabolism and transcription, and many remain to be characterized. ACT domain-containing enzymes involved in amino acid and purine synthesis are in many cases allosteric enzymes with complex regulation enforced by the binding of ligands. The ACT domain is commonly involved in the binding of a small regulatory molecule, such as the amino acids L-Ser and L-Phe in the case of D-3-phosphoglycerate dehydrogenase and the bifunctional chorismate mutase-p

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=93.82  E-value=0.43  Score=50.59  Aligned_cols=70  Identities=17%  Similarity=0.130  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH-hCC----CcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY-GLG----ADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~-~LG----Ad~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .+.+|+|.|+ ||+|.+++..+...|+ +|+.++++.+|.+.+. .++    ...+....     ++.+.+    ..+|+
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~-----~~~~~~----~~aDi  195 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS-----DLAAAL----AAADG  195 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc-----chHhhh----CCCCE
Confidence            6789999999 9999999999989998 7999999988776653 232    12222211     222222    25899


Q ss_pred             EEeCCC
Q psy14589        184 DHPGFT  189 (655)
Q Consensus       184 V~D~vG  189 (655)
                      |++|+.
T Consensus       196 VInaTp  201 (284)
T PRK12549        196 LVHATP  201 (284)
T ss_pred             EEECCc
Confidence            999964

>TIGR00477 tehB tellurite resistance protein TehB

Probab=93.81  E-value=0.12  Score=51.40  Aligned_cols=93  Identities=13%  Similarity=0.080  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      ++.+||-.|+  |.|..++.+|+ .|.+|++++.+++-++.+++    .|..  +.....   +....  ...+.+|+|+
T Consensus        30 ~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~---d~~~~--~~~~~fD~I~   99 (195)
T TIGR00477        30 APCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY---DINAA--ALNEDYDFIF   99 (195)
T ss_pred             CCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec---cchhc--cccCCCCEEE
Confidence            4668999897  77888888887 58899999999876665532    3332  111111   11110  1123689887


Q ss_pred             eCC-----Ccc-hHHHHHHHHHHhccccceEEE
Q psy14589        186 PGF-----TDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       186 D~v-----G~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ...     ..+ ....++.+.+.|++||+++++
T Consensus       100 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~  132 (195)
T TIGR00477       100 STVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV  132 (195)
T ss_pred             EecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            542     111 113467888899999996655

Part of a tellurite-reducing operon tehA and tehB

>PF13291 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A

Probab=93.79  E-value=0.26  Score=41.60  Aligned_cols=67  Identities=16%  Similarity=0.208  Sum_probs=49.4

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccCC
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSCS  329 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~  329 (655)
                      .+.+.+...+ ++|-|+++.+.+++.++|+..++....+. .+.....++++.  .+.+..+++.|++...
T Consensus         6 ~~~l~i~~~d-r~GlL~dI~~~i~~~~~nI~~i~~~~~~~-~~~~~~~l~v~V~d~~~L~~ii~~L~~i~~   74 (80)
T PF13291_consen    6 PVRLRIEAED-RPGLLADITSVISENGVNIRSINARTNKD-DGTARITLTVEVKDLEHLNQIIRKLRQIPG   74 (80)
T ss_dssp             EEEEEEEEE---TTHHHHHHHHHHCSSSEEEEEEEEE--E-TTEEEEEEEEEESSHHHHHHHHHHHCTSTT
T ss_pred             EEEEEEEEEc-CCCHHHHHHHHHHHCCCCeEEEEeEEecc-CCEEEEEEEEEECCHHHHHHHHHHHHCCCC
Confidence            4667777777 89999999999999999999999988652 334445555544  6789999999987654

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=93.76  E-value=0.046  Score=56.53  Aligned_cols=67  Identities=18%  Similarity=-0.047  Sum_probs=45.2

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      |||+||+|-||..+++.....|.+|+++++++.+.+.....+   +.+....   .+.+.    -.++|+|+.++|.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~---~~~~~----~~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPL---AESEA----LEGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eeccccc---chhhh----cCCCCEEEECCCC
Confidence            689999999999999888888999999999876643322222   2111111   11111    1268999999975

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02583 cinnamoyl-CoA reductase

Probab=93.75  E-value=0.33  Score=51.25  Aligned_cols=37  Identities=19%  Similarity=0.170  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      .++.+|+|+||+|.||..+++.+...|.+|++++++.
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~   40 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN   40 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence            4678999999999999999998888999999998753

>PRK11895 ilvH acetolactate synthase 3 regulatory subunit; Reviewed

Probab=93.70  E-value=0.33  Score=47.28  Aligned_cols=70  Identities=10%  Similarity=0.181  Sum_probs=56.7

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINII  334 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL  334 (655)
                      ++.+.+.| +||.|+++..+|+.+|+|+..+-.-|... .+.+.+.+-+++ +..+.++.+.|++.-+-+++.
T Consensus         4 ~IsV~veN-~pGvL~rI~~lf~rrg~NI~Sl~v~~te~-~~~sriti~V~~~~~~i~qi~kQl~KLidV~~V~   74 (161)
T PRK11895          4 TLSVLVEN-EPGVLSRVAGLFSRRGYNIESLTVGPTED-PGLSRMTIVTSGDEQVIEQITKQLNKLIDVLKVV   74 (161)
T ss_pred             EEEEEEcC-CCcHHHHHHHHHHhCCCcEEEEEeeecCC-CCEEEEEEEEECCHHHHHHHHHHHhccccEEEEE
Confidence            45556677 99999999999999999999998888742 456667777888 778999999999987766554

>PLN02214 cinnamoyl-CoA reductase

Probab=93.70  E-value=0.23  Score=53.54  Aligned_cols=75  Identities=16%  Similarity=0.037  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH--HHHhC---CC-cEEE--eCCccchhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA--KAYGL---GA-DYVV--DHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~--~a~~L---GA-d~vI--d~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .+.+|+|+||+|.||..+++.+...|.+|++++++.++..  .+..+   +. -.++  |..+.  +++.+.+.    ++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~----~~   82 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY--EALKAAID----GC   82 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCCh--HHHHHHHh----cC
Confidence            6789999999999999999988888999999988765422  12222   11 1122  33222  12333332    68


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+|+.+++.
T Consensus        83 d~Vih~A~~   91 (342)
T PLN02214         83 DGVFHTASP   91 (342)
T ss_pred             CEEEEecCC
Confidence            999998864

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=93.67  E-value=0.36  Score=50.59  Aligned_cols=71  Identities=13%  Similarity=-0.020  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhC---CCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGL---GADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~L---GAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      ..+.+|+|.|+ ||+|.+++...+..|++|+++.+++++.+.+ ..+   |...++..        .+.   ....+|+|
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~--------~~~---~~~~~Div  182 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM--------DEL---PLHRVDLI  182 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech--------hhh---cccCccEE
Confidence            46889999999 8999998887777899999999988776544 333   32222211        111   11258999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      ++|++..
T Consensus       183 Inatp~g  189 (270)
T TIGR00507       183 INATSAG  189 (270)
T ss_pred             EECCCCC
Confidence            9999764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK07334 threonine dehydratase; Provisional

Probab=93.64  E-value=1.6  Score=48.55  Aligned_cols=72  Identities=18%  Similarity=0.272  Sum_probs=53.3

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccC----CCCCcceEEEEEecCCchHHHHHHHHHccCCcEEE
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSS----TRIENNYEFMVECAPGGDLSSVIESLRSSCSYINI  333 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~----~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~~v~i  333 (655)
                      .+.+.+...+ ++|.|.++++.+++.++|+..+.++..    +.......|-|++...+.+.++++.|++..-.+.+
T Consensus       326 ~v~l~I~~~d-r~GlL~dI~~~is~~~~nI~~v~~~~~~~~~~~~~~~i~l~i~V~d~~~L~~vi~~Lr~~g~~~~~  401 (403)
T PRK07334        326 LARLRVDIRD-RPGALARVTALIGEAGANIIEVSHQRLFTDLPAKGAELELVIETRDAAHLQEVIAALRAAGFEARL  401 (403)
T ss_pred             EEEEEEEeCC-CCCHHHHHHHHHhhCCCceEEEEEEecccCCCCCeEEEEEEEEeCCHHHHHHHHHHHHHcCCeeEe
Confidence            5778888888 899999999999999999999998754    22222333444443367889999999987554443

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=93.61  E-value=0.29  Score=52.54  Aligned_cols=35  Identities=14%  Similarity=0.113  Sum_probs=31.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV  146 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~  146 (655)
                      ++|||+||+|.||..+++.....|.+|++++++++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence            47999999999999999988888999999988653

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=93.55  E-value=0.4  Score=48.48  Aligned_cols=101  Identities=14%  Similarity=0.022  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC--CCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG--SEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~--~gv  181 (655)
                      ...+||-.|.  ++|..++.+|+++  +++|++++.++++.+.++    ..|.+.-|+....+..+....+....  +.+
T Consensus        45 ~~k~vLEIGt--~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~~f  122 (205)
T PF01596_consen   45 RPKRVLEIGT--FTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEGQF  122 (205)
T ss_dssp             T-SEEEEEST--TTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTTSE
T ss_pred             CCceEEEecc--ccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCCce
Confidence            4568999996  6777888899886  579999999998887774    45654323322221113333333322  379


Q ss_pred             eEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        182 DADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       182 DvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |.||--.... ..+-++.++++|++||.+|.=
T Consensus       123 D~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  123 DFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             EEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence            9986433343 324478899999999987764

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>KOG1203|consensus

Probab=93.54  E-value=0.27  Score=54.57  Aligned_cols=82  Identities=16%  Similarity=0.155  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-H----hCCCcEEEeCCccchhHHHHHHHh-cCCCee
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-Y----GLGADYVVDHTIRELDRFANQILS-YGSELD  182 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~----~LGAd~vId~~~~~~~d~~~~i~~-~~~gvD  182 (655)
                      ...++|+|.||+|.+|+..++.++.+|..|.+++++.++.+.. +    ..|+..|....... .+....+.+ ...+..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~-~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTA-IDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccc-cchhhhhhhhccccce
Confidence            4667899999999999999999999999999999987665443 3    34444443222211 122223222 222456


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      +++.|.|+.
T Consensus       156 ~v~~~~ggr  164 (411)
T KOG1203|consen  156 IVIKGAGGR  164 (411)
T ss_pred             eEEecccCC
Confidence            677666654

>PRK06382 threonine dehydratase; Provisional

Probab=93.48  E-value=2.9  Score=46.55  Aligned_cols=67  Identities=13%  Similarity=0.146  Sum_probs=48.5

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecc----cCCCCCcceEEEEEecC-C-chHHHHHHHHHccCCc
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESR----SSTRIENNYEFMVECAP-G-GDLSSVIESLRSSCSY  330 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSR----P~~~~~~~Y~FfVd~eg-~-~~v~~~l~~L~~~~~~  330 (655)
                      ++.+.+.+++ +||+|.++++++.+.++|+++++..    +..  ..+....+.++. + +...++++.|++..-.
T Consensus       330 ~~rl~v~v~D-~pG~L~~l~~ii~~~~~nI~~v~~~~~~~~~~--~~~~~v~i~vet~~~~~~~~v~~~L~~~Gy~  402 (406)
T PRK06382        330 LVRIECNIPD-RPGNLYRIANAIASNGGNIYHAEVDNLRKETP--PGFQSVTFTVNVRGQDHLDRILNALREMGYK  402 (406)
T ss_pred             EEEEEEEcCC-CCCHHHHHHHHHhcCCCcEEEEEEeeccccCC--CCcEEEEEEEEeCCHHHHHHHHHHHHHCCCC
Confidence            5667778888 9999999999999999999998864    433  334445555555 2 4445888888776433

>PRK07578 short chain dehydrogenase; Provisional

Probab=93.48  E-value=0.26  Score=48.32  Aligned_cols=64  Identities=19%  Similarity=0.106  Sum_probs=43.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +++|+|++||+|..++...... ++|+++++++.          ....|.++.  +++.+.+.+. +++|+++.++|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~--~~~~~~~~~~-~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDP--ASIRALFEKV-GKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCCh--HHHHHHHHhc-CCCCEEEECCCC
Confidence            6899999999999877655555 89999887643          123455543  2344434333 378999998875

>PLN00203 glutamyl-tRNA reductase

Probab=93.48  E-value=0.62  Score=53.53  Aligned_cols=74  Identities=14%  Similarity=0.029  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .+.+|+|.|+ |.+|.++++.+...|+ +|+++.++.++.+.+. .++...+ .....  ++..+.+.    +.|+|+.|
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~--~dl~~al~----~aDVVIsA  336 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPL--DEMLACAA----EADVVFTS  336 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecH--hhHHHHHh----cCCEEEEc
Confidence            5789999999 9999999999888997 7999999988876654 4532211 11110  12333332    68999999


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      ++..
T Consensus       337 T~s~  340 (519)
T PLN00203        337 TSSE  340 (519)
T ss_pred             cCCC
Confidence            9876

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.47  E-value=0.39  Score=54.02  Aligned_cols=89  Identities=17%  Similarity=0.057  Sum_probs=56.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|.|.||+|.+|...++.++..|.+|++.++++++. +.+.++|+..    ..    +..+.+.    ..|+|+-|+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~----~~----~~~e~~~----~aDvVIlavp~~   69 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY----AN----DNIDAAK----DADIVIISVPIN   69 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee----cc----CHHHHhc----cCCEEEEecCHH
Confidence            689999779999999999998999999999887774 5566777631    11    1222222    468888888765


Q ss_pred             h-HHHHHHHHHHhccccceEEEe
Q psy14589        192 V-YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       192 ~-~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      . .+.+.+....++++..++-++
T Consensus        70 ~~~~vl~~l~~~l~~~~iViDvs   92 (437)
T PRK08655         70 VTEDVIKEVAPHVKEGSLLMDVT   92 (437)
T ss_pred             HHHHHHHHHHhhCCCCCEEEEcc
Confidence            3 111233333444444444443

>PLN00198 anthocyanidin reductase; Provisional

Probab=93.47  E-value=0.29  Score=52.32  Aligned_cols=38  Identities=21%  Similarity=0.129  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG  147 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k  147 (655)
                      .+.+|+|+||+|.||..+++.....|.+|++++++.++
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~   45 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN   45 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence            57899999999999999998888889999888776543

>PLN02366 spermidine synthase

Probab=93.43  E-value=0.38  Score=51.63  Aligned_cols=102  Identities=10%  Similarity=-0.000  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCc-EEEeCCc-c-chhHHHHHHHhc-CCCee
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGAD-YVVDHTI-R-ELDRFANQILSY-GSELD  182 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd-~vId~~~-~-~~~d~~~~i~~~-~~gvD  182 (655)
                      +++++|||.|+ | -|.++..++|.-+. +|.+++.+++-.+.+++ +... ...+..+ . -..|..+.+++. .+.+|
T Consensus        90 ~~pkrVLiIGg-G-~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD  167 (308)
T PLN02366         90 PNPKKVLVVGG-G-DGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD  167 (308)
T ss_pred             CCCCeEEEEcC-C-ccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence            56789999997 3 36677888888665 78889988877777765 2210 0010000 0 001344445544 34799


Q ss_pred             EEEeCCCcc--------hHHHHHHHHHHhccccceEEE
Q psy14589        183 ADHPGFTDP--------VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       183 vV~D~vG~~--------~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+--...+        +-+-++.+.++|+++|.++.-
T Consensus       168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            986433221        112367888899999998763

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=93.39  E-value=0.41  Score=53.26  Aligned_cols=76  Identities=13%  Similarity=0.060  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589        110 EPDTLFIIGA----------------NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus       110 ~Gd~VLI~Ga----------------sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~  173 (655)
                      .|.+|+|+||                ||.+|.++++.+..+|++|+.+++..+ .+  ...|. ..+|.++.  ++..+.
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~~~~~-~~~dv~~~--~~~~~~  260 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--TPAGV-KRIDVESA--QEMLDA  260 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--CCCCc-EEEccCCH--HHHHHH
Confidence            7899999999                666999999999999999998876542 11  11232 35666553  356666


Q ss_pred             HHhcCCCeeEEEeCCCcc
Q psy14589        174 ILSYGSELDADHPGFTDP  191 (655)
Q Consensus       174 i~~~~~gvDvV~D~vG~~  191 (655)
                      +.+.-+.+|+++.++|-.
T Consensus       261 v~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        261 VLAALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHhcCCCCEEEEccccc
Confidence            665545789999887644

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=93.39  E-value=0.59  Score=41.63  Aligned_cols=95  Identities=16%  Similarity=-0.035  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhc-CCCee
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSY-GSELD  182 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~-~~gvD  182 (655)
                      |.+|+-.|+  |.|..++.+++....++++++.++...+.++.    .+.+   .++.   .   |+.+..... .+.+|
T Consensus         1 g~~vlD~~~--G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~---~---D~~~~~~~~~~~~~D   72 (117)
T PF13659_consen    1 GDRVLDPGC--GSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV---G---DARDLPEPLPDGKFD   72 (117)
T ss_dssp             TEEEEEETS--TTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE---S---HHHHHHHTCTTT-EE
T ss_pred             CCEEEEcCc--chHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE---C---chhhchhhccCceeE
Confidence            678887776  55556666666654799999999988777753    4442   2222   1   444444333 24899


Q ss_pred             EEEeCCCcc------------hHHHHHHHHHHhccccceEEEe
Q psy14589        183 ADHPGFTDP------------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       183 vV~D~vG~~------------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+-...-.            ..+.++.+.+.|++||+++++.
T Consensus        73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~  115 (117)
T PF13659_consen   73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFIT  115 (117)
T ss_dssp             EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence            998532111            1244788999999999998864

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	655
1phz_A	429	Structure Of Phosphorylated Phenylalanine Hydroxyla		2e-93
1phz_A	429	Structure Of Phosphorylated Phenylalanine Hydroxyla		6e-36
4anp_A	324	Crystal Structure Of Human Phenylalanine Hydroxylas		5e-80
4anp_A	324	Crystal Structure Of Human Phenylalanine Hydroxylas		1e-35
1j8t_A	325	Catalytic Domain Of Human Phenylalanine Hydroxylase		5e-80
1j8t_A	325	Catalytic Domain Of Human Phenylalanine Hydroxylase		1e-35
2pah_A	335	Tetrameric Human Phenylalanine Hydroxylase Length =		5e-80
2pah_A	335	Tetrameric Human Phenylalanine Hydroxylase Length =		1e-35
1dmw_A	307	Crystal Structure Of Double Truncated Human Phenyla		9e-80
1dmw_A	307	Crystal Structure Of Double Truncated Human Phenyla		2e-35
1pah_A	308	Human Phenylalanine Hydroxylase Dimer, Residues 117		1e-79
1pah_A	308	Human Phenylalanine Hydroxylase Dimer, Residues 117		2e-35
1tdw_A	308	Crystal Structure Of Double Truncated Human Phenyla		3e-79
1tdw_A	308	Crystal Structure Of Double Truncated Human Phenyla		5e-35
3e2t_A	314	The Catalytic Domain Of Chicken Tryptophan Hydroxyl		6e-71
1mlw_A	301	Crystal Structure Of Human Tryptophan Hydroxylase W		7e-70
3hf6_A	290	Crystal Structure Of Human Tryptophan Hydroxylase T		8e-70
1toh_A	343	Tyrosine Hydroxylase Catalytic And Tetramerization		1e-61
1toh_A	343	Tyrosine Hydroxylase Catalytic And Tetramerization		7e-31
2xsn_A	343	Crystal Structure Of Human Tyrosine Hydroxylase Cat		4e-61
2xsn_A	343	Crystal Structure Of Human Tyrosine Hydroxylase Cat		3e-31
2toh_A	343	Tyrosine Hydroxylase Catalytic And Tetramerization		7e-61
2toh_A	343	Tyrosine Hydroxylase Catalytic And Tetramerization		5e-30
2v28_A	267	Apo Structure Of The Cold Active Phenylalanine Hydr		5e-13
2v28_A	267	Apo Structure Of The Cold Active Phenylalanine Hydr		4e-09
2v27_A	275	Structure Of The Cold Active Phenylalanine Hydroxyl		6e-13
2v27_A	275	Structure Of The Cold Active Phenylalanine Hydroxyl		4e-09
3tk2_A	302	Crystallographic Structure Of Phenylalanine Hydroxy		2e-10
3tk2_A	302	Crystallographic Structure Of Phenylalanine Hydroxy		5e-09
1ltu_A	297	Crystal Structure Of Chromobacterium Violaceum, Apo		2e-10
1ltu_A	297	Crystal Structure Of Chromobacterium Violaceum, Apo		4e-09
3tcy_A	302	Crystallographic Structure Of Phenylalanine Hydroxy		2e-10
3tcy_A	302	Crystallographic Structure Of Phenylalanine Hydroxy		5e-09

>pdb|1PHZ|A Chain A, Structure Of Phosphorylated Phenylalanine Hydroxylase Length = 429

Iteration: 1
 Score =  340 bits (871), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 183/320 (57%), Positives = 225/320 (70%), Gaps = 37/320 (11%)
Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFM--VECAPGGDLSSVI 321
           +IFS  ++EVGALAK L+LF+++++NL HIESR S   ++ YEF   ++      L S+I
Sbjct: 37  LIFS-LKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSII 95
Query: 322 ESLRSSC-SYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVY 380
           +SLR+   + ++ +SR+  + + VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVY
Sbjct: 96  KSLRNDIGATVHELSRDKEK-NTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVY 154
Query: 381 RARRKYFADLAFNYKHSILL----------------------------MPEHNHVFPLLI 412
           RARRK FAD+A+NY+H   +                              EHNH+FPLL 
Sbjct: 155 RARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLLE 214
Query: 413 QNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSK 472
           + CG+ EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SK
Sbjct: 215 KYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSK 274
Query: 473 PLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLA 532
           P+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L 
Sbjct: 275 PMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLC 334
Query: 533 SLSPDSTGFSLRPVAGLLSS 552
                   +     AGLLSS
Sbjct: 335 KEGDSIKAYG----AGLLSS 350

>pdb|1PHZ|A Chain A, Structure Of Phosphorylated Phenylalanine Hydroxylase Length = 429

Iteration: 1
 Score =  149 bits (375), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 224 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 283
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 284 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 314

>pdb|4ANP|A Chain A, Crystal Structure Of Human Phenylalanine Hydroxylase In Complex With A Pharmacological Chaperone Length = 324

Iteration: 1
 Score =  295 bits (755), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 153/250 (61%), Positives = 178/250 (71%), Gaps = 33/250 (13%)
Query: 331 INIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADL 390
           ++ +SR+  +   VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+
Sbjct: 3   VHELSRDKKK-DTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADI 61
Query: 391 AFNYKHS-----ILLMP-----------------------EHNHVFPLLIQNCGYAEDNI 422
           A+NY+H      +  M                        E+NH+FPLL + CG+ EDNI
Sbjct: 62  AYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNI 121
Query: 423 PQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVC 482
           PQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+C
Sbjct: 122 PQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDIC 181
Query: 483 HELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFS 542
           HELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L         + 
Sbjct: 182 HELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG 241
Query: 543 LRPVAGLLSS 552
               AGLLSS
Sbjct: 242 ----AGLLSS 247

>pdb|4ANP|A Chain A, Crystal Structure Of Human Phenylalanine Hydroxylase In Complex With A Pharmacological Chaperone Length = 324

Iteration: 1
 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 121 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 180
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 181 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 211

>pdb|1J8T|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase Fe(Ii) Length = 325

Iteration: 1
 Score =  295 bits (755), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 153/250 (61%), Positives = 178/250 (71%), Gaps = 33/250 (13%)
Query: 331 INIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADL 390
           ++ +SR+  +   VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+
Sbjct: 4   VHELSRDKKK-DTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADI 62
Query: 391 AFNYKHS-----ILLMP-----------------------EHNHVFPLLIQNCGYAEDNI 422
           A+NY+H      +  M                        E+NH+FPLL + CG+ EDNI
Sbjct: 63  AYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNI 122
Query: 423 PQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVC 482
           PQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+C
Sbjct: 123 PQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDIC 182
Query: 483 HELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFS 542
           HELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L         + 
Sbjct: 183 HELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG 242
Query: 543 LRPVAGLLSS 552
               AGLLSS
Sbjct: 243 ----AGLLSS 248

>pdb|1J8T|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase Fe(Ii) Length = 325

Iteration: 1
 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 122 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 181
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 182 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 212

>pdb|2PAH|A Chain A, Tetrameric Human Phenylalanine Hydroxylase Length = 335

Iteration: 1
 Score =  295 bits (755), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 171/237 (72%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
           VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H      +
Sbjct: 1   VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 60
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
             M                        E+NH+FPLL + CG+ EDNIPQLED+S+FL+  
Sbjct: 61  EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 120
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D 
Sbjct: 121 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 180
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L         +     AGLLSS
Sbjct: 181 SFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 233

>pdb|2PAH|A Chain A, Tetrameric Human Phenylalanine Hydroxylase Length = 335

Iteration: 1
 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 107 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 166
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 167 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 197

>pdb|1DMW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine Hydroxylase With Bound 7,8-Dihydro-L-Biopterin Length = 307

Iteration: 1
 Score =  294 bits (753), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 171/237 (72%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
           VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H      +
Sbjct: 1   VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 60
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
             M                        E+NH+FPLL + CG+ EDNIPQLED+S+FL+  
Sbjct: 61  EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 120
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D 
Sbjct: 121 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 180
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L         +     AGLLSS
Sbjct: 181 SFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 233

>pdb|1DMW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine Hydroxylase With Bound 7,8-Dihydro-L-Biopterin Length = 307

Iteration: 1
 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 107 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 166
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 167 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 197

>pdb|1PAH|A Chain A, Human Phenylalanine Hydroxylase Dimer, Residues 117-424 Length = 308

Iteration: 1
 Score =  294 bits (753), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 151/237 (63%), Positives = 171/237 (72%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
           VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H      +
Sbjct: 2   VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 61
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
             M                        E+NH+FPLL + CG+ EDNIPQLED+S+FL+  
Sbjct: 62  EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D 
Sbjct: 122 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           SFAQFSQEIGLASLGAPDEY+E+LAT   F +   L         +     AGLLSS
Sbjct: 182 SFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 234

>pdb|1PAH|A Chain A, Human Phenylalanine Hydroxylase Dimer, Residues 117-424 Length = 308

Iteration: 1
 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 108 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 167
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 168 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 198

>pdb|1TDW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine Hydroxylase Bh4-Responsive Pku Mutant A313t. Length = 308

Iteration: 1
 Score =  293 bits (749), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 150/237 (63%), Positives = 170/237 (71%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
           VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H      +
Sbjct: 2   VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 61
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
             M                        E+NH+FPLL + CG+ EDNIPQLED+S+FL+  
Sbjct: 62  EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D 
Sbjct: 122 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           SFAQFSQEIGLASLG PDEY+E+LAT   F +   L         +     AGLLSS
Sbjct: 182 SFAQFSQEIGLASLGTPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 234

>pdb|1TDW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine Hydroxylase Bh4-Responsive Pku Mutant A313t. Length = 308

Iteration: 1
 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/91 (78%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S      TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 108 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 167
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVPLF+D SFAQFSQEIGLASLG P
Sbjct: 168 CHELLGHVPLFSDRSFAQFSQEIGLASLGTP 198

>pdb|3E2T|A Chain A, The Catalytic Domain Of Chicken Tryptophan Hydroxylase 1 With Bound Tryptophan Length = 314

Iteration: 1
 Score =  265 bits (677), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 131/215 (60%), Positives = 151/215 (70%), Gaps = 28/215 (13%)
Query: 341 FHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI-- 398
              +PW+P++I +LD+ AN++L YGS+LDADHPGF D VYR RRKYFADLA NYKH    
Sbjct: 3   MENIPWYPKKISDLDKCANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMNYKHGDPI 62
Query: 399 ---------------------LLMPEHN-----HVFPLLIQNCGYAEDNIPQLEDISKFL 432
                                 L P H         PLL + CGY EDNIPQLED+S+FL
Sbjct: 63  PEIEFTEEEIKTWGTVYRELNKLYPTHACREYLKNLPLLTKYCGYREDNIPQLEDVSRFL 122
Query: 433 KDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLF 492
           K+ TGF++RPVAG LS RDFLAGLAFRVFH TQY+RH S PLYTPEPD CHELLGHVPL 
Sbjct: 123 KERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLL 182
Query: 493 ADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMI 527
           A+PSFAQFSQEIGLASLGA DE V++LAT   F +
Sbjct: 183 AEPSFAQFSQEIGLASLGASDEAVQKLATCYFFTV 217

>pdb|1MLW|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase With Bound 7,8-Dihydro-L-Biopterin Cofactor And Fe(Iii) Length = 301

Iteration: 1
 Score =  261 bits (668), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 140/237 (59%), Positives = 156/237 (65%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI----- 398
           VPWFP++I +LD  AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH       
Sbjct: 4   VPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKV 63
Query: 399 ------------------LLMPEHN-----HVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                              L P H         PLL + CGY EDNIPQLED+S FLK+ 
Sbjct: 64  EFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKER 123
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL A+P
Sbjct: 124 TGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEP 183
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           SFAQFSQEIGLASLGA +E V++LAT   F +   L         F     AGLLSS
Sbjct: 184 SFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFG----AGLLSS 236

>pdb|3HF6|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase Type 1 With Bound Lp-521834 And Fe Length = 290

Iteration: 1
 Score =  261 bits (667), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 140/237 (59%), Positives = 156/237 (65%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI----- 398
           VPWFP++I +LD  AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH       
Sbjct: 2   VPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKV 61
Query: 399 ------------------LLMPEHN-----HVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                              L P H         PLL + CGY EDNIPQLED+S FLK+ 
Sbjct: 62  EFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKER 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL A+P
Sbjct: 122 TGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEP 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           SFAQFSQEIGLASLGA +E V++LAT   F +   L         F     AGLLSS
Sbjct: 182 SFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFG----AGLLSS 234

>pdb|1TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains From Rat Length = 343

Iteration: 1
 Score =  234 bits (597), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 122/237 (51%), Positives = 152/237 (64%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
           VPWFPR++ ELD+  + +  +  +LD DHPGF+D VYR RRK  A++AF YKH       
Sbjct: 9   VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHV 68
Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                                +     EH   F LL + CGY ED+IPQLED+S+FLK+ 
Sbjct: 69  EYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKER 128
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ AD 
Sbjct: 129 TGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 188
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           +FAQFSQ+IGLASLGA DE +E+L+T   F +   L   + +   +     AGLLSS
Sbjct: 189 TFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYG----AGLLSS 241

>pdb|1TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains From Rat Length = 343

Iteration: 1
 Score =  132 bits (331), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 3/90 (3%)
Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S    + TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD 
Sbjct: 115 IPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDC 174
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGA 614
           CHELLGHVP+ AD +FAQFSQ+IGLASLGA
Sbjct: 175 CHELLGHVPMLADRTFAQFSQDIGLASLGA 204

>pdb|2XSN|A Chain A, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic Domain Length = 343

Iteration: 1
 Score =  232 bits (592), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 121/237 (51%), Positives = 151/237 (63%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
           VPWFPR++ ELD+  + +  +  +LD DHPGF+D VYR RRK  A++AF Y+H       
Sbjct: 2   VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRHGDPIPRV 61
Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                                +     EH   F LL +  GY EDNIPQLED+S+FLK+ 
Sbjct: 62  EYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKER 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ AD 
Sbjct: 122 TGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           +FAQFSQ+IGLASLGA DE +E+L+T   F +   L   + +   +     AGLLSS
Sbjct: 182 TFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYG----AGLLSS 234

>pdb|2XSN|A Chain A, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic Domain Length = 343

Iteration: 1
 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/118 (59%), Positives = 84/118 (71%), Gaps = 8/118 (6%)
Query: 505 GLASLGAPDEYVERLATSNNFM-----IVPRLASLS---PDSTGFSLRPVAGLLSSRDFL 556
           GL +  A  E++E  A    F       +P+L  +S    + TGF LRPVAGLLS+RDFL
Sbjct: 80  GLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKERTGFQLRPVAGLLSARDFL 139
Query: 557 AGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
           A LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ AD +FAQFSQ+IGLASLGA
Sbjct: 140 ASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGA 197

>pdb|2TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains From Rat Length = 343

Iteration: 1
 Score =  231 bits (590), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 121/237 (51%), Positives = 151/237 (63%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
           VPWFPR++ ELD+  + +  +  +LD DHPGF+D VYR RRK  A++AF YKH       
Sbjct: 9   VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHV 68
Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                                +     EH   F LL + CGY ED+IPQLED+S+FLK+ 
Sbjct: 69  EYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKER 128
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLS+RD LA LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ AD 
Sbjct: 129 TGFQLRPVAGLLSARDXLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 188
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
           +FAQFSQ+IGLASLGA DE +E+L+T   F +   L   + +   +     AGLLSS
Sbjct: 189 TFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYG----AGLLSS 241

>pdb|2TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains From Rat Length = 343

Iteration: 1
 Score =  129 bits (324), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 3/90 (3%)
Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S    + TGF LRPVAGLLS+RD LA LAFRVF  TQYIRH S P+++PEPD 
Sbjct: 115 IPQLEDVSRFLKERTGFQLRPVAGLLSARDXLASLAFRVFQCTQYIRHASSPMHSPEPDC 174
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGA 614
           CHELLGHVP+ AD +FAQFSQ+IGLASLGA
Sbjct: 175 CHELLGHVPMLADRTFAQFSQDIGLASLGA 204

>pdb|2V28|A Chain A, Apo Structure Of The Cold Active Phenylalanine Hydroxylase From Colwellia Psychrerythraea 34h Length = 267

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
           D IPQL+++SK LK STG+   PV  L+   +F   L+ + F    +IR   +  Y  EP
Sbjct: 59  DRIPQLDEVSKVLKVSTGWECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEP 118
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE 514
           D+ HE+ GH PL  + SFA +++  G   L A  E
Sbjct: 119 DIFHEIFGHCPLLTNSSFANYTEAYGKMGLNATKE 153

>pdb|2V28|A Chain A, Apo Structure Of The Cold Active Phenylalanine Hydroxylase From Colwellia Psychrerythraea 34h Length = 267

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 500 FSQEIGLASLGAPDEYVERLATSN-NFMIVPRLASLSPD---STGFSLRPVAGLLSSRDF 555
           F+++I      A DEY E LA  N     +P+L  +S     STG+   PV  L+   +F
Sbjct: 32  FTRQIACIKDKACDEYHEGLAKLNLPTDRIPQLDEVSKVLKVSTGWECYPVPALIGFGEF 91
Query: 556 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
              L+ + F    +IR   +  Y  EPD+ HE+ GH PL  + SFA +++  G   L A
Sbjct: 92  FRLLSEKKFPVATFIRSREEMDYLQEPDIFHEIFGHCPLLTNSSFANYTEAYGKMGLNA 150

>pdb|2V27|A Chain A, Structure Of The Cold Active Phenylalanine Hydroxylase From Colwellia Psychrerythraea 34h Length = 275

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
           D IPQL+++SK LK STG+   PV  L+   +F   L+ + F    +IR   +  Y  EP
Sbjct: 59  DRIPQLDEVSKVLKVSTGWECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEP 118
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE 514
           D+ HE+ GH PL  + SFA +++  G   L A  E
Sbjct: 119 DIFHEIFGHCPLLTNSSFANYTEAYGKMGLNATKE 153

>pdb|2V27|A Chain A, Structure Of The Cold Active Phenylalanine Hydroxylase From Colwellia Psychrerythraea 34h Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 500 FSQEIGLASLGAPDEYVERLATSN-NFMIVPRLASLSPD---STGFSLRPVAGLLSSRDF 555
           F+++I      A DEY E LA  N     +P+L  +S     STG+   PV  L+   +F
Sbjct: 32  FTRQIACIKDKACDEYHEGLAKLNLPTDRIPQLDEVSKVLKVSTGWECYPVPALIGFGEF 91
Query: 556 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
              L+ + F    +IR   +  Y  EPD+ HE+ GH PL  + SFA +++  G   L A
Sbjct: 92  FRLLSEKKFPVATFIRSREEMDYLQEPDIFHEIFGHCPLLTNSSFANYTEAYGKMGLNA 150

>pdb|3TK2|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase From Chromobacterium Violaceum Cocrystallized With Phenylalanine In A Site Distal To The Active Site Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
           D +P    +++ L  +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EP
Sbjct: 80  DRVPDFNKLNQKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEP 139
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGA 511
           DV H+L GHVPL  +P FA + +  G   + A
Sbjct: 140 DVFHDLFGHVPLLINPVFADYLEAYGKGGVKA 171

>pdb|3TK2|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase From Chromobacterium Violaceum Cocrystallized With Phenylalanine In A Site Distal To The Active Site Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 597
           +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EPDV H+L GHVPL  +
Sbjct: 95  ATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLIN 154
Query: 598 PSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGL 646
           P FA + +  G   + A         + LG +P+ A      ++ E GL
Sbjct: 155 PVFADYLEAYGKGGVKA---------KALGALPMLA--RLYWYTVEFGL 192

>pdb|1LTU|A Chain A, Crystal Structure Of Chromobacterium Violaceum, Apo (No Iron Bound) Structure Length = 297

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
           D +P    +++ L  +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EP
Sbjct: 75  DRVPDFNKLNEKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEP 134
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGA 511
           DV H+L GHVPL  +P FA + +  G   + A
Sbjct: 135 DVFHDLFGHVPLLINPVFADYLEAYGKGGVKA 166

>pdb|1LTU|A Chain A, Crystal Structure Of Chromobacterium Violaceum, Apo (No Iron Bound) Structure Length = 297

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 597
           +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EPDV H+L GHVPL  +
Sbjct: 90  ATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLIN 149
Query: 598 PSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGL 646
           P FA + +  G   + A         + LG +P+ A      ++ E GL
Sbjct: 150 PVFADYLEAYGKGGVKA---------KALGALPMLA--RLYWYTVEFGL 187

>pdb|3TCY|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase From Chromobacterium Violaceum (Cpah) Bound To Phenylalanine In A Site Distal To The Active Site Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
           D +P    +++ L  +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EP
Sbjct: 80  DRVPDFNKLNEKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEP 139
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGA 511
           DV H+L GHVPL  +P FA + +  G   + A
Sbjct: 140 DVFHDLFGHVPLLINPVFADYLEAYGKGGVKA 171

>pdb|3TCY|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase From Chromobacterium Violaceum (Cpah) Bound To Phenylalanine In A Site Distal To The Active Site Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 597
           +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EPDV H+L GHVPL  +
Sbjct: 95  ATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLIN 154
Query: 598 PSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGL 646
           P FA + +  G   + A         + LG +P+ A      ++ E GL
Sbjct: 155 PVFADYLEAYGKGGVKA---------KALGALPMLA--RLYWYTVEFGL 192

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	655
1phz_A	429	Protein (phenylalanine hydroxylase); aromatic amin	1e-76
1phz_A	429	Protein (phenylalanine hydroxylase); aromatic amin	3e-37
1phz_A	429	Protein (phenylalanine hydroxylase); aromatic amin	2e-26
1phz_A	429	Protein (phenylalanine hydroxylase); aromatic amin	6e-09
1j8u_A	325	Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1	1e-63
1j8u_A	325	Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1	5e-37
1j8u_A	325	Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1	1e-25
1j8u_A	325	Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1	2e-10
1toh_A	343	Tyroh, tyrosine hydroxylase; neurotransmitter bios	8e-63
1toh_A	343	Tyroh, tyrosine hydroxylase; neurotransmitter bios	6e-37
1toh_A	343	Tyroh, tyrosine hydroxylase; neurotransmitter bios	2e-24
1toh_A	343	Tyroh, tyrosine hydroxylase; neurotransmitter bios	2e-11
1mlw_A	301	Tryptophan 5-monooxygenase; aromatic amino acid hy	1e-59
1mlw_A	301	Tryptophan 5-monooxygenase; aromatic amino acid hy	1e-37
1mlw_A	301	Tryptophan 5-monooxygenase; aromatic amino acid hy	4e-25
1mlw_A	301	Tryptophan 5-monooxygenase; aromatic amino acid hy	2e-09
1ltz_A	297	Phenylalanine-4-hydroxylase; oxidoreductase, dihyd	3e-46
1ltz_A	297	Phenylalanine-4-hydroxylase; oxidoreductase, dihyd	2e-35
1ltz_A	297	Phenylalanine-4-hydroxylase; oxidoreductase, dihyd	3e-27
1ltz_A	297	Phenylalanine-4-hydroxylase; oxidoreductase, dihyd	5e-06
2v27_A	275	Phenylalanine hydroxylase; cold adaptation, tetrah	8e-35
2v27_A	275	Phenylalanine hydroxylase; cold adaptation, tetrah	4e-33
2v27_A	275	Phenylalanine hydroxylase; cold adaptation, tetrah	7e-26
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-08
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-08
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-08
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	6e-08
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-08
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	7e-08
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-07
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-07
2qmw_A	267	PDT, prephenate dehydratase; APC85812, prephenate	3e-07
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-07
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-07
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-07
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-06
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	1e-06
3mwb_A	313	Prephenate dehydratase; L-Phe, PSI, MCSG, structur	1e-06
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-06
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-06
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	7e-06
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-06
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	8e-06
3luy_A	329	Probable chorismate mutase; structural genomics, A	2e-05
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-05
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	3e-05
2qmx_A	283	Prephenate dehydratase; APC86053, L-Phe inhibition	6e-05
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-04
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-04
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	3e-04
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-04
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	5e-04
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	6e-04
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	7e-04
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	8e-04

>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A Length = 429

 Score =  250 bits (640), Expect = 1e-76
 Identities = 174/294 (59%), Positives = 208/294 (70%), Gaps = 31/294 (10%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMV--ECAPGGDLSSVI 321
           +IFS   +EVGALAK L+LF+++++NL HIESR S   ++ YEF    +      L S+I
Sbjct: 37  LIFSLK-EEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSII 95

Query: 322 ESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYR 381
           +SLR+             + + VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYR
Sbjct: 96  KSLRNDIGATVHELSRDKEKNTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYR 155

Query: 382 ARRKYFADLAFNYKHSI----------------LLM------------PEHNHVFPLLIQ 413
           ARRK FAD+A+NY+H                   +              EHNH+FPLL +
Sbjct: 156 ARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLLEK 215

Query: 414 NCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 473
            CG+ EDNIPQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP
Sbjct: 216 YCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKP 275

Query: 474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMI 527
           +YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +
Sbjct: 276 MYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTV 329

>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A Length = 429

 Score =  143 bits (361), Expect = 3e-37
 Identities = 83/113 (73%), Positives = 94/113 (83%)

Query: 2   EPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDIS 61
           +P+PRV+YT EE +TWG VFR L  LY THAC EHNH+FPLL + CG+ EDNIPQLED+S
Sbjct: 172 QPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFREDNIPQLEDVS 231

Query: 62  KFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL 114
           +FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD  
Sbjct: 232 QFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDIC 284

>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A Length = 429

 Score =  111 bits (278), Expect = 2e-26
 Identities = 75/135 (55%), Positives = 85/135 (62%), Gaps = 10/135 (7%)

Query: 481 VCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTG 540
           V   L       A          +     G  ++ + +L   + F+            TG
Sbjct: 190 VFRTLKALYKTHACYEHNH-IFPLLEKYCGFREDNIPQLEDVSQFLQ---------TCTG 239

Query: 541 FSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSF 600
           F LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SF
Sbjct: 240 FRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSF 299

Query: 601 AQFSQEIGLASLGAP 615
           AQFSQEIGLASLGAP
Sbjct: 300 AQFSQEIGLASLGAP 314

>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A Length = 429

 Score = 57.8 bits (139), Expect = 6e-09
 Identities = 40/49 (81%), Positives = 45/49 (91%)

Query: 161 DHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
             TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 122 PRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 170

>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A* Length = 325

 Score =  213 bits (542), Expect = 1e-63
 Identities = 145/225 (64%), Positives = 169/225 (75%), Gaps = 29/225 (12%)

Query: 331 INIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADL 390
           ++ +SR+  +   VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+
Sbjct: 4   VHELSRD-KKKDTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADI 62

Query: 391 AFNYKHSI----------------LLM------------PEHNHVFPLLIQNCGYAEDNI 422
           A+NY+H                   +              E+NH+FPLL + CG+ EDNI
Sbjct: 63  AYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNI 122

Query: 423 PQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVC 482
           PQLED+S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+C
Sbjct: 123 PQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDIC 182

Query: 483 HELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMI 527
           HELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT   F +
Sbjct: 183 HELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTV 227

>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A* Length = 325

 Score =  140 bits (353), Expect = 5e-37
 Identities = 81/113 (71%), Positives = 93/113 (82%)

Query: 2   EPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDIS 61
           +P+PRV+Y  EE KTWG VF+ L  LY THAC E+NH+FPLL + CG+ EDNIPQLED+S
Sbjct: 70  QPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVS 129

Query: 62  KFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL 114
           +FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD  
Sbjct: 130 QFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDIC 182

>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A* Length = 325

 Score =  107 bits (267), Expect = 1e-25
 Identities = 75/113 (66%), Positives = 82/113 (72%), Gaps = 8/113 (7%)

Query: 511 APDEYVERLATSNNFMI-----VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFR 562
           A  EY         +       +P+L  +S      TGF LRPVAGLLSSRDFL GLAFR
Sbjct: 100 ACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFR 159

Query: 563 VFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           VFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 160 VFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAP 212

>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A* Length = 325

 Score = 62.0 bits (150), Expect = 2e-10
 Identities = 39/46 (84%), Positives = 44/46 (95%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 23  IQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 68

>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A Length = 343

 Score =  211 bits (537), Expect = 8e-63
 Identities = 115/212 (54%), Positives = 141/212 (66%), Gaps = 28/212 (13%)

Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI----- 398
           VPWFPR++ ELD+  + +  +  +LD DHPGF+D VYR RRK  A++AF YKH       
Sbjct: 9   VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHV 68

Query: 399 -----------------------LLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                                      EH   F LL + CGY ED+IPQLED+S+FLK+ 
Sbjct: 69  EYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKER 128

Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ AD 
Sbjct: 129 TGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 188

Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMI 527
           +FAQFSQ+IGLASLGA DE +E+L+T   F +
Sbjct: 189 TFAQFSQDIGLASLGASDEEIEKLSTVYWFTV 220

>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A Length = 343

 Score =  140 bits (353), Expect = 6e-37
 Identities = 76/114 (66%), Positives = 89/114 (78%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           GEP+P V+YTAEE  TW EV+  L  LY THAC+EH   F LL + CGY ED+IPQLED+
Sbjct: 62  GEPIPHVEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDV 121

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL 114
           S+FLK+ TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD  
Sbjct: 122 SRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCC 175

>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A Length = 343

 Score =  104 bits (260), Expect = 2e-24
 Identities = 63/91 (69%), Positives = 74/91 (81%), Gaps = 3/91 (3%)

Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
           +P+L  +S    + TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD 
Sbjct: 115 IPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDC 174

Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           CHELLGHVP+ AD +FAQFSQ+IGLASLGA 
Sbjct: 175 CHELLGHVPMLADRTFAQFSQDIGLASLGAS 205

>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A Length = 343

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 23/47 (48%), Positives = 32/47 (68%)

Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
            + ELD+  + +  +  +LD DHPGF+D VYR RRK  A++AF YKH
Sbjct: 15  KVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKH 61

>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A* Length = 301

 Score =  201 bits (512), Expect = 1e-59
 Identities = 130/212 (61%), Positives = 148/212 (69%), Gaps = 28/212 (13%)

Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI----- 398
           VPWFP++I +LD  AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH       
Sbjct: 4   VPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKV 63

Query: 399 -----------LLM------------PEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                       +              E+    PLL + CGY EDNIPQLED+S FLK+ 
Sbjct: 64  EFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKER 123

Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL A+P
Sbjct: 124 TGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEP 183

Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMI 527
           SFAQFSQEIGLASLGA +E V++LAT   F +
Sbjct: 184 SFAQFSQEIGLASLGASEEAVQKLATCYFFTV 215

>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A* Length = 301

 Score =  140 bits (355), Expect = 1e-37
 Identities = 79/113 (69%), Positives = 92/113 (81%)

Query: 2   EPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDIS 61
           +P+P+V++T EE KTWG VFR L KLYPTHAC+E+    PLL + CGY EDNIPQLED+S
Sbjct: 58  DPIPKVEFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVS 117

Query: 62  KFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL 114
            FLK+ TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPDT 
Sbjct: 118 NFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTC 170

>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A* Length = 301

 Score =  105 bits (262), Expect = 4e-25
 Identities = 73/123 (59%), Positives = 86/123 (69%), Gaps = 8/123 (6%)

Query: 500 FSQEIGLASLGAPDEYVERLATSNNFMI-----VPRLASLSP---DSTGFSLRPVAGLLS 551
           F +   L    A  EY++ L   + +       +P+L  +S    + TGFS+RPVAG LS
Sbjct: 77  FRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKERTGFSIRPVAGYLS 136

Query: 552 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLAS 611
            RDFL+GLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL A+PSFAQFSQEIGLAS
Sbjct: 137 PRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLAS 196

Query: 612 LGA 614
           LGA
Sbjct: 197 LGA 199

>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A* Length = 301

 Score = 58.2 bits (140), Expect = 2e-09
 Identities = 35/47 (74%), Positives = 38/47 (80%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHF 210
           I +LD  AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH 
Sbjct: 11  ISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHG 57

>1ltz_A Phenylalanine-4-hydroxylase; oxidoreductase, dihydrobiopterin, bacterial enzyme; HET: HBI; 1.40A {Chromobacterium violaceum} SCOP: d.178.1.1 PDB: 1ltv_A 1ltu_A* Length = 297

 Score =  164 bits (417), Expect = 3e-46
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 24/182 (13%)

Query: 370 ADHPGFTDPVYRARRKY-FADLAFNYKHSI---------------------LLMPEHNH- 406
            D   F  P    R+    +  A ++                          L+P     
Sbjct: 2   NDRADFVVPDITTRKNVGLSHDANDFTLPQPLDRYSAEDHATWATLYQRQCKLLPGRACD 61

Query: 407 VFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQY 466
            F   ++      D +P    +++ L  +TG+ +  V GL+    F   LA R F  T +
Sbjct: 62  EFLEGLERLEVDADRVPDFNKLNEKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWW 121

Query: 467 IRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA-PDEYVERLATSNNF 525
           +R P +  Y  EPDV H+L GHVPL  +P FA + +  G   + A     +  LA    +
Sbjct: 122 LREPHQLDYLQEPDVFHDLFGHVPLLINPVFADYLEAYGKGGVKAKALGALPMLARLYWY 181

Query: 526 MI 527
            +
Sbjct: 182 TV 183

>1ltz_A Phenylalanine-4-hydroxylase; oxidoreductase, dihydrobiopterin, bacterial enzyme; HET: HBI; 1.40A {Chromobacterium violaceum} SCOP: d.178.1.1 PDB: 1ltv_A 1ltu_A* Length = 297

 Score =  135 bits (340), Expect = 2e-35
 Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
             P P   Y+AE+  TW  +++   KL P  AC E                D +P    +
Sbjct: 28  TLPQPLDRYSAEDHATWATLYQRQCKLLPGRACDEFLEGLER----LEVDADRVPDFNKL 83

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL 114
           ++ L  +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EPD  
Sbjct: 84  NEKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVF 137

>1ltz_A Phenylalanine-4-hydroxylase; oxidoreductase, dihydrobiopterin, bacterial enzyme; HET: HBI; 1.40A {Chromobacterium violaceum} SCOP: d.178.1.1 PDB: 1ltv_A 1ltu_A* Length = 297

 Score =  111 bits (279), Expect = 3e-27
 Identities = 41/148 (27%), Positives = 60/148 (40%), Gaps = 19/148 (12%)

Query: 475 YTPE-----PDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVP 529
           Y+ E       +       +P  A   F +     GL  L    + V      N  ++  
Sbjct: 36  YSAEDHATWATLYQRQCKLLPGRACDEFLE-----GLERLEVDADRVPDFNKLNEKLM-- 88

Query: 530 RLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELL 589
                   +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EPDV H+L 
Sbjct: 89  -------AATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLF 141

Query: 590 GHVPLFADPSFAQFSQEIGLASLGAPYL 617
           GHVPL  +P FA + +  G   + A  L
Sbjct: 142 GHVPLLINPVFADYLEAYGKGGVKAKAL 169

>1ltz_A Phenylalanine-4-hydroxylase; oxidoreductase, dihydrobiopterin, bacterial enzyme; HET: HBI; 1.40A {Chromobacterium violaceum} SCOP: d.178.1.1 PDB: 1ltv_A 1ltu_A* Length = 297

 Score = 47.7 bits (113), Expect = 5e-06
 Identities = 5/28 (17%), Positives = 9/28 (32%), Gaps = 1/28 (3%)

Query: 183 ADHPGFTDPVYRARRKY-FADLAFNYKH 209
            D   F  P    R+    +  A ++  
Sbjct: 2   NDRADFVVPDITTRKNVGLSHDANDFTL 29

>2v27_A Phenylalanine hydroxylase; cold adaptation, tetrahydrobiopterin, stability, flexibility, alkaptonuria, oxidoreductase; 1.50A {Colwellia psychrerythraea 34H} PDB: 2v28_A Length = 275

 Score =  132 bits (333), Expect = 8e-35
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 13/149 (8%)

Query: 379 VYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGF 438
           ++  +     D A           E++              D IPQL+++SK LK STG+
Sbjct: 31  LFTRQIACIKDKAC---------DEYHEGLAK----LNLPTDRIPQLDEVSKVLKVSTGW 77

Query: 439 SLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFA 498
              PV  L+   +F   L+ + F    +IR   +  Y  EPD+ HE+ GH PL  + SFA
Sbjct: 78  ECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEPDIFHEIFGHCPLLTNSSFA 137

Query: 499 QFSQEIGLASLGAPDEYVERLATSNNFMI 527
            +++  G   L A  E    LA    F I
Sbjct: 138 NYTEAYGKMGLNATKEQRVFLARLYWFTI 166

>2v27_A Phenylalanine hydroxylase; cold adaptation, tetrahydrobiopterin, stability, flexibility, alkaptonuria, oxidoreductase; 1.50A {Colwellia psychrerythraea 34H} PDB: 2v28_A Length = 275

 Score =  127 bits (320), Expect = 4e-33
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 8/118 (6%)

Query: 1   GEPLPR----VDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQ 56
              +P     ++++ EE   W E+F          AC E++              D IPQ
Sbjct: 8   VSKVPDEHGFIEWSTEENLIWQELFTRQIACIKDKACDEYHEGLAK----LNLPTDRIPQ 63

Query: 57  LEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL 114
           L+++SK LK STG+   PV  L+   +F   L+ + F    +IR   +  Y  EPD  
Sbjct: 64  LDEVSKVLKVSTGWECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEPDIF 121

>2v27_A Phenylalanine hydroxylase; cold adaptation, tetrahydrobiopterin, stability, flexibility, alkaptonuria, oxidoreductase; 1.50A {Colwellia psychrerythraea 34H} PDB: 2v28_A Length = 275

 Score =  106 bits (266), Expect = 7e-26
 Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 19/165 (11%)

Query: 456 LAFRVFHSTQYIRHPSKPLYTPE-----PDVCHELLGHVPLFADPSFAQFSQEIGLASLG 510
           +A    + ++         ++ E      ++    +  +   A   + +     GLA L 
Sbjct: 1   MAKGTKYVSKVPDEHGFIEWSTEENLIWQELFTRQIACIKDKACDEYHE-----GLAKLN 55

Query: 511 APDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYI 570
            P + + +L   +  +           STG+   PV  L+   +F   L+ + F    +I
Sbjct: 56  LPTDRIPQLDEVSKVLK---------VSTGWECYPVPALIGFGEFFRLLSEKKFPVATFI 106

Query: 571 RHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           R   +  Y  EPD+ HE+ GH PL  + SFA +++  G   L A 
Sbjct: 107 RSREEMDYLQEPDIFHEIFGHCPLLTNSSFANYTEAYGKMGLNAT 151

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 56.4 bits (137), Expect = 1e-08
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           +++ + GA+ G GLAA Q+ +AYGL +  + G   G       GA  V +H 
Sbjct: 172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHR 223

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 56.4 bits (137), Expect = 1e-08
 Identities = 18/52 (34%), Positives = 25/52 (48%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           +T+ ++GA  G G AAIQ+ K  G  V A V           +GAD V+   
Sbjct: 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE 212

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 54.5 bits (132), Expect = 3e-08
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDR 169
           + + +  A    G AA+QV +A GL V A+   P  +A    LGA+    +   E+  
Sbjct: 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATY--AEVPE 182

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 54.2 bits (131), Expect = 6e-08
 Identities = 8/52 (15%), Positives = 16/52 (30%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
               +           I + K  G     +V     +A    +GA +V++  
Sbjct: 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEK 217

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 54.1 bits (131), Expect = 6e-08
 Identities = 19/52 (36%), Positives = 30/52 (57%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           D + ++ A  G  +AAIQ+ K +G  V A+ G    + +A  LGAD  V++T
Sbjct: 168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYT 219

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 53.8 bits (130), Expect = 7e-08
 Identities = 19/52 (36%), Positives = 25/52 (48%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
            TL II    G G  A Q+ KAYGL V  +      +     +GAD V++H 
Sbjct: 152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHK 203

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 53.4 bits (129), Expect = 1e-07
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 7/63 (11%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT-------I 164
           D L +       G    Q+ +     + A         +   LGA YV+D +       +
Sbjct: 146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETV 205

Query: 165 REL 167
            EL
Sbjct: 206 MEL 208

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 16/68 (23%), Positives = 20/68 (29%), Gaps = 5/68 (7%)

Query: 112 DTLFII-GANRGNGLAAIQVGKAYGLTVFASVGCPVG----VAKAYGLGADYVVDHTIRE 166
              FI  G     G  A Q+GK       + +         VA    LGA  V+      
Sbjct: 168 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNN 227

Query: 167 LDRFANQI 174
              F   I
Sbjct: 228 SREFGPTI 235

>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3 Length = 267

 Score = 51.4 bits (124), Expect = 3e-07
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLS---- 318
           F+I   H D+ G LA  L  F   N+NL  IESR        Y F V+      ++    
Sbjct: 191 FLITPMH-DKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD--SAITTDIK 247

Query: 319 SVIESLRSSCSYINII 334
            VI  L +    + +I
Sbjct: 248 KVIAILETLDFKVEMI 263

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 18/52 (34%), Positives = 22/52 (42%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           D + I GA+ G G  AIQ  K  G    A V      A    LG D V++  
Sbjct: 222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRA 273

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 51.9 bits (125), Expect = 3e-07
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK----AYGLGADYVVDHT 163
           D++    +N G G A IQ+  A GL     V     + K       LGA++V+   
Sbjct: 169 DSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEE 224

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 51.7 bits (124), Expect = 5e-07
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 4/95 (4%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
           D + I GA+ G G  A Q   A G      V  P        +GA+ ++D        + 
Sbjct: 230 DNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWK 289

Query: 172 NQILSYGSELDADHPGFTDPVYRARRKYFADLAFN 206
           ++     ++   +   F   +         D+ F 
Sbjct: 290 DE----NTQDPKEWKRFGKRIRELTGGEDIDIVFE 320

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 11/52 (21%), Positives = 19/52 (36%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
             + +  A  G G  A+Q+ K     V  +       A    LG D  +++ 
Sbjct: 165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYK 216

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           +++ I G   G G  AIQ+ +A+G  V+A+ G          LGA   +++ 
Sbjct: 169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYR 220

>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens} Length = 313

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 13/99 (13%)

Query: 242 FLLLSQPLIQSCHSCPF--SLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSST 299
           F+L+S+P      +     ++    +    +D  GAL + L  F    VNL  IESR + 
Sbjct: 184 FILVSRPGALPERTGADKTTV----VVPLPEDHPGALMEILDQFASRGVNLSRIESRPTG 239

Query: 300 RIENNYEFMVECAPGGDLS-----SVIESLRSSCSYINI 333
           +   +Y F ++    G  +       +  L         
Sbjct: 240 QYLGHYFFSIDAD--GHATDSRVADALAGLHRISPATRF 276

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYGLGADYVVDH 162
                     + I+G   G G  A+Q+ +    LTV A+   P        LGA +V+DH
Sbjct: 165 NKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDH 224

Query: 163 T 163
           +
Sbjct: 225 S 225

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
           D + I     G G AAIQ+ +  G     + G    +  A  LGA    ++  ++ D F+
Sbjct: 164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNY--KKED-FS 220

Query: 172 NQILSY 177
              L +
Sbjct: 221 EATLKF 226

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 47.6 bits (114), Expect = 7e-06
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           D + + G   G  L  +Q+ KA G  V  +      + +A+ LGAD+ ++  
Sbjct: 191 DRVVVQGTG-GVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRL 241

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 47.8 bits (114), Expect = 7e-06
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
             + I+GA+ G G  AIQV KA+   V A V           LGAD V+D+ 
Sbjct: 185 KRVLILGASGGVGTFAIQVMKAWDAHVTA-VCSQDASELVRKLGADDVIDYK 235

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 47.4 bits (113), Expect = 8e-06
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 86  AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP 145
           AGLA ++           +P    +P  + + G +       +Q+ +  G    A+   P
Sbjct: 140 AGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCS-P 198

Query: 146 VGVAKAYGLGADYVVDHTIRELDRFANQILSYGSE 180
                A   GA+ V D+        A  I +Y   
Sbjct: 199 HNFDLAKSRGAEEVFDYR---APNLAQTIRTYTKN 230

>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis} Length = 329

 Score = 46.5 bits (111), Expect = 2e-05
 Identities = 16/101 (15%), Positives = 28/101 (27%), Gaps = 9/101 (8%)

Query: 242 FLLLSQPLIQSCHSCPFSLFDF------VIFSNHQDEVGALAKTLKLFKKHNVNLLHIES 295
           FL+LS     +                 +         G LA  L +F+   +N+    S
Sbjct: 182 FLVLSPRAEVARLLAKPRAEANVEYESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFIS 241

Query: 296 RSSTRIENNYEFMVEC-APGGD--LSSVIESLRSSCSYINI 333
           R        Y F+V   A   +      +  +     +   
Sbjct: 242 RPIKGRTGTYSFIVTLDAAPWEERFRDALVEIAEHGDWAKT 282

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 9/52 (17%), Positives = 14/52 (26%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
             L    A    G    Q+    G+ +   V            GA +V +  
Sbjct: 173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAA 224

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           D + I     G G  AIQ+ K  G TV  +       A    LGA+  +++ 
Sbjct: 154 DVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRNHAFLKALGAEQCINYH 204

>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls} Length = 283

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSS---- 319
           ++F+   +E G+L + L  F    ++L  IESR S +    Y F  +    G        
Sbjct: 203 IVFA-LPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFI--GHREDQNVH 259

Query: 320 -VIESLRSSCSYINII 334
             +E+LR   + + ++
Sbjct: 260 NALENLREFATMVKVL 275

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 43.4 bits (103), Expect = 2e-04
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
            T+ I G   G G  AIQ+  A G  VFA+      +     LGA  +    
Sbjct: 152 QTVLIQGGGGGVGHVAIQIALARGARVFATAR-GSDLEYVRDLGATPIDASR 202

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 8/52 (15%), Positives = 14/52 (26%), Gaps = 2/52 (3%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
             + I+G          Q+    G  V       +  A A   G  ++    
Sbjct: 144 REVLIVGFG-AVNNLLTQMLNNAGYVVDLVSA-SLSQALAAKRGVRHLYREP 193

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
           ++L +  A  G G+AAIQ+ +  G  V+A+        +A  L  +++     R  D F 
Sbjct: 347 ESLLVHSAAGGVGMAAIQLARHLGAEVYATASED--KWQAVELSREHLASS--RTCD-FE 401

Query: 172 NQIL 175
            Q L
Sbjct: 402 QQFL 405

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           D + I  A  G G   +   +  G TV  +V        A  LG  + ++++
Sbjct: 147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYS 198

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 15/52 (28%), Positives = 21/52 (40%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           +      A  G GL A Q  KA G  +  +VG       A   GA  V+++ 
Sbjct: 142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYR 193

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 11/71 (15%)

Query: 196 RRKY--FADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFF---------YFLL 244
           R+KY  + +          +  + ++ + F  +             F         +F+ 
Sbjct: 61  RKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVN 120

Query: 245 LSQPLIQSCHS 255
              P    CH 
Sbjct: 121 FYSPGCSHCHD 131

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 41.4 bits (98), Expect = 6e-04
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           D + +  A  G GL   Q+ K  G    A       +  A   GA+Y+++ +
Sbjct: 150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINAS 201

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 112 DTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
            TL ++GA  G G  A+Q+ KA  G T+         V  A   GADYV++ +
Sbjct: 172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS 224

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 41.0 bits (97), Expect = 8e-04
 Identities = 16/52 (30%), Positives = 23/52 (44%)

Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163
           + +    A  G G  A Q  KA G  +  +V  P   A A  LGA   +D++
Sbjct: 142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYS 193

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	655
1phz_A	429	Protein (phenylalanine hydroxylase); aromatic amin	100.0
1j8u_A	325	Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1	100.0
1toh_A	343	Tyroh, tyrosine hydroxylase; neurotransmitter bios	100.0
1mlw_A	301	Tryptophan 5-monooxygenase; aromatic amino acid hy	100.0
2v27_A	275	Phenylalanine hydroxylase; cold adaptation, tetrah	100.0
3tk2_A	302	Phenylalanine-4-hydroxylase; protein-substate comp	100.0
2v27_A	275	Phenylalanine hydroxylase; cold adaptation, tetrah	99.96
1mlw_A	301	Tryptophan 5-monooxygenase; aromatic amino acid hy	99.96
1j8u_A	325	Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1	99.95
1toh_A	343	Tyroh, tyrosine hydroxylase; neurotransmitter bios	99.95
3tk2_A	302	Phenylalanine-4-hydroxylase; protein-substate comp	99.95
1phz_A	429	Protein (phenylalanine hydroxylase); aromatic amin	99.94
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	99.87
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	99.87
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	99.86
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	99.86
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	99.85
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	99.85
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	99.85
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	99.84
4eye_A	342	Probable oxidoreductase; structural genomics, niai	99.84
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	99.84
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	99.84
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	99.84
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	99.84
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	99.84
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	99.84
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	99.84
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	99.84
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	99.83
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	99.83
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	99.83
3mwb_A	313	Prephenate dehydratase; L-Phe, PSI, MCSG, structur	99.83
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	99.83
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	99.82
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	99.82
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	99.82
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	99.82
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	99.82
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	99.82
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	99.82
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	99.82
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	99.82
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	99.82
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	99.81
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	99.81
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	99.81
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	99.81
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	99.81
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	99.81
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	99.81
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	99.8
3gms_A	340	Putative NADPH:quinone reductase; structural genom	99.8
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	99.8
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	99.8
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.8
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	99.8
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	99.79
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	99.79
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	99.79
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	99.79
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	99.79
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	99.78
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	99.77
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.76
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	99.76
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	99.76
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	99.75
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	99.75
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	99.75
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	99.75
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	99.74
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	99.74
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	99.74
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	99.74
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	99.74
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	99.73
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	99.72
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	99.72
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	99.71
3luy_A	329	Probable chorismate mutase; structural genomics, A	99.7
2qmx_A	283	Prephenate dehydratase; APC86053, L-Phe inhibition	99.7
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	99.69
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	99.68
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	99.65
2qmw_A	267	PDT, prephenate dehydratase; APC85812, prephenate	99.65
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.6
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.43
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.41
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.33
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.32
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.24
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.17
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.15
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.9
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.78
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.72
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.7
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.69
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.65
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.61
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.61
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.58
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.58
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.56
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.54
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.54
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.51
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.5
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.48
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.47
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.47
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.47
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.45
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.44
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.43
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.41
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.4
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.4
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.39
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.38
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.38
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.38
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.37
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.37
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.36
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.36
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.35
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.35
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.35
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.35
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.33
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.33
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.32
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.31
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.29
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.29
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.29
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.28
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.28
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.28
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.28
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.28
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.28
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.28
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.27
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.26
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.26
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.26
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.25
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.25
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.25
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.25
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.24
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.23
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.23
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.23
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.23
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.23
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.23
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.22
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.22
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.22
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.22
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.21
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.21
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.2
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.2
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.2
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.19
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.19
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.19
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.19
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.18
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.18
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.17
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.17
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.16
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.16
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.15
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.15
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.15
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.15
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.15
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.14
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.14
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.14
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.14
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	97.13
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.13
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.13
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.13
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.12
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.12
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.12
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.11
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.11
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.11
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.11
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.1
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.1
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.1
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.09
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.09
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.09
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.09
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.08
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.08
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.07
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.07
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.07
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.06
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.06
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.05
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.05
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.05
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.04
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.04
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.04
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.04
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.03
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.02
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.02
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.01
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.01
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.01
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.99
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.99
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.99
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.99
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.99
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.98
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.98
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.98
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.98
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.97
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.96
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.95
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.95
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.95
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.94
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.92
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.92
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.91
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.91
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.91
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.91
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.89
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.89
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.89
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.89
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.89
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.89
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.88
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.88
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.88
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.87
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.87
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.87
1spx_A	278	Short-chain reductase family member (5L265); paral	96.87
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.87
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.86
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.86
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.85
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.84
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.84
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.84
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.83
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.82
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.82
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.81
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.8
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.8
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.8
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.79
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.78
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.78
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.78
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.77
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.76
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.76
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.76
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.75
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.75
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.75
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.75
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.75
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.75
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.74
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.72
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.72
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.69
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.68
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.68
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.66
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.66
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.65
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.64
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.63
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.63
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.62
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.62
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.62
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.61
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.61
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.61
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.6
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.6
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.59
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.59
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.59
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.59
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.58
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.57
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.57
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.56
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.56
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.55
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.55
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.54
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.54
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.54
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.53
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.52
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.52
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.51
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.51
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.5
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.48
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.48
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.47
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.47
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.42
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.41
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.4
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.39
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.38
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.38
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.38
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.38
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.37
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.37
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.36
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.35
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.34
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	96.34
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.33
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.33
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.32
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.31
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.3
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.3
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.3
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.29
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.29
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.27
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.23
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.22
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.21
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.18
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.17
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.17
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.15
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.14
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	96.12
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.08
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.08
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	96.07
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.06
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.06
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.04
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.02
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.01
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.01
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	95.98
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.98
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.95
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.95
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	95.93
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.93
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.93
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	95.92
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.92
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.91
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.87
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.86
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.86
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.83
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.83
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.82
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.8
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.8
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.78
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	95.66
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.63
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.62
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.62
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.61
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.6
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.6
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.59
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.58
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.57
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.56
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	95.56
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.55
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.54
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.53
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	95.52
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.47
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.47
2b25_A	336	Hypothetical protein; structural genomics, methyl	95.47
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.44
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	95.42
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	95.41
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	95.41
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	95.38
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.37
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	95.36
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.34
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	95.34
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.33
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.3
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.29
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.29
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	95.26
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.25
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.25
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.24
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.24
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.23
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.23
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.21
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.21
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	95.2
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.18
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.17
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.14
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.13
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.12
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.11
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.07
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.06
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.04
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	95.02
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.0
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	94.97
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.96
3a27_A	272	TYW2, uncharacterized protein MJ1557; wybutosine m	94.95
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	94.95
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	94.95
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	94.9
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	94.9
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	94.84
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	94.82
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	94.81
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	94.81
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	94.81
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.8
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	94.78
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	94.78
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.78
2ko1_A	88	CTR148A, GTP pyrophosphokinase; homodimer, alpha+b	94.77
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	94.76
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	94.72
3lpm_A	259	Putative methyltransferase; structural genomics, p	94.72
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	94.71
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.71
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	94.71
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	94.69
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	94.68
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	94.64
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	94.62
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	94.62
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	94.6
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	94.59
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	94.59
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	94.59
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	94.58
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	94.58
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	94.53
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	94.52
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.52
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	94.51
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	94.49
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	94.48
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	94.47
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.47

>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A

Probab=100.00  E-value=4.9e-102  Score=834.25  Aligned_cols=358  Identities=53%  Similarity=0.827  Sum_probs=319.8

Q ss_pred             CCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHcc-CCcEEEec
Q psy14589        259 SLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSS-CSYINIIS  335 (655)
Q Consensus       259 ~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~-~~~v~iLG  335 (655)
                      .+|||++|+++| +||+|+++|+.|+.+|||||+|||||++...|+|.|||||+.  ++.+++++++|++. +..+++||
T Consensus        32 ~dKTSLiFsl~n-~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~eh~~d~~v~~AL~eL~~~~~~~vkiLG  110 (429)
T 1phz_A           32 NGAISLIFSLKE-EVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSIIKSLRNDIGATVHELS  110 (429)
T ss_dssp             SCCEEEEEEEEC-CTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBCGGGHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred             CCeEEEEEEeCC-CccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEeeCCCHHHHHHHHHHHhhccceEEECC
Confidence            459999999998 899999999999999999999999999999999999999996  56799999999999 99999999


Q ss_pred             CCCCCCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC----------------
Q psy14589        336 RNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL----------------  399 (655)
Q Consensus       336 s~~~~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~----------------  399 (655)
                      ++ +..+++|||||+|+|||+|+|++|+||++|++|||||+|++||+||+|||+||.+||+|++                
T Consensus       111 s~-~~~~~vPWFPR~IsDLDkc~~~vl~yg~~l~~dhpGf~D~~Yr~RR~~ia~ia~~~~~g~~~~~v~Yt~~e~~~W~~  189 (429)
T 1phz_A          111 RD-KEKNTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGT  189 (429)
T ss_dssp             TT-CCTTCEECCCSBGGGGGTTTTCCC------CTTSTTTTCHHHHHHHHHHHHHHHTCCTTSCCCCCCCCHHHHHHHHH
T ss_pred             Cc-CccccCCCCCccccchhhhhhhheeccccccccCCCCCCHHHHHHHHHHHHHHHhCcCCCCCCcccCCHHHHHHHHH
Confidence            95 3457799999999999999999999999999999999999999999999999999999998                


Q ss_pred             ------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeec
Q psy14589        400 ------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYI  467 (655)
Q Consensus       400 ------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~i  467 (655)
                                  ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||
T Consensus       190 l~~~~~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~~vs~~L~~~TGw~~~pV~gli~~~~F~~~LA~r~F~~t~~i  269 (429)
T 1phz_A          190 VFRTLKALYKTHACYEHNHIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYI  269 (429)
T ss_dssp             HHHHHHHHHHHHBCHHHHHHHHHHHHHSCCBTTBCCCHHHHHHHHHHHHSCEEEECSSCCCHHHHHHHHTTTEEEECCCC
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCccCCCCHHHHHHHHHhccCCEEEeccccCCHHHHHHHHhccccceeeee
Confidence                        99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-c
Q psy14589        468 RHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-V  546 (655)
Q Consensus       468 r~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g  546 (655)
                      ||+++|+||||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ |
T Consensus       270 R~~~~~~YtpEPDi~He~~GH~PlL~~p~fA~f~q~~G~~~l~a~~~~i~~LarlyWfTVEFGLi~~~-----~~lk~YG  344 (429)
T 1phz_A          270 RHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEG-----DSIKAYG  344 (429)
T ss_dssp             CCTTCTTCCSSCCHHHHHHHTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTTTCEEEET-----TEEEECC
T ss_pred             cCccccccCCCcchhHHHhcccccccCHHHHHHHHHHHHHhcCCCHHHHHHHhhhheeeeeeceeccC-----Cceeeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999     99999 9


Q ss_pred             ccccCCHHHHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEE
Q psy14589        547 AGLLSSRDFLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFY  619 (655)
Q Consensus       547 ~Gllss~~~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~  619 (655)
                      ||||||.+|++|...     +.|-...-+|+++.++-.+.           -++.-++|.+..+.+.  ...++.||.+.
T Consensus       345 AGlLSS~gE~~~~ls~~p~~~pfd~~~~~~~~y~i~~~Qp-----------~yFv~~sf~~l~~~~~~f~~~~~~pf~~~  413 (429)
T 1phz_A          345 AGLLSSFGELQYCLSDKPKLLPLELEKTACQEYSVTEFQP-----------LYYVAESFSDAKEKVRTFAATIPRPFSVR  413 (429)
T ss_dssp             HHHHTCHHHHHHHTSSSSEEEECCHHHHTTCCCCSSSSCS-----------EEEEESCHHHHHHHHHHHHTTSCCSSEEE
T ss_pred             cccccChhHHHHhcCCCCeeccCCHHHHcCCCCCCCCccc-----------ceEEeCCHHHHHHHHHHHHHhCCCCccee
Confidence            999999999999953     35544445555555433331           1333444444444433  24579999999


Q ss_pred             eecccccCccccccCch
Q psy14589        620 YVCHELLGHVPLFADPS  636 (655)
Q Consensus       620 ~~~~~~~~~~~~~~~~~  636 (655)
                      |  +++|++|-|+|++.
T Consensus       414 y--~~~t~~~~~~~~~~  428 (429)
T 1phz_A          414 Y--DPYTQRVEVLDNTQ  428 (429)
T ss_dssp             E--ETTTTEEEEECCC-
T ss_pred             e--CCCccEEEecCCCC
Confidence            9  99999999999874

>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A*

Probab=100.00  E-value=1e-87  Score=691.81  Aligned_cols=277  Identities=57%  Similarity=0.897  Sum_probs=248.3

Q ss_pred             CCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC---------------------
Q psy14589        341 FHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL---------------------  399 (655)
Q Consensus       341 ~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~---------------------  399 (655)
                      ..++|||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++                     
T Consensus        13 ~~~~pwfpr~i~dld~~~~~~~~~~~~l~~dhpgf~D~~Yr~RR~~~a~~a~~y~~g~~~~~v~YT~eE~~~W~~l~~r~   92 (325)
T 1j8u_A           13 KDTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYMEEEKKTWGTVFKTL   92 (325)
T ss_dssp             ---CCCCCSBGGGGGGGGGSSCSSCGGGSTTSTTTTCHHHHHHHHHHHHHHHHCCTTSCCCCCCCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHhhhchheeccCccCCCCCCCCCHHHHHHHHHHHHHHHhCcCCCCCCcccCCHHHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999999999999999999999999998                     


Q ss_pred             -------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCC
Q psy14589        400 -------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSK  472 (655)
Q Consensus       400 -------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~  472 (655)
                             ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++
T Consensus        93 ~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~F~~~LA~R~Fp~tqyIR~~~~  172 (325)
T 1j8u_A           93 KSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSK  172 (325)
T ss_dssp             HHHHHHHBCHHHHHHHHHHHHHHCCBTTBCCCHHHHHHHHHHHHSCEEEECCSCCCHHHHHHHHHTTEEEECCCCCCTTC
T ss_pred             HHHhhhhhhHHHHHHHHHHHHhcCCCccCCCCHHHHHHHHHhccCCEEEeccccCCHHHHHHHHhcCccceeeeecCccc
Confidence                   9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccC
Q psy14589        473 PLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLS  551 (655)
Q Consensus       473 ~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Glls  551 (655)
                      |+||||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ ||||||
T Consensus       173 ~~YtpEPDifHEl~GHvPlLadP~FA~f~q~~G~~~l~As~~~i~~LarlYWfTVEFGLi~e~-----g~lkaYGAGlLS  247 (325)
T 1j8u_A          173 PMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQG-----DSIKAYGAGLLS  247 (325)
T ss_dssp             TTCCSSCCHHHHHHHTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCEEEET-----TEEEECCHHHHT
T ss_pred             cCCCCCchhHHHHhcccccccCHHHHHHHHHHHHHhcCCCHHHHHHHhhheeeeeeeeeeccC-----CceEEecceeec
Confidence            999999999999999999999999999999999999999999999999999999999999999     99999 999999


Q ss_pred             CHHHHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeeccc
Q psy14589        552 SRDFLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHE  624 (655)
Q Consensus       552 s~~~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~  624 (655)
                      |.+|++|+..     +.|-+..-+|+++.++-.+.           -++.-++|.+..+.+.  ...++.||.++|  |+
T Consensus       248 S~GEl~~als~~p~~~pfd~~~~~~t~Y~I~~~Qp-----------~YFV~~Sfe~l~~~l~~fa~~~~rpf~~~y--~~  314 (325)
T 1j8u_A          248 SFGELQYCLSEKPKLLPLELEKTAIQNYTVTEFQP-----------LYYVAESFNDAKEKVRNFAATIPRPFSVRY--DP  314 (325)
T ss_dssp             CHHHHHHHTSSSSEEEECCHHHHTTCCCCSSSCCS-----------EEEEESCHHHHHHHHHHHHTTSCCSSCEEE--ET
T ss_pred             ChhHHHHhcCCCCeeccCCHHHHcCCCCCCCCccc-----------ceEEeCCHHHHHHHHHHHHHhCCCCceeee--CC
Confidence            9999999973     45655555555555443331           1344455555554444  345799999999  99


Q ss_pred             ccCccccccCc
Q psy14589        625 LLGHVPLFADP  635 (655)
Q Consensus       625 ~~~~~~~~~~~  635 (655)
                      +|++|-|+|++
T Consensus       315 ~t~~v~~~~~~  325 (325)
T 1j8u_A          315 YTQRIEVLDNT  325 (325)
T ss_dssp             TTTEEEEC---
T ss_pred             CCceEEecCCC
Confidence            99999999975

>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A

Probab=100.00  E-value=2.7e-87  Score=692.97  Aligned_cols=278  Identities=47%  Similarity=0.780  Sum_probs=241.1

Q ss_pred             CCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC---------------------
Q psy14589        341 FHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL---------------------  399 (655)
Q Consensus       341 ~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~---------------------  399 (655)
                      ..++|||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++                     
T Consensus         6 ~~~~pwfpr~i~dld~~~~~~~~~~~~l~~dHpgf~D~~Yr~RR~~~a~~a~~y~~g~~~p~v~YT~eE~~~W~~l~~r~   85 (343)
T 1toh_A            6 EDKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHVEYTAEEIATWKEVYVTL   85 (343)
T ss_dssp             --CCCCCCSBGGGGGGC-----------CTTSTTTTCHHHHHHHHHHHHHHHHCCTTSCCCCCCCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHhhhchheeccCccCCCCCCCCCHHHHHHHHHHHHHHHhCcCCCCCCcCCCCHHHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999999999999999999999999998                     


Q ss_pred             -------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCC
Q psy14589        400 -------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSK  472 (655)
Q Consensus       400 -------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~  472 (655)
                             ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++
T Consensus        86 ~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~RvFp~tqyIR~~~~  165 (343)
T 1toh_A           86 KGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASS  165 (343)
T ss_dssp             HHHHHHHBCHHHHHHHHHHHHHSCCBTTBCCCHHHHHHHHHHHTSCEEEECSSCCCHHHHHHHHTTTEEEECCCCCCTTC
T ss_pred             HHHhhhhhHHHHHHHHHHHHHhcCCCccCCCCHHHHHHHHHhccCCEEEecCccCCHHHHHHHHhccccceeeeecCccc
Confidence                   9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccC
Q psy14589        473 PLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLS  551 (655)
Q Consensus       473 ~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Glls  551 (655)
                      |+||||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ ||||||
T Consensus       166 ~~YtpEPDifHElfGHvPlLadP~FA~f~q~~G~~~l~As~~~i~~LarlYWfTVEFGLi~e~-----g~lKaYGAGlLS  240 (343)
T 1toh_A          166 PMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQN-----GELKAYGAGLLS  240 (343)
T ss_dssp             TTCCSSCCHHHHHHHTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTTTCEEEET-----TEEEECCHHHHT
T ss_pred             cCCCCCchhHHHHhcccccccCHHHHHHHHHHHHHhcCCCHHHHHHHhhheeeeeecceeccC-----CceEEecccccC
Confidence            999999999999999999999999999999999999999999999999999999999999999     99999 999999


Q ss_pred             CHHHHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeeccc
Q psy14589        552 SRDFLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHE  624 (655)
Q Consensus       552 s~~~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~  624 (655)
                      |.+|++|...     +.|-+..-+|+++.++-.+.           -++.-++|.+..+.+.  ...++.||.++|  |+
T Consensus       241 S~GEl~~als~~p~~~pfd~~~~~~t~Y~I~~~Qp-----------~YFV~eSfe~l~e~l~~fa~~~~rpf~~~y--~p  307 (343)
T 1toh_A          241 SYGELLHSLSEEPEVRAFDPDTAAVQPYQDQTYQP-----------VYFVSESFNDAKDKLRNYASRIQRPFSVKF--DP  307 (343)
T ss_dssp             CHHHHHHHTSSSSEEEECCHHHHHTCCCCSSSCCS-----------EEEEESCHHHHHHHHHHHHHTSCCSCEEEE--ET
T ss_pred             chHHHHHHcCCCCcccCCCHHHHcCCCCCCCCCcc-----------ceEEeCCHHHHHHHHHHHHHhCCCCceeee--CC
Confidence            9999999972     45655555555555433331           1344445555554444  345799999999  99


Q ss_pred             ccCccccccCch
Q psy14589        625 LLGHVPLFADPS  636 (655)
Q Consensus       625 ~~~~~~~~~~~~  636 (655)
                      +|++|-|+|+++
T Consensus       308 ~t~~i~~l~~~~  319 (343)
T 1toh_A          308 YTLAIDVLDSPH  319 (343)
T ss_dssp             TTTEEEEECSHH
T ss_pred             CcceEEecCCHH
Confidence            999999999985

>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A*

Probab=100.00  E-value=2.3e-85  Score=670.51  Aligned_cols=263  Identities=56%  Similarity=0.879  Sum_probs=231.4

Q ss_pred             CCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC----------------------
Q psy14589        342 HGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL----------------------  399 (655)
Q Consensus       342 ~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~----------------------  399 (655)
                      ++||||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++                      
T Consensus         2 ~~~~wfp~~~~dld~~~~~~~~~~~~l~~dhpgf~D~~Yr~RR~~~a~~a~~y~~g~~~p~v~YT~eE~~~W~~l~~r~~   81 (301)
T 1mlw_A            2 ESVPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKVEFTEEEIKTWGTVFRELN   81 (301)
T ss_dssp             -CCCCCCSSGGGGGGTTTCCCBCSSCCCTTSTTTTCHHHHHHHHHHHHHHHHCCTTSCCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHhhhhhheeccCcCCCCCCCCCCHHHHHHHHHHHHHHHhCcCCCCCCcccCCHHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999999999999999998                      


Q ss_pred             ------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCC
Q psy14589        400 ------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP  473 (655)
Q Consensus       400 ------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~  473 (655)
                            ||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++|
T Consensus        82 ~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~F~~~LA~R~Fp~t~yIR~~~~~  161 (301)
T 1mlw_A           82 KLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDP  161 (301)
T ss_dssp             HHHHHHBCHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHTSCEEEECSSBCCHHHHHHHHTTTEEEECCCCCCTTCT
T ss_pred             HHHhhhhhHHHHHHHHHHHHhcCCCccCCCCHHHHHHHHHhccCCEEEecCccCCHHHHHHHHhcCccceeeeecCcccc
Confidence                  99999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCC
Q psy14589        474 LYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSS  552 (655)
Q Consensus       474 ~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss  552 (655)
                      +||||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ |||||||
T Consensus       162 ~YtpEPDi~HEl~GHvPlLadP~FA~f~q~~G~~~l~as~~~i~~LarlYWfTVEFGLi~e~-----~~lkaYGAGlLSS  236 (301)
T 1mlw_A          162 FYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQD-----GQLRVFGAGLLSS  236 (301)
T ss_dssp             TCCSSCCHHHHHHHTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTTTCEEEET-----TEEEECCHHHHTC
T ss_pred             CCCCCchhHHHHhcccccccCHHHHHHHHHHHHHhcCCCHHHHHHHhhhheeeeecceeccC-----CceEEeccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999     99999 9999999


Q ss_pred             HHHHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEe
Q psy14589        553 RDFLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYY  620 (655)
Q Consensus       553 ~~~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~  620 (655)
                      .+|++|...     +.|-+..-+|+++.++-.+           =-++.-++|.+..+.+.  ...++.||.++|
T Consensus       237 ~gEl~~als~~p~~~pfd~~~~~~t~Y~I~~~Q-----------p~YFV~~Sfe~l~~~~~~fa~~~~rpf~~~y  300 (301)
T 1mlw_A          237 ISELKHALSGHAKVKPFDPKITCKQECLITTFQ-----------DVYFVSESFEDAKEKMREFTKTIKRPFGVKY  300 (301)
T ss_dssp             HHHHHHHTSTTSEEEECCHHHHTTSCCCSSSCC-----------SEEEECSCHHHHHHHHHHHHTTC--------
T ss_pred             hHHHHHHcCCCCeecCCCHHHHcCCCCCCCCCc-----------cceEEECCHHHHHHHHHHHHHhCCCCcceeC
Confidence            999999973     4565555555555544333           12344455555555444  345789999988

>2v27_A Phenylalanine hydroxylase; cold adaptation, tetrahydrobiopterin, stability, flexibility, alkaptonuria, oxidoreductase; 1.50A {Colwellia psychrerythraea 34H} PDB: 2v28_A

Probab=100.00  E-value=5.7e-60  Score=478.69  Aligned_cols=232  Identities=25%  Similarity=0.295  Sum_probs=195.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChH
Q psy14589        371 DHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSR  450 (655)
Q Consensus       371 dhpgf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~  450 (655)
                      ....+|++|-.-=|....++...|+  ..||++|++|+++|    |+++|+||||+|||++|+++|||+++||+||||++
T Consensus        16 ~~~~YT~eE~~~W~~l~~r~~~l~~--~~Ac~eyl~gl~~L----gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~   89 (275)
T 2v27_A           16 GFIEWSTEENLIWQELFTRQIACIK--DKACDEYHEGLAKL----NLPTDRIPQLDEVSKVLKVSTGWECYPVPALIGFG   89 (275)
T ss_dssp             SCCCCCHHHHHHHHHHHHHHHHHHT--TTBCHHHHHHHHHH----CCCSSSCCCHHHHHHHHHHHHSCEEEEECSCCCHH
T ss_pred             CcccCCHHHHHHHHHHHHHHHHHhh--hhhhHHHHHHHHHc----CCCCCCCCCHHHHHHHHHhccCCEEeeccccCCHH
Confidence            4557888887777777777777663  46999999999999    99999999999999999999999999999999999


Q ss_pred             HHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhh
Q psy14589        451 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPR  530 (655)
Q Consensus       451 ~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~g  530 (655)
                      +||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+++++++++++.+|+||||||||||
T Consensus        90 ~Ff~~LA~R~Fp~t~yIR~~~~~~YtpEPDifHEl~GHvPlLadP~FA~f~q~~G~~~l~A~~~~~~~LarlYWfTVEFG  169 (275)
T 2v27_A           90 EFFRLLSEKKFPVATFIRSREEMDYLQEPDIFHEIFGHCPLLTNSSFANYTEAYGKMGLNATKEQRVFLARLYWFTIEFG  169 (275)
T ss_dssp             HHHHHHHTTEEEEECCCCCSTTTTCCSSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHhcCccceeeeecCcccccCCCcchhHHHHhcchHhhcCHHHHHHHHHHHHHHhCCCHHHHHHHhhhhheeeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCCeEee-cccccCCHHHHHhhhc------ccccccc-----cccCCCCCCCCCCcchhhhhcCCcccccCc
Q psy14589        531 LASLSPDSTGFSLRP-VAGLLSSRDFLAGLAF------RVFHSTQ-----YIRHPSKPLYTPEPDVCHELLGHVPLFADP  598 (655)
Q Consensus       531 l~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~------~~f~~~~-----~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p  598 (655)
                      ||+++     +++|+ |||||||.+|++|+.+      +.|-+..     |..+..|+.|.+ -|.|.|++--+.- .-+
T Consensus       170 Li~e~-----~~lkaYGAGiLSS~gEl~~al~s~~p~~~pfd~~~~~~t~Y~I~~~Qp~YFv-~~sfe~l~~~~~~-~~~  242 (275)
T 2v27_A          170 LLDTP-----KGLRIYGGGVLSSPGETDYAMNNTDVDRKPFDILDVLRTPYRIDIMQPIYYM-LTKVSDLDEIRKF-EVD  242 (275)
T ss_dssp             EEEET-----TEEEECCHHHHTCHHHHHHHHHCSSCEEEECCHHHHHTCCCCTTSCCSEEEE-ESSGGGGHHHHHS-CHH
T ss_pred             eecCC-----CceEEeccchhcCHHHHHHHhcCCCCeeccCCHHHHhCCCCCCCCCCCCeEE-eCCHHHHHHHHhh-hhh
Confidence            99999     99999 9999999999999871      3554444     444455556666 3666666443320 003


Q ss_pred             hHHHHHHHHhhcccCCc
Q psy14589        599 SFAQFSQEIGLASLGAP  615 (655)
Q Consensus       599 ~f~~~~~~~g~~~~~a~  615 (655)
                      .|+.+.++....|+-+|
T Consensus       243 d~~~~~~~~~~~gl~~p  259 (275)
T 2v27_A          243 DIMELVAQAEALGLHEA  259 (275)
T ss_dssp             HHHHHHHHHHHHCCCCC
T ss_pred             hHHHHHHHHHhcCCCCC
Confidence            44445555555555443

>3tk2_A Phenylalanine-4-hydroxylase; protein-substate complex, mixed alpha, beta, tetrahydrobiopterin, iron (II), molecular OX hydroxylation; HET: PHE; 1.35A {Chromobacterium violaceum} PDB: 3tk4_A 3tcy_A* 1ltz_A* 1ltv_A 1ltu_A*

Probab=100.00  E-value=4.3e-61  Score=493.33  Aligned_cols=227  Identities=25%  Similarity=0.343  Sum_probs=190.3

Q ss_pred             CCCCCCCCCHHHHHHHH-HHHHHHhccCCCCC--------------------------cchhHHhhhhHHHHhcCCCCCC
Q psy14589        369 DADHPGFTDPVYRARRK-YFADLAFNYKHSIL--------------------------LMPEHNHVFPLLIQNCGYAEDN  421 (655)
Q Consensus       369 ~~dhpgf~D~~y~~rR~-~ia~ia~~~k~g~~--------------------------Ac~ey~~g~~~l~~~~g~~~~~  421 (655)
                      .+|||+|.+++|+.||+ -++..+.+|...++                          ||++|++|+++|    |++.|+
T Consensus         6 ~~~~~~f~~~~~~~r~~~~~~~~a~dy~~pqp~~~YT~~E~~~W~~l~~r~~~l~~~~Ac~eyl~gl~~l----~~~~d~   81 (302)
T 3tk2_A            6 MNDRADFVVPDITTRKNVGLSHDANDFTLPQPLDRYSAEDHATWATLYQRQCKLLPGRACDEFMEGLERL----EVDADR   81 (302)
T ss_dssp             ------CCCCCHHHHHTTTCCCCTTTCCCCCCGGGCCHHHHHHHHHHHHHHHHHCTTTBCHHHHHHHHHT----TCCSSS
T ss_pred             cCCCCCCcchhhhhhcccccchhhhcCcCCCCcccCCHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHc----CCCccc
Confidence            46899999999987775 35556666666655                          999999999998    999999


Q ss_pred             CCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHH
Q psy14589        422 IPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFS  501 (655)
Q Consensus       422 Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~  501 (655)
                      ||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+
T Consensus        82 IPql~~vn~~L~~~TGw~l~pV~Gli~~~~Ff~~LA~R~Fp~t~~IR~~~~~~YtpEPDifHEl~GHvPlLanp~fA~f~  161 (302)
T 3tk2_A           82 VPDFNKLNQKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLINPVFADYL  161 (302)
T ss_dssp             CCCHHHHHHHHHHHHSCEEEEESSSCCHHHHHHHHHTTEEEEECCCCCGGGTTCCSSCCHHHHHHHHSGGGGSHHHHHHH
T ss_pred             CCCHHHHHHHHHhhcCcEEEecCccCCHHHHHHHHhcCcccCcccccCCCcCCCCCCCccccchhcccccccCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCh-HHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHHHHhhhc------cccccc-----c
Q psy14589        502 QEIGLASLGAPD-EYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDFLAGLAF------RVFHST-----Q  568 (655)
Q Consensus       502 ~~~Gl~~l~~~~-~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~------~~f~~~-----~  568 (655)
                      |++|++++++++ +++.+|+||||||||||||+++     +++|+ |||||||.+|+.|+.+      +.|-+.     .
T Consensus       162 q~~G~~~l~A~~~~~i~~LarlyWfTVEFGLi~~~-----~~~kiYGAGlLSS~gE~~~~l~s~~p~~~pfd~~~~~~~~  236 (302)
T 3tk2_A          162 EAYGKGGVKAKALGALPMLARLYWYTVEFGLINTP-----AGMRIYGAGILSSKSESIYCLDSASPNRVGFDLMRIMNTR  236 (302)
T ss_dssp             HHHHHTHHHHHHTTCHHHHHHHHHHTTTTCEECCT-----TCCEECCHHHHTCSSHHHHHHHCSSSEEEECCHHHHHTBC
T ss_pred             HHHHHHhhccCCHHHHHHhhheeEEEEEEEEEecC-----CceEEEeeeccCCHHHHHHHhcCCCCcccCCCHHHHhcCC
Confidence            999999999966 6799999999999999999999     99999 9999999999999862      245443     3


Q ss_pred             cccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhh
Q psy14589        569 YIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGL  609 (655)
Q Consensus       569 ~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~  609 (655)
                      |..+..|+.|.. -|.|-+++--+    .+-|+...++++.
T Consensus       237 y~i~~~Qp~yFv-~~sfe~L~d~~----~~df~~l~~~~~~  272 (302)
T 3tk2_A          237 YRIDTFQKTYFV-IDSFKQLFDAT----APDFAPLYLQLAD  272 (302)
T ss_dssp             CCSSSCCSEEEE-ESCHHHHHHHT----CSCCHHHHHHHHT
T ss_pred             CCcCCCCCCeEE-eCCHHHHHHHH----HHhHHHHHHHhhh
Confidence            555566666666 36666665433    3445666666543

>2v27_A Phenylalanine hydroxylase; cold adaptation, tetrahydrobiopterin, stability, flexibility, alkaptonuria, oxidoreductase; 1.50A {Colwellia psychrerythraea 34H} PDB: 2v28_A

Probab=99.96  E-value=8.9e-32  Score=272.75  Aligned_cols=130  Identities=27%  Similarity=0.428  Sum_probs=112.1

Q ss_pred             CCCCCCCCchhhhhhcC--------CCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCe
Q psy14589        471 SKPLYTPEPDVCHELLG--------HVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFS  542 (655)
Q Consensus       471 ~~~~y~~epd~~He~~g--------h~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~  542 (655)
                      ...+||+|-   |++=+        -.|=.|-++|-     .|+..||++.++||+|.++|         +.+.++|||+
T Consensus        16 ~~~~YT~eE---~~~W~~l~~r~~~l~~~~Ac~eyl-----~gl~~Lgl~~d~IPql~dvn---------~~L~~~TGw~   78 (275)
T 2v27_A           16 GFIEWSTEE---NLIWQELFTRQIACIKDKACDEYH-----EGLAKLNLPTDRIPQLDEVS---------KVLKVSTGWE   78 (275)
T ss_dssp             SCCCCCHHH---HHHHHHHHHHHHHHHTTTBCHHHH-----HHHHHHCCCSSSCCCHHHHH---------HHHHHHHSCE
T ss_pred             CcccCCHHH---HHHHHHHHHHHHHHhhhhhhHHHH-----HHHHHcCCCCCCCCCHHHHH---------HHHHhccCCE
Confidence            446888887   55522        22333333333     36667789999999999999         6677889999


Q ss_pred             EeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceE
Q psy14589        543 LRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYL  617 (655)
Q Consensus       543 ~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~  617 (655)
                      +++|+||||+..||++||+|+||+|+|||++++++|+||||+|||+|||||||+||+||+|+|+||++|++|+..
T Consensus        79 ~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~YtpEPDifHEl~GHvPlLadP~FA~f~q~~G~~~l~A~~~  153 (275)
T 2v27_A           79 CYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEPDIFHEIFGHCPLLTNSSFANYTEAYGKMGLNATKE  153 (275)
T ss_dssp             EEEECSCCCHHHHHHHHHTTEEEEECCCCCSTTTTCCSSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHTTCCHH
T ss_pred             EeeccccCCHHHHHHHHhcCccceeeeecCcccccCCCcchhHHHHhcchHhhcCHHHHHHHHHHHHHHhCCCHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999864

>1mlw_A Tryptophan 5-monooxygenase; aromatic amino acid hydroxylase catalytic domain fold, oxidoreductase; HET: HBI; 1.71A {Homo sapiens} SCOP: d.178.1.1 PDB: 3hf6_A* 3hf8_A* 3hfb_A* 3e2t_A*

Probab=99.96  E-value=9.2e-31  Score=267.95  Aligned_cols=148  Identities=51%  Similarity=0.801  Sum_probs=118.7

Q ss_pred             HHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcC----CCChHHHHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASL----GAPDEYVERL  519 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l----~~~~~~i~~l  519 (655)
                      |..++.+|..-=+ .   -.....+||+|-   |++   +-.|.......+..      ..|+..|    |++.++||+|
T Consensus        44 R~~~a~~a~~y~~-g---~~~p~v~YT~eE---~~~---W~~l~~r~~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IPql  113 (301)
T 1mlw_A           44 RKYFADLAMNYKH-G---DPIPKVEFTEEE---IKT---WGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQL  113 (301)
T ss_dssp             HHHHHHHHHHCCT-T---SCCCCCCCCHHH---HHH---HHHHHHHHHHHHHHHBCHHHHHHHHHHHHHHTCBTTBCCCH
T ss_pred             HHHHHHHHHhCcC-C---CCCCcccCCHHH---HHH---HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccCCCCH
Confidence            6678888764211 0   011236799988   666   32333333333222      2255444    8999999999


Q ss_pred             HhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCch
Q psy14589        520 ATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS  599 (655)
Q Consensus       520 ~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~  599 (655)
                      .++|         +.+.++|||++++|+||||+..||++||+|+||+|+|||++++++|+||||+|||+|||||||+||+
T Consensus       114 ~dvn---------~~L~~~TGw~~~pV~Gli~~~~F~~~LA~R~Fp~t~yIR~~~~~~YtpEPDi~HEl~GHvPlLadP~  184 (301)
T 1mlw_A          114 EDVS---------NFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPS  184 (301)
T ss_dssp             HHHH---------HHHHHHTSCEEEECSSBCCHHHHHHHHTTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHHTSHH
T ss_pred             HHHH---------HHHHhccCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCCCCchhHHHHhcccccccCHH
Confidence            9999         6677889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCce
Q psy14589        600 FAQFSQEIGLASLGAPY  616 (655)
Q Consensus       600 f~~~~~~~g~~~~~a~~  616 (655)
                      ||+|+|+||++|++|+.
T Consensus       185 FA~f~q~~G~~~l~as~  201 (301)
T 1mlw_A          185 FAQFSQEIGLASLGASE  201 (301)
T ss_dssp             HHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHhcCCCH
Confidence            99999999999999974

>1j8u_A Phenylalanine-4-hydroxylase; ferrous iron, 2-His-1-carboxylate facial triad, tetrahydrobiopterin, oxidoreductase; HET: H4B; 1.50A {Homo sapiens} SCOP: d.178.1.1 PDB: 1j8t_A* 1kw0_A* 1lrm_A* 1mmk_A* 1mmt_A* 4anp_A* 2pah_A 1pah_A 3pah_A* 4pah_A* 5pah_A* 6pah_A* 1tdw_A 1tg2_A* 1dmw_A*

Probab=99.95  E-value=1.2e-30  Score=268.80  Aligned_cols=146  Identities=53%  Similarity=0.844  Sum_probs=119.2

Q ss_pred             HHHHHhhhcCccceeeeccCCC--CCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcC----CCChHHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHPS--KPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASL----GAPDEYVE  517 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~~--~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l----~~~~~~i~  517 (655)
                      |..++.+|..      |--...  ..+||+|-   |++   +-.|.......+..      ..|+..|    |++.++||
T Consensus        56 R~~~a~~a~~------y~~g~~~~~v~YT~eE---~~~---W~~l~~r~~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IP  123 (325)
T 1j8u_A           56 RKQFADIAYN------YRHGQPIPRVEYMEEE---KKT---WGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIP  123 (325)
T ss_dssp             HHHHHHHHHH------CCTTSCCCCCCCCHHH---HHH---HHHHHHHHHHHHHHHBCHHHHHHHHHHHHHHCCBTTBCC
T ss_pred             HHHHHHHHHh------CcCCCCCCcccCCHHH---HHH---HHHHHHHHHHHhhhhhhHHHHHHHHHHHHhcCCCccCCC
Confidence            6788888763      222222  24899998   666   33333333333222      2355444    89999999


Q ss_pred             HHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccC
Q psy14589        518 RLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD  597 (655)
Q Consensus       518 ~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~  597 (655)
                      +|.++|         +.+.++|||++++|+||||+..||++||+|+||+|+|||++++++|+||||+|||+|||||||+|
T Consensus       124 ql~dvn---------~~L~~~TGw~~~pV~Gli~~~~F~~~LA~R~Fp~tqyIR~~~~~~YtpEPDifHEl~GHvPlLad  194 (325)
T 1j8u_A          124 QLEDVS---------QFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSD  194 (325)
T ss_dssp             CHHHHH---------HHHHHHHSCEEEECCSCCCHHHHHHHHHTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHHTS
T ss_pred             CHHHHH---------HHHHhccCCEEEeccccCCHHHHHHHHhcCccceeeeecCccccCCCCCchhHHHHhcccccccC
Confidence            999999         66778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcccCCce
Q psy14589        598 PSFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       598 p~f~~~~~~~g~~~~~a~~  616 (655)
                      |+||+|+|+||++|++|+.
T Consensus       195 P~FA~f~q~~G~~~l~As~  213 (325)
T 1j8u_A          195 RSFAQFSQEIGLASLGAPD  213 (325)
T ss_dssp             HHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHHHhcCCCH
Confidence            9999999999999999974

>1toh_A Tyroh, tyrosine hydroxylase; neurotransmitter biosynthesis, non-heme iron, P substrate; 2.30A {Rattus norvegicus} SCOP: d.178.1.1 PDB: 2toh_A* 2xsn_A

Probab=99.95  E-value=1.8e-30  Score=269.11  Aligned_cols=146  Identities=49%  Similarity=0.766  Sum_probs=119.0

Q ss_pred             HHHHHhhhcCccceeeeccCCC--CCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhh----cCCCChHHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHPS--KPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLA----SLGAPDEYVE  517 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~~--~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~----~l~~~~~~i~  517 (655)
                      |..++.+|..      |--...  ..+||+|-   |++   +-.|.......+..      ..|+.    .+|++.++||
T Consensus        49 R~~~a~~a~~------y~~g~~~p~v~YT~eE---~~~---W~~l~~r~~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IP  116 (343)
T 1toh_A           49 RKLIAEIAFQ------YKHGEPIPHVEYTAEE---IAT---WKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIP  116 (343)
T ss_dssp             HHHHHHHHHH------CCTTSCCCCCCCCHHH---HHH---HHHHHHHHHHHHHHHBCHHHHHHHHHHHHHSCCBTTBCC
T ss_pred             HHHHHHHHHh------CcCCCCCCcCCCCHHH---HHH---HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCccCCC
Confidence            6788888764      222222  23899998   666   32333333333222      22443    3489999999


Q ss_pred             HHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccC
Q psy14589        518 RLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD  597 (655)
Q Consensus       518 ~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~  597 (655)
                      +|.++|         +.+.+.|||++++|+||||+..||++||+|+||+|+|||++++++|+||||+|||+|||||||+|
T Consensus       117 ql~dvn---------~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~RvFp~tqyIR~~~~~~YtpEPDifHElfGHvPlLad  187 (343)
T 1toh_A          117 QLEDVS---------RFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLAD  187 (343)
T ss_dssp             CHHHHH---------HHHHHHTSCEEEECSSCCCHHHHHHHHTTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHHTS
T ss_pred             CHHHHH---------HHHHhccCCEEEecCccCCHHHHHHHHhccccceeeeecCccccCCCCCchhHHHHhcccccccC
Confidence            999999         66778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcccCCce
Q psy14589        598 PSFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       598 p~f~~~~~~~g~~~~~a~~  616 (655)
                      |+||+|+|+||++|++|+.
T Consensus       188 P~FA~f~q~~G~~~l~As~  206 (343)
T 1toh_A          188 RTFAQFSQDIGLASLGASD  206 (343)
T ss_dssp             HHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHHHhcCCCH
Confidence            9999999999999999974

>3tk2_A Phenylalanine-4-hydroxylase; protein-substate complex, mixed alpha, beta, tetrahydrobiopterin, iron (II), molecular OX hydroxylation; HET: PHE; 1.35A {Chromobacterium violaceum} PDB: 3tk4_A 3tcy_A* 1ltz_A* 1ltv_A 1ltu_A*

Probab=99.95  E-value=2.3e-30  Score=265.90  Aligned_cols=136  Identities=29%  Similarity=0.454  Sum_probs=112.7

Q ss_pred             eccCCCCCCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCC
Q psy14589        466 YIRHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTG  540 (655)
Q Consensus       466 ~ir~~~~~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg  540 (655)
                      |+=......||+|-     .++.....-.|=.+.++|-     .|+..||++.++||+|.++|         +.+.++||
T Consensus        32 y~~pqp~~~YT~~E~~~W~~l~~r~~~l~~~~Ac~eyl-----~gl~~l~~~~d~IPql~~vn---------~~L~~~TG   97 (302)
T 3tk2_A           32 FTLPQPLDRYSAEDHATWATLYQRQCKLLPGRACDEFM-----EGLERLEVDADRVPDFNKLN---------QKLMAATG   97 (302)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHHHHHHHCTTTBCHHHH-----HHHHHTTCCSSSCCCHHHHH---------HHHHHHHS
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHhhchhhHHHH-----HHHHHcCCCcccCCCHHHHH---------HHHHhhcC
Confidence            44333344688887     1222222333444444433     36677789999999999999         66678899


Q ss_pred             CeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCc
Q psy14589        541 FSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP  615 (655)
Q Consensus       541 ~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~  615 (655)
                      |++++|+||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+||+||+|+|+||++|++|+
T Consensus        98 w~l~pV~Gli~~~~Ff~~LA~R~Fp~t~~IR~~~~~~YtpEPDifHEl~GHvPlLanp~fA~f~q~~G~~~l~A~  172 (302)
T 3tk2_A           98 WKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLINPVFADYLEAYGKGGVKAK  172 (302)
T ss_dssp             CEEEEESSSCCHHHHHHHHHTTEEEEECCCCCGGGTTCCSSCCHHHHHHHHSGGGGSHHHHHHHHHHHHTHHHHH
T ss_pred             cEEEecCccCCHHHHHHHHhcCcccCcccccCCCcCCCCCCCccccchhcccccccCHHHHHHHHHHHHHhhccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999985

>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A

Probab=99.94  E-value=3.7e-29  Score=269.25  Aligned_cols=148  Identities=53%  Similarity=0.812  Sum_probs=120.4

Q ss_pred             ChHHHHHhhhcCccceeeeccCC--CCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhc----CCCChHH
Q psy14589        448 SSRDFLAGLAFRVFHSTQYIRHP--SKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLAS----LGAPDEY  515 (655)
Q Consensus       448 ~~~~f~~~la~r~f~~t~~ir~~--~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~----l~~~~~~  515 (655)
                      -.|.+++.+|..-      --..  ...+||||-   |++   +-.|.......+..      ..|+..    .|++.++
T Consensus       156 ~RR~~ia~ia~~~------~~g~~~~~v~Yt~~e---~~~---W~~l~~~~~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~  223 (429)
T 1phz_A          156 ARRKQFADIAYNY------RHGQPIPRVEYTEEE---KQT---WGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFREDN  223 (429)
T ss_dssp             HHHHHHHHHHHTC------CTTSCCCCCCCCHHH---HHH---HHHHHHHHHHHHHHHBCHHHHHHHHHHHHHSCCBTTB
T ss_pred             HHHHHHHHHHHhC------cCCCCCCcccCCHHH---HHH---HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCCccC
Confidence            3578899888753      2222  234899998   666   32333333322222      224444    4899999


Q ss_pred             HHHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccc
Q psy14589        516 VERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLF  595 (655)
Q Consensus       516 i~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l  595 (655)
                      ||+|.++|         +.++++|||++++++||||+..||++||+|+||+|+|||++++++|+||||+|||+|||||||
T Consensus       224 IPql~~vs---------~~L~~~TGw~~~pV~gli~~~~F~~~LA~r~F~~t~~iR~~~~~~YtpEPDi~He~~GH~PlL  294 (429)
T 1phz_A          224 IPQLEDVS---------QFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLF  294 (429)
T ss_dssp             CCCHHHHH---------HHHHHHHSCEEEECSSCCCHHHHHHHHTTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHH
T ss_pred             CCCHHHHH---------HHHHhccCCEEEeccccCCHHHHHHHHhccccceeeeecCccccccCCCcchhHHHhcccccc
Confidence            99999999         666778999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHhhcccCCce
Q psy14589        596 ADPSFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       596 ~~p~f~~~~~~~g~~~~~a~~  616 (655)
                      +||+||||+|+||++|++|+.
T Consensus       295 ~~p~fA~f~q~~G~~~l~a~~  315 (429)
T 1phz_A          295 SDRSFAQFSQEIGLASLGAPD  315 (429)
T ss_dssp             TSHHHHHHHHHHHHHHTTCCH
T ss_pred             cCHHHHHHHHHHHHHhcCCCH
Confidence            999999999999999999974

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=99.87  E-value=2.1e-21  Score=206.12  Aligned_cols=236  Identities=14%  Similarity=-0.026  Sum_probs=171.9

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhhhhHHHHHHHHhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAFRVFHSTQYIRHP  102 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL~  102 (655)
                      +....+.|.+|+.|..++|.+....     +..    .-.....|.+++...   +++++++++||++++++.|||+++.
T Consensus        90 ~~~~cg~C~~c~~g~~~~c~~~~~~-----g~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  160 (340)
T 3s2e_A           90 LYSACGYCEHCLQGWETLCEKQQNT-----GYS----VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLK  160 (340)
T ss_dssp             EEECCSSSHHHHTTCGGGCTTCEEB-----TTT----BCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCCCCCChHHhCcCcccCcccccc-----CCC----CCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHHH
Confidence            4456889999999988887764431     110    001112233444332   4578899999999999999999994


Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                       ..++ ++|++|||+|+ |+||++++|+||++|++|++++++++|++.++++||++++|+++.   ++.+.+++..+++|
T Consensus       161 -~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~---~~~~~~~~~~g~~d  234 (340)
T 3s2e_A          161 -VTDT-RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDT---DPAAWLQKEIGGAH  234 (340)
T ss_dssp             -TTTC-CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTS---CHHHHHHHHHSSEE
T ss_pred             -HcCC-CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCc---CHHHHHHHhCCCCC
Confidence             5677 89999999998 999999999999999999999999999999999999999999875   56677766445899


Q ss_pred             EEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCe
Q psy14589        183 ADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLF  261 (655)
Q Consensus       183 vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~k  261 (655)
                      +|+|++|+. .   ++.++++++++|+++.+|...                              .+. .........+.
T Consensus       235 ~vid~~g~~~~---~~~~~~~l~~~G~iv~~G~~~------------------------------~~~-~~~~~~~~~~~  280 (340)
T 3s2e_A          235 GVLVTAVSPKA---FSQAIGMVRRGGTIALNGLPP------------------------------GDF-GTPIFDVVLKG  280 (340)
T ss_dssp             EEEESSCCHHH---HHHHHHHEEEEEEEEECSCCS------------------------------SEE-EEEHHHHHHTT
T ss_pred             EEEEeCCCHHH---HHHHHHHhccCCEEEEeCCCC------------------------------CCC-CCCHHHHHhCC
Confidence            999999876 6   899999999999999987210                              000 00000000122


Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      .++..+... ....+.++++.++++++++ .+...             .   -+++.++++.+++..
T Consensus       281 ~~i~g~~~~-~~~~~~~~~~l~~~g~l~~-~~~~~-------------~---l~~~~~A~~~~~~~~  329 (340)
T 3s2e_A          281 ITIRGSIVG-TRSDLQESLDFAAHGDVKA-TVSTA-------------K---LDDVNDVFGRLREGK  329 (340)
T ss_dssp             CEEEECCSC-CHHHHHHHHHHHHTTSCCC-CEEEE-------------C---GGGHHHHHHHHHTTC
T ss_pred             eEEEEEecC-CHHHHHHHHHHHHhCCCCc-eEEEE-------------e---HHHHHHHHHHHHcCC
Confidence            345555444 4678999999999999885 22222             2   246778888887653

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=99.87  E-value=2.6e-21  Score=205.70  Aligned_cols=240  Identities=15%  Similarity=0.049  Sum_probs=170.5

Q ss_pred             ccccccccchhHhhhhhhHH-HhCCCCCCCCCCcccccccccccCCcEEee-cCC---CCCCCCHHhHhhhhhHHHHHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLI-QNCGYAEDNIPQLEDISKFLKDSTGFSLRP-VAG---LLSSRDFLAGLAFRVFHSTQYI   99 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~-~~~~y~~~~iP~le~V~~~l~~~~g~~~~~-v~~---l~~~~s~~eAAal~~a~~TA~~   99 (655)
                      .+.+..+.|.+|..|..++| ++..+.... .+..    .-.....|.+++ ...   +++ +++++||+++++++|||+
T Consensus        87 ~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~-~g~~----~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~~  160 (345)
T 3jv7_A           87 YGPWGCGACHACARGRENYCTRAADLGITP-PGLG----SPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYH  160 (345)
T ss_dssp             CCSCCCSSSHHHHTTCGGGCSSHHHHTCCC-BTTT----BCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHHH
T ss_pred             ecCCCCCCChHHHCcCcCcCcccccccccc-CCcC----CCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHHH
Confidence            34567789999999988777 221110000 0000    001112223333 221   334 889999999999999999


Q ss_pred             Hhhc-CCCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589        100 RHPS-KPLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       100 aL~~-~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ++.+ .+.+ ++|++|+|+|+ |+||++++|+||++ |++|++++++++|++.++++||++++|+.+    ++.+.+++.
T Consensus       161 ~l~~~~~~~-~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~----~~~~~v~~~  234 (345)
T 3jv7_A          161 AISRVLPLL-GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA----GAADAIREL  234 (345)
T ss_dssp             HHHTTGGGC-CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST----THHHHHHHH
T ss_pred             HHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC----cHHHHHHHH
Confidence            9987 3467 89999999998 99999999999999 679999999999999999999999999875    567777776


Q ss_pred             CC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCC
Q psy14589        178 GS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCH  254 (655)
Q Consensus       178 ~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~  254 (655)
                      ++  ++|+|+|++|++ .   ++.++++++++|+++.+|...                             ..+.. . .
T Consensus       235 t~g~g~d~v~d~~G~~~~---~~~~~~~l~~~G~iv~~G~~~-----------------------------~~~~~-~-~  280 (345)
T 3jv7_A          235 TGGQGATAVFDFVGAQST---IDTAQQVVAVDGHISVVGIHA-----------------------------GAHAK-V-G  280 (345)
T ss_dssp             HGGGCEEEEEESSCCHHH---HHHHHHHEEEEEEEEECSCCT-----------------------------TCCEE-E-S
T ss_pred             hCCCCCeEEEECCCCHHH---HHHHHHHHhcCCEEEEECCCC-----------------------------CCCCC-c-C
Confidence            54  899999999998 7   899999999999999998310                             00000 0 0


Q ss_pred             CCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        255 SCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       255 ~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      .....+..++..+... ....+.++++.++++.+++ .++..|+                +++.++++.+++..
T Consensus       281 ~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~-~~~~~~l----------------~~~~~A~~~~~~~~  336 (345)
T 3jv7_A          281 FFMIPFGASVVTPYWG-TRSELMEVVALARAGRLDI-HTETFTL----------------DEGPAAYRRLREGS  336 (345)
T ss_dssp             TTTSCTTCEEECCCSC-CHHHHHHHHHHHHTTCCCC-CEEEECS----------------TTHHHHHHHHHHTC
T ss_pred             HHHHhCCCEEEEEecC-CHHHHHHHHHHHHcCCCce-EEEEEcH----------------HHHHHHHHHHHcCC
Confidence            1112234455555544 4678999999999999986 2333332                45677888876543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=99.86  E-value=5e-21  Score=204.24  Aligned_cols=245  Identities=11%  Similarity=-0.037  Sum_probs=172.1

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec-----CCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV-----AGLLSSRDFLAGLAFRVFHSTQYI   99 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v-----~~l~~~~s~~eAAal~~a~~TA~~   99 (655)
                      .+..+.+.|.+|+.|..++|....      .+.......-.....|.+++.     ..+++++++++||+++++++|||+
T Consensus        84 ~~~~~c~~c~~c~~g~~~~~~~~~------~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~  157 (352)
T 3fpc_A           84 PAITPDWRTSEVQRGYHQHSGGML------AGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFH  157 (352)
T ss_dssp             CSBCCCSSSHHHHTTCGGGTTSTT------TTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHH
T ss_pred             ccccCCCCchhhcCCCcCCccccc------cccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHH
Confidence            356778899999999765543321      110000000111122333432     235678999999999999999999


Q ss_pred             HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ++ +.+++ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+++.   ++.+.+++.+
T Consensus       158 al-~~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~v~~~t  231 (352)
T 3fpc_A          158 GA-ELANI-KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG---DIVEQILKAT  231 (352)
T ss_dssp             HH-HHTTC-CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGS---CHHHHHHHHT
T ss_pred             HH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCc---CHHHHHHHHc
Confidence            98 56677 89999999997 9999999999999999 89999999999999999999999998775   6888888876


Q ss_pred             C--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccc-cccCC
Q psy14589        179 S--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPL-IQSCH  254 (655)
Q Consensus       179 ~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~-~~~~~  254 (655)
                      +  ++|+|+|++|++ .   ++.++++++++||++.+|..                              ..+. .....
T Consensus       232 ~g~g~D~v~d~~g~~~~---~~~~~~~l~~~G~~v~~G~~------------------------------~~~~~~~~~~  278 (352)
T 3fpc_A          232 DGKGVDKVVIAGGDVHT---FAQAVKMIKPGSDIGNVNYL------------------------------GEGDNIDIPR  278 (352)
T ss_dssp             TTCCEEEEEECSSCTTH---HHHHHHHEEEEEEEEECCCC------------------------------CSCSEEEEET
T ss_pred             CCCCCCEEEECCCChHH---HHHHHHHHhcCCEEEEeccc------------------------------CCCCceecch
Confidence            4  799999999995 7   89999999999999999821                              0000 00000


Q ss_pred             CCC--CCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589        255 SCP--FSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS  327 (655)
Q Consensus       255 ~~~--~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~  327 (655)
                      ...  ..+..++..+........+.+++++++++++++..+.++...             +-+++.++++.+++.
T Consensus       279 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~-------------gl~~~~~A~~~~~~~  340 (352)
T 3fpc_A          279 SEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFR-------------GFDNIEKAFMLMKDK  340 (352)
T ss_dssp             TTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEEE-------------STTHHHHHHHHHHSC
T ss_pred             hHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCCChhHhheeeCC-------------CHHHHHHHHHHHHhC
Confidence            000  012345554443213457899999999999997543321110             014577888888764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=99.86  E-value=7.9e-21  Score=202.01  Aligned_cols=238  Identities=15%  Similarity=0.018  Sum_probs=171.2

Q ss_pred             ccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhc
Q psy14589         27 LYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPS  103 (655)
Q Consensus        27 ~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~  103 (655)
                      ....+.|.+|+.|.+++|++..+.     +..    .-.....+.+++..   .+++++++++||+++++++|||+++.+
T Consensus        90 ~~~cg~c~~C~~g~~~~C~~~~~~-----G~~----~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~  160 (343)
T 2eih_A           90 GLSCGRCERCLAGEDNLCPRYQIL-----GEH----RHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD  160 (343)
T ss_dssp             EECCSCSHHHHTTCGGGCTTCEET-----TTS----SCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred             CCCcccchhhccCccccccccccc-----CcC----CCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence            344588999999998888765421     110    00111223334432   356788999999999999999999987


Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC--CCe
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG--SEL  181 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~--~gv  181 (655)
                      .+++ ++|++|+|+|++|++|++++|+|+++|++|+++++++++++.++++|++.++|+++.   ++.+.+.+.+  .++
T Consensus       161 ~~~~-~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~---~~~~~~~~~~~~~~~  236 (343)
T 2eih_A          161 KLGV-RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHP---DWPKEVRRLTGGKGA  236 (343)
T ss_dssp             TSCC-CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTST---THHHHHHHHTTTTCE
T ss_pred             hcCC-CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcc---cHHHHHHHHhCCCCc
Confidence            7788 899999999999999999999999999999999999999999999999999998764   5667777664  379


Q ss_pred             eEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCe
Q psy14589        182 DADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLF  261 (655)
Q Consensus       182 DvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~k  261 (655)
                      |+++|++|++.   ++.++++++++|+++.++..                              ..+...........+.
T Consensus       237 d~vi~~~g~~~---~~~~~~~l~~~G~~v~~g~~------------------------------~~~~~~~~~~~~~~~~  283 (343)
T 2eih_A          237 DKVVDHTGALY---FEGVIKATANGGRIAIAGAS------------------------------SGYEGTLPFAHVFYRQ  283 (343)
T ss_dssp             EEEEESSCSSS---HHHHHHHEEEEEEEEESSCC------------------------------CSCCCCCCTTHHHHTT
T ss_pred             eEEEECCCHHH---HHHHHHhhccCCEEEEEecC------------------------------CCCcCccCHHHHHhCC
Confidence            99999999778   89999999999999998720                              0000000000000123


Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS  327 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~  327 (655)
                      .++..+... ....+.++++.+++++++....+..|             +   +++.++++.+++.
T Consensus       284 ~~~~g~~~~-~~~~~~~~~~l~~~g~l~~~i~~~~~-------------l---~~~~~A~~~~~~~  332 (343)
T 2eih_A          284 LSILGSTMA-SKSRLFPILRFVEEGKLKPVVGQVLP-------------L---EAAAEGHRLLEER  332 (343)
T ss_dssp             CEEEECCSC-CGGGHHHHHHHHHHTSSCCCEEEEEE-------------G---GGHHHHHHHHHTT
T ss_pred             cEEEEecCc-cHHHHHHHHHHHHcCCCCCceeEEee-------------H---HHHHHHHHHHHcC
Confidence            445444443 45679999999999988632212222             2   4577888888654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=99.85  E-value=5.8e-21  Score=204.10  Aligned_cols=197  Identities=18%  Similarity=0.155  Sum_probs=148.3

Q ss_pred             CChhhhhhHHhhhhc---cccccccccchhHhhhhhhHHHhCCCCC----CCCCCcc---cccccccccC----------
Q psy14589          9 YTAEETKTWGEVFRN---LTKLYPTHACKEHNHVFPLLIQNCGYAE----DNIPQLE---DISKFLKDST----------   68 (655)
Q Consensus         9 y~~~e~~~W~~~~~~---~~~~l~~~aC~~~~~G~~~l~~~~~y~~----~~iP~le---~V~~~l~~~~----------   68 (655)
                      |+.++...|.++..+   -.+++.+......+. -|+....+.++.    +.+++.|   .|.+++..++          
T Consensus        37 ~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~-~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~  115 (353)
T 4dup_A           37 FGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNR-PDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCG  115 (353)
T ss_dssp             SSSGGGEEEEEECCCCCCTTEEEEEEEEEEECH-HHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             CCCccceEEEeccCCCCCCCEEEEEEEEEecCH-HHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCCCCCCEEEE
Confidence            444555555554332   134555555444443 366666666642    3455654   2222222222          


Q ss_pred             -----CcE---EeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe
Q psy14589         69 -----GFS---LRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT  137 (655)
Q Consensus        69 -----g~~---~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~  137 (655)
                           +|+   ++|..   .+++++++++||+++++++|||+++.+.+++ ++|++|+|+||+|+||++++|+||++|++
T Consensus       116 ~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~  194 (353)
T 4dup_A          116 LANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGL-TEGESVLIHGGTSGIGTTAIQLARAFGAE  194 (353)
T ss_dssp             ECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCC-CTTCEEEESSTTSHHHHHHHHHHHHTTCE
T ss_pred             ecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC-CCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence                 232   23322   2467889999999999999999999888888 99999999999999999999999999999


Q ss_pred             EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        138 VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       138 Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++++++++|++.++++|++.++|+.+.   ++.+.+.+.+ +++|+++|++|++.   ++.++++++++|+++.+|
T Consensus       195 Vi~~~~~~~~~~~~~~lGa~~~~~~~~~---~~~~~~~~~~~~g~Dvvid~~g~~~---~~~~~~~l~~~G~iv~~g  265 (353)
T 4dup_A          195 VYATAGSTGKCEACERLGAKRGINYRSE---DFAAVIKAETGQGVDIILDMIGAAY---FERNIASLAKDGCLSIIA  265 (353)
T ss_dssp             EEEEESSHHHHHHHHHHTCSEEEETTTS---CHHHHHHHHHSSCEEEEEESCCGGG---HHHHHHTEEEEEEEEECC
T ss_pred             EEEEeCCHHHHHHHHhcCCCEEEeCCch---HHHHHHHHHhCCCceEEEECCCHHH---HHHHHHHhccCCEEEEEE
Confidence            9999999999999999999999999875   5666666654 48999999999998   899999999999999987

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=99.85  E-value=5.5e-21  Score=208.04  Aligned_cols=220  Identities=17%  Similarity=0.125  Sum_probs=157.6

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEee------cCCCCCC---CCHHhHhhhhhHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRP------VAGLLSS---RDFLAGLAFRVFHS   95 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~------v~~l~~~---~s~~eAAal~~a~~   95 (655)
                      .+.+..+.|.+|..|..++|++........+         .....|.+++      ++..++.   .++.++|+++++++
T Consensus       128 ~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~---------G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~  198 (404)
T 3ip1_A          128 EEMLWCGHCRPCAEGFPNHCENLNELGFNVD---------GAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTS  198 (404)
T ss_dssp             CSEECCSCSHHHHTTCGGGCTTCEEBTTTBC---------CSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHH
T ss_pred             CCccCCCCCHHHHCcCcccCccccccCCCCC---------CCCcceEEechHHeEeccccccccccccchhHHhhhhHHH
Confidence            3556789999999999888876543110001         0111222333      2222211   23677999999999


Q ss_pred             HHHHHhhcC-CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589         96 TQYIRHPSK-PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus        96 TA~~aL~~~-~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~  173 (655)
                      |||+++... +++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+++.   ++.+.
T Consensus       199 ta~~al~~~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~  273 (404)
T 3ip1_A          199 VAYNAVIVRGGGI-RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKE---NFVEA  273 (404)
T ss_dssp             HHHHHHTTTSCCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTS---CHHHH
T ss_pred             HHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCC---CHHHH
Confidence            999998755 477 89999999998 9999999999999999 99999999999999999999999999875   68888


Q ss_pred             HHhcCC--CeeEEEeCCCcc--hHHHHHHHHHHh----ccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeec
Q psy14589        174 ILSYGS--ELDADHPGFTDP--VYRARRKYFADL----AFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLL  245 (655)
Q Consensus       174 i~~~~~--gvDvV~D~vG~~--~~~~l~~~l~~l----~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll  245 (655)
                      +++.++  ++|+|+|++|++  .   ++.+++++    +++|+++++|..                              
T Consensus       274 i~~~t~g~g~D~vid~~g~~~~~---~~~~~~~l~~~~~~~G~iv~~G~~------------------------------  320 (404)
T 3ip1_A          274 VLDYTNGLGAKLFLEATGVPQLV---WPQIEEVIWRARGINATVAIVARA------------------------------  320 (404)
T ss_dssp             HHHHTTTCCCSEEEECSSCHHHH---HHHHHHHHHHCSCCCCEEEECSCC------------------------------
T ss_pred             HHHHhCCCCCCEEEECCCCcHHH---HHHHHHHHHhccCCCcEEEEeCCC------------------------------
Confidence            888764  799999999998  5   66777777    999999999821                              


Q ss_pred             cccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeee
Q psy14589        246 SQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHI  293 (655)
Q Consensus       246 ~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~I  293 (655)
                      ..+. .........+..++..+........+.++++.++++ +++..+
T Consensus       321 ~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~  366 (404)
T 3ip1_A          321 DAKI-PLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKI  366 (404)
T ss_dssp             CSCE-EECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGG
T ss_pred             CCCC-cccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhhe
Confidence            0000 000000001234455444331356899999999999 876433

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=99.85  E-value=6.2e-21  Score=205.58  Aligned_cols=183  Identities=11%  Similarity=0.005  Sum_probs=141.2

Q ss_pred             ccccccccchhHhhhhhhHHHhCCC------C-CCCCCCccc----ccccc--cccCCcEEeecC---CCCCCCCHHhHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGY------A-EDNIPQLED----ISKFL--KDSTGFSLRPVA---GLLSSRDFLAGL   88 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y------~-~~~iP~le~----V~~~l--~~~~g~~~~~v~---~l~~~~s~~eAA   88 (655)
                      .+....+.|.+|..|..++|.+...      . .++..++..    .....  .....|.+++..   .+++++++++||
T Consensus        93 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  172 (378)
T 3uko_A           93 CYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVC  172 (378)
T ss_dssp             CSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHG
T ss_pred             ecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCCCCHHHhh
Confidence            3456688999999998877765321      0 111000100    00000  012223344432   356788999999


Q ss_pred             hhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccch
Q psy14589         89 AFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIREL  167 (655)
Q Consensus        89 al~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~  167 (655)
                      ++++++.|||+++.+.+++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+.+.. 
T Consensus       173 ~l~~~~~ta~~al~~~~~~-~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~-  249 (378)
T 3uko_A          173 LLGCGVPTGLGAVWNTAKV-EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHD-  249 (378)
T ss_dssp             GGGTHHHHHHHHHHTTTCC-CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCS-
T ss_pred             hhhhhHHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCc-
Confidence            9999999999999888888 99999999998 9999999999999999 899999999999999999999999987310 


Q ss_pred             hHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        168 DRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       168 ~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +++.+.+++.++ ++|+|+|++|++ .   ++.++++++++ |+++++|
T Consensus       250 ~~~~~~i~~~~~gg~D~vid~~g~~~~---~~~~~~~l~~g~G~iv~~G  295 (378)
T 3uko_A          250 KPIQEVIVDLTDGGVDYSFECIGNVSV---MRAALECCHKGWGTSVIVG  295 (378)
T ss_dssp             SCHHHHHHHHTTSCBSEEEECSCCHHH---HHHHHHTBCTTTCEEEECS
T ss_pred             hhHHHHHHHhcCCCCCEEEECCCCHHH---HHHHHHHhhccCCEEEEEc
Confidence            267888888754 899999999996 6   89999999996 9999998

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=99.84  E-value=1.1e-20  Score=200.79  Aligned_cols=231  Identities=15%  Similarity=0.025  Sum_probs=165.2

Q ss_pred             cccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhcCCC
Q psy14589         30 THACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPSKPL  106 (655)
Q Consensus        30 ~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~~~~  106 (655)
                      .+.|..|+.|..++|.+..+.     +..    .-.....+.+++..   .+++++++++||+++++++|||+++.+. +
T Consensus        92 cg~C~~C~~g~~~~C~~~~~~-----g~~----~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~-~  161 (339)
T 1rjw_A           92 CGHCDYCLSGQETLCEHQKNA-----GYS----VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVT-G  161 (339)
T ss_dssp             CSCSHHHHTTCGGGCTTCEEB-----TTT----BCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHHH-T
T ss_pred             CCCCchhhCcCcccCCCccee-----ecC----CCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHhc-C
Confidence            678999999988887654321     110    00111223344432   3557889999999999999999999765 6


Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        107 YTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       107 l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      + ++|++|+|+|+ |+||++++|+||++|++|+++++++++++.++++|++.++|+++.   ++.+.+++.++++|+|+|
T Consensus       162 ~-~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~---~~~~~~~~~~~~~d~vid  236 (339)
T 1rjw_A          162 A-KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKE---DAAKFMKEKVGGVHAAVV  236 (339)
T ss_dssp             C-CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTS---CHHHHHHHHHSSEEEEEE
T ss_pred             C-CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCc---cHHHHHHHHhCCCCEEEE
Confidence            7 89999999999 899999999999999999999999999999999999999998764   566666655458999999


Q ss_pred             CCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeEEEE
Q psy14589        187 GFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVI  265 (655)
Q Consensus       187 ~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~ktsl~  265 (655)
                      ++|+. .   ++.++++++++|+++.+|...                              .+. .........+..++.
T Consensus       237 ~~g~~~~---~~~~~~~l~~~G~~v~~g~~~------------------------------~~~-~~~~~~~~~~~~~i~  282 (339)
T 1rjw_A          237 TAVSKPA---FQSAYNSIRRGGACVLVGLPP------------------------------EEM-PIPIFDTVLNGIKII  282 (339)
T ss_dssp             SSCCHHH---HHHHHHHEEEEEEEEECCCCS------------------------------SEE-EEEHHHHHHTTCEEE
T ss_pred             CCCCHHH---HHHHHHHhhcCCEEEEecccC------------------------------CCC-ccCHHHHHhCCcEEE
Confidence            99984 6   899999999999999987210                              000 000000000123444


Q ss_pred             EEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589        266 FSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS  327 (655)
Q Consensus       266 f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~  327 (655)
                      .+... ....+.++++.++++++++. ++..             .+   +++.++++.+++.
T Consensus       283 g~~~~-~~~~~~~~~~l~~~g~l~~~-~~~~-------------~l---~~~~~A~~~~~~~  326 (339)
T 1rjw_A          283 GSIVG-TRKDLQEALQFAAEGKVKTI-IEVQ-------------PL---EKINEVFDRMLKG  326 (339)
T ss_dssp             ECCSC-CHHHHHHHHHHHHTTSCCCC-EEEE-------------EG---GGHHHHHHHHHTT
T ss_pred             EeccC-CHHHHHHHHHHHHcCCCCcc-EEEE-------------cH---HHHHHHHHHHHcC
Confidence            43333 35578999999999988752 2222             22   4577888888754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=99.84  E-value=2.5e-20  Score=198.34  Aligned_cols=197  Identities=18%  Similarity=0.164  Sum_probs=148.1

Q ss_pred             cCChhhhhhHHhhhhc---cccccccccchhHhhhhhhHHHhCCCC----CCCCCCcc---ccccccccc----------
Q psy14589          8 DYTAEETKTWGEVFRN---LTKLYPTHACKEHNHVFPLLIQNCGYA----EDNIPQLE---DISKFLKDS----------   67 (655)
Q Consensus         8 ~y~~~e~~~W~~~~~~---~~~~l~~~aC~~~~~G~~~l~~~~~y~----~~~iP~le---~V~~~l~~~----------   67 (655)
                      .|+.++...|.++..+   -.+++.+..+...+. -|+....+.++    .+.++|.|   .|.+....+          
T Consensus        29 ~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~-~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~vGDrV~~  107 (342)
T 4eye_A           29 SLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCF-PDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSGIKPGDRVMA  107 (342)
T ss_dssp             SSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCH-HHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSSCCTTCEEEE
T ss_pred             cCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCH-HHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCCCCCCCEEEE
Confidence            3455655566555432   244566665555553 36666666653    24455555   222222221          


Q ss_pred             ----CCcE---EeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe
Q psy14589         68 ----TGFS---LRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT  137 (655)
Q Consensus        68 ----~g~~---~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~  137 (655)
                          .+|+   +++..   .+++++++++||+++++++|||+++.+.+++ ++|++|||+||+|+||++++|+||++|++
T Consensus       108 ~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~  186 (342)
T 4eye_A          108 FNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQL-RAGETVLVLGAAGGIGTAAIQIAKGMGAK  186 (342)
T ss_dssp             ECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCC-CTTCEEEESSTTSHHHHHHHHHHHHTTCE
T ss_pred             ecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCC-CCCCEEEEECCCCHHHHHHHHHHHHcCCE
Confidence                2233   23322   2557889999999999999999999888888 99999999999999999999999999999


Q ss_pred             EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        138 VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       138 Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+++++++++++.++++|++.++|+. .   ++.+.+++.++  ++|+|+|++|++.   ++.++++++++|+++.+|
T Consensus       187 Vi~~~~~~~~~~~~~~~ga~~v~~~~-~---~~~~~v~~~~~~~g~Dvvid~~g~~~---~~~~~~~l~~~G~iv~~G  257 (342)
T 4eye_A          187 VIAVVNRTAATEFVKSVGADIVLPLE-E---GWAKAVREATGGAGVDMVVDPIGGPA---FDDAVRTLASEGRLLVVG  257 (342)
T ss_dssp             EEEEESSGGGHHHHHHHTCSEEEESS-T---THHHHHHHHTTTSCEEEEEESCC--C---HHHHHHTEEEEEEEEEC-
T ss_pred             EEEEeCCHHHHHHHHhcCCcEEecCc-h---hHHHHHHHHhCCCCceEEEECCchhH---HHHHHHhhcCCCEEEEEE
Confidence            99999999999999999999999988 4   67888887754  7999999999988   899999999999999987

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=99.84  E-value=9.7e-21  Score=202.82  Aligned_cols=233  Identities=15%  Similarity=0.011  Sum_probs=165.7

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHh---hhhhHHHHHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGL---AFRVFHSTQYI   99 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAA---al~~a~~TA~~   99 (655)
                      +....+.|..|+.|..++|.+...-     +..    .-.....|.+++..   .+++++++++||   ++++++.|||+
T Consensus       105 ~~~~Cg~C~~C~~g~~~~C~~~~~~-----G~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~  175 (359)
T 1h2b_A          105 PAVTDGTCLACRAGEDMHCENLEFP-----GLN----IDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYR  175 (359)
T ss_dssp             SCBCCSCSHHHHTTCGGGCTTCBCB-----TTT----BCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHH
T ss_pred             CCCCCCCChhhhCcCcccCCCcccc-----ccC----CCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHH
Confidence            3456789999999998888764321     110    00111222333332   356788999998   89999999999


Q ss_pred             HhhcC-CCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589        100 RHPSK-PLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       100 aL~~~-~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ++.+. +++ ++|++|||+|+ |+||++++|+||++ |++|++++++++|++.++++||++++|+++    ++.+.+++.
T Consensus       176 al~~~~~~~-~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~----~~~~~v~~~  249 (359)
T 1h2b_A          176 AVKKAARTL-YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARR----DPVKQVMEL  249 (359)
T ss_dssp             HHHHHHTTC-CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTS----CHHHHHHHH
T ss_pred             HHHhhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccc----hHHHHHHHH
Confidence            99774 677 89999999999 99999999999999 999999999999999999999999999876    255666666


Q ss_pred             CC--CeeEEEeCCCcc---hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeecccccccc
Q psy14589        178 GS--ELDADHPGFTDP---VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQS  252 (655)
Q Consensus       178 ~~--gvDvV~D~vG~~---~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~  252 (655)
                      ++  ++|+|+|++|++   .   ++.++++  ++|+++.+|..                              ..+  ..
T Consensus       250 ~~g~g~Dvvid~~G~~~~~~---~~~~~~~--~~G~~v~~g~~------------------------------~~~--~~  292 (359)
T 1h2b_A          250 TRGRGVNVAMDFVGSQATVD---YTPYLLG--RMGRLIIVGYG------------------------------GEL--RF  292 (359)
T ss_dssp             TTTCCEEEEEESSCCHHHHH---HGGGGEE--EEEEEEECCCS------------------------------SCC--CC
T ss_pred             hCCCCCcEEEECCCCchHHH---HHHHhhc--CCCEEEEEeCC------------------------------CCC--CC
Confidence            53  799999999987   7   8888887  89999998721                              000  00


Q ss_pred             CCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        253 CHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       253 ~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      .......+..++..+... ....+.++++.+++++++.. |+..|                -+++.++++.+++..
T Consensus       293 ~~~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~~-i~~~~----------------l~~~~~A~~~~~~~~  350 (359)
T 1h2b_A          293 PTIRVISSEVSFEGSLVG-NYVELHELVTLALQGKVRVE-VDIHK----------------LDEINDVLERLEKGE  350 (359)
T ss_dssp             CHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTSCCCC-EEEEE----------------GGGHHHHHHHHHTTC
T ss_pred             CHHHHHhCCcEEEEecCC-CHHHHHHHHHHHHcCCCcce-EEEEe----------------HHHHHHHHHHHHcCC
Confidence            000000112344444333 35679999999999988643 22222                245778888887543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.84  E-value=1.4e-20  Score=202.58  Aligned_cols=236  Identities=14%  Similarity=0.015  Sum_probs=164.8

Q ss_pred             ccccchhHhhhhhhHHHhC--CCCCCC-CCCcccccccccccCCcEEeecC---CCCCC-CCHHhHhhhhhHHHHHHHHh
Q psy14589         29 PTHACKEHNHVFPLLIQNC--GYAEDN-IPQLEDISKFLKDSTGFSLRPVA---GLLSS-RDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~--~y~~~~-iP~le~V~~~l~~~~g~~~~~v~---~l~~~-~s~~eAAal~~a~~TA~~aL  101 (655)
                      ..+.|.+|+.|..++|.+.  ++.... ..+.    ..-.....+.++|..   .++++ +++++||+++++++|||+++
T Consensus       112 ~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~----~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al  187 (369)
T 1uuf_A          112 SCKHCEECEDGLENYCDHMTGTYNSPTPDEPG----HTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL  187 (369)
T ss_dssp             CCSSSHHHHTTCGGGCTTCEETTTSBCSSTTS----BCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHH
T ss_pred             CCCCCcccCCCCcccCcchhcccccccccCCC----CCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHH
Confidence            3788999999999888765  231000 0000    000112223344433   34567 89999999999999999999


Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCe
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .+. ++ ++|++|||+|+ |+||++++|+||++|++|+++++++++++.++++||+.++|+.+.   ++.+   +..+++
T Consensus       188 ~~~-~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~---~~~~---~~~~g~  258 (369)
T 1uuf_A          188 RHW-QA-GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNA---DEMA---AHLKSF  258 (369)
T ss_dssp             HHT-TC-CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCH---HHHH---TTTTCE
T ss_pred             Hhc-CC-CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccH---HHHH---HhhcCC
Confidence            764 77 89999999998 999999999999999999999999999999999999999998763   3333   333589


Q ss_pred             eEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCC
Q psy14589        182 DADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSL  260 (655)
Q Consensus       182 DvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~  260 (655)
                      |+|+|++|++ .   ++.++++++++|+++.+|...                              .+...........+
T Consensus       259 Dvvid~~g~~~~---~~~~~~~l~~~G~iv~~G~~~------------------------------~~~~~~~~~~~~~~  305 (369)
T 1uuf_A          259 DFILNTVAAPHN---LDDFTTLLKRDGTMTLVGAPA------------------------------TPHKSPEVFNLIMK  305 (369)
T ss_dssp             EEEEECCSSCCC---HHHHHTTEEEEEEEEECCCC-------------------------------------CHHHHHTT
T ss_pred             CEEEECCCCHHH---HHHHHHHhccCCEEEEeccCC------------------------------CCccccCHHHHHhC
Confidence            9999999987 7   889999999999999987310                              00000000000012


Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      ..++..+... ....+.++++++++++|++. ++..|                -+++.++++.+++..
T Consensus       306 ~~~i~g~~~~-~~~~~~~~~~l~~~g~i~~~-i~~~~----------------l~~~~~A~~~~~~~~  355 (369)
T 1uuf_A          306 RRAIAGSMIG-GIPETQEMLDFCAEHGIVAD-IEMIR----------------ADQINEAYERMLRGD  355 (369)
T ss_dssp             TCEEEECCSC-CHHHHHHHHHHHHHHTCCCC-EEEEC----------------GGGHHHHHHHHHTTC
T ss_pred             CcEEEEeecC-CHHHHHHHHHHHHhCCCCcc-eEEEc----------------HHHHHHHHHHHHcCC
Confidence            2344444433 35678999999999988742 32222                245778888887543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=99.84  E-value=1.7e-20  Score=199.87  Aligned_cols=237  Identities=13%  Similarity=0.023  Sum_probs=165.3

Q ss_pred             ccccccchhHhhhhhhHHHhCCC-CCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhh
Q psy14589         27 LYPTHACKEHNHVFPLLIQNCGY-AEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHP  102 (655)
Q Consensus        27 ~l~~~aC~~~~~G~~~l~~~~~y-~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~  102 (655)
                      ....+.|.+|+.|..++|. ... .....+..............|.+++..   .+++++++++||++++++.|||+++.
T Consensus        92 ~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  170 (348)
T 3two_A           92 VNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLK  170 (348)
T ss_dssp             EECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH
T ss_pred             cCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            3578999999999988887 221 000000000000001112223344433   35678999999999999999999997


Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      +. ++ ++|++|||+|+ |+||++++|+||++|++|++++++++|++.++++||++++ ...   +++       ..++|
T Consensus       171 ~~-~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~---~~~-------~~~~D  236 (348)
T 3two_A          171 FS-KV-TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDP---KQC-------KEELD  236 (348)
T ss_dssp             HT-TC-CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSG---GGC-------CSCEE
T ss_pred             hc-CC-CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCH---HHH-------hcCCC
Confidence            65 77 89999999998 9999999999999999999999999999999999999999 322   111       11799


Q ss_pred             EEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccc-cCCCCCC-C
Q psy14589        183 ADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQ-SCHSCPF-S  259 (655)
Q Consensus       183 vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~-~~~~~~~-~  259 (655)
                      +|+|++|++ .   ++.++++++++|+++.+|..                              ...... ....... .
T Consensus       237 ~vid~~g~~~~---~~~~~~~l~~~G~iv~~G~~------------------------------~~~~~~~~~~~~~~~~  283 (348)
T 3two_A          237 FIISTIPTHYD---LKDYLKLLTYNGDLALVGLP------------------------------PVEVAPVLSVFDFIHL  283 (348)
T ss_dssp             EEEECCCSCCC---HHHHHTTEEEEEEEEECCCC------------------------------CGGGCCEEEHHHHHHT
T ss_pred             EEEECCCcHHH---HHHHHHHHhcCCEEEEECCC------------------------------CCCCcccCCHHHHHhh
Confidence            999999998 8   89999999999999999831                              000000 0000000 2


Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS  329 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~  329 (655)
                      +..++..+... ....+.++++.+++++|++ .++..|                -+++.++++.+++...
T Consensus       284 ~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~-~~~~~~----------------l~~~~~A~~~~~~~~~  335 (348)
T 3two_A          284 GNRKVYGSLIG-GIKETQEMVDFSIKHNIYP-EIDLIL----------------GKDIDTAYHNLTHGKA  335 (348)
T ss_dssp             CSCEEEECCSC-CHHHHHHHHHHHHHTTCCC-CEEEEC----------------GGGHHHHHHHHHTTCC
T ss_pred             CCeEEEEEecC-CHHHHHHHHHHHHhCCCCc-eEEEEE----------------HHHHHHHHHHHHcCCC
Confidence            33455555555 4668999999999999886 233322                2467788888876543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=99.84  E-value=2.7e-20  Score=199.69  Aligned_cols=174  Identities=13%  Similarity=0.048  Sum_probs=138.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|||+| +|+||++++|+||++|++|++++++++|++.++++||+
T Consensus       158 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~-~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~  235 (363)
T 3uog_A          158 APKSLDAAEASTLPCAGLTAWFALVEKGHL-RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGAD  235 (363)
T ss_dssp             CCTTSCHHHHHTTTTHHHHHHHHHTTTTCC-CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHhhcccHHHHHHHHHHHhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCC
Confidence            567899999999999999999999888888 9999999999 59999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhh
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFF  235 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~  235 (655)
                      +++|+...   ++.+.+++.++  ++|+|+|++|++.   ++.++++++++|+++.+|..                    
T Consensus       236 ~vi~~~~~---~~~~~v~~~~~g~g~D~vid~~g~~~---~~~~~~~l~~~G~iv~~G~~--------------------  289 (363)
T 3uog_A          236 HGINRLEE---DWVERVYALTGDRGADHILEIAGGAG---LGQSLKAVAPDGRISVIGVL--------------------  289 (363)
T ss_dssp             EEEETTTS---CHHHHHHHHHTTCCEEEEEEETTSSC---HHHHHHHEEEEEEEEEECCC--------------------
T ss_pred             EEEcCCcc---cHHHHHHHHhCCCCceEEEECCChHH---HHHHHHHhhcCCEEEEEecC--------------------
Confidence            99995433   67777877643  8999999999888   89999999999999999830                    


Q ss_pred             hhhhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcce
Q psy14589        236 FFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNL  290 (655)
Q Consensus       236 ~~~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inl  290 (655)
                                ..............+..++..+... ....+.++++++++++++.
T Consensus       290 ----------~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~  333 (363)
T 3uog_A          290 ----------EGFEVSGPVGPLLLKSPVVQGISVG-HRRALEDLVGAVDRLGLKP  333 (363)
T ss_dssp             ----------SSCEECCBTTHHHHTCCEEEECCCC-CHHHHHHHHHHHHHHTCCC
T ss_pred             ----------CCcccCcCHHHHHhCCcEEEEEecC-CHHHHHHHHHHHHcCCCcc
Confidence                      1100000000001123445544444 4568999999999988653

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=99.84  E-value=2.4e-20  Score=199.69  Aligned_cols=237  Identities=10%  Similarity=0.028  Sum_probs=166.0

Q ss_pred             cccccchhHhhhhhhHHHhC--CCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhh
Q psy14589         28 YPTHACKEHNHVFPLLIQNC--GYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHP  102 (655)
Q Consensus        28 l~~~aC~~~~~G~~~l~~~~--~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~  102 (655)
                      ...+.|.+|+.|..++|.+.  .+......+..    .-.....+.++|.   ..+++++++++||+++++++|||+++.
T Consensus        98 ~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  173 (360)
T 1piw_A           98 FSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYV----SQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLV  173 (360)
T ss_dssp             ECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCB----CCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCCCChhhcCCCcccCcchhhccccccCCCcc----CCCcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            46789999999999888764  22100000100    0011122333443   235678899999999999999999997


Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      + +++ ++|++|||+|+ |+||++++|+||++|++|++++++++|++.++++||++++|+++..  ++.+.+.   +++|
T Consensus       174 ~-~~~-~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~--~~~~~~~---~~~D  245 (360)
T 1piw_A          174 R-NGC-GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEG--DWGEKYF---DTFD  245 (360)
T ss_dssp             H-TTC-STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTS--CHHHHSC---SCEE
T ss_pred             H-cCC-CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCch--HHHHHhh---cCCC
Confidence            6 677 89999999999 9999999999999999999999999999999999999999986520  3444333   4899


Q ss_pred             EEEeCCCc---chHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCC
Q psy14589        183 ADHPGFTD---PVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFS  259 (655)
Q Consensus       183 vV~D~vG~---~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~  259 (655)
                      +|+|++|+   ..   ++.++++++++|+++.+|...                   .      +    +..  .......
T Consensus       246 ~vid~~g~~~~~~---~~~~~~~l~~~G~iv~~g~~~-------------------~------~----~~~--~~~~~~~  291 (360)
T 1piw_A          246 LIVVCASSLTDID---FNIMPKAMKVGGRIVSISIPE-------------------Q------H----EML--SLKPYGL  291 (360)
T ss_dssp             EEEECCSCSTTCC---TTTGGGGEEEEEEEEECCCCC-------------------S------S----CCE--EECGGGC
T ss_pred             EEEECCCCCcHHH---HHHHHHHhcCCCEEEEecCCC-------------------C------c----ccc--CHHHHHh
Confidence            99999998   57   789999999999999987210                   0      0    000  0000011


Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCch--HHHHHHHHHccC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGD--LSSVIESLRSSC  328 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~--v~~~l~~L~~~~  328 (655)
                      +..++..+... ....+.++++.+++++|+.. |+..|             +   ++  +.++++.+++..
T Consensus       292 ~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~~-i~~~~-------------l---~~~~~~~A~~~~~~~~  344 (360)
T 1piw_A          292 KAVSISYSALG-SIKELNQLLKLVSEKDIKIW-VETLP-------------V---GEAGVHEAFERMEKGD  344 (360)
T ss_dssp             BSCEEEECCCC-CHHHHHHHHHHHHHTTCCCC-EEEEE-------------S---SHHHHHHHHHHHHHTC
T ss_pred             CCeEEEEEecC-CHHHHHHHHHHHHhCCCcce-EEEEe-------------c---cHhHHHHHHHHHHCCC
Confidence            23455544444 45679999999999988643 23222             1   34  778888887543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=99.84  E-value=1e-20  Score=201.21  Aligned_cols=219  Identities=13%  Similarity=0.023  Sum_probs=155.5

Q ss_pred             ccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEee-c---CCCCCCCCHHhHhhhhhHHHHHHHHhh
Q psy14589         27 LYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRP-V---AGLLSSRDFLAGLAFRVFHSTQYIRHP  102 (655)
Q Consensus        27 ~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~-v---~~l~~~~s~~eAAal~~a~~TA~~aL~  102 (655)
                      ....+.|.+|+.|.+++|.+...     .+..    .-.....+.+++ .   ..+ +++++++||+++++++|||+++.
T Consensus        91 ~~~Cg~C~~C~~g~~~~C~~~~~-----~G~~----~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~  160 (344)
T 2h6e_A           91 TWGDLTCRYCREGKFNICKNQII-----PGQT----TNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIR  160 (344)
T ss_dssp             CBCCSCSTTGGGTCGGGCTTCBC-----BTTT----BCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCCCCChhhhCCCcccCCCccc-----cccc----cCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHH
Confidence            34678999999999888875422     0100    001112222344 2   235 78899999999999999999997


Q ss_pred             cC----CCCCCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHhCCCcEEEeCCc-cchhHHHHHHH
Q psy14589        103 SK----PLYTPEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYGLGADYVVDHTI-RELDRFANQIL  175 (655)
Q Consensus       103 ~~----~~l~~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~LGAd~vId~~~-~~~~d~~~~i~  175 (655)
                      +.    +++  +|++|||+|+ |+||++++|+||++  |++|++++++++|++.++++||++++|+++ .   ++.+.+.
T Consensus       161 ~~~~~~~~~--~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~---~~~~~~~  234 (344)
T 2h6e_A          161 QALPFISKF--AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAE---SLINKLT  234 (344)
T ss_dssp             HHHHHHTTC--SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHH---HHHHHHH
T ss_pred             hhhhcccCC--CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccch---HHHHHhh
Confidence            65    255  8999999999 99999999999999  999999999999999999999999998764 2   3444443


Q ss_pred             hcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCC
Q psy14589        176 SYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCH  254 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~  254 (655)
                      + +.++|+|+|++|++ .   ++.++++++++|+++.+|..                              ..+. ....
T Consensus       235 ~-g~g~D~vid~~g~~~~---~~~~~~~l~~~G~iv~~g~~------------------------------~~~~-~~~~  279 (344)
T 2h6e_A          235 D-GLGASIAIDLVGTEET---TYNLGKLLAQEGAIILVGME------------------------------GKRV-SLEA  279 (344)
T ss_dssp             T-TCCEEEEEESSCCHHH---HHHHHHHEEEEEEEEECCCC------------------------------SSCC-CCCH
T ss_pred             c-CCCccEEEECCCChHH---HHHHHHHhhcCCEEEEeCCC------------------------------CCCc-ccCH
Confidence            2 33899999999998 7   89999999999999998721                              0000 0000


Q ss_pred             CCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccC
Q psy14589        255 SCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSS  298 (655)
Q Consensus       255 ~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~  298 (655)
                      .....+..++..+... ....+.++++.+++++++... +..|+
T Consensus       280 ~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~i~~~i-~~~~l  321 (344)
T 2h6e_A          280 FDTAVWNKKLLGSNYG-SLNDLEDVVRLSESGKIKPYI-IKVPL  321 (344)
T ss_dssp             HHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTSSCCCE-EEECC
T ss_pred             HHHhhCCcEEEEEecC-CHHHHHHHHHHHHcCCCCcce-EEEeH
Confidence            0000112344444333 356799999999999987543 44443

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=99.84  E-value=1.8e-20  Score=200.37  Aligned_cols=174  Identities=13%  Similarity=-0.008  Sum_probs=134.1

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+....+.|.+|+.|..++|++..+.  ..+..      -.....+.++|.   ..+++++++++||. .++++|||+++
T Consensus        94 ~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~------~G~~aey~~v~~~~~~~iP~~l~~~~aa~-~~~~~ta~~al  164 (356)
T 1pl8_A           94 EPGAPRENDEFCKMGRYNLSPSIFFC--ATPPD------DGNLCRFYKHNAAFCYKLPDNVTFEEGAL-IEPLSVGIHAC  164 (356)
T ss_dssp             CSEECSSCCHHHHTTCGGGCTTCEET--TBTTB------CCSCBSEEEEEGGGEEECCTTSCHHHHHH-HHHHHHHHHHH
T ss_pred             eccCCCCCChHHHCcCcccCCCcccc--CcCCC------CCccccEEEeehHHEEECcCCCCHHHHHh-hchHHHHHHHH
Confidence            35567889999999998888765431  00000      011122223333   23567788988775 47899999999


Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-C
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-S  179 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~  179 (655)
                       +.+++ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|++..+.+++.+.+++.+ +
T Consensus       165 -~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~  241 (356)
T 1pl8_A          165 -RRGGV-TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGC  241 (356)
T ss_dssp             -HHHTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred             -HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCC
Confidence             56677 89999999997 9999999999999999 999999999999999999999999987200025666776654 4


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+|+|++|++ .   ++.++++++++|+++.+|
T Consensus       242 g~D~vid~~g~~~~---~~~~~~~l~~~G~iv~~G  273 (356)
T 1pl8_A          242 KPEVTIECTGAEAS---IQAGIYATRSGGTLVLVG  273 (356)
T ss_dssp             CCSEEEECSCCHHH---HHHHHHHSCTTCEEEECS
T ss_pred             CCCEEEECCCChHH---HHHHHHHhcCCCEEEEEe
Confidence            899999999987 6   899999999999999987

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=99.84  E-value=1e-20  Score=203.68  Aligned_cols=245  Identities=14%  Similarity=-0.008  Sum_probs=171.1

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+....+.|.+|+.|..++|.+...-     +..    .-.....+.+++...   +++++++++|| +++++.|||+++
T Consensus       106 ~~~~~cg~C~~C~~g~~~~C~~~~~~-----g~~----~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l  175 (370)
T 4ej6_A          106 DPNISCGRCPQCQAGRVNLCRNLRAI-----GIH----RDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV  175 (370)
T ss_dssp             CCEECCSSSHHHHTTCGGGCTTCEEB-----TTT----BCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH
T ss_pred             CCCCCCCCChHHhCcCcccCCCcccc-----CCC----CCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH
Confidence            45577889999999998888764421     110    001112233344322   45677888776 889999999998


Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh---c
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS---Y  177 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~---~  177 (655)
                       +.+++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||+.++|+++.   ++.+.+++   .
T Consensus       176 -~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~---~~~~~i~~~~~~  249 (370)
T 4ej6_A          176 -DLSGI-KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG---DVVEAIAGPVGL  249 (370)
T ss_dssp             -HHHTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSS---CHHHHHHSTTSS
T ss_pred             -HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCc---CHHHHHHhhhhc
Confidence             56777 89999999998 9999999999999999 89999999999999999999999999875   67788887   5


Q ss_pred             CC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeecccc-ccccCC
Q psy14589        178 GS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQP-LIQSCH  254 (655)
Q Consensus       178 ~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p-~~~~~~  254 (655)
                      ++ ++|+|||++|+. .   ++.++++++++|+++.+|..                              ... ......
T Consensus       250 ~~gg~Dvvid~~G~~~~---~~~~~~~l~~~G~vv~~G~~------------------------------~~~~~~~~~~  296 (370)
T 4ej6_A          250 VPGGVDVVIECAGVAET---VKQSTRLAKAGGTVVILGVL------------------------------PQGEKVEIEP  296 (370)
T ss_dssp             STTCEEEEEECSCCHHH---HHHHHHHEEEEEEEEECSCC------------------------------CTTCCCCCCH
T ss_pred             cCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEecc------------------------------CCCCccccCH
Confidence            43 899999999965 6   89999999999999998720                              000 000000


Q ss_pred             CCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC-CcEEE
Q psy14589        255 SCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC-SYINI  333 (655)
Q Consensus       255 ~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~-~~v~i  333 (655)
                      .....+..++..+...  +..+.++++.++++++++..+.++..           .   -+++.++++.+.+.. ...++
T Consensus       297 ~~~~~~~~~i~g~~~~--~~~~~~~~~l~~~g~i~~~~~i~~~~-----------~---l~~~~~A~~~~~~~~~~~~kv  360 (370)
T 4ej6_A          297 FDILFRELRVLGSFIN--PFVHRRAADLVATGAIEIDRMISRRI-----------S---LDEAPDVISNPAAAGEVKVLV  360 (370)
T ss_dssp             HHHHHTTCEEEECCSC--TTCHHHHHHHHHTTCSCCGGGEEEEE-----------C---GGGHHHHHHSCCCTTCSEEEE
T ss_pred             HHHHhCCcEEEEeccC--hHHHHHHHHHHHcCCCChhHcEEEEE-----------E---HHHHHHHHHHHHcCCCCeEEE
Confidence            0000123455544443  35689999999999998654432211           1   245667777665443 23444


Q ss_pred             e
Q psy14589        334 I  334 (655)
Q Consensus       334 L  334 (655)
                      +
T Consensus       361 v  361 (370)
T 4ej6_A          361 I  361 (370)
T ss_dssp             C
T ss_pred             E
Confidence            4

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=99.83  E-value=3.3e-20  Score=200.34  Aligned_cols=179  Identities=14%  Similarity=0.024  Sum_probs=134.6

Q ss_pred             ccccccccchhHh-hhhhhHHHhCCCCCCCCCCcccccccccccCCcEEe-ecC---CCCCCCCHHhHhhhhhHHHHHHH
Q psy14589         25 TKLYPTHACKEHN-HVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLR-PVA---GLLSSRDFLAGLAFRVFHSTQYI   99 (655)
Q Consensus        25 ~~~l~~~aC~~~~-~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~-~v~---~l~~~~s~~eAAal~~a~~TA~~   99 (655)
                      .+.+..+.|.+|. .|..++|.+..+-.. .+....-...-.....+.++ +..   .++++++++++|++.++++|||+
T Consensus       107 ~~~~~cg~C~~C~~~g~~~~C~~~~~~g~-~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~  185 (380)
T 1vj0_A          107 NRGITCGECYWCKVSKEPYLCPNRKVYGI-NRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYH  185 (380)
T ss_dssp             CSEECCSSSHHHHTSCCGGGCTTCEETTT-TCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHHHHHTTHHHHHHH
T ss_pred             cccCCCCCCHHHhcCCCcccCCCcceecc-ccccCCCCCCCccccceEEEcccceEEECCCCCChHHhHhhhcHHHHHHH
Confidence            3455688999999 999888876432100 00000000000111122234 332   24567888855666669999999


Q ss_pred             HhhcCCC-CCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCC---ccchhHHHHHH
Q psy14589        100 RHPSKPL-YTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHT---IRELDRFANQI  174 (655)
Q Consensus       100 aL~~~~~-l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~---~~~~~d~~~~i  174 (655)
                      ++. ..+ + ++|++|||+| +|+||++++|+||++|+ +|++++++++|++.++++||++++|+.   +.   ++.+.+
T Consensus       186 al~-~~~~~-~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~---~~~~~v  259 (380)
T 1vj0_A          186 AFD-EYPES-FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVE---ERRKAI  259 (380)
T ss_dssp             HHH-TCSSC-CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHH---HHHHHH
T ss_pred             HHH-hcCCC-CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcc---hHHHHH
Confidence            995 567 7 8999999999 69999999999999995 999999999999999999999999987   43   677788


Q ss_pred             HhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        175 LSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++  ++|+|||++|++ .   ++.++++++++|+++.+|
T Consensus       260 ~~~~~g~g~Dvvid~~g~~~~---~~~~~~~l~~~G~iv~~G  298 (380)
T 1vj0_A          260 MDITHGRGADFILEATGDSRA---LLEGSELLRRGGFYSVAG  298 (380)
T ss_dssp             HHHTTTSCEEEEEECSSCTTH---HHHHHHHEEEEEEEEECC
T ss_pred             HHHhCCCCCcEEEECCCCHHH---HHHHHHHHhcCCEEEEEe
Confidence            87754  799999999985 7   899999999999999988

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=99.83  E-value=2.1e-19  Score=190.25  Aligned_cols=129  Identities=18%  Similarity=0.088  Sum_probs=119.4

Q ss_pred             CCCCCCHHh---HhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLA---GLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~e---AAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L  154 (655)
                      +++++++++   +|+++++++|||+++.+.+++ ++|++|+|+||+|++|++++|+||++|++|++++++++|++.++++
T Consensus       114 ~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~  192 (334)
T 3qwb_A          114 LPKGTSDEELKLYAAGLLQVLTALSFTNEAYHV-KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY  192 (334)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCC-CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred             CCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccC-CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence            457889999   899999999999999888888 9999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        155 GADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++.++|+.+.   ++.+.+.+.++  ++|+|+|++|++.   ++.++++++++|+++.+|
T Consensus       193 ga~~~~~~~~~---~~~~~~~~~~~~~g~D~vid~~g~~~---~~~~~~~l~~~G~iv~~G  247 (334)
T 3qwb_A          193 GAEYLINASKE---DILRQVLKFTNGKGVDASFDSVGKDT---FEISLAALKRKGVFVSFG  247 (334)
T ss_dssp             TCSEEEETTTS---CHHHHHHHHTTTSCEEEEEECCGGGG---HHHHHHHEEEEEEEEECC
T ss_pred             CCcEEEeCCCc---hHHHHHHHHhCCCCceEEEECCChHH---HHHHHHHhccCCEEEEEc
Confidence            99999999875   67788877753  7999999999988   999999999999999998

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=99.83  E-value=5.7e-20  Score=195.78  Aligned_cols=168  Identities=15%  Similarity=0.023  Sum_probs=123.1

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHP  102 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~  102 (655)
                      +....+.|.+|+.|..++|.+..+-     +..    .-.....+.++|..   .+++++++++||++ ++++|||+++ 
T Consensus        93 ~~~~cg~C~~C~~g~~~~C~~~~~~-----g~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l-  161 (348)
T 2d8a_A           93 THIVCGKCYACRRGQYHVCQNTKIF-----GVD----TDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-EPLGNAVDTV-  161 (348)
T ss_dssp             CEECCSCCC------------CEET-----TTS----SCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-HHHHHHHHHH-
T ss_pred             CCCCCCCChhhhCcCcccCCCCCee-----cCC----CCCcCcceEEeChHHeEECCCCCCHHHHHhh-hHHHHHHHHH-
Confidence            4456788999999998888764421     100    00111222334332   35577889988876 5889999999 


Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--  179 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--  179 (655)
                      +.+++  +|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++|+++++|+++.   ++.+.+++.++  
T Consensus       162 ~~~~~--~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~---~~~~~v~~~~~g~  235 (348)
T 2d8a_A          162 LAGPI--SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEE---DVVKEVMDITDGN  235 (348)
T ss_dssp             TTSCC--TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTS---CHHHHHHHHTTTS
T ss_pred             HhcCC--CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCc---CHHHHHHHHcCCC
Confidence            56666  8999999999 9999999999999999 99999999999999999999999998764   67777877653  


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+|+|++|+. .   ++.++++++++|+++.+|
T Consensus       236 g~D~vid~~g~~~~---~~~~~~~l~~~G~iv~~g  267 (348)
T 2d8a_A          236 GVDVFLEFSGAPKA---LEQGLQAVTPAGRVSLLG  267 (348)
T ss_dssp             CEEEEEECSCCHHH---HHHHHHHEEEEEEEEECC
T ss_pred             CCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEc
Confidence            799999999984 6   899999999999999987

>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}

Probab=99.83  E-value=1.7e-20  Score=197.02  Aligned_cols=128  Identities=19%  Similarity=0.271  Sum_probs=109.8

Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---Cc
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GG  315 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~  315 (655)
                      +|+|++++++...  ......+|||++|++++|+||+|+++|+.|+.+|||||+|||||++...|+|.||||++|   ++
T Consensus       181 ~TRFlvl~~~~~~--~~~~~~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~d~  258 (313)
T 3mwb_A          181 VTRFILVSRPGAL--PERTGADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDADGHATDS  258 (313)
T ss_dssp             EEEEEEEECSCCC--CCCCSSEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEESCTTSH
T ss_pred             eeEEEEEecCCCC--CCCCCCCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEeCCCCcH
Confidence            5789999875321  122334599999999744999999999999999999999999999999999999999999   78


Q ss_pred             hHHHHHHHHHccCCcEEEecCCCCCCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy14589        316 DLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAF  392 (655)
Q Consensus       316 ~v~~~l~~L~~~~~~v~iLGs~~~~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~  392 (655)
                      .++++|++|++.|..+|+||+          ||+...              ......+|.+|++|.++|.|++++..
T Consensus       259 ~v~~aL~~L~~~~~~~kiLGs----------Yp~~~~--------------~~~~~~~~~~~~~~~~~~~w~~~~~~  311 (313)
T 3mwb_A          259 RVADALAGLHRISPATRFLGS----------YARADK--------------QPAVVAPHTSDAAFASAHAWVDSILK  311 (313)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEE----------EECTTC--------------CCCCCCTTCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCcEEEEee----------eecCcc--------------CCcccCCCCCCcchhHHHHHHHHhhc
Confidence            999999999999999999999          998632              23456789999999999999999854

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=99.83  E-value=6.3e-20  Score=194.75  Aligned_cols=193  Identities=16%  Similarity=0.025  Sum_probs=149.5

Q ss_pred             CCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCC
Q psy14589         77 GLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        77 ~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LG  155 (655)
                      .+++++++++||+++++++|||+++.. ..+ ++|++|+|+|+ |++|.+++|+||.+ |++||+++++++|++.++++|
T Consensus       132 ~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~-~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~G  208 (348)
T 4eez_A          132 KVPDGLDPIEASSITCAGVTTYKAIKV-SGV-KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIG  208 (348)
T ss_dssp             BCCTTSCHHHHHHHHHHHHHHHHHHHH-HTC-CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTT
T ss_pred             ecCCCCCHHHHhhcccceeeEEeeecc-cCC-CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcC
Confidence            356789999999999999999999864 456 79999999998 99999999999976 679999999999999999999


Q ss_pred             CcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhh
Q psy14589        156 ADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFF  232 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~  232 (655)
                      |+++||+++.   ++.+++++.++  ++|+++|++|+. +   +..++++++++|+++++|...                
T Consensus       209 a~~~i~~~~~---~~~~~v~~~t~g~g~d~~~~~~~~~~~---~~~~~~~l~~~G~~v~~g~~~----------------  266 (348)
T 4eez_A          209 ADVTINSGDV---NPVDEIKKITGGLGVQSAIVCAVARIA---FEQAVASLKPMGKMVAVAVPN----------------  266 (348)
T ss_dssp             CSEEEEC-CC---CHHHHHHHHTTSSCEEEEEECCSCHHH---HHHHHHTEEEEEEEEECCCCS----------------
T ss_pred             CeEEEeCCCC---CHHHHhhhhcCCCCceEEEEeccCcch---hheeheeecCCceEEEEeccC----------------
Confidence            9999999885   67888888765  899999999887 6   899999999999999987210                


Q ss_pred             hhhhhhhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEec
Q psy14589        233 FFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECA  312 (655)
Q Consensus       233 ~~~~~~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~e  312 (655)
                                    .+. .........+..++..+... ....+.++++.+++++|++ .++.+|+              
T Consensus       267 --------------~~~-~~~~~~~~~~~~~i~gs~~~-~~~~~~~~~~l~~~g~i~p-~~~~~~l--------------  315 (348)
T 4eez_A          267 --------------TEM-TLSVPTVVFDGVEVAGSLVG-TRLDLAEAFQFGAEGKVKP-IVATRKL--------------  315 (348)
T ss_dssp             --------------CEE-EECHHHHHHSCCEEEECCSC-CHHHHHHHHHHHHTTSCCC-CEEEECG--------------
T ss_pred             --------------CCC-ccCHHHHHhCCeEEEEEecC-CHHHHHHHHHHHHcCCCEE-EEEEEeH--------------
Confidence                          000 00000000123456666555 4667999999999999874 3344332              


Q ss_pred             CCchHHHHHHHHHcc
Q psy14589        313 PGGDLSSVIESLRSS  327 (655)
Q Consensus       313 g~~~v~~~l~~L~~~  327 (655)
                        +++.++++.|++.
T Consensus       316 --~~~~~A~~~l~~g  328 (348)
T 4eez_A          316 --EEINDIIDEMKAG  328 (348)
T ss_dssp             --GGHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHCC
Confidence              4577888888764

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=99.82  E-value=4.9e-20  Score=198.27  Aligned_cols=183  Identities=14%  Similarity=0.033  Sum_probs=139.2

Q ss_pred             ccccccccchhHhhhhhhHHHhCC----------CCCCCCCCc--cc--cccc--ccccCCcEEeecC---CCCCCCCHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCG----------YAEDNIPQL--ED--ISKF--LKDSTGFSLRPVA---GLLSSRDFL   85 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~----------y~~~~iP~l--e~--V~~~--l~~~~g~~~~~v~---~l~~~~s~~   85 (655)
                      .+....+.|.+|+.|..++|.+..          +..+.....  ..  +...  ......|.+++..   .++++++++
T Consensus        92 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~  171 (376)
T 1e3i_A           92 FFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLE  171 (376)
T ss_dssp             CSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCHH
T ss_pred             CCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEECCCCCCHH
Confidence            355678999999999888876543          100000000  00  0000  0112223344432   356788999


Q ss_pred             hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCc
Q psy14589         86 AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTI  164 (655)
Q Consensus        86 eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~  164 (655)
                      +||++++++.|||+++.+.+++ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+++
T Consensus       172 ~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~  249 (376)
T 1e3i_A          172 RVCLIGCGFSSGYGAAINTAKV-TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRE  249 (376)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HhhhhccHHHHHHHHHHHhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEcccc
Confidence            9999999999999999888888 89999999997 9999999999999999 8999999999999999999999999874


Q ss_pred             cchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        165 RELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       165 ~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      .. +++.+.+++.++ ++|+|||++|+. .   ++.++++++++ |+++++|
T Consensus       250 ~~-~~~~~~v~~~~~~g~Dvvid~~G~~~~---~~~~~~~l~~~~G~iv~~G  297 (376)
T 1e3i_A          250 LD-KPVQDVITELTAGGVDYSLDCAGTAQT---LKAAVDCTVLGWGSCTVVG  297 (376)
T ss_dssp             CS-SCHHHHHHHHHTSCBSEEEESSCCHHH---HHHHHHTBCTTTCEEEECC
T ss_pred             cc-chHHHHHHHHhCCCccEEEECCCCHHH---HHHHHHHhhcCCCEEEEEC
Confidence            10 156777776543 899999999985 6   89999999999 9999987

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=99.82  E-value=6.5e-20  Score=195.63  Aligned_cols=170  Identities=14%  Similarity=0.046  Sum_probs=131.5

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHP  102 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~  102 (655)
                      +....+.|.+|+.|..++|.+..+.  ..+..      -.....+.+++.   ..+++++++++||. .++++|||+++ 
T Consensus        92 ~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~------~G~~aey~~v~~~~~~~iP~~~~~~~aa~-~~~~~ta~~al-  161 (352)
T 1e3j_A           92 PGVPCRRCQFCKEGKYNLCPDLTFC--ATPPD------DGNLARYYVHAADFCHKLPDNVSLEEGAL-LEPLSVGVHAC-  161 (352)
T ss_dssp             CEECCSSSHHHHTTCGGGCTTCEET--TBTTB------CCSCBSEEEEEGGGEEECCTTSCHHHHHT-HHHHHHHHHHH-
T ss_pred             CcCCCCCChhhhCcCcccCCCCccc--CcCCC------CccceeEEEeChHHeEECcCCCCHHHHHh-hchHHHHHHHH-
Confidence            4456788999999998888764431  00000      011122233333   23557788888775 47889999999 


Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCc-cchhHHHHHHHhcC---
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTI-RELDRFANQILSYG---  178 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~-~~~~d~~~~i~~~~---  178 (655)
                      +.+++ ++|++|||+|+ |+||++++|+||++|++|++++++++|++.++++||++++|+++ .   ++.+.+++.+   
T Consensus       162 ~~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~---~~~~~i~~~~~~~  236 (352)
T 1e3j_A          162 RRAGV-QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAK---EEESSIIERIRSA  236 (352)
T ss_dssp             HHHTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTT---SCHHHHHHHHHHH
T ss_pred             HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccc---cHHHHHHHHhccc
Confidence            56677 89999999997 99999999999999999999999999999999999999999874 3   4555555532   


Q ss_pred             --CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 --SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 --~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        +++|+|+|++|++ .   ++.++++++++|+++.+|
T Consensus       237 ~g~g~D~vid~~g~~~~---~~~~~~~l~~~G~iv~~G  271 (352)
T 1e3j_A          237 IGDLPNVTIDCSGNEKC---ITIGINITRTGGTLMLVG  271 (352)
T ss_dssp             SSSCCSEEEECSCCHHH---HHHHHHHSCTTCEEEECS
T ss_pred             cCCCCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEe
Confidence              4799999999987 6   899999999999999987

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=99.82  E-value=3.9e-20  Score=195.27  Aligned_cols=129  Identities=20%  Similarity=0.117  Sum_probs=120.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|+|+||+|+||++++|+||++|++|++++++++|++.++++|++
T Consensus       109 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~  187 (325)
T 3jyn_A          109 LADSVSFEQAAALMLKGLTVQYLLRQTYQV-KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW  187 (325)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHHHHTTSCC-CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHhhhhhhHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC
Confidence            557889999999999999999999988888 9999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+.+.   ++.+.+.+.++  ++|+|+|++|++.   ++.++++++++|+++.+|
T Consensus       188 ~~~~~~~~---~~~~~~~~~~~~~g~Dvvid~~g~~~---~~~~~~~l~~~G~iv~~g  239 (325)
T 3jyn_A          188 ETIDYSHE---DVAKRVLELTDGKKCPVVYDGVGQDT---WLTSLDSVAPRGLVVSFG  239 (325)
T ss_dssp             EEEETTTS---CHHHHHHHHTTTCCEEEEEESSCGGG---HHHHHTTEEEEEEEEECC
T ss_pred             EEEeCCCc---cHHHHHHHHhCCCCceEEEECCChHH---HHHHHHHhcCCCEEEEEe
Confidence            99999875   67788887754  8999999999988   899999999999999998

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=99.82  E-value=1.3e-19  Score=193.80  Aligned_cols=237  Identities=13%  Similarity=0.042  Sum_probs=162.9

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhcCC
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPSKP  105 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~~~  105 (655)
                      ..+.|..|..|..++|.+..+...... ... .........|.++|..   .+++++++++||++++++.|||+++.+ .
T Consensus        99 ~Cg~C~~c~~g~~~~C~~~~~~~~~~~-~~g-~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~-~  175 (357)
T 2cf5_A           99 CCGGCSPCERDLEQYCPKKIWSYNDVY-ING-QPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSH-F  175 (357)
T ss_dssp             CCSSSHHHHTTCGGGCTTCEETTTSBC-TTS-CBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHHH-T
T ss_pred             CCCCChHHhCcCcccCCCccccccccc-cCC-CCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHHh-c
Confidence            578899999998888854321100000 000 0000111223344432   356788999999999999999999875 4


Q ss_pred             CCCC-CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        106 LYTP-EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       106 ~l~~-~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++ + +|++|+|+|+ |+||++++|+||++|++|++++++++|++.++ ++||++++|+++.      +.+++.++++|+
T Consensus       176 ~~-~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~------~~~~~~~~g~D~  247 (357)
T 2cf5_A          176 GL-KQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQ------AKMSELADSLDY  247 (357)
T ss_dssp             ST-TSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCH------HHHHHSTTTEEE
T ss_pred             CC-CCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccH------HHHHHhcCCCCE
Confidence            56 6 9999999996 99999999999999999999999999999888 9999999998752      234555568999


Q ss_pred             EEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeE
Q psy14589        184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFD  262 (655)
Q Consensus       184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~kt  262 (655)
                      |+|++|++ .   ++.++++++++|+++.+|...                              .+....... ...+..
T Consensus       248 vid~~g~~~~---~~~~~~~l~~~G~iv~~G~~~------------------------------~~~~~~~~~-~~~~~~  293 (357)
T 2cf5_A          248 VIDTVPVHHA---LEPYLSLLKLDGKLILMGVIN------------------------------NPLQFLTPL-LMLGRK  293 (357)
T ss_dssp             EEECCCSCCC---SHHHHTTEEEEEEEEECSCCS------------------------------SCCCCCHHH-HHHHTC
T ss_pred             EEECCCChHH---HHHHHHHhccCCEEEEeCCCC------------------------------CCccccCHH-HHhCcc
Confidence            99999986 7   789999999999999987310                              000000000 000123


Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                      ++..+... ....+.++++.++++++++. ++..|             +   +++.++++.+++..
T Consensus       294 ~i~g~~~~-~~~~~~~~~~l~~~g~l~~~-~~~~~-------------l---~~~~~A~~~~~~~~  341 (357)
T 2cf5_A          294 VITGSFIG-SMKETEEMLEFCKEKGLSSI-IEVVK-------------M---DYVNTAFERLEKND  341 (357)
T ss_dssp             EEEECCSC-CHHHHHHHHHHHHHTTCCCC-EEEEE-------------G---GGHHHHHHHHHTTC
T ss_pred             EEEEEccC-CHHHHHHHHHHHHcCCCCCc-eEEEe-------------H---HHHHHHHHHHHCCC
Confidence            34443333 35578999999999988752 33222             2   45778888887543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=99.82  E-value=7.8e-20  Score=196.38  Aligned_cols=178  Identities=13%  Similarity=0.040  Sum_probs=138.9

Q ss_pred             cccccchhHhhhhhhHHHhCC---C---CCCCCCCc---cc--c-cc--cccccCCcEEeecC---CCCCCCCHHhHhhh
Q psy14589         28 YPTHACKEHNHVFPLLIQNCG---Y---AEDNIPQL---ED--I-SK--FLKDSTGFSLRPVA---GLLSSRDFLAGLAF   90 (655)
Q Consensus        28 l~~~aC~~~~~G~~~l~~~~~---y---~~~~iP~l---e~--V-~~--~l~~~~g~~~~~v~---~l~~~~s~~eAAal   90 (655)
                      ...+.|.+|+.|..++|++..   +   ..++...+   .+  + ..  .......+.+++..   .+++++++++||++
T Consensus        92 ~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  171 (371)
T 1f8f_A           92 GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPL  171 (371)
T ss_dssp             CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTGGG
T ss_pred             CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCCCCHHHHHHh
Confidence            678899999999998887642   1   00111000   00  0 00  00111223344432   35578899999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      ++++.|||+++.+.+++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+.+.   +
T Consensus       172 ~~~~~ta~~al~~~~~~-~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~---~  246 (371)
T 1f8f_A          172 GCGIQTGAGACINALKV-TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQ---D  246 (371)
T ss_dssp             GTHHHHHHHHHHTTTCC-CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTS---C
T ss_pred             cchHHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCcc---C
Confidence            99999999999878888 99999999996 9999999999999999 79999999999999999999999998864   6


Q ss_pred             HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+.+++.++ ++|+|+|++|++ .   ++.++++++++|+++.+|
T Consensus       247 ~~~~~~~~~~gg~D~vid~~g~~~~---~~~~~~~l~~~G~iv~~G  289 (371)
T 1f8f_A          247 PVAAIKEITDGGVNFALESTGSPEI---LKQGVDALGILGKIAVVG  289 (371)
T ss_dssp             HHHHHHHHTTSCEEEEEECSCCHHH---HHHHHHTEEEEEEEEECC
T ss_pred             HHHHHHHhcCCCCcEEEECCCCHHH---HHHHHHHHhcCCEEEEeC
Confidence            7777877654 799999999985 6   899999999999999988

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=99.82  E-value=7.2e-20  Score=196.80  Aligned_cols=181  Identities=12%  Similarity=0.034  Sum_probs=138.5

Q ss_pred             cccccccchhHhhhhhhHHHhCCCC------CCCCCCc--cc--cccc--ccccCCcEEeecCC---CCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYA------EDNIPQL--ED--ISKF--LKDSTGFSLRPVAG---LLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~------~~~iP~l--e~--V~~~--l~~~~g~~~~~v~~---l~~~~s~~eAAal   90 (655)
                      +....+.|.+|+.|..++|.+....      .+..+..  .+  +...  ......|.++|...   ++++++++ ||++
T Consensus        94 ~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa~l  172 (373)
T 1p0f_A           94 FVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLI  172 (373)
T ss_dssp             SSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCCGG-GGGG
T ss_pred             CCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCCChh-hhhh
Confidence            4567889999999988888764320      0000000  00  0000  01122233444332   45778999 9999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      ++++.|||+++.+.+++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+++.. ++
T Consensus       173 ~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~-~~  249 (373)
T 1p0f_A          173 GCGFATGYGAAVNTAKV-TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYD-KP  249 (373)
T ss_dssp             GTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCS-SC
T ss_pred             hhHHHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEeccccc-ch
Confidence            99999999999888888 99999999997 9999999999999999 899999999999999999999999987410 15


Q ss_pred             HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+++.++ ++|+|||++|++ .   ++.++++++++ |+++.+|
T Consensus       250 ~~~~i~~~t~gg~Dvvid~~g~~~~---~~~~~~~l~~~~G~iv~~G  293 (373)
T 1p0f_A          250 IYEVICEKTNGGVDYAVECAGRIET---MMNALQSTYCGSGVTVVLG  293 (373)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHH---HHHHHHTBCTTTCEEEECC
T ss_pred             HHHHHHHHhCCCCCEEEECCCCHHH---HHHHHHHHhcCCCEEEEEc
Confidence            7777777654 899999999985 6   89999999999 9999988

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=99.82  E-value=3e-20  Score=195.78  Aligned_cols=123  Identities=19%  Similarity=0.086  Sum_probs=109.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++ +.+++ ++|++|+|+||+|+||++++|+||++|++|++++ ++++++.++++||+
T Consensus       122 iP~~~~~~~aa~l~~~~~ta~~al-~~~~~-~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~  198 (321)
T 3tqh_A          122 KLEKLSFLQAASLPTAGLTALQAL-NQAEV-KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAE  198 (321)
T ss_dssp             CCTTSCHHHHHHSHHHHHHHHHHH-HHTTC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHhhhhhHHHHHHHHH-HhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCC
Confidence            457889999999999999999999 66788 8999999999889999999999999999999987 56778999999999


Q ss_pred             EEEeCCccchhH-HHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDR-FANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d-~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|+++.   + +.+.+    .++|+|+|++|++.   .+.++++++++|+++.++
T Consensus       199 ~~i~~~~~---~~~~~~~----~g~D~v~d~~g~~~---~~~~~~~l~~~G~iv~~g  245 (321)
T 3tqh_A          199 QCINYHEE---DFLLAIS----TPVDAVIDLVGGDV---GIQSIDCLKETGCIVSVP  245 (321)
T ss_dssp             EEEETTTS---CHHHHCC----SCEEEEEESSCHHH---HHHHGGGEEEEEEEEECC
T ss_pred             EEEeCCCc---chhhhhc----cCCCEEEECCCcHH---HHHHHHhccCCCEEEEeC
Confidence            99999875   3 43333    48999999999988   799999999999999987

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=99.82  E-value=3e-20  Score=198.86  Aligned_cols=239  Identities=13%  Similarity=0.033  Sum_probs=165.4

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+....+.|.+|..|..++|.+..+...  ...      -.....|.+++...   +++ +++++||.+ +++.|||+++
T Consensus       103 ~~~~~cg~C~~c~~g~~~~c~~~~~~g~--~~~------~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-~~~~ta~~~l  172 (363)
T 3m6i_A          103 EPQVICNACEPCLTGRYNGCERVDFLST--PPV------PGLLRRYVNHPAVWCHKIGN-MSYENGAML-EPLSVALAGL  172 (363)
T ss_dssp             CCEECCSCSHHHHTTCGGGCTTCEETTS--TTS------CCSCBSEEEEEGGGEEECTT-CCHHHHHHH-HHHHHHHHHH
T ss_pred             ecccCCCCCHHHHCcCcccCCCccccCC--CCC------CccceeEEEEehhhEEECCC-CCHHHHHhh-hHHHHHHHHH
Confidence            4566788999999998888877554210  000      01112233344322   345 888888877 6889999999


Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCc--cchhHHHHHHHhcC
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTI--RELDRFANQILSYG  178 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~--~~~~d~~~~i~~~~  178 (655)
                       +.+++ ++|++|||+|+ |+||++++|+||++|++ |++++++++|++.++++ ++.++++..  ...+++.+.+++.+
T Consensus       173 -~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t  248 (363)
T 3m6i_A          173 -QRAGV-RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESF  248 (363)
T ss_dssp             -HHHTC-CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHT
T ss_pred             -HHcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHh
Confidence             56677 89999999998 99999999999999996 99999999999999999 777776541  11236888888876


Q ss_pred             C--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCC
Q psy14589        179 S--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHS  255 (655)
Q Consensus       179 ~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~  255 (655)
                      +  ++|+|+|++|++ .   ++.++++++++|+++.+|..                              ..+. .....
T Consensus       249 ~g~g~Dvvid~~g~~~~---~~~~~~~l~~~G~iv~~G~~------------------------------~~~~-~~~~~  294 (363)
T 3m6i_A          249 GGIEPAVALECTGVESS---IAAAIWAVKFGGKVFVIGVG------------------------------KNEI-QIPFM  294 (363)
T ss_dssp             SSCCCSEEEECSCCHHH---HHHHHHHSCTTCEEEECCCC------------------------------CSCC-CCCHH
T ss_pred             CCCCCCEEEECCCChHH---HHHHHHHhcCCCEEEEEccC------------------------------CCCc-cccHH
Confidence            3  899999999998 6   89999999999999998720                              0000 00000


Q ss_pred             CCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589        256 CPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS  327 (655)
Q Consensus       256 ~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~  327 (655)
                      ....+..++..+...  ...+.++++.++++++++..+.++.       |    .   -+++.++++.+++.
T Consensus       295 ~~~~~~~~i~g~~~~--~~~~~~~~~l~~~g~i~~~~~i~~~-------~----~---l~~~~~A~~~~~~~  350 (363)
T 3m6i_A          295 RASVREVDLQFQYRY--CNTWPRAIRLVENGLVDLTRLVTHR-------F----P---LEDALKAFETASDP  350 (363)
T ss_dssp             HHHHHTCEEEECCSC--SSCHHHHHHHHHTTSSCCGGGEEEE-------E----E---GGGHHHHHHHHHCG
T ss_pred             HHHhcCcEEEEccCC--HHHHHHHHHHHHhCCCChHHceeee-------e----e---HHHHHHHHHHHhcc
Confidence            000012344433332  4578999999999999764332110       1    1   24677888888765

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=99.82  E-value=8.2e-20  Score=196.22  Aligned_cols=182  Identities=14%  Similarity=0.048  Sum_probs=139.3

Q ss_pred             cccccccchhHhhhhhhHHHhC------CCCCCCCCCcc--c--cccc--ccccCCcEEeecC---CCCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNC------GYAEDNIPQLE--D--ISKF--LKDSTGFSLRPVA---GLLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~------~y~~~~iP~le--~--V~~~--l~~~~g~~~~~v~---~l~~~~s~~eAAal   90 (655)
                      +....+.|.+|+.|.+++|.+.      ++..+..+...  +  +...  ......|.++|..   .+++++++++||++
T Consensus        92 ~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l  171 (373)
T 2fzw_A           92 YIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLL  171 (373)
T ss_dssp             SSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGG
T ss_pred             CCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCCCHHHHhhh
Confidence            4567889999999988777653      22111111100  0  0000  0111223344432   35678899999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      ++++.|||+++.+.+++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+++.. ++
T Consensus       172 ~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~  248 (373)
T 2fzw_A          172 GCGISTGYGAAVNTAKL-EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFS-KP  248 (373)
T ss_dssp             GTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCS-SC
T ss_pred             ccHHHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccc-cc
Confidence            99999999999888888 99999999997 9999999999999999 899999999999999999999999987410 15


Q ss_pred             HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+++.++ ++|+|+|++|+. .   ++.++++++++ |+++.+|
T Consensus       249 ~~~~v~~~~~~g~D~vid~~g~~~~---~~~~~~~l~~~~G~iv~~G  292 (373)
T 2fzw_A          249 IQEVLIEMTDGGVDYSFECIGNVKV---MRAALEACHKGWGVSVVVG  292 (373)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHH---HHHHHHTBCTTTCEEEECS
T ss_pred             HHHHHHHHhCCCCCEEEECCCcHHH---HHHHHHhhccCCcEEEEEe
Confidence            7777777654 899999999985 6   89999999999 9999988

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=99.82  E-value=1.3e-19  Score=194.84  Aligned_cols=182  Identities=13%  Similarity=0.032  Sum_probs=139.5

Q ss_pred             cccccccchhHhhhhhhHHHhCCCC------CCCCCCc--cc--cccc--ccccCCcEEeecC---CCCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYA------EDNIPQL--ED--ISKF--LKDSTGFSLRPVA---GLLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~------~~~iP~l--e~--V~~~--l~~~~g~~~~~v~---~l~~~~s~~eAAal   90 (655)
                      +....+.|.+|+.|..++|.+....      .+..+..  .+  +...  ......+.++|..   .+++++++++||++
T Consensus        93 ~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l  172 (374)
T 2jhf_A           93 FTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLI  172 (374)
T ss_dssp             SSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGG
T ss_pred             CCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCCCHHHhhhh
Confidence            4567889999999988888765321      0110000  00  0000  0111223344432   35678899999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      ++++.|||+++.+.+++ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+++.. ++
T Consensus       173 ~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~  249 (374)
T 2jhf_A          173 GCGFSTGYGSAVKVAKV-TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYK-KP  249 (374)
T ss_dssp             GTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCS-SC
T ss_pred             ccHHHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccc-hh
Confidence            99999999999888888 89999999996 9999999999999999 899999999999999999999999987410 15


Q ss_pred             HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+++.++ ++|+|+|++|+. .   ++.++++++++ |+++.+|
T Consensus       250 ~~~~~~~~~~~g~D~vid~~g~~~~---~~~~~~~l~~~~G~iv~~G  293 (374)
T 2jhf_A          250 IQEVLTEMSNGGVDFSFEVIGRLDT---MVTALSCCQEAYGVSVIVG  293 (374)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHH---HHHHHHHBCTTTCEEEECS
T ss_pred             HHHHHHHHhCCCCcEEEECCCCHHH---HHHHHHHhhcCCcEEEEec
Confidence            6777777654 899999999985 6   89999999999 9999987

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=99.81  E-value=7.8e-20  Score=194.32  Aligned_cols=169  Identities=15%  Similarity=0.025  Sum_probs=133.1

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+....+.|.+|+.|.+++|++...-     +..    .-.....+.+++..   .+++++++++||++ +++.|||+++
T Consensus        88 ~~~~~cg~C~~C~~g~~~~C~~~~~~-----g~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l  157 (343)
T 2dq4_A           88 ESHIVCHACPACRTGNYHVCLNTQIL-----GVD----RDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTV  157 (343)
T ss_dssp             CCEECCSCSHHHHTTCGGGCTTCEEB-----TTT----BCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHH
T ss_pred             CCCCCCCCChhhhCcCcccCCCccee-----cCC----CCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            34567889999999998888765421     100    00111223334432   24577889888776 6788999999


Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc-CC
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY-GS  179 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~-~~  179 (655)
                      .+.+++  +|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++ +++++|+++.   ++.+.+++. +.
T Consensus       158 ~~~~~~--~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~---~~~~~~~~~~~~  230 (343)
T 2dq4_A          158 YAGSGV--SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEE---DLLEVVRRVTGS  230 (343)
T ss_dssp             HSTTCC--TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTS---CHHHHHHHHHSS
T ss_pred             HHhCCC--CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCcc---CHHHHHHHhcCC
Confidence            756776  8999999999 9999999999999999 999999999999999999 9999998864   566666655 34


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+|+|++|+. .   ++.++++++++|+++.+|
T Consensus       231 g~D~vid~~g~~~~---~~~~~~~l~~~G~iv~~g  262 (343)
T 2dq4_A          231 GVEVLLEFSGNEAA---IHQGLMALIPGGEARILG  262 (343)
T ss_dssp             CEEEEEECSCCHHH---HHHHHHHEEEEEEEEECC
T ss_pred             CCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEe
Confidence            899999999984 6   899999999999999987

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=99.81  E-value=3.4e-19  Score=191.36  Aligned_cols=128  Identities=18%  Similarity=0.168  Sum_probs=116.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCC-----CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTP-----EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA  151 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~-----~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a  151 (655)
                      +++++++++||+++++++|||+++.+.+++ +     +|++|+|+||+|+||++++|+||++ |++|++++++++|++.+
T Consensus       135 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~-~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          135 KPKTLDWAEAAALPLTSITAWEAFFDRLDV-NKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHHTTSCT-TSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhhCc-CcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            457889999999999999999999888888 7     8999999999999999999999984 88999999999999999


Q ss_pred             HhCCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        152 YGLGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       152 ~~LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|||+++|+++    ++.+.+++.++ ++|+|+||+|++ .   ++.++++++++|+++.++
T Consensus       214 ~~lGad~vi~~~~----~~~~~v~~~~~~g~Dvvid~~g~~~~---~~~~~~~l~~~G~iv~~g  270 (363)
T 4dvj_A          214 KSLGAHHVIDHSK----PLAAEVAALGLGAPAFVFSTTHTDKH---AAEIADLIAPQGRFCLID  270 (363)
T ss_dssp             HHTTCSEEECTTS----CHHHHHHTTCSCCEEEEEECSCHHHH---HHHHHHHSCTTCEEEECS
T ss_pred             HHcCCCEEEeCCC----CHHHHHHHhcCCCceEEEECCCchhh---HHHHHHHhcCCCEEEEEC
Confidence            9999999999875    57777877754 899999999987 6   899999999999999876

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=99.81  E-value=3e-19  Score=190.23  Aligned_cols=129  Identities=21%  Similarity=0.160  Sum_probs=116.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCC------CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTP------EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA  151 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~------~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a  151 (655)
                      +++++++++||+++++++|||+++.+.+++ +      +|++|+|+||+|+||++++|+||++|++|++++++++|++.+
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          113 APKNISAEQAVSLPLTGITAYETLFDVFGI-SRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT  191 (346)
T ss_dssp             CCSSSCHHHHTTSHHHHHHHHHHHHTTSCC-CSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred             CCCCCCHHHhhhcchhHHHHHHHHHHhcCC-ccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467899999999999999999999888888 7      899999999889999999999999999999999999999999


Q ss_pred             HhCCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        152 YGLGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       152 ~~LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++||++++|+.+    ++.+.+++..+ ++|+|+||+|++.  .++.++++++++|+++.++
T Consensus       192 ~~lGa~~vi~~~~----~~~~~~~~~~~~g~Dvv~d~~g~~~--~~~~~~~~l~~~G~iv~~~  248 (346)
T 3fbg_A          192 KKMGADIVLNHKE----SLLNQFKTQGIELVDYVFCTFNTDM--YYDDMIQLVKPRGHIATIV  248 (346)
T ss_dssp             HHHTCSEEECTTS----CHHHHHHHHTCCCEEEEEESSCHHH--HHHHHHHHEEEEEEEEESS
T ss_pred             HhcCCcEEEECCc----cHHHHHHHhCCCCccEEEECCCchH--HHHHHHHHhccCCEEEEEC
Confidence            9999999999875    56677776644 8999999999873  1689999999999998865

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=99.81  E-value=1.6e-19  Score=192.24  Aligned_cols=170  Identities=19%  Similarity=0.147  Sum_probs=135.6

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec----CCCCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV----AGLLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v----~~l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      +....+.|.+|+.|..++|.+....     +..    .-.....+.++|.    ..+ +++++++||++++++.|||+++
T Consensus        94 ~~~~Cg~C~~C~~g~~~~C~~~~~~-----G~~----~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l  163 (347)
T 1jvb_A           94 PWQGEGNCYYCRIGEEHLCDSPRWL-----GIN----FDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAV  163 (347)
T ss_dssp             CEECCSSSHHHHTTCGGGCSSCEEB-----TTT----BCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCCCCCChhhhCcCcccCcccccc-----ccc----CCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHH
Confidence            3456788999999988888654321     100    0001111223332    125 7789999999999999999999


Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC--
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG--  178 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~--  178 (655)
                      .+ +++ ++|++|+|+|++|+||++++|+|+++ |++|+++++++++++.++++|++.++|+.+.   ++.+.+.+.+  
T Consensus       164 ~~-~~~-~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~  238 (347)
T 1jvb_A          164 RK-ASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQ---DPLAEIRRITES  238 (347)
T ss_dssp             HH-TTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTS---CHHHHHHHHTTT
T ss_pred             Hh-cCC-CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCc---cHHHHHHHHhcC
Confidence            65 677 89999999999889999999999999 9999999999999999999999999998764   5666666654  


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|+++|++|++ .   ++.++++++++|+++.+|
T Consensus       239 ~~~d~vi~~~g~~~~---~~~~~~~l~~~G~iv~~g  271 (347)
T 1jvb_A          239 KGVDAVIDLNNSEKT---LSVYPKALAKQGKYVMVG  271 (347)
T ss_dssp             SCEEEEEESCCCHHH---HTTGGGGEEEEEEEEECC
T ss_pred             CCceEEEECCCCHHH---HHHHHHHHhcCCEEEEEC
Confidence            4899999999987 6   889999999999999987

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=99.81  E-value=1.2e-19  Score=195.13  Aligned_cols=182  Identities=12%  Similarity=0.013  Sum_probs=138.4

Q ss_pred             cccccccchhHhhhhhhHHHhCCC------CCCCCCCcc--c--cccc--ccccCCcEEeecC---CCCCCCCHHhHhhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGY------AEDNIPQLE--D--ISKF--LKDSTGFSLRPVA---GLLSSRDFLAGLAF   90 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y------~~~~iP~le--~--V~~~--l~~~~g~~~~~v~---~l~~~~s~~eAAal   90 (655)
                      +....+.|.+|+.|..++|.+...      ..+......  +  +...  ......+.++|..   .+++++++++||++
T Consensus        94 ~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l  173 (374)
T 1cdo_A           94 FISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLL  173 (374)
T ss_dssp             SSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHGGG
T ss_pred             CCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCCCCHHHHhhh
Confidence            456788999999998877765421      001100000  0  0000  0112223344432   35678899999999


Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      ++++.|||+++.+.+++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||++++|+++.. ++
T Consensus       174 ~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~  250 (374)
T 1cdo_A          174 GCGVSTGFGAAVNTAKV-EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHS-EP  250 (374)
T ss_dssp             GTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCS-SC
T ss_pred             ccHHHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccc-hh
Confidence            99999999999888888 89999999997 9999999999999999 899999999999999999999999987410 14


Q ss_pred             HHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        170 FANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+++.+ +++|+|+|++|+. .   ++.++++++++ |+++.+|
T Consensus       251 ~~~~~~~~~~~g~D~vid~~g~~~~---~~~~~~~l~~~~G~iv~~G  294 (374)
T 1cdo_A          251 ISQVLSKMTNGGVDFSLECVGNVGV---MRNALESCLKGWGVSVLVG  294 (374)
T ss_dssp             HHHHHHHHHTSCBSEEEECSCCHHH---HHHHHHTBCTTTCEEEECS
T ss_pred             HHHHHHHHhCCCCCEEEECCCCHHH---HHHHHHHhhcCCcEEEEEc
Confidence            666676654 3899999999985 6   89999999999 9999987

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=99.81  E-value=8.4e-20  Score=201.83  Aligned_cols=132  Identities=18%  Similarity=0.126  Sum_probs=116.5

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++++||+++++++|||+++...  +++ ++|++|+|+|++|+||++++|+||++|++|++++++++|++.++++|
T Consensus       195 ~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~-~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lG  273 (456)
T 3krt_A          195 KPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGM-KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMG  273 (456)
T ss_dssp             CCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCC-CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHhhhHHHHHHHHHHhhcccCC-CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhC
Confidence            567889999999999999999998754  778 89999999999999999999999999999999999999999999999


Q ss_pred             CcEEEeCCccch--------------hHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIREL--------------DRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~--------------~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+.++|+.+.+.              +++.+.+++.+  .++|+|+|++|++.   ++.++++++++|+++.+|
T Consensus       274 a~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~---~~~~~~~l~~~G~iv~~G  344 (456)
T 3krt_A          274 AEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRET---FGASVFVTRKGGTITTCA  344 (456)
T ss_dssp             CCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHH---HHHHHHHEEEEEEEEESC
T ss_pred             CcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchh---HHHHHHHhhCCcEEEEEe
Confidence            999999876310              12346677664  38999999999987   899999999999999987

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=99.81  E-value=1.2e-19  Score=193.10  Aligned_cols=234  Identities=13%  Similarity=0.005  Sum_probs=164.8

Q ss_pred             cccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhhhhHHHHHHHHhhcCCC
Q psy14589         30 THACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAFRVFHSTQYIRHPSKPL  106 (655)
Q Consensus        30 ~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL~~~~~  106 (655)
                      .+.|..|+.|..++|.+..+.     +..    .-.....+.+++...   +++++++++||+++++++|||+++.+. +
T Consensus        97 cg~C~~C~~g~~~~C~~~~~~-----g~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~-~  166 (347)
T 2hcy_A           97 CMACEYCELGNESNCPHADLS-----GYT----HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSA-N  166 (347)
T ss_dssp             CSSSTTTTTTCGGGCTTCEEB-----TTT----BCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHTT-T
T ss_pred             CCCChhhhCCCcccCcccccc-----ccC----CCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHhc-C
Confidence            678999999988777654321     110    001112233444332   457889999999999999999999765 7


Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC-CeeEEE
Q psy14589        107 YTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS-ELDADH  185 (655)
Q Consensus       107 l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~  185 (655)
                      + ++|++|+|+|++|++|++++|+|+.+|++|+++++++++++.++++|++.++|+.+.  +++.+.+.+.+. ++|+++
T Consensus       167 ~-~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~--~~~~~~~~~~~~~~~D~vi  243 (347)
T 2hcy_A          167 L-MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKE--KDIVGAVLKATDGGAHGVI  243 (347)
T ss_dssp             C-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTC--SCHHHHHHHHHTSCEEEEE
T ss_pred             C-CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCcc--HhHHHHHHHHhCCCCCEEE
Confidence            7 899999999999999999999999999999999999999999999999999998732  156666665432 799999


Q ss_pred             eCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeEEE
Q psy14589        186 PGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFV  264 (655)
Q Consensus       186 D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~ktsl  264 (655)
                      |++|+. .   ++.++++++++|+++.+|...                              .............+..++
T Consensus       244 ~~~g~~~~---~~~~~~~l~~~G~iv~~g~~~------------------------------~~~~~~~~~~~~~~~~~i  290 (347)
T 2hcy_A          244 NVSVSEAA---IEASTRYVRANGTTVLVGMPA------------------------------GAKCCSDVFNQVVKSISI  290 (347)
T ss_dssp             ECSSCHHH---HHHHTTSEEEEEEEEECCCCT------------------------------TCEEEEEHHHHHHTTCEE
T ss_pred             ECCCcHHH---HHHHHHHHhcCCEEEEEeCCC------------------------------CCCCCCCHHHHhhCCcEE
Confidence            999984 6   889999999999999987310                              000000000000012344


Q ss_pred             EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589        265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS  327 (655)
Q Consensus       265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~  327 (655)
                      ..+... ....+.++++.++++++++. ++..             .+   +++.++++.+++.
T Consensus       291 ~g~~~~-~~~~~~~~~~l~~~g~l~~~-~~~~-------------~l---~~~~~A~~~~~~~  335 (347)
T 2hcy_A          291 VGSYVG-NRADTREALDFFARGLVKSP-IKVV-------------GL---STLPEIYEKMEKG  335 (347)
T ss_dssp             EECCCC-CHHHHHHHHHHHHTTSCCCC-EEEE-------------EG---GGHHHHHHHHHTT
T ss_pred             EEccCC-CHHHHHHHHHHHHhCCCccc-eEEE-------------cH---HHHHHHHHHHHcC
Confidence            444333 35678999999999988752 2222             22   4577888888754

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=99.80  E-value=8e-19  Score=188.51  Aligned_cols=238  Identities=16%  Similarity=0.085  Sum_probs=163.8

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhcCC
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPSKP  105 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~~~  105 (655)
                      ..+.|..|..|..++|.+..+...... ... .........+.++|..   .+++++|+++||++++++.|||+++.+. 
T Consensus       106 ~Cg~C~~c~~g~~~~C~~~~~~~~~~~-~~g-~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~-  182 (366)
T 1yqd_A          106 ACHSCESCANDLENYCPKMILTYASIY-HDG-TITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYF-  182 (366)
T ss_dssp             CCSSSHHHHTTCGGGCTTCEESSSSBC-TTS-CBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHHHT-
T ss_pred             CCCCChhhhCcCcccCCcccccccccc-cCC-CcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhc-
Confidence            578999999998888854321100000 000 0000111223344432   3567889999999999999999999764 


Q ss_pred             CCCC-CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        106 LYTP-EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       106 ~l~~-~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .+ + +|++|+|+|+ |+||++++|+||++|++|+++++++++++.++ ++|++.++|+.+.      +.+.+.++++|+
T Consensus       183 ~~-~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~------~~~~~~~~~~D~  254 (366)
T 1yqd_A          183 GL-DEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ------EQMQAAAGTLDG  254 (366)
T ss_dssp             TC-CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCH------HHHHHTTTCEEE
T ss_pred             Cc-CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCH------HHHHHhhCCCCE
Confidence            56 6 9999999997 99999999999999999999999999998887 9999999998752      234455568999


Q ss_pred             EEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeE
Q psy14589        184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFD  262 (655)
Q Consensus       184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~kt  262 (655)
                      |+|++|+. .   ++.++++++++|+++.++...                              .+. .........+..
T Consensus       255 vid~~g~~~~---~~~~~~~l~~~G~iv~~g~~~------------------------------~~~-~~~~~~~~~~~~  300 (366)
T 1yqd_A          255 IIDTVSAVHP---LLPLFGLLKSHGKLILVGAPE------------------------------KPL-ELPAFSLIAGRK  300 (366)
T ss_dssp             EEECCSSCCC---SHHHHHHEEEEEEEEECCCCS------------------------------SCE-EECHHHHHTTTC
T ss_pred             EEECCCcHHH---HHHHHHHHhcCCEEEEEccCC------------------------------CCC-CcCHHHHHhCCc
Confidence            99999986 6   789999999999999987310                              000 000000001223


Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS  329 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~  329 (655)
                      ++..+... ....+.++++.++++++++. ++..|                -+++.++++.+++...
T Consensus       301 ~i~g~~~~-~~~~~~~~~~l~~~g~l~~~-~~~~~----------------l~~~~~A~~~~~~~~~  349 (366)
T 1yqd_A          301 IVAGSGIG-GMKETQEMIDFAAKHNITAD-IEVIS----------------TDYLNTAMERLAKNDV  349 (366)
T ss_dssp             EEEECCSC-CHHHHHHHHHHHHHTTCCCC-EEEEC----------------GGGHHHHHHHHHTTCC
T ss_pred             EEEEecCC-CHHHHHHHHHHHHcCCCCCc-eEEEc----------------HHHHHHHHHHHHcCCc
Confidence            44444333 35578999999999988753 32222                2457788888876543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=99.80  E-value=8.5e-20  Score=193.82  Aligned_cols=129  Identities=15%  Similarity=0.138  Sum_probs=118.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|+|+|++|+||++++|+||++|++|+++++++++++.++++|++
T Consensus       113 vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~-~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~  191 (340)
T 3gms_A          113 IPDSIDDFTAAQMYINPLTAWVTCTETLNL-QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA  191 (340)
T ss_dssp             CCTTSCHHHHTTSSHHHHHHHHHHHTTSCC-CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS
T ss_pred             CCCCCCHHHHhhhcchHHHHHHHHHHhccc-CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc
Confidence            567899999999999999999999888898 9999999999988999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+.+.   ++.+.+.+.++  ++|+|+|++|++.   ...++++++++|+++.+|
T Consensus       192 ~~~~~~~~---~~~~~~~~~~~~~g~Dvvid~~g~~~---~~~~~~~l~~~G~iv~~G  243 (340)
T 3gms_A          192 YVIDTSTA---PLYETVMELTNGIGADAAIDSIGGPD---GNELAFSLRPNGHFLTIG  243 (340)
T ss_dssp             EEEETTTS---CHHHHHHHHTTTSCEEEEEESSCHHH---HHHHHHTEEEEEEEEECC
T ss_pred             EEEeCCcc---cHHHHHHHHhCCCCCcEEEECCCChh---HHHHHHHhcCCCEEEEEe
Confidence            99998875   67788887754  8999999999987   677889999999999998

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=99.80  E-value=1.8e-19  Score=195.39  Aligned_cols=182  Identities=15%  Similarity=0.097  Sum_probs=134.1

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCC-CCCCcccccccccccCCcEEeecC-----CCCCCCCHHh----HhhhhhHHH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAED-NIPQLEDISKFLKDSTGFSLRPVA-----GLLSSRDFLA----GLAFRVFHS   95 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~-~iP~le~V~~~l~~~~g~~~~~v~-----~l~~~~s~~e----AAal~~a~~   95 (655)
                      +....+.|.+|+.|.+++|.+...... ...+.............|.+++..     .+++++++++    +|+++++++
T Consensus        93 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~  172 (398)
T 1kol_A           93 FNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILP  172 (398)
T ss_dssp             SEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHH
T ss_pred             CcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcchhhhcccccccccHHH
Confidence            345678999999999988876542100 000110000000111223344422     2445567777    789999999


Q ss_pred             HHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHH
Q psy14589         96 TQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQI  174 (655)
Q Consensus        96 TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i  174 (655)
                      |||+++. .+++ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||+ +||+++.  +++.+.+
T Consensus       173 ta~~al~-~~~~-~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~--~~~~~~v  246 (398)
T 1kol_A          173 TGYHGAV-TAGV-GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADLSLD--TPLHEQI  246 (398)
T ss_dssp             HHHHHHH-HTTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEETTSS--SCHHHHH
T ss_pred             HHHHHHH-HcCC-CCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEccCCc--chHHHHH
Confidence            9999996 5677 89999999996 9999999999999999 799999999999999999997 8898764  1367777


Q ss_pred             HhcCC--CeeEEEeCCCcch-------------HHHHHHHHHHhccccceEEEe
Q psy14589        175 LSYGS--ELDADHPGFTDPV-------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~--gvDvV~D~vG~~~-------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++  ++|+|||++|++.             ...++.++++++++|+++++|
T Consensus       247 ~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G  300 (398)
T 1kol_A          247 AALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG  300 (398)
T ss_dssp             HHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred             HHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence            77643  7999999999751             012889999999999999987

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=99.80  E-value=4.4e-19  Score=187.73  Aligned_cols=201  Identities=14%  Similarity=0.000  Sum_probs=150.6

Q ss_pred             CCCCCCHHhH--hhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhC
Q psy14589         78 LLSSRDFLAG--LAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGL  154 (655)
Q Consensus        78 l~~~~s~~eA--Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~L  154 (655)
                      +++++++.++  |+++++++|||+++.+.+++ ++|++|+|+|++|+||++++|+||++|++|+++++++++++.+ +++
T Consensus       116 ~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~-~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~  194 (336)
T 4b7c_A          116 VDPSRAPLPRYLSALGMTGMTAYFALLDVGQP-KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL  194 (336)
T ss_dssp             ECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT
T ss_pred             cCCCCCchHHHhhhcccHHHHHHHHHHHhcCC-CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            3456766666  88999999999999888888 9999999999999999999999999999999999999999999 899


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhh
Q psy14589        155 GADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFF  233 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~  233 (655)
                      |++.++|+.+.   ++.+.+.+.++ ++|+++|++|++.   ++.++++++++|+++.+|...                 
T Consensus       195 g~~~~~~~~~~---~~~~~~~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~iv~~G~~~-----------------  251 (336)
T 4b7c_A          195 GFDGAIDYKNE---DLAAGLKRECPKGIDVFFDNVGGEI---LDTVLTRIAFKARIVLCGAIS-----------------  251 (336)
T ss_dssp             CCSEEEETTTS---CHHHHHHHHCTTCEEEEEESSCHHH---HHHHHTTEEEEEEEEECCCGG-----------------
T ss_pred             CCCEEEECCCH---HHHHHHHHhcCCCceEEEECCCcch---HHHHHHHHhhCCEEEEEeecc-----------------
Confidence            99999998875   67777777654 8999999999887   899999999999999998310                 


Q ss_pred             hhhhhhhheeeccccccccCCCCC---CCCeEEEEEEccCC----CcchHHHHHHHHHhCCcceeeeecccCCCCCcceE
Q psy14589        234 FFFFYFFYFLLLSQPLIQSCHSCP---FSLFDFVIFSNHQD----EVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYE  306 (655)
Q Consensus       234 ~~~~~~~~F~ll~~p~~~~~~~~~---~~~ktsl~f~l~~d----~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~  306 (655)
                        .        .............   ..+..++..+...+    .+..+.++++.++++++++....+.|         
T Consensus       252 --~--------~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~---------  312 (336)
T 4b7c_A          252 --Q--------YNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEG---------  312 (336)
T ss_dssp             --G--------GC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEEC---------
T ss_pred             --c--------ccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecC---------
Confidence              0        0000000000000   01223444332210    13678899999999999876554433         


Q ss_pred             EEEEecCCchHHHHHHHHHccC
Q psy14589        307 FMVECAPGGDLSSVIESLRSSC  328 (655)
Q Consensus       307 FfVd~eg~~~v~~~l~~L~~~~  328 (655)
                             -+++.++++.+++..
T Consensus       313 -------l~~~~~A~~~~~~~~  327 (336)
T 4b7c_A          313 -------LETFPETLLKLFSGE  327 (336)
T ss_dssp             -------GGGHHHHHHHHHTTC
T ss_pred             -------HHHHHHHHHHHHcCC
Confidence                   245778888887543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.80  E-value=4e-20  Score=217.57  Aligned_cols=195  Identities=14%  Similarity=0.072  Sum_probs=151.3

Q ss_pred             CChhhhhhHHhhhh-----ccccccccccchhHhhhhhhHHHhCCCCCCCCCCcc---cccccccccCCcE---------
Q psy14589          9 YTAEETKTWGEVFR-----NLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLE---DISKFLKDSTGFS---------   71 (655)
Q Consensus         9 y~~~e~~~W~~~~~-----~~~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le---~V~~~l~~~~g~~---------   71 (655)
                      |+..|...|.+...     ...+++.+..+.+.+-. |++...+.++...+++.|   .|.+++..+++++         
T Consensus       218 ~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~-D~~~~~G~~~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~  296 (795)
T 3slk_A          218 PGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFR-DALIALGMYPGVASLGSEGAGVVVETGPGVTGLAPGDRVMGMI  296 (795)
T ss_dssp             TTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHH-HHHHTTTCCSSCCCSCCCEEEEEEEECSSCCSSCTTCEEEECC
T ss_pred             CCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHH-HHHHHcCCCCCCccccceeEEEEEEeCCCCCcCCCCCEEEEEe
Confidence            45556666665432     12455556655555543 777777777666667766   3333344443332         


Q ss_pred             --------Eeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEE
Q psy14589         72 --------LRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFA  140 (655)
Q Consensus        72 --------~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Via  140 (655)
                              +++.   ..+++++++++||+++++++|||+++.+.+++ ++|++|||+||+|+||++++|+||++|++|++
T Consensus       297 ~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l-~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~  375 (795)
T 3slk_A          297 PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGL-RPGESLLVHSAAGGVGMAAIQLARHLGAEVYA  375 (795)
T ss_dssp             SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCC-CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEE
T ss_pred             cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCC-CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEE
Confidence                    2222   22567899999999999999999999999999 99999999999999999999999999999999


Q ss_pred             EecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        141 SVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       141 t~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++++ |.+.++ +|+++++|+++.   ++.+.+++.++  |+|+|+|++|++.   ++.++++++++||+|.+|
T Consensus       376 t~~~~-k~~~l~-lga~~v~~~~~~---~~~~~i~~~t~g~GvDvVld~~gg~~---~~~~l~~l~~~Gr~v~iG  442 (795)
T 3slk_A          376 TASED-KWQAVE-LSREHLASSRTC---DFEQQFLGATGGRGVDVVLNSLAGEF---ADASLRMLPRGGRFLELG  442 (795)
T ss_dssp             ECCGG-GGGGSC-SCGGGEECSSSS---THHHHHHHHSCSSCCSEEEECCCTTT---THHHHTSCTTCEEEEECC
T ss_pred             EeChH-Hhhhhh-cChhheeecCCh---hHHHHHHHHcCCCCeEEEEECCCcHH---HHHHHHHhcCCCEEEEec
Confidence            98655 666555 999999998875   78888888764  8999999999998   899999999999999998

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=99.80  E-value=1.1e-19  Score=194.54  Aligned_cols=129  Identities=17%  Similarity=0.094  Sum_probs=111.4

Q ss_pred             CCCHHhHhhhhhHHHHHHHHhhcCCCCCCCC-CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH----HHHHHhCC
Q psy14589         81 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP-DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG----VAKAYGLG  155 (655)
Q Consensus        81 ~~s~~eAAal~~a~~TA~~aL~~~~~l~~~G-d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k----~~~a~~LG  155 (655)
                      ++++++||+++++++|||+++.+.+++ ++| ++|+|+||+|+||++++|+||++|++|+++++++++    ++.++++|
T Consensus       138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG  216 (364)
T 1gu7_A          138 GLTINQGATISVNPLTAYLMLTHYVKL-TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG  216 (364)
T ss_dssp             CCCHHHHHTCTTHHHHHHHHHHSSSCC-CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred             CCCHHHHhhccccHHHHHHHHHHhhcc-CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcC
Confidence            689999999999999999999887788 899 999999999999999999999999999999876654    67789999


Q ss_pred             CcEEEeCCccchhHHHHHHHhcC----CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRELDRFANQILSYG----SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~----~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++++|+++...+++.+.+++.+    +++|+||||+|++.   ...++++++++|+++.+|
T Consensus       217 a~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~---~~~~~~~l~~~G~~v~~g  275 (364)
T 1gu7_A          217 ATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS---STGIARKLNNNGLMLTYG  275 (364)
T ss_dssp             CSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH---HHHHHHTSCTTCEEEECC
T ss_pred             CeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh---HHHHHHHhccCCEEEEec
Confidence            99999986410015666776654    48999999999986   568899999999999987

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=99.79  E-value=5.8e-20  Score=196.49  Aligned_cols=165  Identities=14%  Similarity=0.027  Sum_probs=127.7

Q ss_pred             cccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhcCCC
Q psy14589         30 THACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPSKPL  106 (655)
Q Consensus        30 ~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~~~~  106 (655)
                      .+.|.+|+.|..++|.+..+-....+.      .-.....+.+++..   .++++++  ++|+++++++|||+++ +.++
T Consensus        93 cg~C~~C~~g~~~~C~~~~~~~~g~~~------~~G~~aey~~v~~~~~~~iP~~~~--~~aal~~~~~ta~~al-~~~~  163 (357)
T 2b5w_A           93 SGTNEYFERDQPDMAPDGMYFERGIVG------AHGYMSEFFTSPEKYLVRIPRSQA--ELGFLIEPISITEKAL-EHAY  163 (357)
T ss_dssp             TCCCHHHHTTCGGGCCTTSCEEETTBE------ECCSCBSEEEEEGGGEEECCGGGS--TTGGGHHHHHHHHHHH-HHHH
T ss_pred             CCCChHHhCcCcccCCCCcccccCccC------CCcceeeEEEEchHHeEECCCCcc--hhhhhhchHHHHHHHH-HhcC
Confidence            788999999998888765431000000      00111223334432   2445667  5678999999999999 4567


Q ss_pred             CCCCC------CEEEEEcCCCchHHHH-HHHH-HHcCCe-EEEEecChH---HHHHHHhCCCcEEEeCCccchhHHHHHH
Q psy14589        107 YTPEP------DTLFIIGANRGNGLAA-IQVG-KAYGLT-VFASVGCPV---GVAKAYGLGADYVVDHTIRELDRFANQI  174 (655)
Q Consensus       107 l~~~G------d~VLI~GasGgVG~~a-vQlA-k~~Ga~-Viat~~s~~---k~~~a~~LGAd~vId~~~~~~~d~~~~i  174 (655)
                      + ++|      ++|+|+|+ |+||+++ +|+| |++|++ |++++++++   |++.++++||+++ |+++.   ++.+ +
T Consensus       164 ~-~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~---~~~~-i  236 (357)
T 2b5w_A          164 A-SRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQT---PVED-V  236 (357)
T ss_dssp             H-TTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTS---CGGG-H
T ss_pred             C-CCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCcc---CHHH-H
Confidence            7 789      99999999 9999999 9999 999997 999999998   9999999999999 98864   4544 5


Q ss_pred             HhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        175 LSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++..+++|+|||++|++ .   ++.++++++++|+++.+|
T Consensus       237 ~~~~gg~Dvvid~~g~~~~---~~~~~~~l~~~G~iv~~g  273 (357)
T 2b5w_A          237 PDVYEQMDFIYEATGFPKH---AIQSVQALAPNGVGALLG  273 (357)
T ss_dssp             HHHSCCEEEEEECSCCHHH---HHHHHHHEEEEEEEEECC
T ss_pred             HHhCCCCCEEEECCCChHH---HHHHHHHHhcCCEEEEEe
Confidence            54433899999999987 6   899999999999999987

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=99.79  E-value=4.4e-19  Score=189.59  Aligned_cols=129  Identities=16%  Similarity=0.112  Sum_probs=118.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|+|+||+|+||++++|+|+..|++|+++++++++++.++++|++
T Consensus       131 iP~~ls~~~aa~l~~~~~tA~~al~~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~  209 (354)
T 2j8z_A          131 IPEGLTLTQAAAIPEAWLTAFQLLHLVGNV-QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA  209 (354)
T ss_dssp             CCTTCCHHHHTTSHHHHHHHHHHHTTTSCC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHHhccchHHHHHHHHHHhcCC-CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc
Confidence            567889999999999999999999888888 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+.+.   ++.+.+.+.++  ++|+++|++|++.   ++.++++++++|+++.+|
T Consensus       210 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~G~~~---~~~~~~~l~~~G~iv~~G  261 (354)
T 2j8z_A          210 AGFNYKKE---DFSEATLKFTKGAGVNLILDCIGGSY---WEKNVNCLALDGRWVLYG  261 (354)
T ss_dssp             EEEETTTS---CHHHHHHHHTTTSCEEEEEESSCGGG---HHHHHHHEEEEEEEEECC
T ss_pred             EEEecCCh---HHHHHHHHHhcCCCceEEEECCCchH---HHHHHHhccCCCEEEEEe
Confidence            99998864   56777776643  7999999999988   899999999999999987

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=99.79  E-value=1.8e-19  Score=195.60  Aligned_cols=180  Identities=13%  Similarity=0.025  Sum_probs=133.9

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCC---CCCCcccccccccccCCcEEeec-----CCCCCCCCHHh----HhhhhhH
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAED---NIPQLEDISKFLKDSTGFSLRPV-----AGLLSSRDFLA----GLAFRVF   93 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~---~iP~le~V~~~l~~~~g~~~~~v-----~~l~~~~s~~e----AAal~~a   93 (655)
                      +.+..+.|.+|+.|.+++|++..+...   ...+. .+.........|.+++.     ..+++++++++    ||+++++
T Consensus        92 ~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~-~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~  170 (398)
T 2dph_A           92 FNVACGRCRNCKEARSDVCENNLVNPDADLGAFGF-DLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDI  170 (398)
T ss_dssp             SBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTT-TBSSCCCSSBSEEEESSHHHHCEECSSHHHHHHTHHHHTTTTTH
T ss_pred             CCCCCCCChhhhCcCcccCCCcccccccccccccc-ccCCCCceeeeeEEeccccCeEEECCCCCChhhhcchhhhhcCH
Confidence            456778999999999988876111100   00011 00000011122334442     23455677887    8999999


Q ss_pred             HHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHH-H
Q psy14589         94 HSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRF-A  171 (655)
Q Consensus        94 ~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~-~  171 (655)
                      ++|||+++ +.+++ ++|++|||+|+ |+||++++|+||++|+ +|++++++++|++.++++||+ ++|+.+.   ++ .
T Consensus       171 ~~ta~~al-~~~~~-~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~---~~~~  243 (398)
T 2dph_A          171 LPTGFHGC-VSAGV-KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDLRNS---APLR  243 (398)
T ss_dssp             HHHHHHHH-HHTTC-CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEETTSS---SCHH
T ss_pred             HHHHHHHH-HHcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcCCCc---chHH
Confidence            99999999 56778 89999999997 9999999999999999 999999999999999999996 8998764   44 6


Q ss_pred             HHHHhcCC--CeeEEEeCCCcch------------HHHHHHHHHHhccccceEEEe
Q psy14589        172 NQILSYGS--ELDADHPGFTDPV------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       172 ~~i~~~~~--gvDvV~D~vG~~~------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+++.++  ++|+|||++|++.            ...++.++++++++|+++++|
T Consensus       244 ~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G  299 (398)
T 2dph_A          244 DQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG  299 (398)
T ss_dssp             HHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred             HHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence            66766543  7999999999751            013899999999999999987

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=99.79  E-value=4.7e-19  Score=189.37  Aligned_cols=129  Identities=23%  Similarity=0.275  Sum_probs=117.6

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|+|+|++|++|++++|+|+.+|++|+++++++++++.++++|++
T Consensus       139 ~P~~l~~~~aA~l~~~~~ta~~al~~~~~~-~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~  217 (351)
T 1yb5_A          139 LPEKLDFKQGAAIGIPYFTAYRALIHSACV-KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH  217 (351)
T ss_dssp             CCTTSCHHHHTTTHHHHHHHHHHHHTTSCC-CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhhCC-CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC
Confidence            567889999999999999999999878888 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+.+.   ++.+.+.+.++  ++|+++|++|++.   ++.++++++++|+++.+|
T Consensus       218 ~~~d~~~~---~~~~~~~~~~~~~~~D~vi~~~G~~~---~~~~~~~l~~~G~iv~~g  269 (351)
T 1yb5_A          218 EVFNHREV---NYIDKIKKYVGEKGIDIIIEMLANVN---LSKDLSLLSHGGRVIVVG  269 (351)
T ss_dssp             EEEETTST---THHHHHHHHHCTTCEEEEEESCHHHH---HHHHHHHEEEEEEEEECC
T ss_pred             EEEeCCCc---hHHHHHHHHcCCCCcEEEEECCChHH---HHHHHHhccCCCEEEEEe
Confidence            99998864   56667766532  7999999999887   889999999999999987

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=99.79  E-value=3.7e-19  Score=195.87  Aligned_cols=201  Identities=15%  Similarity=0.019  Sum_probs=147.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++++||+++++++|||+++...  +++ ++|++|+|+|++|+||++++|+||++|++|++++++++|++.++++|
T Consensus       187 iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~-~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lG  265 (447)
T 4a0s_A          187 KPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQM-KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALG  265 (447)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCC-CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHhHHHHHHHHHHHHhhhccCC-CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC
Confidence            567899999999999999999999743  788 89999999999999999999999999999999999999999999999


Q ss_pred             CcEEEeCCccch---------------hHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchh
Q psy14589        156 ADYVVDHTIREL---------------DRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFF  219 (655)
Q Consensus       156 Ad~vId~~~~~~---------------~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~  219 (655)
                      |+.++|+.+.+.               +.+.+.+++.++ ++|+|+|++|++.   ++.++++++++|+++.+|...   
T Consensus       266 a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~---~~~~~~~l~~~G~iv~~G~~~---  339 (447)
T 4a0s_A          266 CDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT---FGLSVIVARRGGTVVTCGSSS---  339 (447)
T ss_dssp             CCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHH---HHHHHHHSCTTCEEEESCCTT---
T ss_pred             CCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchH---HHHHHHHHhcCCEEEEEecCC---
Confidence            999998754210               112556665544 8999999999987   899999999999999987210   


Q ss_pred             hhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCC
Q psy14589        220 FFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSST  299 (655)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~  299 (655)
                                                 .............+..++..+... ....+.++++++++++|+...-...|  
T Consensus       340 ---------------------------~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~l~~~g~l~~~i~~~~~--  389 (447)
T 4a0s_A          340 ---------------------------GYLHTFDNRYLWMKLKKIVGSHGA-NHEEQQATNRLFESGAVVPAMSAVYP--  389 (447)
T ss_dssp             ---------------------------CSEEEEEHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTSSCCCEEEEEE--
T ss_pred             ---------------------------CcccccCHHHHHhCCCEEEecCCC-CHHHHHHHHHHHHcCCcccceeEEEc--
Confidence                                       000000000000011244444444 45678899999999988632111111  


Q ss_pred             CCCcceEEEEEecCCchHHHHHHHHHccCC
Q psy14589        300 RIENNYEFMVECAPGGDLSSVIESLRSSCS  329 (655)
Q Consensus       300 ~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~  329 (655)
                                    -+++.++++.+++...
T Consensus       390 --------------l~~~~~A~~~~~~~~~  405 (447)
T 4a0s_A          390 --------------LAEAAEACRVVQTSRQ  405 (447)
T ss_dssp             --------------GGGHHHHHHHHHTTCC
T ss_pred             --------------HHHHHHHHHHHhcCCC
Confidence                          2567788888876543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=99.78  E-value=1.3e-18  Score=183.36  Aligned_cols=129  Identities=17%  Similarity=0.090  Sum_probs=117.3

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|+|+||+|++|++++|+|+..|++|+++++++++++.++++|++
T Consensus       109 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~  187 (327)
T 1qor_A          109 LPAAISFEQAAASFLKGLTVYYLLRKTYEI-KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW  187 (327)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHHHHTTSCC-CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHHHhhhHHHHHHHHHHHhhCC-CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence            557889999999999999999999878888 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+.+.   ++.+.+.+.++  ++|+++|++|++.   ++.++++++++|+++.+|
T Consensus       188 ~~~~~~~~---~~~~~~~~~~~~~~~D~vi~~~g~~~---~~~~~~~l~~~G~iv~~g  239 (327)
T 1qor_A          188 QVINYREE---DLVERLKEITGGKKVRVVYDSVGRDT---WERSLDCLQRRGLMVSFG  239 (327)
T ss_dssp             EEEETTTS---CHHHHHHHHTTTCCEEEEEECSCGGG---HHHHHHTEEEEEEEEECC
T ss_pred             EEEECCCc---cHHHHHHHHhCCCCceEEEECCchHH---HHHHHHHhcCCCEEEEEe
Confidence            99998764   56667766542  7999999999778   899999999999999987

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=99.77  E-value=1.7e-18  Score=184.18  Aligned_cols=126  Identities=18%  Similarity=0.161  Sum_probs=113.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|||+||+|+||++++|+||++|++|+++ +++++++.++++|++
T Consensus       119 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~  196 (343)
T 3gaz_A          119 KPAALTMRQASVLPLVFITAWEGLVDRAQV-QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGAT  196 (343)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHTTTTCC-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSE
T ss_pred             CCCCCCHHHHHHhhhhHHHHHHHHHHhcCC-CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCC
Confidence            457889999999999999999999888888 999999999999999999999999999999999 889999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      . || ...   ++.+.+.+.++  ++|+|+|++|++.   ++.++++++++|+++.++
T Consensus       197 ~-i~-~~~---~~~~~~~~~~~~~g~D~vid~~g~~~---~~~~~~~l~~~G~iv~~g  246 (343)
T 3gaz_A          197 P-ID-ASR---EPEDYAAEHTAGQGFDLVYDTLGGPV---LDASFSAVKRFGHVVSCL  246 (343)
T ss_dssp             E-EE-TTS---CHHHHHHHHHTTSCEEEEEESSCTHH---HHHHHHHEEEEEEEEESC
T ss_pred             E-ec-cCC---CHHHHHHHHhcCCCceEEEECCCcHH---HHHHHHHHhcCCeEEEEc
Confidence            9 88 433   56677766543  8999999999887   899999999999999987

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.76  E-value=2.9e-18  Score=167.64  Aligned_cols=130  Identities=18%  Similarity=0.178  Sum_probs=110.5

Q ss_pred             CCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC
Q psy14589         77 GLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        77 ~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA  156 (655)
                      .+++++++++||+++++++|||+++.+.+++ ++|++|+|+||+||+|++++|+++..|++|+++++++++.+.++++|+
T Consensus         6 ~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~   84 (198)
T 1pqw_A            6 PIPDTLADNEAATFGVAYLTAWHSLCEVGRL-SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV   84 (198)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHTTSCC-CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC
T ss_pred             ECCCCCCHHHHHHhhHHHHHHHHHHHHHhCC-CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence            3456788999999999999999999877888 899999999999999999999999999999999999999989999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.++|+.+.   +..+.+.+..  +++|+++|++|+..   ++.++++++++|+++.+|
T Consensus        85 ~~~~d~~~~---~~~~~~~~~~~~~~~D~vi~~~g~~~---~~~~~~~l~~~G~~v~~g  137 (198)
T 1pqw_A           85 EYVGDSRSV---DFADEILELTDGYGVDVVLNSLAGEA---IQRGVQILAPGGRFIELG  137 (198)
T ss_dssp             SEEEETTCS---THHHHHHHHTTTCCEEEEEECCCTHH---HHHHHHTEEEEEEEEECS
T ss_pred             CEEeeCCcH---HHHHHHHHHhCCCCCeEEEECCchHH---HHHHHHHhccCCEEEEEc
Confidence            999998764   5566666553  37999999999777   899999999999999988

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=99.76  E-value=3.5e-18  Score=183.83  Aligned_cols=129  Identities=17%  Similarity=0.127  Sum_probs=114.4

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcC-CCC--------C--CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSK-PLY--------T--PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV  146 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~-~~l--------~--~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~  146 (655)
                      +++++++++||++++++.|||+++.+. .++        .  ++|++|+|+|++|+||++++|+||++|++|++++ +++
T Consensus       121 ~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~  199 (371)
T 3gqv_A          121 IPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH  199 (371)
T ss_dssp             CCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG
T ss_pred             CCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH
Confidence            457889999999999999999999665 331        1  5899999999999999999999999999999986 789


Q ss_pred             HHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHh-ccccceEEEe
Q psy14589        147 GVAKAYGLGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADL-AFNYKHFFFF  213 (655)
Q Consensus       147 k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l-~~gGrlv~v~  213 (655)
                      |++.++++||++++|+++.   ++.+.+++.++ ++|+|+|++|++ .   ++.+++++ +++||++.+|
T Consensus       200 ~~~~~~~lGa~~vi~~~~~---~~~~~v~~~t~g~~d~v~d~~g~~~~---~~~~~~~l~~~~G~iv~~g  263 (371)
T 3gqv_A          200 NFDLAKSRGAEEVFDYRAP---NLAQTIRTYTKNNLRYALDCITNVES---TTFCFAAIGRAGGHYVSLN  263 (371)
T ss_dssp             GHHHHHHTTCSEEEETTST---THHHHHHHHTTTCCCEEEESSCSHHH---HHHHHHHSCTTCEEEEESS
T ss_pred             HHHHHHHcCCcEEEECCCc---hHHHHHHHHccCCccEEEECCCchHH---HHHHHHHhhcCCCEEEEEe
Confidence            9999999999999999875   78888888764 799999999985 6   89999999 5999999987

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=99.76  E-value=9.3e-19  Score=186.61  Aligned_cols=126  Identities=14%  Similarity=0.092  Sum_probs=106.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|+|+|++|++|++++|+||++| ++|++++ +++|++.++ +|+
T Consensus       111 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga  187 (349)
T 4a27_A          111 IPDDMSFSEAAAFPMNFVTAYVMLFEVANL-REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSV  187 (349)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHHTTSCC-CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGS
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCC
Confidence            557889999999999999999999888888 999999999999999999999999996 5898887 677888888 999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++| .+.   ++.+.+++.++ ++|+|+||+|++.   ++.++++++++||++.+|
T Consensus       188 ~~~~~-~~~---~~~~~~~~~~~~g~Dvv~d~~g~~~---~~~~~~~l~~~G~~v~~G  238 (349)
T 4a27_A          188 THLFD-RNA---DYVQEVKRISAEGVDIVLDCLCGDN---TGKGLSLLKPLGTYILYG  238 (349)
T ss_dssp             SEEEE-TTS---CHHHHHHHHCTTCEEEEEEECC----------CTTEEEEEEEEEEC
T ss_pred             cEEEc-CCc---cHHHHHHHhcCCCceEEEECCCchh---HHHHHHHhhcCCEEEEEC
Confidence            99999 443   67778877765 8999999999988   789999999999999998

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=99.75  E-value=3.5e-18  Score=183.91  Aligned_cols=129  Identities=19%  Similarity=0.085  Sum_probs=114.2

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCC----CCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPL----YTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG  153 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~----l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~  153 (655)
                      +++++++++||+++++++|||+++.+.++    + ++|++|+|+||+|+||++++|+||++|++|++++ ++++++.+++
T Consensus       148 iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~-~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~  225 (375)
T 2vn8_A          148 KPKSLTHTQAASLPYVALTAWSAINKVGGLNDKN-CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK  225 (375)
T ss_dssp             CCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTT-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH
T ss_pred             CCCCCCHHHHhhhHHHHHHHHHHHHHhccccccc-CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH
Confidence            56788999999999999999999987777    7 8999999999999999999999999999999988 6788999999


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +||+.++|+++.   ++.+.+.+. .++|+|+|++|++. ..++.++++++++|+++.+|
T Consensus       226 lGa~~v~~~~~~---~~~~~~~~~-~g~D~vid~~g~~~-~~~~~~~~~l~~~G~iv~~g  280 (375)
T 2vn8_A          226 LGADDVIDYKSG---SVEEQLKSL-KPFDFILDNVGGST-ETWAPDFLKKWSGATYVTLV  280 (375)
T ss_dssp             TTCSEEEETTSS---CHHHHHHTS-CCBSEEEESSCTTH-HHHGGGGBCSSSCCEEEESC
T ss_pred             cCCCEEEECCch---HHHHHHhhc-CCCCEEEECCCChh-hhhHHHHHhhcCCcEEEEeC
Confidence            999999998874   566677654 47999999999983 12588899999999999987

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=99.75  E-value=4.7e-18  Score=179.76  Aligned_cols=129  Identities=15%  Similarity=0.064  Sum_probs=116.8

Q ss_pred             CCCCCCHHh--HhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589         78 LLSSRDFLA--GLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG  155 (655)
Q Consensus        78 l~~~~s~~e--AAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG  155 (655)
                      +++++++++  ||+++++++|||+++.+.+++ ++|++|+|+||+|++|++++|+|+.+|++|+++++++++++.++++|
T Consensus       112 iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g  190 (333)
T 1wly_A          112 VPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKV-KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG  190 (333)
T ss_dssp             CCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCC-CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT
T ss_pred             CCCCCChHHhCccchhhhHHHHHHHHHHhhCC-CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC
Confidence            456788999  999999999999999877888 89999999999999999999999999999999999999999999999


Q ss_pred             CcEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        156 ADYVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       156 Ad~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++.++|+++.   ++.+.+.+.+  .++|+++|++|+..   ++.++++++++|+++.+|
T Consensus       191 ~~~~~d~~~~---~~~~~i~~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~iv~~g  244 (333)
T 1wly_A          191 CHHTINYSTQ---DFAEVVREITGGKGVDVVYDSIGKDT---LQKSLDCLRPRGMCAAYG  244 (333)
T ss_dssp             CSEEEETTTS---CHHHHHHHHHTTCCEEEEEECSCTTT---HHHHHHTEEEEEEEEECC
T ss_pred             CCEEEECCCH---HHHHHHHHHhCCCCCeEEEECCcHHH---HHHHHHhhccCCEEEEEe
Confidence            9999998764   5666666553  37999999999988   899999999999999987

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=99.75  E-value=2.6e-18  Score=179.23  Aligned_cols=123  Identities=22%  Similarity=0.184  Sum_probs=111.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.+.+ + ++|++|+|+|++|++|++++|+||++|++|+++++++++++.++++|++
T Consensus        95 iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~-~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~  172 (302)
T 1iz0_A           95 LPEGLSPEEAAAFPVSFLTAYLALKRAQ-A-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE  172 (302)
T ss_dssp             CCTTCCHHHHHTSHHHHHHHHHHHHHTT-C-CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS
T ss_pred             CCCCCCHHHHHHhhhHHHHHHHHHHHhc-C-CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC
Confidence            5678899999999999999999998777 7 8999999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCc-cchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTI-RELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~-~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|+++ .   ++.+.+    +++|+|+| +|++.   ++.++++++++|+++.+|
T Consensus       173 ~~~~~~~~~---~~~~~~----~~~d~vid-~g~~~---~~~~~~~l~~~G~~v~~g  218 (302)
T 1iz0_A          173 EAATYAEVP---ERAKAW----GGLDLVLE-VRGKE---VEESLGLLAHGGRLVYIG  218 (302)
T ss_dssp             EEEEGGGHH---HHHHHT----TSEEEEEE-CSCTT---HHHHHTTEEEEEEEEEC-
T ss_pred             EEEECCcch---hHHHHh----cCceEEEE-CCHHH---HHHHHHhhccCCEEEEEe
Confidence            9999865 3   455444    47999999 99988   899999999999999987

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=99.75  E-value=7.8e-18  Score=180.57  Aligned_cols=122  Identities=16%  Similarity=0.083  Sum_probs=111.5

Q ss_pred             HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCc
Q psy14589         85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTI  164 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~  164 (655)
                      .++|+++++++|||+++.+.+++ ++|++|+|+||+|+||++++|+||++|++|+++++++++++.++++|++.++|+.+
T Consensus       139 ~~aaal~~~~~ta~~al~~~~~~-~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~  217 (362)
T 2c0c_A          139 PEYLTLLVSGTTAYISLKELGGL-SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKT  217 (362)
T ss_dssp             HHHHTTTTHHHHHHHHHHHHTCC-CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTT
T ss_pred             hHhhcccchHHHHHHHHHHhcCC-CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCC
Confidence            57889999999999999887888 89999999999999999999999999999999999999999999999999999876


Q ss_pred             cchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        165 RELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       165 ~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .   ++.+.+++.++ ++|+|+|++|+..   ++.++++++++|+++.+|
T Consensus       218 ~---~~~~~~~~~~~~g~D~vid~~g~~~---~~~~~~~l~~~G~iv~~g  261 (362)
T 2c0c_A          218 E---PVGTVLKQEYPEGVDVVYESVGGAM---FDLAVDALATKGRLIVIG  261 (362)
T ss_dssp             S---CHHHHHHHHCTTCEEEEEECSCTHH---HHHHHHHEEEEEEEEECC
T ss_pred             h---hHHHHHHHhcCCCCCEEEECCCHHH---HHHHHHHHhcCCEEEEEe
Confidence            4   56677766554 8999999999877   899999999999999988

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=99.74  E-value=6.7e-18  Score=178.99  Aligned_cols=170  Identities=15%  Similarity=0.005  Sum_probs=126.8

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+....+.|..|..|..++|.+..+-.....         .....|.++|..   .+++++++++||+++ +..++++++
T Consensus        84 ~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~---------G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~~  153 (346)
T 4a2c_A           84 VPLLPCFTCPECLKGFYSQCAKYDFIGSRRD---------GGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHAF  153 (346)
T ss_dssp             CCEECCSCSHHHHTTCGGGCSSCEEBTTTBC---------CSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHHHH
T ss_pred             eeccCCCCcccccCCccccCCCcccccCCCC---------cccccccccchheEEECCCCCCHHHHHhch-HHHHHHHHH
Confidence            3445677899999998777765433110000         111223344432   356788888887654 444555554


Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC--
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG--  178 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~--  178 (655)
                       +...+ ++|++|+|+|+ |++|++++|+||++|++ |++++++++|++.++++||++++|+++.   +..+.+++.+  
T Consensus       154 -~~~~~-~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~---~~~~~~~~~~~~  227 (346)
T 4a2c_A          154 -HLAQG-CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEM---SAPQMQSVLREL  227 (346)
T ss_dssp             -HHTTC-CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTS---CHHHHHHHHGGG
T ss_pred             -HHhcc-CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCC---CHHHHHHhhccc
Confidence             55666 89999999998 99999999999999995 5788889999999999999999999875   4555555543  


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+|+|++|++ +   ++.++++++++|+++++|
T Consensus       228 ~g~d~v~d~~G~~~~---~~~~~~~l~~~G~~v~~g  260 (346)
T 4a2c_A          228 RFNQLILETAGVPQT---VELAVEIAGPHAQLALVG  260 (346)
T ss_dssp             CSSEEEEECSCSHHH---HHHHHHHCCTTCEEEECC
T ss_pred             CCcccccccccccch---hhhhhheecCCeEEEEEe
Confidence            3899999999977 6   899999999999999987

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=99.74  E-value=2.4e-18  Score=180.55  Aligned_cols=118  Identities=14%  Similarity=0.031  Sum_probs=100.7

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++ +.+++ ++|++|||+|+ |+||++++|+||++|++|++++ +++|++.++++||+
T Consensus       112 iP~~~~~~~aa~l~~~~~ta~~al-~~~~~-~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~  187 (315)
T 3goh_A          112 LPDNLSFERAAALPCPLLTAWQAF-EKIPL-TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVR  187 (315)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHH-TTSCC-CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEE
T ss_pred             CcCCCCHHHHhhCccHHHHHHHHH-hhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCC
Confidence            457889999999999999999999 78888 99999999999 9999999999999999999999 89999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|.  .      +.+   ++++|+|+||+|++.   ...++++++++|+++.++
T Consensus       188 ~v~~d--~------~~v---~~g~Dvv~d~~g~~~---~~~~~~~l~~~G~~v~~g  229 (315)
T 3goh_A          188 HLYRE--P------SQV---TQKYFAIFDAVNSQN---AAALVPSLKANGHIICIQ  229 (315)
T ss_dssp             EEESS--G------GGC---CSCEEEEECC----------TTGGGEEEEEEEEEEC
T ss_pred             EEEcC--H------HHh---CCCccEEEECCCchh---HHHHHHHhcCCCEEEEEe
Confidence            99951  1      112   558999999999987   788999999999999986

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=99.74  E-value=2.7e-18  Score=183.55  Aligned_cols=128  Identities=16%  Similarity=0.088  Sum_probs=108.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHHHHh
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAKAYG  153 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~a~~  153 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|||+||+|+||++++|+||++|++|+++++++    ++++.+++
T Consensus       136 iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~-~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~  214 (357)
T 1zsy_A          136 VPSDIPLQSAATLGVNPCTAYRMLMDFEQL-QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKS  214 (357)
T ss_dssp             ECSSSCHHHHHHTTSHHHHHHHHHHHSSCC-CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHH
T ss_pred             CCCCCCHHHHhhhcccHHHHHHHHHHHhcc-CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHh
Confidence            457889999999999999999999888888 9999999999999999999999999999988887653    35678899


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCC---CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGS---ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~---gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +||++++|+.+.    ..+.+.+.++   ++|+|+|++|++.   ...++++++++|+++.+|
T Consensus       215 lGa~~vi~~~~~----~~~~~~~~~~~~~~~Dvvid~~g~~~---~~~~~~~l~~~G~iv~~G  270 (357)
T 1zsy_A          215 LGAEHVITEEEL----RRPEMKNFFKDMPQPRLALNCVGGKS---STELLRQLARGGTMVTYG  270 (357)
T ss_dssp             TTCSEEEEHHHH----HSGGGGGTTSSSCCCSEEEESSCHHH---HHHHHTTSCTTCEEEECC
T ss_pred             cCCcEEEecCcc----hHHHHHHHHhCCCCceEEEECCCcHH---HHHHHHhhCCCCEEEEEe
Confidence            999999986531    1223334332   5999999999887   678999999999999987

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=99.74  E-value=2.5e-17  Score=174.05  Aligned_cols=125  Identities=12%  Similarity=0.005  Sum_probs=112.8

Q ss_pred             CCHHh-HhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE
Q psy14589         82 RDFLA-GLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV  160 (655)
Q Consensus        82 ~s~~e-AAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI  160 (655)
                      +++++ +|+++++++|||+++.+.+++ ++|++|+|+|++|++|++++|+++..|++|+++++++++++.++++|++.++
T Consensus       117 ~~~~~a~a~l~~~~~ta~~al~~~~~~-~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~  195 (333)
T 1v3u_A          117 LPLSLALGTIGMPGLTAYFGLLEVCGV-KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAF  195 (333)
T ss_dssp             SCGGGGGTTTSHHHHHHHHHHHTTSCC-CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE
T ss_pred             CCHHHHHHHhCChHHHHHHHHHHhhCC-CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEE
Confidence            67777 589999999999999888888 8999999999999999999999999999999999999999999999999999


Q ss_pred             eCCc-cchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        161 DHTI-RELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       161 d~~~-~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+++ .   ++.+.+.+.+ +++|+++|++|++.   ++.++++++++|+++.+|
T Consensus       196 d~~~~~---~~~~~~~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~~v~~g  244 (333)
T 1v3u_A          196 NYKTVN---SLEEALKKASPDGYDCYFDNVGGEF---LNTVLSQMKDFGKIAICG  244 (333)
T ss_dssp             ETTSCS---CHHHHHHHHCTTCEEEEEESSCHHH---HHHHHTTEEEEEEEEECC
T ss_pred             ecCCHH---HHHHHHHHHhCCCCeEEEECCChHH---HHHHHHHHhcCCEEEEEe
Confidence            9876 3   5666666654 37999999999887   899999999999999987

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=99.74  E-value=2.8e-17  Score=175.44  Aligned_cols=121  Identities=17%  Similarity=0.095  Sum_probs=109.7

Q ss_pred             hHhhhhhHHHHHHHHhhcCCCCCCCC--CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCcEEEe
Q psy14589         86 AGLAFRVFHSTQYIRHPSKPLYTPEP--DTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGADYVVD  161 (655)
Q Consensus        86 eAAal~~a~~TA~~aL~~~~~l~~~G--d~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd~vId  161 (655)
                      ++|+++++++|||+++.+.+++ ++|  ++|+|+|++|+||++++|+|+++|+ +|+++++++++++.+++ +|++.++|
T Consensus       135 ~~a~l~~~~~ta~~al~~~~~~-~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d  213 (357)
T 2zb4_A          135 FLGAIGMPGLTSLIGIQEKGHI-TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAIN  213 (357)
T ss_dssp             GGTTTSHHHHHHHHHHHHHSCC-CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEE
T ss_pred             HHHhcccHHHHHHHHHHHhcCC-CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEe
Confidence            4789999999999999777788 899  9999999999999999999999999 99999999999998886 99999999


Q ss_pred             CCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++.   ++.+.+.+.++ ++|+++|++|+..   ++.++++++++||++.+|
T Consensus       214 ~~~~---~~~~~~~~~~~~~~d~vi~~~G~~~---~~~~~~~l~~~G~iv~~G  260 (357)
T 2zb4_A          214 YKKD---NVAEQLRESCPAGVDVYFDNVGGNI---SDTVISQMNENSHIILCG  260 (357)
T ss_dssp             TTTS---CHHHHHHHHCTTCEEEEEESCCHHH---HHHHHHTEEEEEEEEECC
T ss_pred             cCch---HHHHHHHHhcCCCCCEEEECCCHHH---HHHHHHHhccCcEEEEEC
Confidence            8864   56777776654 7999999999877   899999999999999988

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=99.73  E-value=1.1e-17  Score=176.53  Aligned_cols=128  Identities=16%  Similarity=0.063  Sum_probs=108.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhh--cCCCCCCCCC-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHP--SKPLYTPEPD-TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~--~~~~l~~~Gd-~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L  154 (655)
                      +++++++++||++++++.|||.++.  +..++ ++|+ +|+|+|++|+||++++|+||++|++|++++++++|++.++++
T Consensus       115 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~-~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l  193 (328)
T 1xa0_A          115 LPKGLTLKEAMAIGTAGFTAALSIHRLEEHGL-TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL  193 (328)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTC-CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCC-CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            5678899999999999999998764  33567 7887 999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        155 GADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ||++++|+++.   + .+.+++.++ ++|+|+|++|++.   ++.++++++++|+++.+|
T Consensus       194 Ga~~~i~~~~~---~-~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~l~~~G~~v~~G  246 (328)
T 1xa0_A          194 GAKEVLAREDV---M-AERIRPLDKQRWAAAVDPVGGRT---LATVLSRMRYGGAVAVSG  246 (328)
T ss_dssp             TCSEEEECC-------------CCSCCEEEEEECSTTTT---HHHHHHTEEEEEEEEECS
T ss_pred             CCcEEEecCCc---H-HHHHHHhcCCcccEEEECCcHHH---HHHHHHhhccCCEEEEEe
Confidence            99999998753   2 333444443 8999999999988   899999999999999987

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=99.72  E-value=4.7e-18  Score=178.73  Aligned_cols=126  Identities=15%  Similarity=0.043  Sum_probs=108.9

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhh--cCCCCCCCCC-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHP--SKPLYTPEPD-TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~--~~~~l~~~Gd-~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L  154 (655)
                      +++++++++||+++++++|||+++.  ...++ ++++ +|+|+|++|+||++++|+||++|++|++++++++|++.++++
T Consensus       112 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~-~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l  190 (324)
T 3nx4_A          112 LPAGLSSRNAMIIGTAGFTAMLCVMALEDAGI-RPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL  190 (324)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTC-CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred             CCCCCCHHHHHHhhhHHHHHHHHHHHhhhccc-CCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence            5678999999999999999998875  33445 5533 499999999999999999999999999999999999999999


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |||+++|+++.   +.   +++.+ +++|+|+|++|++.   ++.++++++++|+++.+|
T Consensus       191 Ga~~vi~~~~~---~~---~~~~~~~~~d~v~d~~g~~~---~~~~~~~l~~~G~iv~~G  241 (324)
T 3nx4_A          191 GANRILSRDEF---AE---SRPLEKQLWAGAIDTVGDKV---LAKVLAQMNYGGCVAACG  241 (324)
T ss_dssp             TCSEEEEGGGS---SC---CCSSCCCCEEEEEESSCHHH---HHHHHHTEEEEEEEEECC
T ss_pred             CCCEEEecCCH---HH---HHhhcCCCccEEEECCCcHH---HHHHHHHHhcCCEEEEEe
Confidence            99999998763   22   33443 38999999999887   999999999999999997

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=99.72  E-value=3.9e-18  Score=182.95  Aligned_cols=169  Identities=11%  Similarity=-0.008  Sum_probs=126.5

Q ss_pred             cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhh
Q psy14589         26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHP  102 (655)
Q Consensus        26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~  102 (655)
                      +....+.|.+|..|..++|.+...-.   .+..   ........|.+++..   .++++++ ++ |+++++++|||+++.
T Consensus        89 ~~~~cg~C~~C~~g~~~~C~~~~~~~---~g~~---~~~G~~aey~~v~~~~~~~iP~~l~-~~-Aal~~~~~ta~~al~  160 (366)
T 2cdc_A           89 NRRGCGICRNCLVGRPDFCETGEFGE---AGIH---KMDGFMREWWYDDPKYLVKIPKSIE-DI-GILAQPLADIEKSIE  160 (366)
T ss_dssp             SEECCSSSHHHHTTCGGGCSSSCCEE---ETTB---EECCSCBSEEEECGGGEEEECGGGT-TT-GGGHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhhCcCcccCCCCCccc---CCcc---CCCCceeEEEEechHHeEECcCCcc-hh-hhhcCcHHHHHHHHH
Confidence            45678899999999988887654310   0000   000111223333332   2345677 54 578999999999997


Q ss_pred             --c--CCCCCC--C-------CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh---HHHHHHHhCCCcEEEeCCccc
Q psy14589        103 --S--KPLYTP--E-------PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP---VGVAKAYGLGADYVVDHTIRE  166 (655)
Q Consensus       103 --~--~~~l~~--~-------Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~---~k~~~a~~LGAd~vId~~~~~  166 (655)
                        +  .+++ +  +       |++|+|+|+ |+||++++|+||++|++|+++++++   ++++.++++||+.+ | ++  
T Consensus       161 ~~~~~~~~~-~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~--  234 (366)
T 2cdc_A          161 EILEVQKRV-PVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY-N-SS--  234 (366)
T ss_dssp             HHHHHGGGS-SCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE-E-CT--
T ss_pred             hhhhcccCc-cccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee-c-hH--
Confidence              4  6677 7  7       999999999 9999999999999999999999998   89999999999998 8 54  


Q ss_pred             hhHHHHHHHhcCCCeeEEEeCCCcc-hHHHH-HHHHHHhccccceEEEe
Q psy14589        167 LDRFANQILSYGSELDADHPGFTDP-VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       167 ~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                        ++.+.+.+..+++|+|+|++|+. .   + +.++++++++|+++.+|
T Consensus       235 --~~~~~~~~~~~~~d~vid~~g~~~~---~~~~~~~~l~~~G~iv~~g  278 (366)
T 2cdc_A          235 --NGYDKLKDSVGKFDVIIDATGADVN---ILGNVIPLLGRNGVLGLFG  278 (366)
T ss_dssp             --TCSHHHHHHHCCEEEEEECCCCCTH---HHHHHGGGEEEEEEEEECS
T ss_pred             --HHHHHHHHhCCCCCEEEECCCChHH---HHHHHHHHHhcCCEEEEEe
Confidence              23333433114899999999997 6   7 89999999999999987

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=99.71  E-value=1.1e-17  Score=178.04  Aligned_cols=128  Identities=14%  Similarity=0.081  Sum_probs=111.5

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD  157 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd  157 (655)
                      +++++++++||+++++++|||+++.... . +.+++|+|+||+|+||++++|+||++|++|++++++++|++.++++|++
T Consensus       134 iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~-~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~  211 (349)
T 3pi7_A          134 LLDTVRDEDGAAMIVNPLTAIAMFDIVK-Q-EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAA  211 (349)
T ss_dssp             CCTTCCC--GGGSSHHHHHHHHHHHHHH-H-HCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCS
T ss_pred             CCCCCCHHHHhhccccHHHHHHHHHHHh-h-CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC
Confidence            5678899999999999999997665433 3 3448999999999999999999999999999999999999999999999


Q ss_pred             EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .++|+++.   ++.+.+++.++  ++|+|+||+|++.   ++.++++++++|+++.+|
T Consensus       212 ~~~~~~~~---~~~~~v~~~~~~~g~D~vid~~g~~~---~~~~~~~l~~~G~iv~~G  263 (349)
T 3pi7_A          212 HVLNEKAP---DFEATLREVMKAEQPRIFLDAVTGPL---ASAIFNAMPKRARWIIYG  263 (349)
T ss_dssp             EEEETTST---THHHHHHHHHHHHCCCEEEESSCHHH---HHHHHHHSCTTCEEEECC
T ss_pred             EEEECCcH---HHHHHHHHHhcCCCCcEEEECCCChh---HHHHHhhhcCCCEEEEEe
Confidence            99999875   67777877653  7999999999988   789999999999999987

>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}

Probab=99.70  E-value=1.1e-17  Score=176.84  Aligned_cols=124  Identities=18%  Similarity=0.217  Sum_probs=102.8

Q ss_pred             hhheeecccccccc-----CCCCCCCCeEEEEEEccC-CCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEec
Q psy14589        239 FFYFLLLSQPLIQS-----CHSCPFSLFDFVIFSNHQ-DEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECA  312 (655)
Q Consensus       239 ~~~F~ll~~p~~~~-----~~~~~~~~ktsl~f~l~~-d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~e  312 (655)
                      +|+|+++++.....     .......+|+|+++.+++ |+||+|+++|+.|+.+|||||+|||||++.+.|+|.||||++
T Consensus       179 ~TRFlvl~~~~~~~~~~~~~~~~~~~~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e  258 (329)
T 3luy_A          179 ATDFLVLSPRAEVARLLAKPRAEANVEYESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLD  258 (329)
T ss_dssp             EEEEEEEECHHHHHHHTHHHHHTTCCCEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEES
T ss_pred             eeEEEEEeccccccccccCCCCCCCCCceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEEe
Confidence            57888998754210     000112357888777764 489999999999999999999999999999999999999999


Q ss_pred             C---CchHHHHHHHHHccCCcEEEecCCCCCCCCCcCcccccchhhhhhhhhhhcCCCCCCCC
Q psy14589        313 P---GGDLSSVIESLRSSCSYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADH  372 (655)
Q Consensus       313 g---~~~v~~~l~~L~~~~~~v~iLGs~~~~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dh  372 (655)
                      |   ++.++++|++|++.|..+|+||+          ||+.........+.++..|.++..|.
T Consensus       259 g~~~d~~v~~AL~~L~~~~~~~kiLGs----------Yp~~~~~~~~~~~~~~~~g~~~~~~~  311 (329)
T 3luy_A          259 AAPWEERFRDALVEIAEHGDWAKTLAV----------YPRREHPNPPVTSWMLPQGGVRLDDS  311 (329)
T ss_dssp             SCTTSHHHHHHHHHHHHTTCEEEEEEE----------EECCCCCCCCGGGCCCCSSCCCCCTT
T ss_pred             CCcCCHHHHHHHHHHHHhCCeEEEEee----------ccCCCcCCCCccceeccCCcccccCC
Confidence            9   78999999999999999999999          88887777788888999998886543

>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}

Probab=99.70  E-value=1.2e-17  Score=173.42  Aligned_cols=97  Identities=20%  Similarity=0.320  Sum_probs=83.8

Q ss_pred             hhheeecccccccc---CCCCCC--CCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC
Q psy14589        239 FFYFLLLSQPLIQS---CHSCPF--SLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP  313 (655)
Q Consensus       239 ~~~F~ll~~p~~~~---~~~~~~--~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg  313 (655)
                      +|+|+++++.....   ......  .+|||++|+++| +||+|+++|+.|+.+|||||+|||||+++..|+|.||||++|
T Consensus       173 ~TRF~vl~~~~~~~~~~~~~~~~~~~~ktsl~f~~~~-~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg  251 (283)
T 2qmx_A          173 ITRFFCIAHENNPDISHLKVRPDVARQKTSIVFALPN-EQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIG  251 (283)
T ss_dssp             EEEEEEEEETTCCCCTTSSSCCEEEEEEEEEEEEEEC-CTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEES
T ss_pred             eeeEEEEecCccccccccccCCCCCCceEEEEEEcCC-CCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEec
Confidence            57889998753210   000011  359999999997 999999999999999999999999999999999999999999


Q ss_pred             ---CchHHHHHHHHHccCCcEEEecC
Q psy14589        314 ---GGDLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       314 ---~~~v~~~l~~L~~~~~~v~iLGs  336 (655)
                         +++++++|++|++.+..+|+||+
T Consensus       252 ~~~d~~v~~aL~~L~~~~~~~kiLGs  277 (283)
T 2qmx_A          252 HREDQNVHNALENLREFATMVKVLGS  277 (283)
T ss_dssp             CTTSHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             CCCcHHHHHHHHHHHHhcCeEEEeee
Confidence               78999999999999999999999

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=99.69  E-value=9e-17  Score=170.40  Aligned_cols=125  Identities=13%  Similarity=0.058  Sum_probs=110.1

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV  160 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI  160 (655)
                      ++++ +|+++++++|||+++.+.+++ ++|++|+|+|++|+||++++|+|+++|++|+++++++++++.++ ++|++.++
T Consensus       129 ~~~~-aa~l~~~~~ta~~al~~~~~~-~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~  206 (345)
T 2j3h_A          129 LSYY-TGLLGMPGMTAYAGFYEVCSP-KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAF  206 (345)
T ss_dssp             TTGG-GTTTSHHHHHHHHHHHTTSCC-CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEE
T ss_pred             HHHH-HHhccccHHHHHHHHHHHhCC-CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEE
Confidence            4444 789999999999999888888 89999999999999999999999999999999999999999998 79999999


Q ss_pred             eCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        161 DHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       161 d~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+++.  +++.+.+++.+ +++|+++|++|++.   ++.++++++++|+++.+|
T Consensus       207 d~~~~--~~~~~~~~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~~v~~G  255 (345)
T 2j3h_A          207 NYKEE--SDLTAALKRCFPNGIDIYFENVGGKM---LDAVLVNMNMHGRIAVCG  255 (345)
T ss_dssp             ETTSC--SCSHHHHHHHCTTCEEEEEESSCHHH---HHHHHTTEEEEEEEEECC
T ss_pred             ecCCH--HHHHHHHHHHhCCCCcEEEECCCHHH---HHHHHHHHhcCCEEEEEc
Confidence            98753  14555666554 37999999999877   899999999999999988

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=99.68  E-value=1.2e-17  Score=176.17  Aligned_cols=128  Identities=13%  Similarity=0.088  Sum_probs=109.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhh--cCCCCCCCCC-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHP--SKPLYTPEPD-TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL  154 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~--~~~~l~~~Gd-~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L  154 (655)
                      +++++++++||++++++.|||+++.  +..++ ++|+ +|+|+||+|+||++++|+||++|++|++++++++|++.++++
T Consensus       116 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~-~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l  194 (330)
T 1tt7_A          116 LPQNLSLKEAMVYGTAGFTAALSVHRLEQNGL-SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL  194 (330)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTC-CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH
T ss_pred             CCCCCCHHHHhhccchHHHHHHHHHHHHhcCc-CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence            5678899999999999999998764  33567 7887 999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+++++|+++.   + .+.+++.+ +++|+|+|++|++.   ++.++++++++|+++.+|
T Consensus       195 Ga~~v~~~~~~---~-~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~l~~~G~iv~~G  247 (330)
T 1tt7_A          195 GASEVISREDV---Y-DGTLKALSKQQWQGAVDPVGGKQ---LASLLSKIQYGGSVAVSG  247 (330)
T ss_dssp             TCSEEEEHHHH---C-SSCCCSSCCCCEEEEEESCCTHH---HHHHHTTEEEEEEEEECC
T ss_pred             CCcEEEECCCc---h-HHHHHHhhcCCccEEEECCcHHH---HHHHHHhhcCCCEEEEEe
Confidence            99999986431   1 11122333 37999999999987   899999999999999987

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=99.65  E-value=1.3e-16  Score=172.26  Aligned_cols=127  Identities=11%  Similarity=-0.057  Sum_probs=108.1

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEc-CCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIG-ANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~G-asGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA  156 (655)
                      +++++++++||+++++++|||+++....   ++|++|+|+| |+|+||++++|+||++|++|++++++++|++.++++||
T Consensus       141 iP~~~~~~~aa~l~~~~~ta~~~~~~~~---~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa  217 (379)
T 3iup_A          141 LPEGATPADGASSFVNPLTALGMVETMR---LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGA  217 (379)
T ss_dssp             CCTTCCHHHHTTSSHHHHHHHHHHHHHH---HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTC
T ss_pred             CCCCCCHHHHHhhhhhHHHHHHHHHHhc---cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCC
Confidence            5678899999999999999998875443   5899999996 78999999999999999999999999999999999999


Q ss_pred             cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhc-----cccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLA-----FNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~-----~gGrlv~v~  213 (655)
                      ++++|+++.   ++.+.+++.++  ++|+|+||+|++ .   .+.++++++     ++|+++.+|
T Consensus       218 ~~~~~~~~~---~~~~~v~~~t~~~g~d~v~d~~g~~~~---~~~~~~~l~~~~~r~~G~~~~~G  276 (379)
T 3iup_A          218 VHVCNAASP---TFMQDLTEALVSTGATIAFDATGGGKL---GGQILTCMEAALNKSAREYSRYG  276 (379)
T ss_dssp             SCEEETTST---THHHHHHHHHHHHCCCEEEESCEEESH---HHHHHHHHHHHHHTTCCSCCTTC
T ss_pred             cEEEeCCCh---HHHHHHHHHhcCCCceEEEECCCchhh---HHHHHHhcchhhhccccceeecc
Confidence            999999875   67888877753  799999999987 5   577777775     555554443

>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3

Probab=99.65  E-value=1.8e-16  Score=163.12  Aligned_cols=91  Identities=27%  Similarity=0.346  Sum_probs=83.0

Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEc---cCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSN---HQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--  313 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l---~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--  313 (655)
                      +|+|+++++.. .    .. .+|||++|++   +| +||+|+++|+.|+.+|||||+|||||+++..|+|.||||++-  
T Consensus       170 ~TRF~vl~~~~-~----~~-~~ktsl~f~~~~~~~-~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e~~~  242 (267)
T 2qmw_A          170 VTRFLVIKNQQ-Q----FD-QNATSLMFLITPMHD-KPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAI  242 (267)
T ss_dssp             EEEEEEEESCC-C----CC-SSCSEEEEEEEESSC-CTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEESCCS
T ss_pred             ceEEEEEecCC-C----CC-CCeEEEEEEcCCCCC-CcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEecCC
Confidence            57899998753 1    12 5799999999   66 999999999999999999999999999999999999999996  


Q ss_pred             CchHHHHHHHHHccCCcEEEecC
Q psy14589        314 GGDLSSVIESLRSSCSYINIISR  336 (655)
Q Consensus       314 ~~~v~~~l~~L~~~~~~v~iLGs  336 (655)
                      ++.++++|++|++.+..+|+||+
T Consensus       243 d~~v~~aL~~L~~~~~~~kiLGs  265 (267)
T 2qmw_A          243 TTDIKKVIAILETLDFKVEMIGA  265 (267)
T ss_dssp             CHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             cHHHHHHHHHHHHhcCeEEEEee
Confidence            78899999999999999999999

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.60  E-value=1.8e-15  Score=195.79  Aligned_cols=130  Identities=16%  Similarity=0.152  Sum_probs=119.8

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----  153 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----  153 (655)
                      +++++++++||+++++++|||+++.+.+++ ++|++|||+||+||||++++|+||++|++|++++++++|++.+++    
T Consensus      1636 iPd~ls~~eAA~lp~~~~TA~~al~~~a~l-~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~ 1714 (2512)
T 2vz8_A         1636 VPSTWTLEEAASVPIVYTTAYYSLVVRGRM-QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQ 1714 (2512)
T ss_dssp             CCTTSCHHHHTTSHHHHHHHHHHHTTTTCC-CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT
T ss_pred             eCCCCCHHHHHHhHHHHHHHHHHHHHHhcC-CCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCC
Confidence            567899999999999999999999888898 999999999999999999999999999999999999999999885    


Q ss_pred             CCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEee
Q psy14589        154 LGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFF  214 (655)
Q Consensus       154 LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~  214 (655)
                      +|+++++|+++.   ++.+.+++.++  |+|+|+|++|++.   ++.++++++++||+|.+|.
T Consensus      1715 lga~~v~~~~~~---~~~~~i~~~t~g~GvDvVld~~g~~~---l~~~l~~L~~~Gr~V~iG~ 1771 (2512)
T 2vz8_A         1715 LDETCFANSRDT---SFEQHVLRHTAGKGVDLVLNSLAEEK---LQASVRCLAQHGRFLEIGK 1771 (2512)
T ss_dssp             CCSTTEEESSSS---HHHHHHHHTTTSCCEEEEEECCCHHH---HHHHHTTEEEEEEEEECCC
T ss_pred             CCceEEecCCCH---HHHHHHHHhcCCCCceEEEECCCchH---HHHHHHhcCCCcEEEEeec
Confidence            899999998875   78888888754  7999999999777   9999999999999999983

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.43  E-value=3.2e-07  Score=102.11  Aligned_cols=105  Identities=13%  Similarity=-0.022  Sum_probs=84.1

Q ss_pred             hhHHHHHHHHhhcCCC-CCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589         91 RVFHSTQYIRHPSKPL-YTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDR  169 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~-l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d  169 (655)
                      .....++|+++.+..+ . .+|++|+|.|+ |+||..++|.+|.+|++|+++++++++.+.++++|++ +++        
T Consensus       254 ~~~~~s~~~g~~r~~~~~-l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~--------  322 (494)
T 3ce6_A          254 YGTRHSLIDGINRGTDAL-IGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVT--------  322 (494)
T ss_dssp             HHHHHHHHHHHHHHHCCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC--------
T ss_pred             hhhhhhhhHHHHhccCCC-CCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Eec--------
Confidence            4455677777654332 3 58999999998 9999999999999999999999999998889999996 322        


Q ss_pred             HHHHHHhcCCCeeEEEeCCCcc-hHHHHH-HHHHHhccccceEEEe
Q psy14589        170 FANQILSYGSELDADHPGFTDP-VYRARR-KYFADLAFNYKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~~~gvDvV~D~vG~~-~~~~l~-~~l~~l~~gGrlv~v~  213 (655)
                      +.+.+    .++|+|++++|.. .   +. +.++.++++|+++.+|
T Consensus       323 l~e~l----~~aDvVi~atgt~~~---i~~~~l~~mk~ggilvnvG  361 (494)
T 3ce6_A          323 VEEAI----GDADIVVTATGNKDI---IMLEHIKAMKDHAILGNIG  361 (494)
T ss_dssp             HHHHG----GGCSEEEECSSSSCS---BCHHHHHHSCTTCEEEECS
T ss_pred             HHHHH----hCCCEEEECCCCHHH---HHHHHHHhcCCCcEEEEeC
Confidence            22222    2689999999987 3   44 7899999999999987

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.41  E-value=2.9e-07  Score=98.65  Aligned_cols=96  Identities=11%  Similarity=-0.016  Sum_probs=75.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE--EEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY--VVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~--vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ++++|+|+|+ |++|++++++++.+|++|++++++++|++.++++|++.  +++....   ++.+.+.    ++|+|++|
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~DvVI~~  237 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA---EIETAVA----EADLLIGA  237 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH---HHHHHHH----TCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHH---HHHHHHc----CCCEEEEC
Confidence            4599999999 99999999999999999999999999999998877654  4554432   4555454    68999999


Q ss_pred             CCcchH---H-HHHHHHHHhccccceEEEe
Q psy14589        188 FTDPVY---R-ARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       188 vG~~~~---~-~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|.+..   . ..+..++.++++|+++.++
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~  267 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTGSVIVDVA  267 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred             CCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence            976420   0 0356788999999988875

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.33  E-value=2.1e-06  Score=92.14  Aligned_cols=97  Identities=11%  Similarity=0.050  Sum_probs=74.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|++|+|+|+ |+||+.+++.++.+|++|+++++++++++.+++ +|++...+..+.  +++.+.+.    ++|+|++++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~--~~l~~~~~----~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATE--ANIKKSVQ----HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCH--HHHHHHHH----HCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCH--HHHHHHHh----CCCEEEECC
Confidence            5799999999 999999999999999999999999998888765 888754444332  24444443    589999999


Q ss_pred             CcchHH----HHHHHHHHhccccceEEEe
Q psy14589        189 TDPVYR----ARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~~~~----~l~~~l~~l~~gGrlv~v~  213 (655)
                      |.+...    ..+..++.++++|++|.++
T Consensus       238 g~~~~~~~~li~~~~l~~mk~gg~iV~v~  266 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEGAVIVDVA  266 (369)
T ss_dssp             C-------CCSCHHHHTTSCTTCEEEECC
T ss_pred             CCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence            854200    0367788999999988876

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.32  E-value=2e-06  Score=92.72  Aligned_cols=97  Identities=13%  Similarity=0.046  Sum_probs=74.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      +|++|+|.|+ |+||+.+++.++.+|++|+++++++++++.+++ +|++..++....  +++.+.+.    ++|+|++|+
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~--~~l~~~l~----~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA--YELEGAVK----RADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH--HHHHHHHH----HCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH--HHHHHHHc----CCCEEEECC
Confidence            6899999999 999999999999999999999999999888876 788743333221  24444443    589999998


Q ss_pred             CcchH---HH-HHHHHHHhccccceEEEe
Q psy14589        189 TDPVY---RA-RRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~~~---~~-l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+..   .. .+..++.++++|++|.++
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g~~iV~va  268 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPGAVLVDIA  268 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred             CcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence            75420   00 267788999999988875

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.24  E-value=1.2e-06  Score=94.72  Aligned_cols=103  Identities=18%  Similarity=0.187  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCcc-----------c-hhH----HHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIR-----------E-LDR----FAN  172 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~-----------~-~~d----~~~  172 (655)
                      +|++|+|.|+ |++|++++++|+.+|++|+++++++++++.++++|++.+ ++..+.           . .++    ..+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            7999999998 999999999999999999999999999888989999865 333110           0 000    111


Q ss_pred             HHHhcCCCeeEEEeCC---CcchHHH-HHHHHHHhccccceEEEe
Q psy14589        173 QILSYGSELDADHPGF---TDPVYRA-RRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       173 ~i~~~~~gvDvV~D~v---G~~~~~~-l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.+...++|+|++|+   |.+.... .+..++.++++|++|-++
T Consensus       250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva  294 (384)
T 1l7d_A          250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA  294 (384)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence            2333334789999999   5321000 267889999999888765

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.17  E-value=1.9e-06  Score=93.79  Aligned_cols=103  Identities=21%  Similarity=0.223  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCc----------cchhHH----HHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTI----------RELDRF----ANQI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~----------~~~~d~----~~~i  174 (655)
                      +|++|+|+|+ |++|+.++++|+.+|++|+++++++++++.++++|++.+. +...          ...+++    .+.+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            6899999998 9999999999999999999999999999889999997652 2110          000011    1112


Q ss_pred             HhcCCCeeEEEeCC---CcchHHH-HHHHHHHhccccceEEEe
Q psy14589        175 LSYGSELDADHPGF---TDPVYRA-RRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~gvDvV~D~v---G~~~~~~-l~~~l~~l~~gGrlv~v~  213 (655)
                      .+...++|+|++++   |.+.... .+..++.|++||.+|-++
T Consensus       250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva  292 (401)
T 1x13_A          250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA  292 (401)
T ss_dssp             HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred             HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence            22223689999995   3210000 267899999999888865

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.15  E-value=2.2e-06  Score=93.22  Aligned_cols=110  Identities=12%  Similarity=0.031  Sum_probs=78.7

Q ss_pred             hhHHHHHHHHhhcC----CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHH-HHHHhCCCcEEEeCCc
Q psy14589         91 RVFHSTQYIRHPSK----PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGV-AKAYGLGADYVVDHTI  164 (655)
Q Consensus        91 ~~a~~TA~~aL~~~----~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~-~~a~~LGAd~vId~~~  164 (655)
                      ..+..++|+++...    +.+  +|++|+|.|+ |++|.++++.++..|+ +|++++++++|. +.++++|++ ++++. 
T Consensus       145 ~~~~s~a~~av~~a~~~~~~l--~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~-  219 (404)
T 1gpj_A          145 EGAVSIGSAAVELAERELGSL--HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD-  219 (404)
T ss_dssp             CSCCSHHHHHHHHHHHHHSCC--TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG-
T ss_pred             CCCccHHHHHHHHHHHHhccc--cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecHH-
Confidence            34555677665322    134  8999999999 9999999999999999 999999998886 667888986 44432 


Q ss_pred             cchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHH--h--ccccceEEEe
Q psy14589        165 RELDRFANQILSYGSELDADHPGFTDPVYRARRKYFAD--L--AFNYKHFFFF  213 (655)
Q Consensus       165 ~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~--l--~~gGrlv~v~  213 (655)
                          ++.+.+.    ++|+|++++|....-.-...++.  +  +++|++++++
T Consensus       220 ----~l~~~l~----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vd  264 (404)
T 1gpj_A          220 ----ELVDHLA----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIID  264 (404)
T ss_dssp             ----GHHHHHH----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEE
T ss_pred             ----hHHHHhc----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEE
Confidence                3444343    68999999987620001245665  3  5678888887

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.90  E-value=0.00012  Score=63.91  Aligned_cols=89  Identities=11%  Similarity=-0.075  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .+.+|+|.|+ |++|..+++.+...| .+|+++++++++.+.+...|...+. |..+.      +.+.+.-.++|+|+++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~   76 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDE------AGLAKALGGFDAVISA   76 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCH------HHHHHHTTTCSEEEEC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCH------HHHHHHHcCCCEEEEC
Confidence            4678999999 999999999999999 7999999999998888877766543 33321      2232323378999999


Q ss_pred             CCcchHHHHHHHHHHhccccc
Q psy14589        188 FTDPVYRARRKYFADLAFNYK  208 (655)
Q Consensus       188 vG~~~~~~l~~~l~~l~~gGr  208 (655)
                      +|...   .....+.....|.
T Consensus        77 ~~~~~---~~~~~~~~~~~g~   94 (118)
T 3ic5_A           77 APFFL---TPIIAKAAKAAGA   94 (118)
T ss_dssp             SCGGG---HHHHHHHHHHTTC
T ss_pred             CCchh---hHHHHHHHHHhCC
Confidence            98775   3444444444444

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.78  E-value=4.4e-05  Score=82.82  Aligned_cols=100  Identities=19%  Similarity=0.195  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe-------------CCccchhHH----HH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD-------------HTIRELDRF----AN  172 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId-------------~~~~~~~d~----~~  172 (655)
                      ++.+|+|.|+ |.+|+.++++++.+|++|++.++++++++.++++|++.+-.             |.+.-.+++    .+
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            6799999999 99999999999999999999999999999999999864321             111000000    11


Q ss_pred             HHHhcCCCeeEEEeCCCcc-------hHHHHHHHHHHhccccceEEEe
Q psy14589        173 QILSYGSELDADHPGFTDP-------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       173 ~i~~~~~gvDvV~D~vG~~-------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.+.-.+.|+|+.|+..+       .   .+..++.+++|..+|-+.
T Consensus       268 ~l~e~l~~aDVVI~tvlipg~~ap~Lv---t~emv~~Mk~GsVIVDvA  312 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALIPGRPAPRLV---TREMLDSMKPGSVVVDLA  312 (405)
T ss_dssp             HHHHHHHTCSEEEECCCCSSSCCCCCB---CHHHHTTSCTTCEEEETT
T ss_pred             HHHHHhcCCCEEEECCcCCCCCCCEEe---cHHHHhcCCCCCEEEEEe
Confidence            1222222689999996322       3   378899999888777653

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.72  E-value=3.9e-05  Score=82.59  Aligned_cols=100  Identities=13%  Similarity=0.088  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-e--------CCcc-chh---HHHHHHHh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-D--------HTIR-ELD---RFANQILS  176 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d--------~~~~-~~~---d~~~~i~~  176 (655)
                      ++.+|+|.|+ |.+|+.++++++.+|++|++.++++++++.++++|++.+- +        |... ..+   .-.+.+.+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            7899999999 9999999999999999999999999999999999987431 0        1100 000   00112222


Q ss_pred             cCCCeeEEEeCCCcc-------hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPGFTDP-------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~-------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .-.+.|+|+.++..+       .   .+..++.+++|+.+|-+.
T Consensus       262 ~l~~aDIVI~tv~iPg~~ap~Lv---t~emv~~MkpGsVIVDvA  302 (381)
T 3p2y_A          262 AITKFDIVITTALVPGRPAPRLV---TAAAATGMQPGSVVVDLA  302 (381)
T ss_dssp             HHTTCSEEEECCCCTTSCCCCCB---CHHHHHTSCTTCEEEETT
T ss_pred             HHhcCCEEEECCCCCCcccceee---cHHHHhcCCCCcEEEEEe
Confidence            223789999986221       2   378899999988777653

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.70  E-value=5e-05  Score=82.77  Aligned_cols=101  Identities=14%  Similarity=0.021  Sum_probs=75.8

Q ss_pred             HHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHH
Q psy14589         96 TQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQIL  175 (655)
Q Consensus        96 TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~  175 (655)
                      ..++++.+..+..-.|++|+|.|. |.||..+++.+|.+|++|+++++++.+...+...|... .        ++.+.+.
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~--------~Leeal~  274 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-V--------KLNEVIR  274 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-C--------CHHHHTT
T ss_pred             HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-c--------cHHHHHh
Confidence            344555443322148999999999 99999999999999999999999888777777788642 1        2222222


Q ss_pred             hcCCCeeEEEeCCCcc-hHHHH-HHHHHHhccccceEEEe
Q psy14589        176 SYGSELDADHPGFTDP-VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~-~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                          ..|+|+.|.|.. .   + .+.++.+++++.++-++
T Consensus       275 ----~ADIVi~atgt~~l---I~~e~l~~MK~gailINvg  307 (435)
T 3gvp_A          275 ----QVDIVITCTGNKNV---VTREHLDRMKNSCIVCNMG  307 (435)
T ss_dssp             ----TCSEEEECSSCSCS---BCHHHHHHSCTTEEEEECS
T ss_pred             ----cCCEEEECCCCccc---CCHHHHHhcCCCcEEEEec
Confidence                579999998866 3   3 48899999999888876

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.69  E-value=0.00012  Score=68.18  Aligned_cols=96  Identities=8%  Similarity=-0.032  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhc-CCCeeEEEe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSY-GSELDADHP  186 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~-~~gvDvV~D  186 (655)
                      .++++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.++ +.|+..+ .....   + .+.+.+. ..++|+|+.
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~-~~d~~---~-~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTV-VGDAA---E-FETLKECGMEKADMVFA   90 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEE-ESCTT---S-HHHHHTTTGGGCSEEEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEE-EecCC---C-HHHHHHcCcccCCEEEE
Confidence            57899999998 99999999999999999999999998887777 6787643 22211   1 1223332 237899999


Q ss_pred             CCCcchHHHHHHHHHHhcc-ccceEEE
Q psy14589        187 GFTDPVYRARRKYFADLAF-NYKHFFF  212 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~l~~-gGrlv~v  212 (655)
                      +++...  ....+...++. +|...++
T Consensus        91 ~~~~~~--~~~~~~~~~~~~~~~~~iv  115 (155)
T 2g1u_A           91 FTNDDS--TNFFISMNARYMFNVENVI  115 (155)
T ss_dssp             CSSCHH--HHHHHHHHHHHTSCCSEEE
T ss_pred             EeCCcH--HHHHHHHHHHHHCCCCeEE
Confidence            999873  13344444554 4544443

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.65  E-value=7.2e-05  Score=78.03  Aligned_cols=100  Identities=18%  Similarity=0.099  Sum_probs=71.9

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .++ ++|++||..|+ |+.|..++.+|+..|++|++++.+++.++.|++    .|.+.+ .....   |..+ +.  .+.
T Consensus       118 a~l-~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~g---Da~~-l~--d~~  188 (298)
T 3fpf_A          118 GRF-RRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGV-NVITG---DETV-ID--GLE  188 (298)
T ss_dssp             TTC-CTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSE-EEEES---CGGG-GG--GCC
T ss_pred             cCC-CCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCe-EEEEC---chhh-CC--CCC
Confidence            567 89999999999 777778888898889999999999998888764    354322 11111   1111 11  237


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+|+.+...+ ..+.++.+.+.|++||++++..
T Consensus       189 FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~  222 (298)
T 3fpf_A          189 FDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT  222 (298)
T ss_dssp             CSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             cCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence            99998665543 2244889999999999999864

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.61  E-value=0.00051  Score=65.45  Aligned_cols=96  Identities=9%  Similarity=-0.014  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhc--CCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSY--GSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~--~~gvDvV~  185 (655)
                      .+++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.+++.|+..+. |..+.      +.+.+.  ..++|+|+
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~------~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDP------DFWERILDTGHVKLVL  110 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCH------HHHHTBCSCCCCCEEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCH------HHHHhccCCCCCCEEE
Confidence            4778999998 99999999999998 99999999999999999999987654 33321      233444  23799999


Q ss_pred             eCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        186 PGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       186 D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+++.. .+...-..++.+.+.++++..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          111 LAMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             ECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             EeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999876 311122333334444455544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.61  E-value=0.00035  Score=72.32  Aligned_cols=91  Identities=12%  Similarity=0.096  Sum_probs=71.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|++|+|.|+ |++|..+++.++.+|++|++.++++++.+.+.++|+.. ++..     ++.+.+    ...|+|+.+++
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~~-----~l~~~l----~~aDvVi~~~p  222 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHIS-----KAAQEL----RDVDVCINTIP  222 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEGG-----GHHHHT----TTCSEEEECCS
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cChh-----hHHHHh----cCCCEEEECCC
Confidence            8999999998 99999999999999999999999988877777888763 3321     233322    26899999997


Q ss_pred             cchHHHHHHHHHHhccccceEEEe
Q psy14589        190 DPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ....  -+..++.+++++.+|-++
T Consensus       223 ~~~i--~~~~l~~mk~~~~lin~a  244 (293)
T 3d4o_A          223 ALVV--TANVLAEMPSHTFVIDLA  244 (293)
T ss_dssp             SCCB--CHHHHHHSCTTCEEEECS
T ss_pred             hHHh--CHHHHHhcCCCCEEEEec
Confidence            6520  246788899988877764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.58  E-value=0.00032  Score=71.64  Aligned_cols=104  Identities=15%  Similarity=0.120  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HH----HHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VA----KAYGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~----~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++ .+    .+++.|....   .|.++.. ...+.+.+.+..++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68899999999999999998888889999999887643 22    2345565432   2444321 11222333333347


Q ss_pred             eeEEEeCCCcc--------hHH---------------HHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP--------VYR---------------ARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~--------~~~---------------~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++.++|..        ..+               ..+.+++.++.+|++|.++
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  163 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG  163 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence            99999998842        101               1234455555678988876

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.58  E-value=0.00054  Score=68.94  Aligned_cols=80  Identities=23%  Similarity=0.180  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+. +++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCc
Confidence            688999999999999999988888899999999998776554    33454322   2444421 12344455555 689


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        85 d~lv~nAg~   93 (252)
T 3h7a_A           85 EVTIFNVGA   93 (252)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEECCCc
Confidence            999999984

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.56  E-value=0.00014  Score=79.49  Aligned_cols=101  Identities=10%  Similarity=-0.137  Sum_probs=74.9

Q ss_pred             HHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589         97 QYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus        97 A~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      .+.++.+..+..-.|++|+|.|. |.||..+++.++.+|++|+++++++.+...+...|+.. +        ++.+.+. 
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v--------~LeElL~-  301 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-V--------TLDDAAS-  301 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-C--------CHHHHGG-
T ss_pred             HHHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-c--------cHHHHHh-
Confidence            34444433222148999999999 99999999999999999999998887766667778642 2        1222232 


Q ss_pred             cCCCeeEEEeCCCcchHHHH-HHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPGFTDPVYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                         ..|+|+.++|...  .+ .+.++.|++++.++-++
T Consensus       302 ---~ADIVv~atgt~~--lI~~e~l~~MK~GAILINvG  334 (464)
T 3n58_A          302 ---TADIVVTTTGNKD--VITIDHMRKMKDMCIVGNIG  334 (464)
T ss_dssp             ---GCSEEEECCSSSS--SBCHHHHHHSCTTEEEEECS
T ss_pred             ---hCCEEEECCCCcc--ccCHHHHhcCCCCeEEEEcC
Confidence               4799999998762  02 68899999999888876

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.54  E-value=0.00054  Score=71.59  Aligned_cols=81  Identities=17%  Similarity=0.130  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCC--c-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGA--D-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGA--d-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+.    ..|.  . .+  .|.++.. .+.+.+.+.+..+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            6889999999999999998888788999999999988766543    2232  1 12  3544431 1223344444445


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        87 ~id~lv~nAg~   97 (319)
T 3ioy_A           87 PVSILCNNAGV   97 (319)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            89999999983

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.54  E-value=2.1e-05  Score=72.46  Aligned_cols=103  Identities=11%  Similarity=-0.142  Sum_probs=70.7

Q ss_pred             HHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH-HHhCCCcEEEeCCccchhHHHHH
Q psy14589         95 STQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK-AYGLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus        95 ~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-a~~LGAd~vId~~~~~~~d~~~~  173 (655)
                      +++++++......  .|++|+|.|+ |++|...++.++..|++|++.++++++.+. ++++|.+. ....     ++.+.
T Consensus         7 sv~~~a~~~~~~~--~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~-----~~~~~   77 (144)
T 3oj0_A            7 SIPSIVYDIVRKN--GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLIN-----DIDSL   77 (144)
T ss_dssp             SHHHHHHHHHHHH--CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECS-----CHHHH
T ss_pred             cHHHHHHHHHHhc--cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-Eeec-----CHHHH
Confidence            4555555443332  5899999998 999999999888889999999999888765 56777543 3333     23333


Q ss_pred             HHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        174 ILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       174 i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.    ++|+|+.+++...   .....+.+++++.++-++
T Consensus        78 ~~----~~Divi~at~~~~---~~~~~~~l~~g~~vid~~  110 (144)
T 3oj0_A           78 IK----NNDVIITATSSKT---PIVEERSLMPGKLFIDLG  110 (144)
T ss_dssp             HH----TCSEEEECSCCSS---CSBCGGGCCTTCEEEECC
T ss_pred             hc----CCCEEEEeCCCCC---cEeeHHHcCCCCEEEEcc
Confidence            43    5899999999862   111125677766666554

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.51  E-value=0.00035  Score=70.50  Aligned_cols=81  Identities=16%  Similarity=0.121  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. ++|....   .|.++.. .+.+.+.+.+..+++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7899999999999999999888888999999999988876654 3443322   2444321 112333333333589999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        87 v~nAg~   92 (255)
T 4eso_A           87 HINAGV   92 (255)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999875

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.50  E-value=0.00024  Score=73.18  Aligned_cols=81  Identities=25%  Similarity=0.222  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||++|||.+.++.....||+|+++++++++++.+ +++|....   .|.++.. .+.+.+.+.+..+++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            799999999999999999998888999999999999887765 55664322   3444431 123334444444589999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus       108 VNNAG~  113 (273)
T 4fgs_A          108 FVNAGG  113 (273)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.48  E-value=0.00067  Score=66.18  Aligned_cols=95  Identities=5%  Similarity=-0.093  Sum_probs=63.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecChH-HHHHHH--hCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        112 DTLFIIGANRGNGLAAIQVGK-AYGLTVFASVGCPV-GVAKAY--GLGADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk-~~Ga~Viat~~s~~-k~~~a~--~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      ++|+|+||+|++|..+++.+. ..|++|++++++++ +.+.+.  ..++..+ .|..+.  +++.+.+    .++|+|+.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~----~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNP--GXLEQAV----TNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCH--HHHHHHH----TTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCH--HHHHHHH----cCCCEEEE
Confidence            469999999999999988776 79999999999988 766553  2233222 233332  2333333    26899999


Q ss_pred             CCCcchHHHHHHHHHHhccc--cceEEEe
Q psy14589        187 GFTDPVYRARRKYFADLAFN--YKHFFFF  213 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~l~~g--Grlv~v~  213 (655)
                      ++|....+ ....++.++..  |++|.+.
T Consensus        80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iS  107 (221)
T 3r6d_A           80 GAMESGSD-MASIVKALSRXNIRRVIGVS  107 (221)
T ss_dssp             SCCCCHHH-HHHHHHHHHHTTCCEEEEEE
T ss_pred             cCCCCChh-HHHHHHHHHhcCCCeEEEEe
Confidence            99875322 45555655543  5777775

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.47  E-value=0.00073  Score=69.86  Aligned_cols=81  Identities=19%  Similarity=0.142  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+++.+.+.+..+++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            789999999999999999988888899999999998876654    23454322   3444421 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       110 d~lvnnAg~  118 (301)
T 3tjr_A          110 DVVFSNAGI  118 (301)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.47  E-value=0.0008  Score=68.70  Aligned_cols=81  Identities=16%  Similarity=0.104  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE--E--EeCCcc-c-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY--V--VDHTIR-E-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~--v--Id~~~~-~-~~d~~~~i~~~~~  179 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+    ++.+...  +  .|..+. . ...+.+.+.+..+
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            688999999999999999887778899999999998775543    3333221  1  344442 1 1233444444445


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        91 ~iD~lv~nAg~  101 (311)
T 3o26_A           91 KLDILVNNAGV  101 (311)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            89999999984

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.47  E-value=0.0004  Score=69.35  Aligned_cols=77  Identities=16%  Similarity=0.076  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-e--cChHHHHHHH-hC-CCcEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-V--GCPVGVAKAY-GL-GADYVVDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~--~s~~k~~~a~-~L-GAd~vId~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      |++++|+||+||||..+++.....|++|+++ +  +++++.+.+. ++ |.+ +.|..+-  +.+.+.+.+..+++|+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v--~~~~~~~~~~~g~iD~lv   77 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKP--ERLVDATLQHGEAIDTIV   77 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCG--GGHHHHHGGGSSCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHH--HHHHHHHHHHcCCCCEEE
Confidence            4689999999999999998888889999999 6  8887776553 44 543 3344332  345566655555899999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus        78 ~~Ag~   82 (244)
T 1zmo_A           78 SNDYI   82 (244)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.45  E-value=0.00036  Score=70.08  Aligned_cols=99  Identities=9%  Similarity=0.003  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      -|++|+|+||+||||..+++.....|++|+++++++++.+.     ....+|..+.. .+.+.+.+.+..+++|+++.++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            57899999999999999998888889999999998765321     11223433321 1223344444445899999999


Q ss_pred             Cc-------c--hHH---------------HHHHHHHHhccccceEEEe
Q psy14589        189 TD-------P--VYR---------------ARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~-------~--~~~---------------~l~~~l~~l~~gGrlv~v~  213 (655)
                      |.       .  ..+               ..+.+++.++++|++|.++
T Consensus        96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  144 (251)
T 3orf_A           96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTG  144 (251)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEe
Confidence            83       1  111               1233445566778988886

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.44  E-value=0.00073  Score=69.52  Aligned_cols=81  Identities=14%  Similarity=0.093  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HH----HHhCCCcEEE---eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AK----AYGLGADYVV---DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~----a~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++. +.    +++.|....+   |.++.. .+.+.+.+.+..++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999988888899999998876532 22    2345544332   444421 11233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       126 iD~lvnnAg~  135 (291)
T 3ijr_A          126 LNILVNNVAQ  135 (291)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998774

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.43  E-value=0.00045  Score=70.40  Aligned_cols=80  Identities=16%  Similarity=0.177  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+    ++.|....   .|-++.. .+.+.+.+.+.-+++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999888778899999999998877654    45675433   3444431 123334444434589


Q ss_pred             eEEEeCCC
Q psy14589        182 DADHPGFT  189 (655)
Q Consensus       182 DvV~D~vG  189 (655)
                      |++++++|
T Consensus        86 DiLVNNAG   93 (254)
T 4fn4_A           86 DVLCNNAG   93 (254)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.41  E-value=0.00044  Score=70.55  Aligned_cols=82  Identities=20%  Similarity=0.069  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEEE---eCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYVV---DHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+    ++.|.+...   |-+++. .+.+.+.+.+..+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            799999999999999999988888999999999998776553    455654432   333321 123344454545689


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |++++++|..
T Consensus        88 DiLVNNAG~~   97 (255)
T 4g81_D           88 DILINNAGIQ   97 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEECCCCC
Confidence            9999998853

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.40  E-value=0.00049  Score=69.85  Aligned_cols=80  Identities=13%  Similarity=-0.055  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV---VDHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +++|+|+||++|||.+.++.....|++|+.+++++++.+.+.+.+....   .|.++.. .+.+.+.+.+.-+++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3689999999999999998888899999999999988877766554432   2444321 12333344443458999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        82 NAG~   85 (247)
T 3ged_A           82 NACR   85 (247)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.40  E-value=0.00027  Score=69.80  Aligned_cols=76  Identities=16%  Similarity=0.023  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|+|+||+|+||..+++.+...|++|+++++++++.+.+.+.++..++...      +.+.+.+.-+++|+|+.++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~D------l~~~~~~~~~~~D~vi~~ag   93 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVAN------LEEDFSHAFASIDAVVFAAG   93 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECC------TTSCCGGGGTTCSEEEECCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcc------cHHHHHHHHcCCCEEEECCC
Confidence            688999999999999999998888899999999999998888777772333211      11122222237999999998


Q ss_pred             cc
Q psy14589        190 DP  191 (655)
Q Consensus       190 ~~  191 (655)
                      ..
T Consensus        94 ~~   95 (236)
T 3e8x_A           94 SG   95 (236)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.39  E-value=0.001  Score=67.01  Aligned_cols=81  Identities=17%  Similarity=0.155  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+|+|+||+||||..+++.....|++|+++++++++.+.+    .+.|....   .|.++.. ...+.+.+.+..+++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            688999999999999999887778899999999998876554    23454322   2444321 112233333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       108 d~lv~~Ag~  116 (262)
T 3rkr_A          108 DVLVNNAGV  116 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999985

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.38  E-value=0.00087  Score=67.99  Aligned_cols=104  Identities=16%  Similarity=0.151  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHH----HHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAK----AYGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~----a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|++++++ +++.+.    +++.|....   .|.++.. ..++.+.+.+..++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999998888889999887654 343333    344564432   2444321 11233333333347


Q ss_pred             eeEEEeCCCcc--------h---------------HHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP--------V---------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~--------~---------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++.++|..        .               +...+.+++.++++|++|.++
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is  152 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS  152 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence            99999998852        1               112345556677789988876

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.38  E-value=0.00073  Score=68.05  Aligned_cols=81  Identities=9%  Similarity=-0.006  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCC--cEE--EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGA--DYV--VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGA--d~v--Id~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++|+|+||+|  |||..+++.....|++|++++++++..+.+    .+.+.  -.+  .|.++.. .+.+.+.+.+..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            688999999994  599988887777899999998886544433    23443  122  3444431 122334444433


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        86 g~id~li~~Ag~   97 (266)
T 3oig_A           86 GVIHGIAHCIAF   97 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCeeEEEEcccc
Confidence            479999998874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.38  E-value=0.00077  Score=68.02  Aligned_cols=81  Identities=20%  Similarity=0.112  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHH----HHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAK----AYGLGADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~----a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++ .+++++.+.    +++.|... .  .|.++.. .+.+.+.+.+..++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            68899999999999999988877889999888 444444333    23445432 2  3444421 12233334333357


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        87 id~lv~nAg~   96 (259)
T 3edm_A           87 IHGLVHVAGG   96 (259)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999998874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.37  E-value=0.001  Score=67.40  Aligned_cols=81  Identities=20%  Similarity=0.108  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. +++... .  .|.++.. .+.+.+.+.+..+++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            6789999999999999999888888999999999988776653 454221 1  2444421 112223333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            998874

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.37  E-value=0.00015  Score=80.37  Aligned_cols=88  Identities=15%  Similarity=-0.003  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|++|+|+|+ |+||..+++.++..|++|+++++++.+...+...|++ +.+..     +       ....+|+++++.|
T Consensus       264 ~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~le-----e-------~~~~aDvVi~atG  329 (488)
T 3ond_A          264 AGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTLE-----D-------VVSEADIFVTTTG  329 (488)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGG-----G-------TTTTCSEEEECSS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCHH-----H-------HHHhcCEEEeCCC
Confidence            8999999999 7999999999999999999999998888888888864 22111     1       1125899999998


Q ss_pred             cc-hHHHHHHHHHHhccccceEEEe
Q psy14589        190 DP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .. .  .-...++.+++++.++-+|
T Consensus       330 ~~~v--l~~e~l~~mk~gaiVvNaG  352 (488)
T 3ond_A          330 NKDI--IMLDHMKKMKNNAIVCNIG  352 (488)
T ss_dssp             CSCS--BCHHHHTTSCTTEEEEESS
T ss_pred             Chhh--hhHHHHHhcCCCeEEEEcC
Confidence            76 3  0245788999999888776

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.36  E-value=0.0012  Score=67.23  Aligned_cols=104  Identities=16%  Similarity=0.101  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|++++ +++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            688999999999999998887777899998874 444444333    34554332   2444431 11233334343458


Q ss_pred             eeEEEeCCCcc-----------hH------------HHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP-----------VY------------RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~-----------~~------------~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++.++|..           .|            ...+.+++.++.+|++|.+.
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is  161 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS  161 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence            99999999842           01            12334555667788988876

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.36  E-value=0.00088  Score=66.26  Aligned_cols=78  Identities=15%  Similarity=0.047  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE--eCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV--DHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +|++|+|+||+|+||..+++.....|++|+++++++++.+.+. ++....++  |..+.  +++.+.+. ..+++|+++.
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~-~~~~id~vi~   82 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW--EATERALG-SVGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH--HHHHHHHT-TCCCCCEEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH--HHHHHHHH-HcCCCCEEEE
Confidence            6889999999999999999988889999999999988776553 34322333  33332  23333333 2247999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        83 ~Ag~   86 (244)
T 3d3w_A           83 NAAV   86 (244)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9884

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.35  E-value=0.0013  Score=67.08  Aligned_cols=104  Identities=17%  Similarity=0.042  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHH----HHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAK----AYGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~----a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|++++++. ++.+.    +++.|....   .|.++.. .+.+.+.+.+..++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999988778899998885543 44333    234464432   2443321 11223333333347


Q ss_pred             eeEEEeCCCcc--------h---------------HHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP--------V---------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~--------~---------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++.++|..        .               +...+.+++.++.+|++|.++
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is  165 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG  165 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence            99999998842        1               112334455666788988876

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.35  E-value=0.00052  Score=71.19  Aligned_cols=91  Identities=9%  Similarity=0.129  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|++|+|.|+ |++|..+++.++.+|++|++.++++++.+.+.++|+. ++++.     ++.+.+    .+.|+|+.+++
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~~-----~l~~~l----~~aDvVi~~~p  224 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHTD-----ELKEHV----KDIDICINTIP  224 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEGG-----GHHHHS----TTCSEEEECCS
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEchh-----hHHHHh----hCCCEEEECCC
Confidence            8999999998 9999999999999999999999998887777778875 34321     233222    36899999998


Q ss_pred             cchHHHHHHHHHHhccccceEEEe
Q psy14589        190 DPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ....  -+..++.+++++.+|-++
T Consensus       225 ~~~i--~~~~~~~mk~g~~lin~a  246 (300)
T 2rir_A          225 SMIL--NQTVLSSMTPKTLILDLA  246 (300)
T ss_dssp             SCCB--CHHHHTTSCTTCEEEECS
T ss_pred             hhhh--CHHHHHhCCCCCEEEEEe
Confidence            7630  245678899988777764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.35  E-value=0.00083  Score=67.10  Aligned_cols=82  Identities=15%  Similarity=0.053  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      ..|.+|+|+||+|+||..+++.... .|++|++++++.++.+.+    ++.|.. .+  .|..+.. ...+.+.+.+..+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4688999999999999998877666 899999999987765443    233432 22  3444321 1122233333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        82 ~id~li~~Ag~   92 (276)
T 1wma_A           82 GLDVLVNNAGI   92 (276)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.35  E-value=0.0013  Score=66.76  Aligned_cols=81  Identities=17%  Similarity=0.141  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC------------hHHHHHH----HhCCCcEE---EeCCccc-hhH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC------------PVGVAKA----YGLGADYV---VDHTIRE-LDR  169 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s------------~~k~~~a----~~LGAd~v---Id~~~~~-~~d  169 (655)
                      .|++|+|+||+||||..+++.....|++|++++++            .++.+.+    +..|....   .|.++.. ...
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            68999999999999999998888889999999876            4444332    34454322   2444421 112


Q ss_pred             HHHHHHhcCCCeeEEEeCCCc
Q psy14589        170 FANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       170 ~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +.+.+.+..+++|+++.++|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCc
Confidence            233333333479999999885

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.33  E-value=0.0011  Score=66.44  Aligned_cols=79  Identities=20%  Similarity=0.118  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcEE---EeCCccchhHHHHH---HHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADYV---VDHTIRELDRFANQ---ILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~~---i~~~~  178 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++ ++++.+.+    ++.|....   .|..+.  +++.+.   +.+..
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP--SEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH--HHHHHHHHHHHHHc
Confidence            6889999999999999999888888999999988 66655433    34465422   244432  233332   22223


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        98 ~~~d~vi~~Ag~  109 (274)
T 1ja9_A           98 GGLDFVMSNSGM  109 (274)
T ss_dssp             SCEEEEECCCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.33  E-value=0.00049  Score=69.09  Aligned_cols=77  Identities=9%  Similarity=-0.080  Sum_probs=53.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GLGADYV-VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ++++|+||+||||..+++.....|++|+++++++++.+.+.   +.|.+.. +|..+  .+.+.+.+.+..+++|+++.+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~--v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHH--HHHHHHHHHHHhCCCCEEEEC
Confidence            47999999999999999888888999999999877665543   2343322 23322  124444444444579999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        80 Ag~   82 (254)
T 1zmt_A           80 DIF   82 (254)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.32  E-value=0.00087  Score=67.80  Aligned_cols=81  Identities=11%  Similarity=0.036  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH---HHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV---GVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~---k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++++|+||+||||..+++.....|++|++++++..   +.+.+    ++.|....   .|.++.. .+.+.+.+.+..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            7899999999999999998888788999999876532   33322    33454322   2444421 122333343333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        90 g~iD~lvnnAg~  101 (262)
T 3ksu_A           90 GKVDIAINTVGK  101 (262)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            589999999983

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.31  E-value=0.00072  Score=67.56  Aligned_cols=81  Identities=21%  Similarity=0.120  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+ .++|+..+ .|.++.. .+.+.+.+.+..+++|+++.
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999999999999999988888899999999998877655 34564332 3444421 11222333333347999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.29  E-value=0.00086  Score=67.35  Aligned_cols=81  Identities=17%  Similarity=0.043  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----C--C--CcEE--EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----L--G--ADYV--VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----L--G--Ad~v--Id~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.+    .  +  --.+  .|.++.. .+.+.+.+.+..
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            68899999999999999988777789999999999887665532    1  2  1222  3444421 112333333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        86 g~iD~lvnnAg~   97 (250)
T 3nyw_A           86 GAVDILVNAAAM   97 (250)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            589999999985

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.29  E-value=0.0024  Score=65.72  Aligned_cols=81  Identities=12%  Similarity=0.011  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCc--hHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEEE--eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRG--NGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYVV--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGg--VG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~vI--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+|+  ||..+++.....|++|++++++++..+.+.    +.|...++  |.++.. .+.+.+.+.+..++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK  109 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            7899999999955  999998888788999999998865433332    33433332  444421 12334444444458


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       110 iD~lVnnAG~  119 (293)
T 3grk_A          110 LDFLVHAIGF  119 (293)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999884

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.29  E-value=0.00098  Score=70.73  Aligned_cols=85  Identities=16%  Similarity=0.145  Sum_probs=58.0

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-----------HHHHHhCCCcEE---EeCCccc-hh
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-----------VAKAYGLGADYV---VDHTIRE-LD  168 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-----------~~~a~~LGAd~v---Id~~~~~-~~  168 (655)
                      ...+  .|++|+|+||+||||..+++.....|++|+++++++++           .+.+++.|....   .|.++.. .+
T Consensus        40 ~~~l--~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           40 TGRL--AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             CSTT--TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             CCCC--CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence            3455  78999999999999999988887889999999988753           233455564322   2444431 11


Q ss_pred             HHHHHHHhcCCCeeEEEeCCCc
Q psy14589        169 RFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       169 d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      .+.+.+.+..+++|+++.++|.
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            2333333333489999999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.28  E-value=0.0025  Score=58.17  Aligned_cols=96  Identities=6%  Similarity=-0.153  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcC-CCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYG-SELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~-~gvDvV~D~  187 (655)
                      -.++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.+++.|...+. |.++.      +.+.+.+ .++|+++-+
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~------~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANE------EIMQLAHLECAKWLILT   78 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSH------HHHHHTTGGGCSEEEEC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCH------HHHHhcCcccCCEEEEE
Confidence            3568999999 9999999999999999999999999999999999987554 22221      2233322 278999999


Q ss_pred             CCcch-HHHHHHHHHHhccccceEEE
Q psy14589        188 FTDPV-YRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       188 vG~~~-~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ++.+. +......++.+.++.+++.-
T Consensus        79 ~~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           79 IPNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCeEEEE
Confidence            98773 11123344555566666554

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.28  E-value=0.00077  Score=67.52  Aligned_cols=81  Identities=21%  Similarity=0.131  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+ .++|....   .|.++.. .+.+.+.+.+..+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            689999999999999999998888999999999998877665 34554433   2333321 122333444434579999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.28  E-value=0.0009  Score=67.32  Aligned_cols=80  Identities=15%  Similarity=0.094  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC-----CCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL-----GAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L-----GAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. ++     |.. .+  .|.++.. .+.+.+.+.+..+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            6789999999999999999887788999999999987765542 22     312 22  3444421 1122333333333


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                       +|+++.++|.
T Consensus        86 -id~lv~~Ag~   95 (260)
T 2z1n_A           86 -ADILVYSTGG   95 (260)
T ss_dssp             -CSEEEECCCC
T ss_pred             -CCEEEECCCC
Confidence             9999999983

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.28  E-value=0.00077  Score=68.90  Aligned_cols=85  Identities=12%  Similarity=0.057  Sum_probs=58.9

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE---EeCCccc-hhHHHHHHHhcC
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~-~~d~~~~i~~~~  178 (655)
                      ...+  .|++|+|+||+||||..+++.....|++|+++++++++.+.+. ++|....   .|.++.. .+.+.+.+.+..
T Consensus        22 ~~~l--~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           22 SMDL--NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             CCTT--TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCC--CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3445  7899999999999999999888888999999999988776653 4554322   3444421 112233333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus       100 g~iD~lv~nAg~  111 (277)
T 4dqx_A          100 GRVDVLVNNAGF  111 (277)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999984

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.28  E-value=0.00084  Score=66.82  Aligned_cols=79  Identities=22%  Similarity=0.143  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE---EeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      .++++|+|+||+||||..+++.....|++|+++++++++.+.+. +++....   .|..+.  +++.+.+.+. +++|++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~-~~id~l   88 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANK--EECSNLISKT-SNLDIL   88 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSH--HHHHHHHHTC-SCCSEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCH--HHHHHHHHhc-CCCCEE
Confidence            48999999999999999998888888999999999988877654 3333222   233332  2333334333 479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        89 i~~Ag~   94 (249)
T 3f9i_A           89 VCNAGI   94 (249)
T ss_dssp             EECCC-
T ss_pred             EECCCC
Confidence            999884

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.28  E-value=0.0018  Score=65.59  Aligned_cols=81  Identities=28%  Similarity=0.241  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC------------hHHHHHH----HhCCCcEE---EeCCccc-hhH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC------------PVGVAKA----YGLGADYV---VDHTIRE-LDR  169 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s------------~~k~~~a----~~LGAd~v---Id~~~~~-~~d  169 (655)
                      .|++|+|+||+||||..+++.....|++|++++++            +++.+.+    .+.|....   .|.++.. .+.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            78999999999999999988888889999999876            4444332    33454322   2444321 112


Q ss_pred             HHHHHHhcCCCeeEEEeCCCc
Q psy14589        170 FANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       170 ~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +.+.+.+..+++|+++.++|.
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            333333333479999999985

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.28  E-value=0.0011  Score=67.02  Aligned_cols=81  Identities=14%  Similarity=0.140  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChHH-HHHH-HhCCCc--EE-EeCCccc-hhHHHHHHHhcCC--
Q psy14589        110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKA-YGLGAD--YV-VDHTIRE-LDRFANQILSYGS--  179 (655)
Q Consensus       110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a-~~LGAd--~v-Id~~~~~-~~d~~~~i~~~~~--  179 (655)
                      .|++++|+||  +||||..+++.....|++|+++++++++ .+.+ .++|..  .+ .|.++.. .+.+.+.+.+..+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6889999999  9999999998888889999999988765 3444 345432  22 3544431 1123333333333  


Q ss_pred             -CeeEEEeCCCc
Q psy14589        180 -ELDADHPGFTD  190 (655)
Q Consensus       180 -gvDvV~D~vG~  190 (655)
                       ++|+++.++|.
T Consensus        86 ~~iD~lv~nAg~   97 (269)
T 2h7i_A           86 NKLDGVVHSIGF   97 (269)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCceEEEECCcc
Confidence             79999999873

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.27  E-value=0.00043  Score=70.37  Aligned_cols=81  Identities=16%  Similarity=-0.034  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+....+.. ..|.++.. .+.+.+.+.+..+++|+++.+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn   94 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNN   94 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            5789999999999999999888888999999999887665433222221 13444421 112333333333589999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        95 Ag~   97 (266)
T 3p19_A           95 AGM   97 (266)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            985

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.26  E-value=0.0013  Score=65.30  Aligned_cols=81  Identities=15%  Similarity=0.013  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC---CcEE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG---ADYV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG---Ad~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|++|+|+||+|+||..+++.....|++|+++++++++.+.+. ++.   --.+  .|..+.. .+.+.+.+.+..+++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6789999999999999999888788999999999887765542 222   1122  2444321 1122223333234799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.26  E-value=0.0004  Score=68.24  Aligned_cols=65  Identities=9%  Similarity=0.028  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|++++|+||+||||...++.....|++|++++++++             .|.++.  +++.+.+.+. +++|+++.++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------~D~~~~--~~v~~~~~~~-g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------LDISDE--KSVYHYFETI-GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------CCTTCH--HHHHHHHHHH-CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------cCCCCH--HHHHHHHHHh-CCCCEEEECCC
Confidence            6789999999999999998877778999999987654             344443  2344444444 47999999988


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        69 ~   69 (223)
T 3uce_A           69 S   69 (223)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.26  E-value=0.0016  Score=66.10  Aligned_cols=81  Identities=17%  Similarity=0.089  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChH---HHHHHH-hCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPV---GVAKAY-GLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~---k~~~a~-~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+  ||||..+++.....|++|++++++++   ..+.+. +.|...+  .|.++.. .+.+.+.+.+..++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999998  99999999888888999999998864   333333 2442222  3444421 11233334343458


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        85 id~lv~nAg~   94 (275)
T 2pd4_A           85 LDFIVHSVAF   94 (275)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999873

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.25  E-value=0.0017  Score=65.32  Aligned_cols=81  Identities=22%  Similarity=0.159  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChH---HHHHHH-hCCCcEEE--eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPV---GVAKAY-GLGADYVV--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~---k~~~a~-~LGAd~vI--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+  ||||..+++.....|++|++++++++   ..+.+. +.|...++  |.++.. .+.+.+.+.+..++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999998  99999998877778999999998875   333332 24433333  444421 11222333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.25  E-value=0.00096  Score=66.93  Aligned_cols=81  Identities=19%  Similarity=0.169  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----C---CCcE-EEeC--Cccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----L---GADY-VVDH--TIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----L---GAd~-vId~--~~~~-~~d~~~~i~~~~  178 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+.+    .   .+.. ..|.  .+.. .+.+.+.+.+..
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            78999999999999999988877889999999999887655421    1   2221 1343  3221 122334444444


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        91 g~id~lv~nAg~  102 (252)
T 3f1l_A           91 PRLDGVLHNAGL  102 (252)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            589999999884

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.25  E-value=0.00045  Score=69.99  Aligned_cols=81  Identities=19%  Similarity=0.139  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++. +.+++.|+..+ .|.++.. .+.+.+.+.+..+++|+++.
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            678999999999999999988778899999999987653 34455665433 2444421 12233444444458999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.25  E-value=0.0005  Score=68.45  Aligned_cols=81  Identities=16%  Similarity=0.031  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc--EE-EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD--YV-VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd--~v-Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|.+|+|+||+||||..+++.....|++|+++++++++.+.+. +++..  .+ .|.++.. .+.+.+.+.+..+++|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            4678999999999999998887788999999999988776653 33322  11 3444321 112333333333579999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        82 vnnAg~   87 (235)
T 3l6e_A           82 LHCAGT   87 (235)
T ss_dssp             EEECCC
T ss_pred             EECCCC
Confidence            999885

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.24  E-value=0.0015  Score=67.23  Aligned_cols=81  Identities=19%  Similarity=0.066  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEEE--eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYVV--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~vI--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+|  |||..+++.....|++|++++++++..+.+    .+.|....+  |.++.. .+.+.+.+.+..++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999987  999988887778899999999987554433    233443333  444421 12233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       109 iD~lVnnAG~  118 (296)
T 3k31_A          109 LDFVVHAVAF  118 (296)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.23  E-value=0.0015  Score=66.93  Aligned_cols=78  Identities=19%  Similarity=0.041  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE---EeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+. +++....   .|.++.  +++.+.+.+. +++|+++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~v~~~~~~~-~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDL--SSVRRFADGV-SGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCH--HHHHHHHHTC-CCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCH--HHHHHHHHhc-CCCCEEE
Confidence            7899999999999999999888888999999999998877664 4543222   233332  2344444444 5799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus        92 ~nAg~   96 (291)
T 3rd5_A           92 NNAGI   96 (291)
T ss_dssp             ECCCC
T ss_pred             ECCcC
Confidence            99884

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.23  E-value=0.0016  Score=65.55  Aligned_cols=79  Identities=14%  Similarity=0.033  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC-----CCc-EE--EeCCccchhHHHH---HHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL-----GAD-YV--VDHTIRELDRFAN---QILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L-----GAd-~v--Id~~~~~~~d~~~---~i~~~  177 (655)
                      .|++|+|+||+||||...++.....|++|+++++++++.+.+. ++     +.. .+  .|.++.  +++.+   .+.+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ--QQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCH--HHHHHHHHHHHHH
Confidence            5789999999999999999888888999999999887655432 22     211 12  244442  23333   33332


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus        84 ~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 FGRLDILVNNAGV   96 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            3479999999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.23  E-value=0.00026  Score=71.73  Aligned_cols=78  Identities=18%  Similarity=0.057  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      +|++++|+||++|||.+.++.....|++|+++++++++++....-.+.. ..|.++.  +++.+.+.+. +++|+++++.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~-g~iDiLVNNA   86 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDS--QRLQRLFEAL-PRLDVLVNNA   86 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCH--HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCH--HHHHHHHHhc-CCCCEEEECC
Confidence            7999999999999999999988889999999999887665432222211 1344443  2444444444 4799999998


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |-
T Consensus        87 Gi   88 (242)
T 4b79_A           87 GI   88 (242)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.23  E-value=0.001  Score=66.98  Aligned_cols=81  Identities=20%  Similarity=0.115  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC--CcEE-EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG--ADYV-VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG--Ad~v-Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+. ++.  +..+ .|.++.. .+.+.+.+.+..+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6889999999999999999888888999999999988776553 343  2222 3444421 112223333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.23  E-value=0.0026  Score=65.00  Aligned_cols=81  Identities=20%  Similarity=0.172  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++ ++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..++
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6889999999999999999888888999999885 55554433    34454322   2444431 12334444444457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       108 iD~lvnnAg~  117 (280)
T 4da9_A          108 IDCLVNNAGI  117 (280)
T ss_dssp             CCEEEEECC-
T ss_pred             CCEEEECCCc
Confidence            9999999986

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.22  E-value=0.00097  Score=67.84  Aligned_cols=81  Identities=16%  Similarity=0.146  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999988878899999999998876654    33454322   3444431 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        83 D~lVnnAG~   91 (264)
T 3tfo_A           83 DVLVNNAGV   91 (264)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.22  E-value=0.00093  Score=64.53  Aligned_cols=92  Identities=14%  Similarity=0.062  Sum_probs=63.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|+|+||+|+||..+++.+...|.+|+++++++++.+.+. .++..+. |..+.   +. +.+    .++|+|+.++|..
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~---~~-~~~----~~~d~vi~~ag~~   72 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDL---TL-SDL----SDQNVVVDAYGIS   72 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGC---CH-HHH----TTCSEEEECCCSS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccCh---hh-hhh----cCCCEEEECCcCC
Confidence            6999999999999999988889999999999988776554 4444332 33222   11 222    3689999999874


Q ss_pred             h------HHHHHHHHHHhccc--cceEEEe
Q psy14589        192 V------YRARRKYFADLAFN--YKHFFFF  213 (655)
Q Consensus       192 ~------~~~l~~~l~~l~~g--Grlv~v~  213 (655)
                      .      .......++.++..  +++|.++
T Consensus        73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S  102 (221)
T 3ew7_A           73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVG  102 (221)
T ss_dssp             TTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred             ccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence            1      12235566666654  5777664

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.22  E-value=0.0013  Score=66.14  Aligned_cols=81  Identities=21%  Similarity=0.119  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+ .+++... .  .|.++.. .+.+.+.+.+..+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            688999999999999999888778899999999998876655 3444332 2  2444431 112333444444589999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.22  E-value=0.00073  Score=67.10  Aligned_cols=78  Identities=21%  Similarity=0.144  Sum_probs=54.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      |++++|+||+||||..+++.....|++|+++++++++  ...++|+..+ .|.++...+++.+.+.+..+++|+++.+.|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag   79 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAA   79 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            5789999999999999998888889999999998766  2344464332 243332112334444433347999999987


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        80 ~   80 (239)
T 2ekp_A           80 V   80 (239)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.21  E-value=0.00051  Score=68.86  Aligned_cols=81  Identities=20%  Similarity=0.181  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc---EEEeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD---YVVDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd---~vId~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. .++..   ...|.++.. .+.+.+.+.+..+++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            7899999999999999999888888999999999988776653 33322   223554431 122333343333579999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.+.|.
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.21  E-value=0.00035  Score=69.26  Aligned_cols=97  Identities=12%  Similarity=0.078  Sum_probs=64.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      ..+|+|+||+|+||..+++.+...| ++|+++++++++.+.+...++..+ .|..+.  +++.+.+    .++|+|+.+.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~----~~~D~vv~~a   96 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNH--AALKQAM----QGQDIVYANL   96 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCH--HHHHHHH----TTCSEEEEEC
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCH--HHHHHHh----cCCCEEEEcC
Confidence            4689999999999999999888889 799999998876544333343332 233332  2333333    2689999998


Q ss_pred             Ccch-HHHHHHHHHHhccc--cceEEEe
Q psy14589        189 TDPV-YRARRKYFADLAFN--YKHFFFF  213 (655)
Q Consensus       189 G~~~-~~~l~~~l~~l~~g--Grlv~v~  213 (655)
                      |... ....+..++.++..  |++|.+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iS  124 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVL  124 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEe
Confidence            8763 12234556665543  5777765

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.20  E-value=0.0011  Score=66.48  Aligned_cols=79  Identities=22%  Similarity=0.117  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccchhHHH---HHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRELDRFA---NQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~~~d~~---~~i~~~~~gvD  182 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+ .++|....   .|.++.  +++.   +.+.+..+++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIE--EDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCH--HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCH--HHHHHHHHHHHHHcCCCC
Confidence            688999999999999999988888899999999998876654 44554322   244432  2333   33333334799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.20  E-value=0.0021  Score=64.20  Aligned_cols=79  Identities=15%  Similarity=0.066  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcEE---EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADYV---VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~---~i~~~~  178 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++ ++++.+.+    ++.|....   .|..+.  +++.+   .+.+..
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE--SDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH--HHHHHHHHHHHHHc
Confidence            5789999999999999999887788999999998 76655443    33454321   244432  23332   333223


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        84 g~id~li~~Ag~   95 (261)
T 1gee_A           84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.20  E-value=0.0011  Score=66.63  Aligned_cols=81  Identities=20%  Similarity=0.126  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC----CCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL----GADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L----GAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+. ++    |....   .|.++.. .+.+.+.+.+..++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6889999999999999999888888999999999987765442 22    43321   2444421 11222333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.19  E-value=0.0013  Score=65.76  Aligned_cols=81  Identities=17%  Similarity=0.116  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHH-HHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVA-KAYGLGADYV---VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~-~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      .|++++|+||+||||..+++.....|++|+++++++ ++.+ .+++.|....   .|.++.. .+.+.+.+.+..+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            688999999999999999988888899999999987 6554 3455664322   2444421 11222333333347999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.19  E-value=0.0011  Score=66.89  Aligned_cols=81  Identities=14%  Similarity=0.090  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC-----CCcE-E--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL-----GADY-V--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L-----GAd~-v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. ++     |... .  .|.++.. .+.+.+.+.+..+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6889999999999999999887778999999999987765542 11     4332 2  2444421 1122233333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        92 ~id~lv~nAg~  102 (267)
T 1iy8_A           92 RIDGFFNNAGI  102 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.19  E-value=0.00097  Score=66.29  Aligned_cols=77  Identities=16%  Similarity=0.077  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE--EeCCccc-hhHHHHHHHhcC--CCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV--VDHTIRE-LDRFANQILSYG--SELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v--Id~~~~~-~~d~~~~i~~~~--~gvDv  183 (655)
                      ..|++|+|+||+||||..+++.....|++|+++++++++.+     +....  .|.++.. .+.+.+.+.+..  +++|+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            46889999999999999999888888999999998865532     11111  1332221 012222333222  47999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        80 lv~~Ag~   86 (241)
T 1dhr_A           80 ILCVAGG   86 (241)
T ss_dssp             EEECCCC
T ss_pred             EEEcccc
Confidence            9999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.19  E-value=0.0015  Score=58.68  Aligned_cols=75  Identities=16%  Similarity=0.084  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhc-CCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSY-GSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~-~~gvDvV~D~  187 (655)
                      ++++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.+++.|...+. |..+      .+.+.+. ..++|+|+.+
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~------~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATE------ENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTC------HHHHHTTTGGGCSEEEEC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCC------HHHHHhcCCCCCCEEEEC
Confidence            4678999998 9999999999999999999999988887777777764332 2222      1223332 2378999999


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      ++.+
T Consensus        78 ~~~~   81 (144)
T 2hmt_A           78 IGAN   81 (144)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            9975

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.18  E-value=0.001  Score=67.59  Aligned_cols=81  Identities=17%  Similarity=0.064  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+ .++|....   .|.++.. .+.+.+.+.+..+++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            789999999999999999988888899999999998877665 45564432   2444321 112333333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.18  E-value=0.00096  Score=66.54  Aligned_cols=78  Identities=17%  Similarity=0.037  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE--EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV--VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.+++--..  .|.++.  +++. .+.+..+++|+++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~~~-~~~~~~~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK--KQID-QFANEVERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH--HHHH-HHHHHCSCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCH--HHHH-HHHHHhCCCCEEEEC
Confidence            68899999999999999998888889999999998877655444431122  244432  2333 343334479999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        82 Ag~   84 (246)
T 2ag5_A           82 AGF   84 (246)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            884

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.17  E-value=0.0013  Score=66.81  Aligned_cols=81  Identities=16%  Similarity=0.138  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-----hCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-----GLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.     +.|....   .|.++.. .+.+.+.+.+..++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            7889999999999999999888888999999999987765432     2254322   2444421 11222333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       100 iD~lvnnAg~  109 (267)
T 1vl8_A          100 LDTVVNAAGI  109 (267)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.17  E-value=0.0035  Score=62.94  Aligned_cols=80  Identities=18%  Similarity=0.111  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccc-hhHHHHHHHhc-CCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRE-LDRFANQILSY-GSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~-~~d~~~~i~~~-~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.    +.|... .  .|.++.. .+.+.+.+.+. .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999888888999999999887765442    224322 1  2444421 11223333332 457


Q ss_pred             eeEEEeCCC
Q psy14589        181 LDADHPGFT  189 (655)
Q Consensus       181 vDvV~D~vG  189 (655)
                      +|+++.++|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999995

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.16  E-value=0.0017  Score=65.53  Aligned_cols=81  Identities=10%  Similarity=0.063  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||...++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..+++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999888878899999999998876554    33454322   2444431 122334444444589


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        90 d~lv~nAg~   98 (264)
T 3ucx_A           90 DVVINNAFR   98 (264)
T ss_dssp             SEEEECCCS
T ss_pred             cEEEECCCC
Confidence            999998865

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.16  E-value=0.0019  Score=66.07  Aligned_cols=81  Identities=15%  Similarity=0.023  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHHH-----hCCCcEE---EeCCc----cc-hhHHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKAY-----GLGADYV---VDHTI----RE-LDRFANQIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a~-----~LGAd~v---Id~~~----~~-~~d~~~~i~  175 (655)
                      .|.+++|+||+||||..+++.....|++|+++++++ ++.+.+.     +.|....   .|.++    .. .+.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            688999999999999999987777899999999987 6554432     3343322   24443    21 112223333


Q ss_pred             hcCCCeeEEEeCCCc
Q psy14589        176 SYGSELDADHPGFTD  190 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~  190 (655)
                      +..+++|+++.++|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence            333479999999884

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.15  E-value=0.0044  Score=56.19  Aligned_cols=75  Identities=20%  Similarity=0.116  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcC-CCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYG-SELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~-~gvDvV~D~  187 (655)
                      .+++|+|.|+ |.+|..+++.++..|.+|+++++++++.+.+++.|...+. |..+      .+.+.+.. .++|+|+-+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~------~~~l~~~~~~~~d~vi~~   77 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTD------ESFYRSLDLEGVSAVLIT   77 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTC------HHHHHHSCCTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCC------HHHHHhCCcccCCEEEEe
Confidence            3567999999 9999999999999999999999999999988888875443 3222      12233332 378999999


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      ++..
T Consensus        78 ~~~~   81 (141)
T 3llv_A           78 GSDD   81 (141)
T ss_dssp             CSCH
T ss_pred             cCCH
Confidence            9965

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.15  E-value=0.0012  Score=66.30  Aligned_cols=81  Identities=19%  Similarity=0.104  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+. +++....   .|.++.. .+++.+.+.+..+++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6889999999999999999888888999999999988876653 4553322   2444321 112233333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.15  E-value=0.0025  Score=65.55  Aligned_cols=81  Identities=15%  Similarity=0.027  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--HHHHH----HHhCCCcEEE---eCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP--VGVAK----AYGLGADYVV---DHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~----a~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++++|+||+||||..+++.....|++|++++++.  ++.+.    +++.|....+   |.++.. .+.+.+.+.+..+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            789999999999999999988888899999988762  22322    2345654332   333321 1123333433335


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus       128 ~iD~lv~nAg~  138 (294)
T 3r3s_A          128 GLDILALVAGK  138 (294)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.15  E-value=0.0014  Score=65.62  Aligned_cols=81  Identities=20%  Similarity=0.091  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.    +.|....   .|.++.. .+.+.+.+.+..+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999888888999999999987765542    3354322   2444421 112223333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        86 d~lv~nAg~   94 (247)
T 2jah_A           86 DILVNNAGI   94 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.15  E-value=0.0013  Score=63.76  Aligned_cols=93  Identities=18%  Similarity=0.218  Sum_probs=63.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|+|+||+|+||..+++.+...|.+|+++++++++.+.+...++..+. |..+.   +. +.+    .++|+|+.++|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~---~~-~~~----~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVL---TE-ADL----DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGC---CH-HHH----TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccc---cH-hhc----ccCCEEEECCccC
Confidence            699999999999999998888899999999999887766555655442 33322   11 222    3789999999872


Q ss_pred             --------hHHHHHHHHHHhcc-ccceEEEe
Q psy14589        192 --------VYRARRKYFADLAF-NYKHFFFF  213 (655)
Q Consensus       192 --------~~~~l~~~l~~l~~-gGrlv~v~  213 (655)
                              ........++.++. ++++|.+.
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence                    11223455555544 35666664

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.14  E-value=0.0014  Score=66.27  Aligned_cols=81  Identities=14%  Similarity=0.032  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCc--EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGAD--YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd--~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.    + .+..  ..  .|.++.. ...+.+.+.+..+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999888888999999999988765542    2 3332  12  2444421 1123333433335


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.14  E-value=0.0016  Score=66.53  Aligned_cols=81  Identities=21%  Similarity=0.231  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. ...+.+.+.+..+++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999887777899999999998776554    33454332   2444321 112233333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       103 d~lv~nAg~  111 (279)
T 3sju_A          103 GILVNSAGR  111 (279)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999884

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.14  E-value=0.0014  Score=66.77  Aligned_cols=81  Identities=16%  Similarity=0.196  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            678999999999999999988888899999999998776543    33354322   2444321 112233333334579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.14  E-value=0.0013  Score=66.45  Aligned_cols=81  Identities=15%  Similarity=0.049  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc--EE--EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD--YV--VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd--~v--Id~~~~~-~~d~~~~i~~~~  178 (655)
                      +|++++|+||+|  |||.+.++.....|++|+.+++++++++.+.    ++|..  ..  .|.++.. ..++.+.+.+..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            799999999976  9999988887788999999999987765543    34432  12  3544431 122333344434


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        85 G~iD~lvnnAg~   96 (256)
T 4fs3_A           85 GNIDGVYHSIAF   96 (256)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEecccc
Confidence            589999999874

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=97.13  E-value=0.0002  Score=70.93  Aligned_cols=98  Identities=11%  Similarity=0.058  Sum_probs=69.7

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCC-cEE-EeCCccchhHHHHHHHhcC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGA-DYV-VDHTIRELDRFANQILSYG  178 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGA-d~v-Id~~~~~~~d~~~~i~~~~  178 (655)
                      ..+ ++|++||..|+ | .|.+++++++. +.+|++++.+++.++.+++    .|. +.+ +-..     ++.+... ..
T Consensus        87 ~~~-~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~~~~-~~  156 (248)
T 2yvl_A           87 LNL-NKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-----DFKDAEV-PE  156 (248)
T ss_dssp             TTC-CTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-----CTTTSCC-CT
T ss_pred             cCC-CCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-----Chhhccc-CC
Confidence            455 78999999998 5 79999999998 8899999999988887764    343 211 1111     1111110 11


Q ss_pred             CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++|+|+...+.. .+.++.+.+.|++||+++++.
T Consensus       157 ~~~D~v~~~~~~~-~~~l~~~~~~L~~gG~l~~~~  190 (248)
T 2yvl_A          157 GIFHAAFVDVREP-WHYLEKVHKSLMEGAPVGFLL  190 (248)
T ss_dssp             TCBSEEEECSSCG-GGGHHHHHHHBCTTCEEEEEE
T ss_pred             CcccEEEECCcCH-HHHHHHHHHHcCCCCEEEEEe
Confidence            3799999887754 123889999999999999875

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.13  E-value=0.00054  Score=70.22  Aligned_cols=81  Identities=16%  Similarity=0.090  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC---CCc--EE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL---GAD--YV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L---GAd--~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+||+||||..+++.....|++|+++++++++.+.+. ++   |..  ..  .|.++.. .+++.+.+.+..++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999998887788999999999988765543 22   221  22  3544431 12233344443457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.13  E-value=0.0015  Score=66.77  Aligned_cols=81  Identities=20%  Similarity=0.106  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. ++|....   .|.++.. ...+.+.+.+..+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6889999999999999999888888999999999988876653 4554322   2444321 112333333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999884

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.13  E-value=0.002  Score=64.48  Aligned_cols=81  Identities=16%  Similarity=0.048  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLGADYV---VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++  .+.+.+.|....   .|.++.. .+.+.+.+.+..+++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999998888889999999887642  223344454332   2444321 11222333333347999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        83 lv~~Ag~   89 (255)
T 2q2v_A           83 LVNNAGI   89 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.12  E-value=0.0015  Score=64.38  Aligned_cols=77  Identities=18%  Similarity=0.092  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C-CCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L-GADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L-GAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +|.+|+|+||+|+||..+++.....|++|+++++++++.+.+.+ + +...+ .|..+.  +++.+.+. ..+++|+++.
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~-~~~~id~vi~   82 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW--DATEKALG-GIGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH--HHHHHHHT-TCCCCSEEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCH--HHHHHHHH-HcCCCCEEEE
Confidence            68899999999999999998888889999999999877665533 3 33322 243332  23333333 2236899999


Q ss_pred             CCC
Q psy14589        187 GFT  189 (655)
Q Consensus       187 ~vG  189 (655)
                      ++|
T Consensus        83 ~Ag   85 (244)
T 1cyd_A           83 NAA   85 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            988

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.12  E-value=0.0011  Score=65.69  Aligned_cols=75  Identities=19%  Similarity=0.141  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE--eCCccc-hhHHHHHHHhc-C-CCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV--DHTIRE-LDRFANQILSY-G-SELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI--d~~~~~-~~d~~~~i~~~-~-~gvDvV  184 (655)
                      .|.+|+|+||+||||..+++.....|++|+++++++++.+     +....+  |.++.. .+.+.+.+.+. + +++|++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            4678999999999999999888888999999998876532     111121  222210 01122233322 2 479999


Q ss_pred             EeCCC
Q psy14589        185 HPGFT  189 (655)
Q Consensus       185 ~D~vG  189 (655)
                      +.++|
T Consensus        77 v~~Ag   81 (236)
T 1ooe_A           77 FCVAG   81 (236)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99998

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.12  E-value=0.0017  Score=64.48  Aligned_cols=81  Identities=17%  Similarity=0.158  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|..+.. .+.+.+.+.+..+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999998887778899999999998776554    33454322   3444321 122334444444579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.11  E-value=0.0016  Score=65.03  Aligned_cols=81  Identities=17%  Similarity=0.069  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+.    +.|....   .|.++.. .+++.+.+.+..+++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6889999999999999999888888999999999988766542    3343222   2444321 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999885

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.11  E-value=0.0016  Score=64.43  Aligned_cols=81  Identities=15%  Similarity=0.098  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-----CCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-----LGADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-----LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+|+||..+++.....|++|+++++++++.+.+.+     .|... +  .|..+.. .+.+.+.+.+..++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            68899999999999999998887889999999998877655422     24332 2  2444321 11222333333457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        86 ~d~vi~~Ag~   95 (248)
T 2pnf_A           86 IDILVNNAGI   95 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.11  E-value=0.00098  Score=65.73  Aligned_cols=79  Identities=18%  Similarity=0.148  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-----hCCCcEE---EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-----GLGADYV---VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-----~LGAd~v---Id~~~~~~~d~~~---~i~~~~  178 (655)
                      +|++++|+||+||||...++.....|++|+++++++++.+.+.     ..|....   .|.++.  +++.+   .+.+..
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~   78 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA--ESVEEFSKKVLERF   78 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH--HHHHHHCC-HHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCH--HHHHHHHHHHHHhc
Confidence            3678999999999999999888889999999999988765542     2343322   244432  12222   233333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        79 g~id~li~~Ag~   90 (235)
T 3l77_A           79 GDVDVVVANAGL   90 (235)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999885

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.11  E-value=0.0015  Score=66.51  Aligned_cols=81  Identities=21%  Similarity=0.203  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCc--EE----EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGAD--YV----VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd--~v----Id~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+    ++.|..  .+    .|.++.. ...+.+.+.+..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            688999999999999999988778899999999998776543    344531  22    2444421 112333333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999985

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.10  E-value=0.0016  Score=66.03  Aligned_cols=81  Identities=15%  Similarity=0.160  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcC-CC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYG-SE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~-~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|..+.. .+.+.+.+.+.. ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999988888899999999998776543    23454322   3444321 112333333333 58


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999885

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.10  E-value=0.0011  Score=65.74  Aligned_cols=80  Identities=19%  Similarity=0.090  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE--E--EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY--V--VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~--v--Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      .|++|+|+||+|+||..+++.....|++|+++++++++.+.+ .++|...  +  .|..+.. .+...+.+.+ .+++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hCCCcE
Confidence            688999999999999999988888899999999998776554 3444432  2  2444321 1122223333 247999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        89 li~~Ag~   95 (254)
T 2wsb_A           89 LVNSAGI   95 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.10  E-value=0.0011  Score=67.82  Aligned_cols=81  Identities=16%  Similarity=0.077  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+ .++|.. ..  .|.++.. .+.+.+.+.+..+++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            688999999999999999888778899999999998877665 344432 22  2444431 112333333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.09  E-value=0.0011  Score=67.53  Aligned_cols=81  Identities=17%  Similarity=0.140  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCc-E--EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGAD-Y--VVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd-~--vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|.. .  ..|.++.. .+.+.+.+.+..+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999888778899999999998776554    223322 1  23544431 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       107 D~lvnnAg~  115 (270)
T 3ftp_A          107 NVLVNNAGI  115 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.09  E-value=0.0014  Score=66.01  Aligned_cols=81  Identities=14%  Similarity=0.059  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..+++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999998887777899999999998776554    33454322   2444321 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        91 d~lv~nAg~   99 (256)
T 3gaf_A           91 TVLVNNAGG   99 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.09  E-value=0.0011  Score=67.55  Aligned_cols=80  Identities=19%  Similarity=0.138  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE----EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV----VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v----Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+|+|+||+||||..+++.....|++|+++++++++.+.+.    +.|...+    .|.++.. .+.+.+.+.+..++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999888888999999999988766542    3354322    2444321 11223333333347


Q ss_pred             eeEEEeC-CC
Q psy14589        181 LDADHPG-FT  189 (655)
Q Consensus       181 vDvV~D~-vG  189 (655)
                      +|+++.+ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999988 44

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.09  E-value=0.001  Score=67.90  Aligned_cols=81  Identities=16%  Similarity=0.113  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|.. ..  .|.++.. .+++.+.+.+..+++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999988878899999999988776554    334432 22  2444431 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.08  E-value=0.00089  Score=67.90  Aligned_cols=95  Identities=9%  Similarity=-0.075  Sum_probs=63.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +|+|+||+|.||..+++.+... |.+|+++++++++.+.+...|+..+ .|..+.      +.+.+.-.++|+|+.++|.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQ------ESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCH------HHHHHHTTTCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCH------HHHHHHHhCCCEEEEeCCC
Confidence            5999999999999999887777 8999999999887655555565544 244332      2233333479999999885


Q ss_pred             c--hH---HHHHHHHHHhcccc--ceEEEe
Q psy14589        191 P--VY---RARRKYFADLAFNY--KHFFFF  213 (655)
Q Consensus       191 ~--~~---~~l~~~l~~l~~gG--rlv~v~  213 (655)
                      .  ..   ......++.++..|  ++|.+.
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~S  105 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIG  105 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence            3  10   12334555555544  566654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.08  E-value=0.0017  Score=65.18  Aligned_cols=81  Identities=16%  Similarity=0.156  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcC-CC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYG-SE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~-~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+.. ++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999988778899999999988776543    23354321   2444421 112233333333 57


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        88 id~lv~~Ag~   97 (260)
T 2ae2_A           88 LNILVNNAGI   97 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.07  E-value=0.0014  Score=65.00  Aligned_cols=81  Identities=19%  Similarity=0.189  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCC--cEEE--eC--Cccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGA--DYVV--DH--TIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGA--d~vI--d~--~~~~-~~d~~~~i~~~~  178 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+    ++.|.  ..++  |.  .+.. ...+.+.+.+..
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            789999999999999999988888899999999998876654    33332  2222  32  2211 112333343333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        93 g~id~lv~nAg~  104 (247)
T 3i1j_A           93 GRLDGLLHNASI  104 (247)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999884

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.07  E-value=0.0014  Score=65.77  Aligned_cols=80  Identities=20%  Similarity=0.102  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE--eCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV--DHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI--d~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.+++. .++  |.++.. .+.+.+.+.+..+++|+++.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            67899999999999999998888889999999998776333344432 333  444321 11222333333347999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        84 ~Ag~   87 (256)
T 2d1y_A           84 NAAI   87 (256)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.07  E-value=0.0012  Score=66.93  Aligned_cols=81  Identities=19%  Similarity=0.106  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+.    + .|....   .|.++.. .+.+.+.+.+..++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999888888999999999987765542    1 343322   3444431 12334444444457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        99 id~lv~nAg~  108 (266)
T 4egf_A           99 LDVLVNNAGI  108 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CCEEEECCCc
Confidence            9999998874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.06  E-value=0.0019  Score=65.81  Aligned_cols=81  Identities=20%  Similarity=0.153  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. ..++.+.+.+..+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            789999999999999999988888899999999998776554    34454433   2333321 122334444445589


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       105 D~lv~nAg~  113 (271)
T 4ibo_A          105 DILVNNAGI  113 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.06  E-value=0.0019  Score=65.12  Aligned_cols=81  Identities=16%  Similarity=0.038  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. ...+.+.+.+..+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            688999999999999999988888899999999988776543    23354322   2444421 112223333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        86 d~lv~nAg~   94 (262)
T 1zem_A           86 DFLFNNAGY   94 (262)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.05  E-value=0.002  Score=64.64  Aligned_cols=80  Identities=16%  Similarity=0.026  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      |++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|... +  .|.++.. .+++.+.+.+..+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            57899999999999999988888899999999988766543    2335332 2  2444421 1122333333345799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.05  E-value=0.0024  Score=64.98  Aligned_cols=81  Identities=21%  Similarity=0.206  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC------------hHHHHH----HHhCCCcEE---EeCCccc-hhH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC------------PVGVAK----AYGLGADYV---VDHTIRE-LDR  169 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s------------~~k~~~----a~~LGAd~v---Id~~~~~-~~d  169 (655)
                      .|++++|+||+||||..+++.....|++|++++++            .++.+.    +++.|....   .|.++.. .+.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            68999999999999999998888889999999986            333332    344554432   2444431 112


Q ss_pred             HHHHHHhcCCCeeEEEeCCCc
Q psy14589        170 FANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       170 ~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +.+.+.+..+++|+++.++|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            333333333479999999884

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.05  E-value=0.0048  Score=62.90  Aligned_cols=81  Identities=19%  Similarity=0.207  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChH---HHHHHH-hCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPV---GVAKAY-GLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~---k~~~a~-~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+  ||||..+++.....|++|++++++++   ..+.+. +.|...+  .|.++.. .+.+.+.+.+..++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68899999998  99999999887788999999998874   333332 2343222  3444421 11233334333457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       100 iD~lv~~Ag~  109 (285)
T 2p91_A          100 LDIIVHSIAY  109 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.04  E-value=0.0013  Score=67.23  Aligned_cols=81  Identities=19%  Similarity=0.133  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h---CCCcEE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G---LGADYV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~---LGAd~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+. +   .|--.+  .|.++.. .+.+.+.+.+..+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            6889999999999999999888888999999999887765442 2   231111  2433321 1122333333345799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus       108 ~lvnnAg~  115 (276)
T 2b4q_A          108 ILVNNAGT  115 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.04  E-value=0.00056  Score=68.45  Aligned_cols=77  Identities=22%  Similarity=0.175  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+.  |  ...|.++.. .+.+.+.+.+..+++|+++.+.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~A   89 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   89 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6889999999999999999888888999999998765543222  1  334555431 1122333333334799999998


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus        90 g~   91 (247)
T 1uzm_A           90 GL   91 (247)
T ss_dssp             SC
T ss_pred             CC
Confidence            84

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.04  E-value=0.0013  Score=64.14  Aligned_cols=94  Identities=14%  Similarity=0.014  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHHHHHHhcCCCe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      ++|++||-.|+ | .|..++.+|+. +++|++++.+++.++.++    ..|.+   .++....      .+.+.. ...+
T Consensus        54 ~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~------~~~~~~-~~~~  123 (204)
T 3njr_A           54 RRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA------PAALAD-LPLP  123 (204)
T ss_dssp             CTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT------TGGGTT-SCCC
T ss_pred             CCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch------hhhccc-CCCC
Confidence            68999999998 4 48899999988 899999999998887765    35654   2332211      111111 1368


Q ss_pred             eEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+|+...+.... .++.+.+.|++||++++..
T Consensus       124 D~v~~~~~~~~~-~l~~~~~~LkpgG~lv~~~  154 (204)
T 3njr_A          124 EAVFIGGGGSQA-LYDRLWEWLAPGTRIVANA  154 (204)
T ss_dssp             SEEEECSCCCHH-HHHHHHHHSCTTCEEEEEE
T ss_pred             CEEEECCcccHH-HHHHHHHhcCCCcEEEEEe
Confidence            999866544432 5889999999999998865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.03  E-value=0.0011  Score=67.44  Aligned_cols=81  Identities=23%  Similarity=0.166  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY---VVDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+ .++|...   ..|.++.. .+++.+.+.+..+++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            688999999999999999988888899999999988776654 3444322   13444431 112333333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998874

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.02  E-value=0.0019  Score=68.85  Aligned_cols=96  Identities=13%  Similarity=0.033  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-------------EeCCccchhHH-HHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-------------VDHTIRELDRF-ANQIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-------------Id~~~~~~~d~-~~~i~  175 (655)
                      +|++|.|.|. |.||+.+++.++.+|++|++.+.++++.+.++++|++.+             +......  .+ .+.+.
T Consensus       174 ~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~--~I~~~~~~  250 (355)
T 1c1d_A          174 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGG--VITTEVAR  250 (355)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSC--CBCHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHh--hcCHHHHh
Confidence            8999999998 999999999999999999999988776556666776432             2211110  00 11122


Q ss_pred             hcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        176 SYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..  +.++|+++..++.  ..+++.++|+.+|.++.-
T Consensus       251 ~l--k~~iVie~AN~p~--t~~eA~~~L~~~gIlv~P  283 (355)
T 1c1d_A          251 TL--DCSVVAGAANNVI--ADEAASDILHARGILYAP  283 (355)
T ss_dssp             HC--CCSEECCSCTTCB--CSHHHHHHHHHTTCEECC
T ss_pred             hC--CCCEEEECCCCCC--CCHHHHHHHHhCCEEEEC
Confidence            22  4789999998884  034778899998876653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.02  E-value=0.0015  Score=65.79  Aligned_cols=81  Identities=14%  Similarity=0.092  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.+    .|....   .|.++.. .+.+.+.+.+..+++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68899999999999999998888889999999999887766532    333221   3444421 112333333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        85 d~lv~nAg~   93 (257)
T 3imf_A           85 DILINNAAG   93 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999983

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.01  E-value=0.0046  Score=61.57  Aligned_cols=81  Identities=15%  Similarity=0.109  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .+++++|+||+||||..+++.....|++|+++++ ++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999888888999988776 44444333    34555432   2444321 11223333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.01  E-value=0.00093  Score=67.09  Aligned_cols=81  Identities=17%  Similarity=0.053  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+ .++|.. ..  .|.++.. .+.+.+.+.+..+++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            688999999999999999988888899999999988766554 344432 12  2444321 112333333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.01  E-value=0.0015  Score=65.04  Aligned_cols=81  Identities=19%  Similarity=0.153  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++ ++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999888888999999988 76665443    33454322   2444421 11222333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        83 id~lv~nAg~   92 (246)
T 2uvd_A           83 VDILVNNAGV   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.00  E-value=0.0023  Score=64.88  Aligned_cols=81  Identities=19%  Similarity=0.112  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+    ++.|... +  .|..+.. .+++.+.+.+..+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            688999999999999999988888899999999988766543    3345432 2  2444321 112233333334579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.00  E-value=0.0017  Score=65.56  Aligned_cols=81  Identities=14%  Similarity=-0.003  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+ .+++.. .+  .|.++.. .+.+.+.+.+..+++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            688999999999999999988778899999999998776654 344322 12  3444421 112223333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999883

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.00  E-value=0.0019  Score=65.39  Aligned_cols=78  Identities=17%  Similarity=0.067  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hC--CCcE-E--EeCCccchhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GL--GADY-V--VDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~L--GAd~-v--Id~~~~~~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.    +.  +... .  .|.++.  +++.+.+ +.-++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~-~~~g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE--QGCQDVI-EKYPK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH--HHHHHHH-HHCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH--HHHHHHH-HhcCC
Confidence            6899999999999999999887788999999999987765432    22  2211 1  233332  2333333 33347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.00  E-value=0.0028  Score=64.44  Aligned_cols=81  Identities=20%  Similarity=0.160  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-------------ChHHHHHH----HhCCCcEE---EeCCccc-hh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-------------CPVGVAKA----YGLGADYV---VDHTIRE-LD  168 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-------------s~~k~~~a----~~LGAd~v---Id~~~~~-~~  168 (655)
                      .|++++|+||+||||..+++.....|++|+++++             ++++.+.+    ++.|....   .|.++.. .+
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            7899999999999999999888888999999987             55555443    34454332   3444431 11


Q ss_pred             HHHHHHHhcCCCeeEEEeCCCc
Q psy14589        169 RFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       169 d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      .+.+.+.+..+++|+++.++|.
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            2333333333479999999884

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.99  E-value=0.0015  Score=65.65  Aligned_cols=81  Identities=16%  Similarity=0.164  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHHH-hC----CCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKAY-GL----GADYV---VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a~-~L----GAd~v---Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++ .+.+. ++    |....   .|.++.. .+.+.+.+.+..+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999998888889999999988766 54432 22    43322   2444321 1122233333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.99  E-value=0.0019  Score=65.35  Aligned_cols=81  Identities=12%  Similarity=0.055  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHHH-hC----CCcE-E--EeCCcc----c-hhHHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKAY-GL----GADY-V--VDHTIR----E-LDRFANQIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a~-~L----GAd~-v--Id~~~~----~-~~d~~~~i~  175 (655)
                      .|.+++|+||+||||..+++.....|++|+++++ ++++.+.+. ++    |... +  .|.++.    . .+.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            5789999999999999999888788999999999 877665442 22    4322 2  243332    1 112223333


Q ss_pred             hcCCCeeEEEeCCCc
Q psy14589        176 SYGSELDADHPGFTD  190 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~  190 (655)
                      +..+++|+++.++|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence            333479999999884

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.99  E-value=0.00065  Score=68.35  Aligned_cols=93  Identities=12%  Similarity=-0.021  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCc-EEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +++++||..|+ |. |..+.++++.. |++|++++.+++.++.+++.+.. .++.....   ++    .-..+.+|+|+.
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~---~~----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH---RL----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT---SC----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchh---hC----CCCCCceeEEEE
Confidence            47889999998 55 88999999986 78999999999999888876543 22222111   11    001236999996


Q ss_pred             CCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        187 GFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ......   ++...+.|++||+++++.
T Consensus       155 ~~~~~~---l~~~~~~L~pgG~l~~~~  178 (269)
T 1p91_A          155 IYAPCK---AEELARVVKPGGWVITAT  178 (269)
T ss_dssp             ESCCCC---HHHHHHHEEEEEEEEEEE
T ss_pred             eCChhh---HHHHHHhcCCCcEEEEEE
Confidence            544446   889999999999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.99  E-value=0.0024  Score=64.04  Aligned_cols=82  Identities=12%  Similarity=0.053  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      ..+++|+|+||+  ||||..+++.....|++|++++++++..+.+    .+.|.-.+  .|.++.. .+.+.+.+.+..+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            478999999998  9999999888878899999998875443333    33443233  3444321 1223444444445


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        92 ~id~lv~nAg~  102 (271)
T 3ek2_A           92 SLDGLVHSIGF  102 (271)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            89999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.99  E-value=0.0017  Score=65.19  Aligned_cols=81  Identities=17%  Similarity=0.138  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|..+.. .+.+.+.+.+..+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            688999999999999999988888899999999988766543    23454322   2444321 112223333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        93 D~lv~~Ag~  101 (260)
T 2zat_A           93 DILVSNAAV  101 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.98  E-value=0.0018  Score=64.70  Aligned_cols=81  Identities=16%  Similarity=0.018  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+ +++|... +  .|..+.. .+.+.+.+.+..+++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            688999999999999999988888899999999987766554 3445432 2  2444321 112223333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.98  E-value=0.00096  Score=67.74  Aligned_cols=81  Identities=20%  Similarity=0.171  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .+++|+|+||+||||..+++.....|++|+++++++++.+.+. +++... .  .|.++.. .+.+.+.+.+..+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5789999999999999999888889999999999988766653 444322 2  2444321 112233333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.98  E-value=0.0016  Score=66.66  Aligned_cols=80  Identities=19%  Similarity=0.123  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+.    +.|....   .|.++.. .+.+.+.+.+..+++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6889999999999999999888888999999999988766553    2343322   2333321 112333333333479


Q ss_pred             eEEEeCCC
Q psy14589        182 DADHPGFT  189 (655)
Q Consensus       182 DvV~D~vG  189 (655)
                      |+++.++|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.98  E-value=0.0012  Score=67.30  Aligned_cols=81  Identities=17%  Similarity=0.144  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCC---c-EE--EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGA---D-YV--VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGA---d-~v--Id~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+.    +.|.   . .+  .|.++.. .+.+.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            6789999999999999999888888999999999987765542    2343   2 22  2444421 112223333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        85 g~iD~lv~nAg~   96 (280)
T 1xkq_A           85 GKIDVLVNNAGA   96 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.97  E-value=0.0027  Score=64.46  Aligned_cols=81  Identities=15%  Similarity=0.131  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE--eCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV--DHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI--d~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. ++.....+  |.++.. .+.+.+.+.+..+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6889999999999999999888888999999999988776553 34322222  444321 1122233333334799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.96  E-value=0.0026  Score=65.57  Aligned_cols=81  Identities=23%  Similarity=0.245  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC------------hHHHHH----HHhCCCcEE---EeCCccc-hhH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC------------PVGVAK----AYGLGADYV---VDHTIRE-LDR  169 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s------------~~k~~~----a~~LGAd~v---Id~~~~~-~~d  169 (655)
                      .|++++|+||+||||..+++.....|++|++++++            +++.+.    +++.|....   .|.++.. .+.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            78999999999999999988888889999999876            444433    344565432   3444421 112


Q ss_pred             HHHHHHhcCCCeeEEEeCCCc
Q psy14589        170 FANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       170 ~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +.+.+.+..+++|+++.++|.
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHhCCCCEEEECCCC
Confidence            333333333479999998874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.95  E-value=0.0018  Score=65.64  Aligned_cols=79  Identities=18%  Similarity=0.119  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCC-cEE----EeCCccchhHHH---HHHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGA-DYV----VDHTIRELDRFA---NQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGA-d~v----Id~~~~~~~d~~---~~i~~~  177 (655)
                      .|++|+|+||+|+||..+++.....|++|+++++++++.+.+    ++.|. ..+    .|..+.  +++.   +.+.+.
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE--EDILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH--HHHHHHHHHHHHh
Confidence            678999999999999999988888899999999988766544    33442 122    244432  2333   233332


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus       109 ~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          109 HSGVDICINNAGL  121 (279)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            3479999999884

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.95  E-value=0.0017  Score=65.49  Aligned_cols=81  Identities=17%  Similarity=0.164  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE----EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV----VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v----Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|...+    .|.++.. .+.+.+.+.+..++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999988888899999999998876554    33442222    2444321 11233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        89 id~lvnnAg~   98 (262)
T 3pk0_A           89 IDVVCANAGV   98 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.95  E-value=0.0014  Score=66.82  Aligned_cols=81  Identities=11%  Similarity=-0.102  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH---HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA---YGLGADY-V--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a---~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      +|++++|+||++|||.+.++.....|++|+++++++++.+.+   .+.|... .  .|.++.. .+++.+.+.+.-+++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999998887777899999999887654433   3334322 2  3444431 1223333333335899


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      ++++++|.
T Consensus        86 iLVNnAGi   93 (258)
T 4gkb_A           86 GLVNNAGV   93 (258)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.95  E-value=0.0022  Score=64.21  Aligned_cols=81  Identities=14%  Similarity=0.041  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+ .++|....   .|.++.. .+.+.+.+.+..+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            688999999999999999988888899999999998776654 34453322   2443321 112223333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.94  E-value=0.0031  Score=64.43  Aligned_cols=80  Identities=10%  Similarity=0.103  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC----CCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL----GADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L----GAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+. ++    |... +  .|..+.. ...+.+.+.+..++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            6889999999999999999888888999999999987765432 22    4322 2  2444321 11223333333457


Q ss_pred             eeEEEeCCC
Q psy14589        181 LDADHPGFT  189 (655)
Q Consensus       181 vDvV~D~vG  189 (655)
                      +|+++.++|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.92  E-value=0.0029  Score=63.75  Aligned_cols=81  Identities=16%  Similarity=0.142  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++|+|+||+||||..+++.....|++|+++ ++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68899999999999999998888889999886 7777665543    33454332   2444321 11233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        83 id~lv~nAg~   92 (258)
T 3oid_A           83 LDVFVNNAAS   92 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999974

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.92  E-value=0.00098  Score=62.20  Aligned_cols=97  Identities=14%  Similarity=-0.002  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHH----hCCCc-EE-EeCCccchhHHHHHHHhcCCCe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAY----GLGAD-YV-VDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~----~LGAd-~v-Id~~~~~~~d~~~~i~~~~~gv  181 (655)
                      ++|++||-.|+ | .|..+..+++.. +++|++++.+++..+.++    ..|.+ .+ +. .+     ..+.+....+.+
T Consensus        24 ~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~d-----~~~~~~~~~~~~   95 (178)
T 3hm2_A           24 KPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQ-QG-----APRAFDDVPDNP   95 (178)
T ss_dssp             CTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEE-CC-----TTGGGGGCCSCC
T ss_pred             cCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEe-cc-----hHhhhhccCCCC
Confidence            68999999998 4 488999999887 569999999998877775    35654 22 22 11     111222222479


Q ss_pred             eEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+|+...+-...+.++.+.+.|++||++++..
T Consensus        96 D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  127 (178)
T 3hm2_A           96 DVIFIGGGLTAPGVFAAAWKRLPVGGRLVANA  127 (178)
T ss_dssp             SEEEECC-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred             CEEEECCcccHHHHHHHHHHhcCCCCEEEEEe
Confidence            99986553331123889999999999998764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.91  E-value=0.002  Score=64.89  Aligned_cols=81  Identities=17%  Similarity=0.153  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC---cEE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA---DYV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA---d~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+ .+++.   -.+  .|.++.. .+.+.+.+.+..+++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            688999999999999999988878899999999987765543 33332   122  2444321 1122223333334799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998873

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.91  E-value=0.0025  Score=65.27  Aligned_cols=81  Identities=21%  Similarity=0.119  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+||+||||..+++.....|++|+++++++++.+.+.    +.|....   .|.++.. .+.+.+.+.+..+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6889999999999999999887788999999999988766543    2343322   2444321 112333333333579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       107 D~lVnnAg~  115 (283)
T 3v8b_A          107 DIVVANAGI  115 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.91  E-value=0.003  Score=62.09  Aligned_cols=79  Identities=20%  Similarity=0.092  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE--eCCccchhHHHH---HHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV--DHTIRELDRFAN---QILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI--d~~~~~~~d~~~---~i~~~~~gvDv  183 (655)
                      .+.+|+|+||+|+||..+++.....|++|+++++++++.+.+. +++...++  |..+.  +++.+   .+.+..+++|+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREE--GDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH--HHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCH--HHHHHHHHHHHHHcCCCCE
Confidence            4678999999999999999888888999999999988776553 34322332  44432  23333   33332347999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        82 li~~Ag~   88 (234)
T 2ehd_A           82 LVNNAGV   88 (234)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999884

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.91  E-value=0.0026  Score=64.73  Aligned_cols=80  Identities=16%  Similarity=0.096  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h----CCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G----LGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~----LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. +    .|....   .|.++.. .+.+.+.+.+..++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999888888999999999987654432 2    243322   2444431 11233333333347


Q ss_pred             eeEEEeCCC
Q psy14589        181 LDADHPGFT  189 (655)
Q Consensus       181 vDvV~D~vG  189 (655)
                      +|+++.++|
T Consensus       106 id~lv~nAg  114 (277)
T 4fc7_A          106 IDILINCAA  114 (277)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999998

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.91  E-value=0.0021  Score=65.52  Aligned_cols=81  Identities=15%  Similarity=0.083  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+. +++.. .+  .|.++.. .+.+.+.+.+..+++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6789999999999999998888788999999999988776653 44422 22  2444431 112333333333479999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus       107 VnnAg~  112 (272)
T 4dyv_A          107 FNNAGT  112 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999885

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.89  E-value=0.0031  Score=63.26  Aligned_cols=80  Identities=14%  Similarity=0.047  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      |++++|+||+||||..+++.....|++|+++++++++  .+.+    ++.|....   .|.++.. .+.+.+.+.+..++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6789999999999999988777789999999988766  4332    23343322   2444421 11223333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.89  E-value=0.0025  Score=65.05  Aligned_cols=80  Identities=16%  Similarity=0.068  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. ..++.+.+.+. +++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~i  110 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APV  110 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCC
Confidence            689999999999999999988888899999999987665443    33454322   2433321 12344444444 579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       111 D~lvnnAg~  119 (275)
T 4imr_A          111 DILVINASA  119 (275)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.89  E-value=0.00061  Score=67.99  Aligned_cols=94  Identities=14%  Similarity=0.049  Sum_probs=58.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      ++|+|+||+||||..+++.....|++|+++++++++.+.      +...|.++.  +++.+.+.+..+++|+++.++|..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~~~~Dl~~~--~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------DLSTAEGRK--QAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHHH--HHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------ccccCCCCH--HHHHHHHHHhCCCCCEEEECCCCC
Confidence            479999999999999998888889999999987654321      100111111  122222333324789999998753


Q ss_pred             h----------------HHHHHHHHHHhccc--cceEEEe
Q psy14589        192 V----------------YRARRKYFADLAFN--YKHFFFF  213 (655)
Q Consensus       192 ~----------------~~~l~~~l~~l~~g--Grlv~v~  213 (655)
                      .                +...+.+++.++..  |++|.++
T Consensus        74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~is  113 (257)
T 1fjh_A           74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVIS  113 (257)
T ss_dssp             TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEEC
T ss_pred             CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEEC
Confidence            2                12234455555443  8888886

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.89  E-value=0.0016  Score=67.23  Aligned_cols=81  Identities=17%  Similarity=0.117  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCC---c-EE--EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGA---D-YV--VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGA---d-~v--Id~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++.+.+    .+.|.   . .+  .|.++.. .+.+.+.+.+..
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            688999999999999999988878899999999998776544    23343   2 22  3444421 112223333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus       105 g~iD~lvnnAG~  116 (297)
T 1xhl_A          105 GKIDILVNNAGA  116 (297)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.89  E-value=0.0029  Score=64.55  Aligned_cols=81  Identities=17%  Similarity=0.137  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+    ++.|....   .|.++.. .+++.+.+.+..+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999988777899999988887765543    33454322   2444321 112223333334579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.89  E-value=0.0034  Score=61.72  Aligned_cols=77  Identities=13%  Similarity=0.081  Sum_probs=54.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc---EEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD---YVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd---~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ++|+|+||+||||..+++.....|++|+++++++++.+.+. +++..   ...|..+.  +++.+.+.+....+|+++.+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH--QEVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH--HHHHHHHHSCSSCCSEEEEC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH--HHHHHHHHHHhhcCCEEEEe
Confidence            36999999999999999888888999999999998877764 44322   12344442  24444444444445999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        80 Ag~   82 (230)
T 3guy_A           80 AGS   82 (230)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            884

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.88  E-value=0.004  Score=63.46  Aligned_cols=81  Identities=23%  Similarity=0.210  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC----------------hHHHHHH----HhCCCcEE---EeCCccc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC----------------PVGVAKA----YGLGADYV---VDHTIRE  166 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s----------------~~k~~~a----~~LGAd~v---Id~~~~~  166 (655)
                      .|++++|+||+||||..+++.....|++|++++++                +++++.+    ++.|....   .|.++..
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            78999999999999999988888889999999876                4544433    33454322   2444421


Q ss_pred             -hhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        167 -LDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       167 -~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                       .+.+.+.+.+..+++|+++.++|.
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcc
Confidence             112333333333479999999884

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.88  E-value=0.0018  Score=66.22  Aligned_cols=81  Identities=19%  Similarity=0.132  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-----------HHHHHhCCCcEE---EeCCccc-hhHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-----------VAKAYGLGADYV---VDHTIRE-LDRFANQI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-----------~~~a~~LGAd~v---Id~~~~~-~~d~~~~i  174 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++           .+.+++.|....   .|.++.. .+.+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            68899999999999999988877889999999998652           222334454322   2444431 12233344


Q ss_pred             HhcCCCeeEEEeCCCc
Q psy14589        175 LSYGSELDADHPGFTD  190 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~  190 (655)
                      .+..+++|+++.++|.
T Consensus        88 ~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            4433479999999884

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.88  E-value=0.0018  Score=66.84  Aligned_cols=81  Identities=19%  Similarity=0.181  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE----EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV----VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v----Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+.    +.|...+    .|.++.. .+++.+.+.+..++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999888888999999999987765542    3342222    2444421 11233334333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.87  E-value=0.0034  Score=64.27  Aligned_cols=78  Identities=13%  Similarity=0.027  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-----CCCcE-E--EeCCccchhHHHH---HH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-----LGADY-V--VDHTIRELDRFAN---QI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-----LGAd~-v--Id~~~~~~~d~~~---~i  174 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+.    +     .|... +  .|.++.  +++.+   .+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE--EEVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH--HHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH--HHHHHHHHHH
Confidence            6889999999999999999888888999999999887765432    1     23322 1  244432  22322   33


Q ss_pred             HhcCCCeeEEEeCCC
Q psy14589        175 LSYGSELDADHPGFT  189 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG  189 (655)
                      .+..+++|+++.++|
T Consensus        95 ~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            332347999999998

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.87  E-value=0.0019  Score=62.91  Aligned_cols=95  Identities=16%  Similarity=0.089  Sum_probs=59.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      .+|+|+||+|.||..+++.+...|.+|+++++++++.+.+. .+...+ .|..+.  +++.+.+    .++|+|+.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~--~~~~~~~----~~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSL--DEVCEVC----KGADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCH--HHHHHHH----TTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCH--HHHHHHh----cCCCEEEEeCcC
Confidence            58999999999999999998889999999999877643221 122211 133321  2333333    268999999986


Q ss_pred             ch---------HHHHHHHHHHhcccc--ceEEEe
Q psy14589        191 PV---------YRARRKYFADLAFNY--KHFFFF  213 (655)
Q Consensus       191 ~~---------~~~l~~~l~~l~~gG--rlv~v~  213 (655)
                      ..         .......++.++..|  ++|.++
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S  111 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG  111 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence            41         112334455555443  666665

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.87  E-value=0.0032  Score=65.53  Aligned_cols=81  Identities=20%  Similarity=0.189  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC------------hHHHHH----HHhCCCcEE---EeCCccc-hhH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC------------PVGVAK----AYGLGADYV---VDHTIRE-LDR  169 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s------------~~k~~~----a~~LGAd~v---Id~~~~~-~~d  169 (655)
                      .|++|+|+||+||||..+++.....|++|++++++            +++++.    +++.|....   .|.++.. .+.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            78999999999999999998888889999998775            444333    234554433   2444421 112


Q ss_pred             HHHHHHhcCCCeeEEEeCCCc
Q psy14589        170 FANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       170 ~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +.+.+.+..+++|+++.++|.
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            333333333479999999884

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.87  E-value=0.0014  Score=66.30  Aligned_cols=81  Identities=16%  Similarity=0.084  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC------CCc-EE--EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL------GAD-YV--VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L------GAd-~v--Id~~~~~-~~d~~~~i~~~~  178 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+. ++      |.. .+  .|.++.. .+.+.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999877778999999999987766542 22      221 11  3444421 112223333333


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.87  E-value=0.0041  Score=64.98  Aligned_cols=81  Identities=16%  Similarity=0.066  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---------ChHHHHH----HHhCCCcEEEeCCccc-hhHHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG---------CPVGVAK----AYGLGADYVVDHTIRE-LDRFANQIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~---------s~~k~~~----a~~LGAd~vId~~~~~-~~d~~~~i~  175 (655)
                      .|.+++|+||+||||..+++.....|++|+++++         ++++.+.    +++.|...+.|..+.. ...+.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            6889999999999999999888788999998643         4444433    3455666667776542 112334444


Q ss_pred             hcCCCeeEEEeCCCc
Q psy14589        176 SYGSELDADHPGFTD  190 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~  190 (655)
                      +..+++|+++.+.|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            444589999999883

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.86  E-value=0.0027  Score=63.86  Aligned_cols=81  Identities=20%  Similarity=0.148  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCC-chHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE----EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANR-GNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV----VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasG-gVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v----Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++|+|+||+| |||..+++.....|++|+++++++++.+.+.    +.+...+    .|.++.. .+.+.+.+.+..+
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            689999999986 9999998877788999999999987765542    3332222    2444321 1123333433334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus       101 ~id~li~~Ag~  111 (266)
T 3o38_A          101 RLDVLVNNAGL  111 (266)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999984

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.86  E-value=0.0031  Score=65.11  Aligned_cols=103  Identities=11%  Similarity=0.024  Sum_probs=70.5

Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHh
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      +.....+ ++|++||-.|+ | .|..+..+++..|++|++++.+++.++.+++    .|...-++....   ++    .+
T Consensus        82 ~~~~~~~-~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~----~~  151 (318)
T 2fk8_A           82 NLDKLDL-KPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ---GW----ED  151 (318)
T ss_dssp             HHTTSCC-CTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES---CG----GG
T ss_pred             HHHhcCC-CCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC---Ch----HH
Confidence            3445566 78999999998 4 3888999999889999999999988877754    343211111111   11    11


Q ss_pred             cCCCeeEEEeC-----CCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPG-----FTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~-----vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+.+|+|+..     ++.+ ..+.++.+.++|++||++++..
T Consensus       152 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  194 (318)
T 2fk8_A          152 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  194 (318)
T ss_dssp             CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CCCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            12468999865     5432 2244788889999999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.85  E-value=0.0047  Score=62.65  Aligned_cols=78  Identities=19%  Similarity=0.078  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE---EeCCccchhHHHHHHHhc--CCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRELDRFANQILSY--GSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~~~d~~~~i~~~--~~gvDv  183 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.+. ++|....   .|.++.  +++.+.+.+.  .+++|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSE--DSVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH--HHHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCH--HHHHHHHHHHHHhCCCCe
Confidence            6889999999999999998887788999999999988876653 4554322   244432  2333333322  247899


Q ss_pred             EEeCCC
Q psy14589        184 DHPGFT  189 (655)
Q Consensus       184 V~D~vG  189 (655)
                      ++.+.+
T Consensus       107 lv~~aa  112 (281)
T 3ppi_A          107 AVVAHG  112 (281)
T ss_dssp             EEECCC
T ss_pred             EEEccC
Confidence            988733

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.84  E-value=0.0031  Score=64.06  Aligned_cols=81  Identities=16%  Similarity=0.125  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+||||..+++.....|++|+++++ ++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999998888788999998887 55444433    34454332   2444421 11233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       107 id~lv~nAg~  116 (269)
T 4dmm_A          107 LDVLVNNAGI  116 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.84  E-value=0.002  Score=65.46  Aligned_cols=81  Identities=21%  Similarity=0.205  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-------HH----HHHhCCCcEE---EeCCccc-hhHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-------VA----KAYGLGADYV---VDHTIRE-LDRFANQI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-------~~----~a~~LGAd~v---Id~~~~~-~~d~~~~i  174 (655)
                      .|++++|+||+||||..+++.....|++|+++++++++       ++    .+++.|....   .|.++.. .+.+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            68999999999999999988777889999999988643       22    2233343322   3444421 12233344


Q ss_pred             HhcCCCeeEEEeCCCc
Q psy14589        175 LSYGSELDADHPGFTD  190 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~  190 (655)
                      .+..+++|+++.++|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            4433579999999984

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.84  E-value=0.0022  Score=63.16  Aligned_cols=80  Identities=16%  Similarity=0.030  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcE-E---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADY-V---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~-v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +++|+|+||+|+||..+++.....|++|+++ ++++++.+.+    ++.|... .   .|..+.. .+++.+.+.+..++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999998888889999988 7877765543    2334432 1   2444421 11222333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.83  E-value=0.0038  Score=63.17  Aligned_cols=81  Identities=15%  Similarity=0.111  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHH----HhCCCcEE-E--eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKA----YGLGADYV-V--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a----~~LGAd~v-I--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+||||..+++.....|++|++++++ +++.+.+    ++.|.... +  |..+.. ...+.+.+.+..++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            78999999999999999888777889999999984 4433332    34554322 2  433321 11233333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999885

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.82  E-value=0.0029  Score=62.60  Aligned_cols=80  Identities=16%  Similarity=0.019  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC----CCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL----GADY-V--VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L----GAd~-v--Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      |++|+|+||+|++|..+++.....|++|+++++++++.+.+. ++    |... +  .|..+.. .+++.+.+.+..+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999887788999999999987765542 22    3321 1  2444321 112222333333479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.82  E-value=0.0042  Score=61.95  Aligned_cols=81  Identities=17%  Similarity=0.013  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC---C-------C-cEE--EeCCccc-hhHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL---G-------A-DYV--VDHTIRE-LDRFANQI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L---G-------A-d~v--Id~~~~~-~~d~~~~i  174 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+. ++   |       . -.+  .|.++.. .+++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            6789999999999999999887788999999999987766543 22   2       1 122  2444321 11222233


Q ss_pred             HhcCCCe-eEEEeCCCc
Q psy14589        175 LSYGSEL-DADHPGFTD  190 (655)
Q Consensus       175 ~~~~~gv-DvV~D~vG~  190 (655)
                      .+..+++ |+++.++|.
T Consensus        86 ~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHSSCCSEEEECCCC
T ss_pred             HHHhCCCCeEEEECCCc
Confidence            3323467 999999874

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.81  E-value=0.0012  Score=72.17  Aligned_cols=87  Identities=11%  Similarity=0.033  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|+|.|. |.||..+++.++.+|++|+++++++.+...+...|+..+         ++.+.+.    ..|+|+.+.|
T Consensus       210 ~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~---------sL~eal~----~ADVVilt~g  275 (436)
T 3h9u_A          210 AGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL---------LVEDVVE----EAHIFVTTTG  275 (436)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC---------CHHHHTT----TCSEEEECSS
T ss_pred             cCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec---------CHHHHHh----hCCEEEECCC
Confidence            7999999998 999999999999999999999999888777778886432         2333332    5799999888


Q ss_pred             cc-hHHHH-HHHHHHhccccceEEEe
Q psy14589        190 DP-VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~-~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                      .. .   + ...++.|++|+.++-++
T Consensus       276 t~~i---I~~e~l~~MK~gAIVINvg  298 (436)
T 3h9u_A          276 NDDI---ITSEHFPRMRDDAIVCNIG  298 (436)
T ss_dssp             CSCS---BCTTTGGGCCTTEEEEECS
T ss_pred             CcCc---cCHHHHhhcCCCcEEEEeC
Confidence            75 2   2 36678899987777654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.80  E-value=0.0014  Score=66.55  Aligned_cols=78  Identities=17%  Similarity=0.101  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      ..|++|||+||+||||..+++.....|++|+++++++++..   . .+..+ .|.++.. .+.+.+.+.+..+++|+++.
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~   87 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVN   87 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47999999999999999999887788999999998765431   1 22222 3544431 11233333333357999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        88 nAg~   91 (269)
T 3vtz_A           88 NAGI   91 (269)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.80  E-value=0.0058  Score=62.37  Aligned_cols=81  Identities=17%  Similarity=0.117  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhC-CCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGL-GADYV---VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~L-GAd~v---Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++++|+||+||||..+++.....|++|+++++ ++++.+.+    .+. |....   .|.++.. .+.+.+.+.+..+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            6889999999999999999888888999999988 44544433    222 33222   2443321 1223334444445


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999885

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.80  E-value=0.0047  Score=61.47  Aligned_cols=78  Identities=18%  Similarity=0.112  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHH---HHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQ---ILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~---i~~~~~  179 (655)
                      .|++|+|+||+|+||..+++.....|++|+++++++++.+.+    ++.|... +  .|.++.  +++.+.   +.+..+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT--ESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH--HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH--HHHHHHHHHHHHHcC
Confidence            688999999999999999988888899999999988765433    3335332 2  244432  233332   322234


Q ss_pred             CeeEEEeCCC
Q psy14589        180 ELDADHPGFT  189 (655)
Q Consensus       180 gvDvV~D~vG  189 (655)
                      ++|+++.++|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.79  E-value=0.0047  Score=62.20  Aligned_cols=81  Identities=14%  Similarity=0.076  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecCh---HHHHHHH-hCCCcEEE--eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCP---VGVAKAY-GLGADYVV--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~---~k~~~a~-~LGAd~vI--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|+|+||+  ||||..+++.....|++|+++++++   +..+.+. ..|...++  |.++.. .+.+.+.+.+..++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999  9999999988878899999999876   3333332 33433333  544431 11223333333458


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.78  E-value=0.0018  Score=65.79  Aligned_cols=79  Identities=16%  Similarity=0.046  Sum_probs=55.7

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--HHHHHHHhCCCcEE---EeCCccchhHHHHHHHhcCCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP--VGVAKAYGLGADYV---VDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~a~~LGAd~v---Id~~~~~~~d~~~~i~~~~~g  180 (655)
                      ++  +|++++|+||++|||.+.++.....||+|+.+++++  +..+.+++.|....   .|.+++  ++. +.+.+ .++
T Consensus         6 ~L--~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~--~~v-~~~~~-~g~   79 (247)
T 4hp8_A            6 SL--EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADP--LAA-KDSFT-DAG   79 (247)
T ss_dssp             CC--TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTST--TTT-TTSST-TTC
T ss_pred             CC--CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCH--HHH-HHHHH-hCC
Confidence            45  799999999999999999998888999999999874  34455677776543   233332  111 11111 237


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+.+++.|.
T Consensus        80 iDiLVNNAGi   89 (247)
T 4hp8_A           80 FDILVNNAGI   89 (247)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.78  E-value=0.0036  Score=68.25  Aligned_cols=88  Identities=17%  Similarity=0.181  Sum_probs=59.0

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHH----------------HHHHHhCCCcEE-E--eC
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVG----------------VAKAYGLGADYV-V--DH  162 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k----------------~~~a~~LGAd~v-I--d~  162 (655)
                      ..+.+.+.|+++||+|||+|||.++++.... .||+|++++++.++                .+.+++.|.... +  |.
T Consensus        53 ~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           53 ARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             HTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             hccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3444524688999999999999988776666 89999998876432                134566775433 2  44


Q ss_pred             Cccc-hhHHHHHHHhcC-CCeeEEEeCCCc
Q psy14589        163 TIRE-LDRFANQILSYG-SELDADHPGFTD  190 (655)
Q Consensus       163 ~~~~-~~d~~~~i~~~~-~gvDvV~D~vG~  190 (655)
                      .+.. .+.+.+.+.+.. +++|+++.++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            4321 123445555555 689999999886

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.78  E-value=0.0027  Score=66.55  Aligned_cols=81  Identities=21%  Similarity=0.227  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-----hHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-----PVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILS  176 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-----~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~  176 (655)
                      .+++|+|+||+||||..+++.....|++|++++++     +++.+.+    ++.|... +  .|.++.. .+.+.+.+.+
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999998888889999998775     3333333    2334322 2  3444421 1122333333


Q ss_pred             cCCCeeEEEeCCCc
Q psy14589        177 YGSELDADHPGFTD  190 (655)
Q Consensus       177 ~~~gvDvV~D~vG~  190 (655)
                      ..+++|+++.++|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            33479999999983

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.77  E-value=0.0035  Score=65.24  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC----------hHHHHH----HHhCCCcEEE---eCCccc-hhHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC----------PVGVAK----AYGLGADYVV---DHTIRE-LDRFA  171 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s----------~~k~~~----a~~LGAd~vI---d~~~~~-~~d~~  171 (655)
                      .|++|+|+||+||||..+++.....|++|++++++          .++.+.    +.+.|.....   |.++.. .+++.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            68899999999999999988777789999999876          333322    3445654332   333321 11223


Q ss_pred             HHHHhcCCCeeEEEeCCCc
Q psy14589        172 NQILSYGSELDADHPGFTD  190 (655)
Q Consensus       172 ~~i~~~~~gvDvV~D~vG~  190 (655)
                      +.+.+..+++|+++.++|.
T Consensus       106 ~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            3333333479999999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.76  E-value=0.0026  Score=64.85  Aligned_cols=83  Identities=14%  Similarity=0.029  Sum_probs=55.9

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcCCCe
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +..++  +|++++|+||++|||.+.++.....|++|+++++++++. ..+.+  ....|.++.. .+.+.+.+.+..+++
T Consensus         5 dl~~L--~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~i   79 (261)
T 4h15_A            5 EFLNL--RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-LPEEL--FVEADLTTKEGCAIVAEATRQRLGGV   79 (261)
T ss_dssp             CCCCC--TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-SCTTT--EEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred             hccCC--CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-CCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            34466  899999999999999999988888999999999865321 11111  1223444431 123344444445589


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |++++++|.
T Consensus        80 DilVnnAG~   88 (261)
T 4h15_A           80 DVIVHMLGG   88 (261)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.76  E-value=0.0043  Score=62.09  Aligned_cols=73  Identities=21%  Similarity=0.122  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++   ++++|...++ |. .   ++..+.+.+.. ++|+++.++
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~D~-~---~~~~~~~~~~~-~iD~lv~~A   89 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LKRSGHRYVVCDL-R---KDLDLLFEKVK-EVDILVLNA   89 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHTCSEEEECCT-T---TCHHHHHHHSC-CCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HHhhCCeEEEeeH-H---HHHHHHHHHhc-CCCEEEECC
Confidence            78999999999999999998888889999999998744   3445532332 33 1   13333333333 799999998


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus        90 g~   91 (249)
T 1o5i_A           90 GG   91 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.76  E-value=0.0039  Score=61.81  Aligned_cols=79  Identities=18%  Similarity=0.087  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccchhHHHH---HHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRELDRFAN---QILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~---~i~~~~~  179 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+    ++.|....   .|..+.  +++.+   .+.+..+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE--QELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH--HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCH--HHHHHHHHHHHHhcC
Confidence            688999999999999999988878899999999988765543    33454322   244332  22322   2222234


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.75  E-value=0.0038  Score=61.82  Aligned_cols=99  Identities=10%  Similarity=-0.054  Sum_probs=67.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc-----
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY-----  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~-----  177 (655)
                      .++++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++    .|.+.-+.....   +..+.+.+.     
T Consensus        59 ~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~---d~~~~~~~~~~~~~  133 (239)
T 2hnk_A           59 SGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG---SALETLQVLIDSKS  133 (239)
T ss_dssp             HTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES---CHHHHHHHHHHCSS
T ss_pred             hCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC---CHHHHHHHHHhhcc
Confidence            46789999997  4688999999987  5799999999988777654    465321111111   222222211     


Q ss_pred             ----------C-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        178 ----------G-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ----------~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                                . +.+|+|+...+.. ..+.++.+.+.|++||++++.
T Consensus       134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence                      1 4799998776554 224478889999999999875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.75  E-value=0.0031  Score=62.03  Aligned_cols=81  Identities=20%  Similarity=0.184  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHhC-CCc-EE--EeCCccc-hhHHHHHHHhcCC--C
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYGL-GAD-YV--VDHTIRE-LDRFANQILSYGS--E  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~L-GAd-~v--Id~~~~~-~~d~~~~i~~~~~--g  180 (655)
                      .+.+|+|+||+|+||..+++.....|  ++|+++++++++.+.+.++ +.. .+  .|.++.. .+++.+.+.+..+  +
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            46789999999999999998888889  9999999998887777665 322 22  3444321 1122333333223  6


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999998873

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.75  E-value=0.0053  Score=62.31  Aligned_cols=81  Identities=23%  Similarity=0.179  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-------------ChHHHHHH----HhCCCcEE---EeCCccc-hh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-------------CPVGVAKA----YGLGADYV---VDHTIRE-LD  168 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-------------s~~k~~~a----~~LGAd~v---Id~~~~~-~~  168 (655)
                      .|++++|+||+||||..+++.....|++|+++++             ++++.+.+    .+.|....   .|.++.. ..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            7899999999999999999888888999999987             45544433    33454322   2444321 11


Q ss_pred             HHHHHHHhcCCCeeEEEeCCCc
Q psy14589        169 RFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       169 d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      .+.+.+.+..+++|+++.++|.
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            2233333333479999999875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.75  E-value=0.0049  Score=61.67  Aligned_cols=77  Identities=17%  Similarity=0.114  Sum_probs=54.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcE-E--EeCCccchhHHHHHHHhc---CCCeeEE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADY-V--VDHTIRELDRFANQILSY---GSELDAD  184 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~-v--Id~~~~~~~d~~~~i~~~---~~gvDvV  184 (655)
                      ++++|+||+||||..+++.....|++|+++++++++.+.+. +++... .  .|.++.  +++.+.+.+.   .+++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNR--AAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH--HHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCH--HHHHHHHHHHHHhCCCCCEE
Confidence            36899999999999999888888999999999988776553 344321 2  244432  2344444433   2379999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        79 vnnAg~   84 (248)
T 3asu_A           79 VNNAGL   84 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.75  E-value=0.005  Score=63.12  Aligned_cols=42  Identities=14%  Similarity=0.086  Sum_probs=36.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA  151 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a  151 (655)
                      .|.+++|+||+||||..+++.....|++|++++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence            678999999999999999988888899999999 888766544

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.75  E-value=0.0026  Score=63.58  Aligned_cols=77  Identities=16%  Similarity=0.066  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++++|+||+||||..+++.....|++|++++++++.    .+.|+..+ .|.++.. .+.+.+.+.+..+++|+++.+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~   81 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNA   81 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            67899999999999999998888889999999987652    23453222 3444421 112233333334579999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        82 Ag~   84 (250)
T 2fwm_X           82 AGI   84 (250)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            884

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.74  E-value=0.0051  Score=60.31  Aligned_cols=75  Identities=21%  Similarity=0.107  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      ..+.+|+|+||+|+||..+++.+...  |.+|+++++++++.+.+ ..++..+ .|..+.  +++.+.+    .++|+|+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~--~~~~~~~----~~~d~vi   74 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDA--DSINPAF----QGIDALV   74 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSH--HHHHHHH----TTCSEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCH--HHHHHHH----cCCCEEE
Confidence            35789999999999999999888877  78999999988766443 2233332 244332  2333333    2689999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus        75 ~~a~~   79 (253)
T 1xq6_A           75 ILTSA   79 (253)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            98874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.72  E-value=0.0026  Score=63.82  Aligned_cols=79  Identities=15%  Similarity=-0.016  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV---VDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|++++|+||+||||..+++.....|++|++++++.++  .+.++|....   .|.++.. .+.+.+.+.+ .+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVADLGDRARFAAADVTDEAAVASALDLAET-MGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEE
Confidence            68899999999999999888777789999999886543  3445554322   2444321 1123333333 34799999


Q ss_pred             eCCCcc
Q psy14589        186 PGFTDP  191 (655)
Q Consensus       186 D~vG~~  191 (655)
                      .++|..
T Consensus        85 ~nAg~~   90 (257)
T 3tl3_A           85 NCAGTG   90 (257)
T ss_dssp             ECGGGS
T ss_pred             ECCCCC
Confidence            999853

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.72  E-value=0.0014  Score=64.64  Aligned_cols=96  Identities=15%  Similarity=-0.013  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhc--C
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSY--G  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~--~  178 (655)
                      .++++||-.|+ | .|..++.+|+.. +.+|++++.+++..+.+++    .|..   .++. .+     ..+.+...  .
T Consensus        53 ~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~-~d-----~~~~~~~~~~~  124 (233)
T 2gpy_A           53 AAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLF-GD-----ALQLGEKLELY  124 (233)
T ss_dssp             HCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC-SC-----GGGSHHHHTTS
T ss_pred             cCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE-CC-----HHHHHHhcccC
Confidence            46789999998 3 788899999988 6799999999988877754    4642   2222 21     11112222  2


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+|+|+...+.. ..+.++.+.+.|++||++++.
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            4799998665543 223478888999999998875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.69  E-value=0.0046  Score=62.96  Aligned_cols=80  Identities=19%  Similarity=0.014  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hCCCcEE---EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GLGADYV---VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      .|++++|+||+||||..+++.....|++|+++++++...+.+.   +.|....   .|..+.. .+.+.+.+.+. +++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT-RRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc-CCCc
Confidence            7899999999999999999887788999999987654333333   3443322   2444321 11222223222 4799


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.68  E-value=0.0053  Score=62.51  Aligned_cols=91  Identities=13%  Similarity=0.090  Sum_probs=59.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-------HHHHHH---HhCCCcEE-EeCCccchhHHHHHHHhcCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-------VGVAKA---YGLGADYV-VDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-------~k~~~a---~~LGAd~v-Id~~~~~~~d~~~~i~~~~~  179 (655)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++       ++.+.+   ...|+..+ .|..+.  +++.+.+    .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~--~~l~~~~----~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH--ETLVKAI----K   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH--HHHHHHH----T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH--HHHHHHH----h
Confidence            46799999999999999987777899999999876       554433   34566544 244432  2333333    2


Q ss_pred             CeeEEEeCCCcchHHHHHHHHHHhcccc
Q psy14589        180 ELDADHPGFTDPVYRARRKYFADLAFNY  207 (655)
Q Consensus       180 gvDvV~D~vG~~~~~~l~~~l~~l~~gG  207 (655)
                      ++|+|+.++|..........+++++..|
T Consensus        76 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g  103 (307)
T 2gas_A           76 QVDIVICAAGRLLIEDQVKIIKAIKEAG  103 (307)
T ss_dssp             TCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred             CCCEEEECCcccccccHHHHHHHHHhcC
Confidence            6999999998641111344555555444

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.68  E-value=0.022  Score=50.69  Aligned_cols=95  Identities=12%  Similarity=-0.103  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE-eCCccchhHHHHHHHhc-CCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV-DHTIRELDRFANQILSY-GSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI-d~~~~~~~d~~~~i~~~-~~gvDvV~D  186 (655)
                      .+.+|+|.|+ |.+|...++..+..|.+|+++++++++.+.++ +.|...+. |..+.      +.+.+. ..++|+|+-
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~------~~l~~~~~~~~d~vi~   75 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI------KTLEDAGIEDADMYIA   75 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH------HHHHHTTTTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCH------HHHHHcCcccCCEEEE
Confidence            3568999998 99999999888888999999999988887765 45764332 22221      122222 237899999


Q ss_pred             CCCcch-HHHHHHHHHHhccccceEEE
Q psy14589        187 GFTDPV-YRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       187 ~vG~~~-~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +++... ...+....+.+++ ++++..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~-~~ii~~  101 (140)
T 1lss_A           76 VTGKEEVNLMSSLLAKSYGI-NKTIAR  101 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred             eeCCchHHHHHHHHHHHcCC-CEEEEE
Confidence            998763 1122333444444 465543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.66  E-value=0.0042  Score=62.48  Aligned_cols=95  Identities=14%  Similarity=-0.039  Sum_probs=59.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +|+|+||+|.||..+++.+...  |.+|+++++++++.+.+...++..+. |..+.      +.+.+.-.++|+|+.++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDE------AALTSALQGVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCH------HHHHHHTTTCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCH------HHHHHHHhCCCEEEEeCC
Confidence            4899999999999999877777  89999999988776666556665432 43332      223333336899999987


Q ss_pred             cch---HHHHHHHHHHhccc--cceEEEe
Q psy14589        190 DPV---YRARRKYFADLAFN--YKHFFFF  213 (655)
Q Consensus       190 ~~~---~~~l~~~l~~l~~g--Grlv~v~  213 (655)
                      ...   .......++.++..  +++|.++
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~S  103 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTS  103 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEE
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            520   01133444444433  4666654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.66  E-value=0.003  Score=63.90  Aligned_cols=76  Identities=16%  Similarity=0.055  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|.+|+|+||+||||..+++.....|++|+++++++++     ...+..+ .|.++.. .+.+.+.+.+..+++|+++.+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~   81 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNN   81 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999998888889999999987654     1122222 3444421 112223333333479999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        82 Ag~   84 (264)
T 2dtx_A           82 AGI   84 (264)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            884

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.65  E-value=0.0043  Score=61.92  Aligned_cols=81  Identities=14%  Similarity=0.091  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecCh--HHHHHHHhC--CCc-EE--EeCCcc-c-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCP--VGVAKAYGL--GAD-YV--VDHTIR-E-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~--~k~~~a~~L--GAd-~v--Id~~~~-~-~~d~~~~i~~~~~  179 (655)
                      .|++|+|+||+||||..+++.....|++ |+++++++  +..+.+.+.  |.. .+  .|.++. . ..++.+.+.+..+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            5789999999999999999888888996 88888875  334444332  222 11  244432 1 1122333333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999984

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.64  E-value=0.006  Score=61.11  Aligned_cols=81  Identities=15%  Similarity=0.246  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcC-CC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYG-SE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~-~g  180 (655)
                      .|.+|+|+||+|+||..+++.....|++|+++++++++.+.+    ++.|....   .|..+.. ...+.+.+.+.. ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            688999999999999999988888899999999988766543    23454322   2433321 012222232222 57


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999998874

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.63  E-value=0.0045  Score=63.45  Aligned_cols=103  Identities=13%  Similarity=0.023  Sum_probs=69.8

Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHh
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      +.....+ ++|++||-.|+  |.|..+..+++..|++|++++.+++.++.+++    .|...-+.....   |+.    +
T Consensus        64 ~~~~~~~-~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~----~  133 (302)
T 3hem_A           64 ALDKLNL-EPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ---GWE----E  133 (302)
T ss_dssp             HHHTTCC-CTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC---CGG----G
T ss_pred             HHHHcCC-CCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC---CHH----H
Confidence            3344566 79999999998  45889999999989999999999988777753    453311111111   111    1


Q ss_pred             cCCCeeEEEeCC------------Ccc-hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPGF------------TDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~v------------G~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+.+|+|+-..            |.. ....++.+.++|++||++++..
T Consensus       134 ~~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  183 (302)
T 3hem_A          134 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  183 (302)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred             cCCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence            134789987532            212 1244788889999999999875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.63  E-value=0.0054  Score=64.22  Aligned_cols=42  Identities=14%  Similarity=0.086  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA  151 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a  151 (655)
                      .|.+++|+||+||||..+++.....|++|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            678999999999999999988888899999999 888766554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.62  E-value=0.0013  Score=64.95  Aligned_cols=71  Identities=18%  Similarity=0.080  Sum_probs=46.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      ++|+|+||+|+||..+++.....|++|+++++++++.+.      ....|..+.  +++.+.+.+..+++|+|+.++|.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~D~~~~--~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------DLSTPGGRE--TAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------CTTSHHHHH--HHHHHHHHHHTTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------cccCCcccH--HHHHHHHHHcCCCccEEEECCCC
Confidence            379999999999999998777789999999987654311      100111111  12233333332479999998874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.62  E-value=0.0063  Score=60.95  Aligned_cols=81  Identities=15%  Similarity=0.083  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH---cCCeEEEEecChHHHHHHH-hC-----CCcE-E--EeCCccc-hhHHHHHHHh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKA---YGLTVFASVGCPVGVAKAY-GL-----GADY-V--VDHTIRE-LDRFANQILS  176 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~---~Ga~Viat~~s~~k~~~a~-~L-----GAd~-v--Id~~~~~-~~d~~~~i~~  176 (655)
                      +|++++|+||+||||..+++....   .|++|+++++++++.+.+. ++     |... +  .|.++.. .+.+.+.+.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            688999999999999988876665   7999999999987765543 22     4321 1  3444421 1123333433


Q ss_pred             --cCCCee--EEEeCCCc
Q psy14589        177 --YGSELD--ADHPGFTD  190 (655)
Q Consensus       177 --~~~gvD--vV~D~vG~  190 (655)
                        ..+++|  +++.++|.
T Consensus        85 ~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             ccccccCCccEEEECCcc
Confidence              223567  99998873

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.62  E-value=0.0061  Score=62.05  Aligned_cols=77  Identities=18%  Similarity=0.072  Sum_probs=54.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC---CcEE--EeCCccchhHHHHHHHhc---CCCee
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG---ADYV--VDHTIRELDRFANQILSY---GSELD  182 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG---Ad~v--Id~~~~~~~d~~~~i~~~---~~gvD  182 (655)
                      ++++|+||+||||..+++.....|++|+++++++++.+.+. ++.   --.+  .|.++.  +++.+.+.+.   .+++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDR--AAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCH--HHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCH--HHHHHHHHHHHHHhCCCC
Confidence            78999999999999999888888999999999988776543 232   1122  244432  2344444433   24789


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.61  E-value=0.0039  Score=61.76  Aligned_cols=79  Identities=16%  Similarity=0.175  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHH----HhCCCcE-E--EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKA----YGLGADY-V--VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~  178 (655)
                      .|.+|+|+||+|+||..+++.....|++|++++++ +++.+.+    ++.|... +  .|..+.  +++.+   .+.+..
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS--EACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSH--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCH--HHHHHHHHHHHHHc
Confidence            57899999999999999998877889999999988 6555433    2334321 1  244432  23333   333323


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999885

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.61  E-value=0.014  Score=60.70  Aligned_cols=75  Identities=12%  Similarity=-0.030  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHHHHhC-------CCcEE-EeCCccchhHHHHHHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAKAYGL-------GADYV-VDHTIRELDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~a~~L-------GAd~v-Id~~~~~~~d~~~~i~~~  177 (655)
                      .+.+|||+||+|.||..+++.+...|.+|++++++.    +..+.++..       +...+ .|..+.      +.+.+.
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~   97 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL------TTCEQV   97 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH------HHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH------HHHHHH
Confidence            467899999999999999998888999999999854    333444432       22222 233321      223333


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      -.++|+|+.++|.
T Consensus        98 ~~~~d~Vih~A~~  110 (351)
T 3ruf_A           98 MKGVDHVLHQAAL  110 (351)
T ss_dssp             TTTCSEEEECCCC
T ss_pred             hcCCCEEEECCcc
Confidence            3379999999985

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.61  E-value=0.0061  Score=60.71  Aligned_cols=81  Identities=19%  Similarity=0.160  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH-HH----hCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK-AY----GLGADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-a~----~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|.+|+|+||+|+||..+++.....|++|++++++.++.+. +.    +.|... +  .|..+.. .+.+.+.+.+..++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            67899999999999999998877789999999986543322 22    224332 1  2444321 11223333333457


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.60  E-value=0.0017  Score=64.34  Aligned_cols=97  Identities=13%  Similarity=0.071  Sum_probs=67.0

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCe
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .+ ++|++||..|+ | .|..+..+++..+.+|++++.+++..+.+++    .|.+.+ .....   +....... ..++
T Consensus        88 ~~-~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~---d~~~~~~~-~~~f  159 (235)
T 1jg1_A           88 NL-KPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILG---DGSKGFPP-KAPY  159 (235)
T ss_dssp             TC-CTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES---CGGGCCGG-GCCE
T ss_pred             CC-CCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEC---CcccCCCC-CCCc
Confidence            34 68899999998 4 7889999999877899999999988777754    554332 11111   11000111 1259


Q ss_pred             eEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+|+.+.+-. .   .+.+.+.|++||++++..
T Consensus       160 D~Ii~~~~~~~~---~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          160 DVIIVTAGAPKI---PEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             EEEEECSBBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred             cEEEECCcHHHH---HHHHHHhcCCCcEEEEEE
Confidence            9999776655 4   467888999999998864

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.60  E-value=0.006  Score=60.17  Aligned_cols=80  Identities=19%  Similarity=0.108  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC-------eEEEEecChHHHHHHH----hCCCcE-E--EeCCccc-hhHHHHHHH
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGL-------TVFASVGCPVGVAKAY----GLGADY-V--VDHTIRE-LDRFANQIL  175 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga-------~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~-~~d~~~~i~  175 (655)
                      |++|+|+||+|+||..+++.....|+       +|+++++++++.+.+.    +.|... +  .|..+.. .+.+.+.+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            67899999999999998887777899       9999999887765543    234321 1  2444321 112233333


Q ss_pred             hcCCCeeEEEeCCCc
Q psy14589        176 SYGSELDADHPGFTD  190 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~  190 (655)
                      +..+++|+++.++|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence            334579999999874

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.59  E-value=0.0068  Score=61.69  Aligned_cols=91  Identities=12%  Similarity=0.049  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC------hHHHHHH---HhCCCcEE-EeCCccchhHHHHHHHhcCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC------PVGVAKA---YGLGADYV-VDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s------~~k~~~a---~~LGAd~v-Id~~~~~~~d~~~~i~~~~~g  180 (655)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++      +++.+.+   ...|+..+ .|..+.  +++.+.+.    +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~--~~l~~~~~----~   77 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH--ASLVEAVK----N   77 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCH--HHHHHHHH----T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCH--HHHHHHHc----C
Confidence            4679999999999999998888889999999887      3344333   34566543 244432  23444443    6


Q ss_pred             eeEEEeCCCcchHHHHHHHHHHhcccc
Q psy14589        181 LDADHPGFTDPVYRARRKYFADLAFNY  207 (655)
Q Consensus       181 vDvV~D~vG~~~~~~l~~~l~~l~~gG  207 (655)
                      +|+|+.++|..........+++++..|
T Consensus        78 ~d~vi~~a~~~~~~~~~~l~~aa~~~g  104 (308)
T 1qyc_A           78 VDVVISTVGSLQIESQVNIIKAIKEVG  104 (308)
T ss_dssp             CSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred             CCEEEECCcchhhhhHHHHHHHHHhcC
Confidence            899999998641011234445444444

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.59  E-value=0.0067  Score=61.29  Aligned_cols=82  Identities=15%  Similarity=0.105  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      ..+.+|+|+||+||||..+++.....|++|+++ .+++++.+.+    .+.|....   .|..+.. .+++.+.+.+..+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            467899999999999999998888889999776 6666655443    33454322   2444321 1123333333334


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus       104 ~id~li~nAg~  114 (272)
T 4e3z_A          104 RLDGLVNNAGI  114 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.59  E-value=0.0018  Score=62.63  Aligned_cols=97  Identities=18%  Similarity=0.013  Sum_probs=66.9

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      .+ ++|++||..|+ | .|..+..+++..|  .+|++++.+++..+.+++    .|.+.+ .....   +...... ..+
T Consensus        74 ~~-~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~---d~~~~~~-~~~  145 (215)
T 2yxe_A           74 DL-KPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVG---DGTLGYE-PLA  145 (215)
T ss_dssp             TC-CTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEES---CGGGCCG-GGC
T ss_pred             CC-CCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC---CcccCCC-CCC
Confidence            45 68999999998 4 6889999999887  799999999988777754    343322 11111   1111111 123


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+|+|+.+.+-. .   .+.+.+.|++||++++..
T Consensus       146 ~fD~v~~~~~~~~~---~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          146 PYDRIYTTAAGPKI---PEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             CEEEEEESSBBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred             CeeEEEECCchHHH---HHHHHHHcCCCcEEEEEE
Confidence            699999876655 3   467889999999998864

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.59  E-value=0.0063  Score=59.93  Aligned_cols=80  Identities=14%  Similarity=0.133  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      |++|+|+||+|+||..+++.....|++|+++ ++++++.+.+    ++.|....   .|.++.. .+.+.+.+.+..+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999998888889999884 7777665443    22343221   2444321 112223333334479


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.58  E-value=0.0067  Score=62.31  Aligned_cols=79  Identities=15%  Similarity=0.065  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC---eEEEEecChHHHHHHHh-C-----CCcEE---EeCCccchhHHHHHHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL---TVFASVGCPVGVAKAYG-L-----GADYV---VDHTIRELDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga---~Viat~~s~~k~~~a~~-L-----GAd~v---Id~~~~~~~d~~~~i~~~  177 (655)
                      .|++++|+||+||||..+++.....|+   +|+.+++++++.+.+.+ +     |....   .|.++.  +++.+.+.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~--~~v~~~~~~~  109 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQA--EKIKPFIENL  109 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCG--GGHHHHHHTS
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH--HHHHHHHHHH
Confidence            578999999999999988876555666   99999999887766532 1     33221   244443  2444444443


Q ss_pred             ---CCCeeEEEeCCCc
Q psy14589        178 ---GSELDADHPGFTD  190 (655)
Q Consensus       178 ---~~gvDvV~D~vG~  190 (655)
                         .+++|+++.++|.
T Consensus       110 ~~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          110 PQEFKDIDILVNNAGK  125 (287)
T ss_dssp             CGGGCSCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence               2479999999883

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.57  E-value=0.0067  Score=61.70  Aligned_cols=81  Identities=12%  Similarity=0.034  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecCh--HHHHHHHh-CCCcEEE--eCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCP--VGVAKAYG-LGADYVV--DHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~--~k~~~a~~-LGAd~vI--d~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++|+|+||+  +|||..+++.....|++|+++++++  ++.+.+.+ .+.-.++  |.++.. .+++.+.+.+..+++
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            68899999998  6799998887778899999999887  55555543 3333333  444321 123344444444589


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus       105 d~li~nAg~  113 (280)
T 3nrc_A          105 DAIVHSIAF  113 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999885

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.57  E-value=0.0085  Score=64.88  Aligned_cols=88  Identities=20%  Similarity=0.148  Sum_probs=57.3

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHH----------------HHHHHhCCCcEE-E--eCC
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVG----------------VAKAYGLGADYV-V--DHT  163 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k----------------~~~a~~LGAd~v-I--d~~  163 (655)
                      .+.+...|++++|+|||+|||.++++.... .||+|++++++.++                .+.+++.|.... +  |..
T Consensus        40 ~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           40 EGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             HCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            344435688899999999999988776666 89999988765432                123456665432 2  444


Q ss_pred             ccc-hhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        164 IRE-LDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       164 ~~~-~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +.. .+.+.+.+.+.-+++|+++.++|..
T Consensus       120 d~~~v~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             SHHHHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence            321 1233444444456899999998863

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.56  E-value=0.0037  Score=60.13  Aligned_cols=98  Identities=12%  Similarity=-0.015  Sum_probs=67.5

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh----CCCc--EEEeCCccchhHHHHHHHhcC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG----LGAD--YVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~----LGAd--~vId~~~~~~~d~~~~i~~~~  178 (655)
                      .+ ++|++||-.|+ | .|..++.+++.. +.+|++++.+++.++.+++    .|.+  .++....      .+.+.. .
T Consensus        37 ~~-~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~------~~~~~~-~  106 (204)
T 3e05_A           37 RL-QDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA------PEGLDD-L  106 (204)
T ss_dssp             TC-CTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT------TTTCTT-S
T ss_pred             CC-CCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh------hhhhhc-C
Confidence            45 68999999998 4 588999999886 3699999999988877754    3443  2232211      111111 1


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+|+|+...... ..+.++.+.+.|++||++++..
T Consensus       107 ~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          107 PDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             CCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            3689998765432 2244889999999999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.56  E-value=0.0066  Score=61.15  Aligned_cols=95  Identities=9%  Similarity=-0.133  Sum_probs=61.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +|+|+||+|.+|..+++.+...  |.+|+++++++++.+.+...++..+. |..+.      +.+.+.-.++|+|+.++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQP------ESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCH------HHHHHHTTTCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCH------HHHHHHHhcCCEEEEcCC
Confidence            6999999999999999877777  89999999988776666666665432 43332      223333336899999988


Q ss_pred             cch-----HHHHHHHHHHhcccc--ceEEEe
Q psy14589        190 DPV-----YRARRKYFADLAFNY--KHFFFF  213 (655)
Q Consensus       190 ~~~-----~~~l~~~l~~l~~gG--rlv~v~  213 (655)
                      ...     .......+++++..|  ++|.++
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~S  106 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTG  106 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            521     011234444444433  666655

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.55  E-value=0.0082  Score=62.62  Aligned_cols=93  Identities=10%  Similarity=-0.082  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHHH---HhCCCcEE-EeCCccchhHHHHHHHhcCCCee
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAKA---YGLGADYV-VDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~a---~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      ..+|+|+||+|.+|..+++.+...|.+|+++++++    ++.+.+   ...|+..+ .|..+.  +++.+.+.+.  ++|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~--~~l~~~~~~~--~~d   85 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ--EAMEKILKEH--EID   85 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCH--HHHHHHHHHT--TCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCH--HHHHHHHhhC--CCC
Confidence            45799999999999999998888899999999876    454433   34566554 244332  2444444432  689


Q ss_pred             EEEeCCCcchHHHHHHHHHHhcccc
Q psy14589        183 ADHPGFTDPVYRARRKYFADLAFNY  207 (655)
Q Consensus       183 vV~D~vG~~~~~~l~~~l~~l~~gG  207 (655)
                      +|+.++|..........+++++..|
T Consensus        86 ~Vi~~a~~~n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           86 IVVSTVGGESILDQIALVKAMKAVG  110 (346)
T ss_dssp             EEEECCCGGGGGGHHHHHHHHHHHC
T ss_pred             EEEECCchhhHHHHHHHHHHHHHcC
Confidence            9999998752111345566666555

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.55  E-value=0.009  Score=59.03  Aligned_cols=99  Identities=9%  Similarity=-0.044  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCc-EEEeCCccchhHHHHHHHhc-CCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGAD-YVVDHTIRELDRFANQILSY-GSE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd-~vId~~~~~~~d~~~~i~~~-~~g  180 (655)
                      +++.+||-.|+  |.|..++.+|+++  +++|++++.+++..+.++    +.|.. .-|.....   +..+.+... .+.
T Consensus        55 ~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g---da~~~l~~~~~~~  129 (221)
T 3dr5_A           55 NGSTGAIAITP--AAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS---RPLDVMSRLANDS  129 (221)
T ss_dssp             TTCCEEEEEST--THHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS---CHHHHGGGSCTTC
T ss_pred             CCCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc---CHHHHHHHhcCCC
Confidence            45669998887  7788899999986  679999999998877764    35654 11221111   233333333 347


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+|+-..... ..+.++.+.+.|++||.+++-
T Consensus       130 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          130 YQLVFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             EEEEEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             cCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            99997554433 223478899999999998863

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.54  E-value=0.0025  Score=64.20  Aligned_cols=76  Identities=17%  Similarity=0.063  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++|+|+||+||||..+++.....|++|+++++++++.+.     +.. ..|.++.. .+.+.+.+.+..+++|+++.+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            57899999999999999998888889999999987655432     211 13444431 112233333334579999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        95 Ag~   97 (253)
T 2nm0_A           95 AGV   97 (253)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.54  E-value=0.00085  Score=68.16  Aligned_cols=77  Identities=21%  Similarity=0.136  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|++|+|+||+||||..+++.....|++|++++++.++.+....+    ..|..+.. .+.+.+.+.+..+++|+++.++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnA  102 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGLGRLDIVVNNA  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            688999999999999999988778899999998876543221111    12333321 1123333333334799999998


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus       103 g~  104 (266)
T 3uxy_A          103 GV  104 (266)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.54  E-value=0.0056  Score=58.55  Aligned_cols=64  Identities=20%  Similarity=0.112  Sum_probs=47.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +|+|+||+|++|..+++... .|++|++++++++          ....|..+.  +++.+.+.+. +++|+++.++|.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------~~~~D~~~~--~~~~~~~~~~-~~~d~vi~~ag~   68 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------DVTVDITNI--DSIKKMYEQV-GKVDAIVSATGS   68 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------SEECCTTCH--HHHHHHHHHH-CCEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------ceeeecCCH--HHHHHHHHHh-CCCCEEEECCCC
Confidence            79999999999999998777 8999999988754          233455543  2344444443 469999999873

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.53  E-value=0.0044  Score=61.49  Aligned_cols=99  Identities=12%  Similarity=0.077  Sum_probs=68.7

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHhC-----CCcEEEeCCccchhHHHHHHHhc
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYGL-----GADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~L-----GAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ..+ ++|++||..|+ | .|..++.+++..  +.+|++++.+++..+.+++.     |.+.+ .....   |+.+.  ..
T Consensus        92 ~~~-~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~---d~~~~--~~  162 (258)
T 2pwy_A           92 LDL-APGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG---KLEEA--EL  162 (258)
T ss_dssp             TTC-CTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES---CGGGC--CC
T ss_pred             cCC-CCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC---chhhc--CC
Confidence            345 78999999998 4 488999999986  56999999999888887653     64332 11111   11111  11


Q ss_pred             C-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        178 G-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      . +.+|+|+-..+.. .+.++.+.++|++||+++++.
T Consensus       163 ~~~~~D~v~~~~~~~-~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          163 EEAAYDGVALDLMEP-WKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             CTTCEEEEEEESSCG-GGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCcCEEEECCcCH-HHHHHHHHHhCCCCCEEEEEe
Confidence            1 3699998766544 123889999999999999875

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.52  E-value=0.011  Score=60.49  Aligned_cols=75  Identities=5%  Similarity=-0.104  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC----CCc-EEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL----GAD-YVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L----GAd-~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      +|++++|+||+||+|.++++.....|++|+++++++++.+.+. ++    ++. ...|..+.  ++    +.+.-..+|+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~--~~----~~~~~~~~Dv  191 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD--AS----RAEAVKGAHF  191 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH--HH----HHHHTTTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH--HH----HHHHHHhCCE
Confidence            7899999999999999999888889999999999887765442 22    322 23455442  12    2222235899


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus       192 lVn~ag~  198 (287)
T 1lu9_A          192 VFTAGAI  198 (287)
T ss_dssp             EEECCCT
T ss_pred             EEECCCc
Confidence            9999974

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.52  E-value=0.0035  Score=62.16  Aligned_cols=98  Identities=13%  Similarity=-0.010  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc---C--
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY---G--  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~---~--  178 (655)
                      ++++||-.|+  |.|..++.+|+.+  +.+|++++.+++..+.+++    .|...-++....   +..+.+.+.   .  
T Consensus        72 ~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~---d~~~~l~~l~~~~~~  146 (232)
T 3cbg_A           72 GAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG---PALATLEQLTQGKPL  146 (232)
T ss_dssp             TCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES---CHHHHHHHHHTSSSC
T ss_pred             CCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc---CHHHHHHHHHhcCCC
Confidence            5678999997  4888999999987  5699999999988777754    354321221111   222222222   2  


Q ss_pred             CCeeEEEeCCC-cchHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFT-DPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG-~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+|+|+-... ....+.++.+.+.|++||++++-
T Consensus       147 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~  181 (232)
T 3cbg_A          147 PEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID  181 (232)
T ss_dssp             CCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence            47999984333 33324478899999999998875

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.51  E-value=0.0022  Score=61.82  Aligned_cols=94  Identities=11%  Similarity=-0.065  Sum_probs=65.7

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcE--EEeCCccchhHHHHHHHhcCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADY--VVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~--vId~~~~~~~d~~~~i~~~~~  179 (655)
                      .+ ++|++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++    .|.+.  ++...      ..+... ..+
T Consensus        74 ~~-~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~~~~-~~~  142 (210)
T 3lbf_A           74 EL-TPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD------GWQGWQ-ARA  142 (210)
T ss_dssp             TC-CTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------GGGCCG-GGC
T ss_pred             CC-CCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECC------cccCCc-cCC
Confidence            45 68999999998 3 58888889988 8899999999988877753    45432  22211      111111 123


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+|+|+...+-. .   .+.+.+.|++||++++..
T Consensus       143 ~~D~i~~~~~~~~~---~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          143 PFDAIIVTAAPPEI---PTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             CEEEEEESSBCSSC---CTHHHHTEEEEEEEEEEE
T ss_pred             CccEEEEccchhhh---hHHHHHhcccCcEEEEEE
Confidence            799999765544 3   357788999999998864

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.51  E-value=0.016  Score=58.24  Aligned_cols=102  Identities=11%  Similarity=0.016  Sum_probs=67.6

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHh----CC-CcEEEeCCccchhHHHHHHH
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYG----LG-ADYVVDHTIRELDRFANQIL  175 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~----LG-Ad~vId~~~~~~~d~~~~i~  175 (655)
                      +...+ ++|++||=.|+  |.|..+..+|+..|.  +|++++.+++..+.+++    .+ .+.|......     .....
T Consensus        71 ~~l~i-kpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~-----p~~~~  142 (233)
T 4df3_A           71 IELPV-KEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARF-----PEKYR  142 (233)
T ss_dssp             SCCCC-CTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTC-----GGGGT
T ss_pred             hhcCC-CCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccC-----ccccc
Confidence            34567 89999999998  567788999999875  89999999988777653    22 2223221111     00111


Q ss_pred             hcCCCeeEEEeCCCcc--hHHHHHHHHHHhccccceEEE
Q psy14589        176 SYGSELDADHPGFTDP--VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .....+|+|+-.+..+  ....+..+.+.|++||+++++
T Consensus       143 ~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          143 HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            1123689888655544  113366777899999999875

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.50  E-value=0.0064  Score=62.47  Aligned_cols=91  Identities=9%  Similarity=0.133  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh------HHHHHH---HhCCCcEE-EeCCccchhHHHHHHHhcCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP------VGVAKA---YGLGADYV-VDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~------~k~~~a---~~LGAd~v-Id~~~~~~~d~~~~i~~~~~g  180 (655)
                      ..+|+|+||+|.+|..+++.....|.+|+++++++      ++.+.+   ...|+..+ .|..+.  +++.+.+    .+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~--~~l~~a~----~~   77 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH--EKMVSVL----KQ   77 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCH--HHHHHHH----TT
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCH--HHHHHHH----cC
Confidence            46799999999999999988878899999999875      343333   34566544 244432  2333333    26


Q ss_pred             eeEEEeCCCcchHHHHHHHHHHhcccc
Q psy14589        181 LDADHPGFTDPVYRARRKYFADLAFNY  207 (655)
Q Consensus       181 vDvV~D~vG~~~~~~l~~~l~~l~~gG  207 (655)
                      +|+|+.++|..........+++++..|
T Consensus        78 ~d~vi~~a~~~~~~~~~~l~~aa~~~g  104 (321)
T 3c1o_A           78 VDIVISALPFPMISSQIHIINAIKAAG  104 (321)
T ss_dssp             CSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred             CCEEEECCCccchhhHHHHHHHHHHhC
Confidence            899999998541011344555555444

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.48  E-value=0.0036  Score=62.36  Aligned_cols=100  Identities=13%  Similarity=0.002  Sum_probs=68.5

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ..+ ++|++||-.|+ | .|.++..+++..  +.+|++++.+++..+.+++    .|.+.-++....   |+.+..  ..
T Consensus        89 ~~~-~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~--~~  160 (255)
T 3mb5_A           89 AGI-SPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK---DIYEGI--EE  160 (255)
T ss_dssp             TTC-CTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS---CGGGCC--CC
T ss_pred             hCC-CCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC---chhhcc--CC
Confidence            355 78999999998 3 488999999985  5699999999988877754    354321111111   121111  12


Q ss_pred             CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+|+|+-..+.. +..++.+.++|++||+++++.
T Consensus       161 ~~~D~v~~~~~~~-~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          161 ENVDHVILDLPQP-ERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CSEEEEEECSSCG-GGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCcCEEEECCCCH-HHHHHHHHHHcCCCCEEEEEE
Confidence            2699999877655 123899999999999998864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.48  E-value=0.0033  Score=59.80  Aligned_cols=74  Identities=18%  Similarity=0.078  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +.+|+|+||+|++|..+++.+...|.+|+++++++++.+.....+...+ .|..+.  +++.+.+    .++|+|+.++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~----~~~d~vi~~a~   76 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQA--ADVDKTV----AGQDAVIVLLG   76 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSH--HHHHHHH----TTCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCH--HHHHHHH----cCCCEEEECcc
Confidence            3689999999999999999888889999999998776432212233322 233321  2333333    26899999988


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        77 ~   77 (206)
T 1hdo_A           77 T   77 (206)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.47  E-value=0.0053  Score=61.53  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=52.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH-hCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY-GLGADYV---VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~-~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      |++++|+||+||||..+++.....  |++|+.+++++++.+.+. ++|....   .|.++.. .+.+.+.+.+..+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            678999999999999888654444  579999999988776654 3443222   2444421 11233333333347999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9998885

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.47  E-value=0.0065  Score=60.56  Aligned_cols=82  Identities=15%  Similarity=0.082  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHH----HHHHhCCCcE-E--EeCCccc-hhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGV----AKAYGLGADY-V--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~----~~a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .++++|+|+||+||||..+++.....|++|++++ ++.++.    +.+++.|... +  .|.++.. .+.+.+.+.+..+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999998887778899998877 333332    2334455432 2  2333321 1223344444445


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus        91 ~id~lv~~Ag~  101 (256)
T 3ezl_A           91 EIDVLVNNAGI  101 (256)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999884

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.42  E-value=0.0019  Score=65.31  Aligned_cols=78  Identities=18%  Similarity=0.128  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++|+|+||+||||..+++.....|++|++++++.++.+   +..+..+ .|.++.. .+.+.+.+.+..+++|+++.+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  103 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNN  103 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            5789999999999999999888888999999998765432   1122211 2444321 112233333333479999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus       104 Ag~  106 (260)
T 3un1_A          104 AGV  106 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            874

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.41  E-value=0.0037  Score=63.16  Aligned_cols=79  Identities=13%  Similarity=-0.005  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHH---HHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQ---ILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~---i~~~~~  179 (655)
                      .|++|+|+||+|+||..++......|++|+++++++++.+.+    ++.|... +  .|..+.  +++.+.   +.+..+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP--KSVEETISQQEKDFG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH--HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH--HHHHHHHHHHHHHhC
Confidence            688999999999999998887777799999999887654433    2234332 2  244432  233332   222224


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.++|.
T Consensus       111 ~id~li~~Ag~  121 (279)
T 3ctm_A          111 TIDVFVANAGV  121 (279)
T ss_dssp             CCSEEEECGGG
T ss_pred             CCCEEEECCcc
Confidence            68999998873

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.40  E-value=0.0047  Score=61.37  Aligned_cols=74  Identities=14%  Similarity=0.032  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChH-HHHHHHhCCCcEE--EeCCccchhHHHHHHHhc-CCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPV-GVAKAYGLGADYV--VDHTIRELDRFANQILSY-GSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~-k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~-~~gvDv  183 (655)
                      ..|++|+|+||+||||..+++.... .|++|++++++++ +.+      ....  .|.++.  ++..+.+... .+++|+
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~------~~~~~~~Dv~~~--~~v~~~~~~~~~~~id~   73 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE------NLKFIKADLTKQ--QDITNVLDIIKNVSFDG   73 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT------TEEEEECCTTCH--HHHHHHHHHTTTCCEEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc------cceEEecCcCCH--HHHHHHHHHHHhCCCCE
Confidence            3678999999999999988865544 7889998887654 211      1122  244432  2343333222 237999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.++|.
T Consensus        74 lv~nAg~   80 (244)
T 4e4y_A           74 IFLNAGI   80 (244)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.39  E-value=0.0077  Score=61.86  Aligned_cols=90  Identities=12%  Similarity=0.108  Sum_probs=58.5

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHHH---HHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVAK---AYGLGADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~~---a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+|+|+||+|.+|..+++.....|.+|++++++++ +.+.   +...|+..+ .|..+.  +++.+.+    .++|+|+.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~--~~l~~a~----~~~d~vi~   85 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEH--EKLVELM----KKVDVVIS   85 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCH--HHHHHHH----TTCSEEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCH--HHHHHHH----cCCCEEEE
Confidence            47999999999999999988888999999998764 4333   245676544 244432  2333333    26999999


Q ss_pred             CCCcchHHHHHHHHHHhcccc
Q psy14589        187 GFTDPVYRARRKYFADLAFNY  207 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~l~~gG  207 (655)
                      ++|..........+++++..|
T Consensus        86 ~a~~~~~~~~~~l~~aa~~~g  106 (318)
T 2r6j_A           86 ALAFPQILDQFKILEAIKVAG  106 (318)
T ss_dssp             CCCGGGSTTHHHHHHHHHHHC
T ss_pred             CCchhhhHHHHHHHHHHHhcC
Confidence            998541111344455555444

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.38  E-value=0.025  Score=55.94  Aligned_cols=101  Identities=15%  Similarity=0.038  Sum_probs=70.4

Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc----EEEeCCccchhHHHHHHHhc
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD----YVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd----~vId~~~~~~~d~~~~i~~~  177 (655)
                      .....+ ++|++||-.|+  |.|..+..+++..|++|++++.+++.++.+++....    .++...-.   ++     ..
T Consensus        48 ~~~~~~-~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~---~~-----~~  116 (266)
T 3ujc_A           48 LSDIEL-NENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDIL---TK-----EF  116 (266)
T ss_dssp             TTTCCC-CTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT---TC-----CC
T ss_pred             HHhcCC-CCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc---cC-----CC
Confidence            344456 78999999998  478899999998899999999999999988876432    22221110   10     11


Q ss_pred             -CCCeeEEEeCCCc------chHHHHHHHHHHhccccceEEEe
Q psy14589        178 -GSELDADHPGFTD------PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 -~~gvDvV~D~vG~------~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       .+.+|+|+....-      ...+.+..+.++|++||++++..
T Consensus       117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~  159 (266)
T 3ujc_A          117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD  159 (266)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence             2379999865321      11234678888999999999875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.38  E-value=0.0045  Score=61.97  Aligned_cols=81  Identities=16%  Similarity=0.197  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC---CeEEEEecChHHHHHHHhC---CCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG---LTVFASVGCPVGVAKAYGL---GAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G---a~Viat~~s~~k~~~a~~L---GAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .+.+|+|+||+|+||..+++.....|   ++|+++++++++.+.+.++   +.. .+  .|.++.. ...+.+.+.+..+
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   99 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   99 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence            68899999999999999998888889   8999999987654433322   322 22  2444321 1223333333322


Q ss_pred             --CeeEEEeCCCc
Q psy14589        180 --ELDADHPGFTD  190 (655)
Q Consensus       180 --gvDvV~D~vG~  190 (655)
                        ++|+++.++|.
T Consensus       100 ~~~id~li~~Ag~  112 (267)
T 1sny_A          100 DQGLNVLFNNAGI  112 (267)
T ss_dssp             GGCCSEEEECCCC
T ss_pred             CCCccEEEECCCc
Confidence              69999999873

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.38  E-value=0.019  Score=54.25  Aligned_cols=97  Identities=10%  Similarity=-0.137  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC----------CeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG----------LTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G----------a~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~  177 (655)
                      ++|++||..|+ |+ |..++.+++..|          .+|++++.++..     .+..-..+ ...-.. .+..+.+.+.
T Consensus        21 ~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~~~~~~~~~~~d~~~-~~~~~~~~~~   92 (196)
T 2nyu_A           21 RPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----PLEGATFLCPADVTD-PRTSQRILEV   92 (196)
T ss_dssp             CTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----CCTTCEEECSCCTTS-HHHHHHHHHH
T ss_pred             CCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc-----cCCCCeEEEeccCCC-HHHHHHHHHh
Confidence            78999999998 55 889999999986          789999998742     11112233 211110 1233333332


Q ss_pred             C--CCeeEEEe-----CCCcch----------HHHHHHHHHHhccccceEEEe
Q psy14589        178 G--SELDADHP-----GFTDPV----------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~--~gvDvV~D-----~vG~~~----------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .  +.+|+|+-     ++|...          ...++.+.+.|++||++++..
T Consensus        93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            2  27999993     344320          134677889999999998763

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.38  E-value=0.0051  Score=63.36  Aligned_cols=76  Identities=12%  Similarity=-0.036  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-----CC--CcEE--EeCCccchhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-----LG--ADYV--VDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-----LG--Ad~v--Id~~~~~~~d~~~~i~~~~~  179 (655)
                      .+|.+|||+||+|.||..+++.+...|.+|++++++.++.+.+.+     .+  ...+  .|..+.      +.+.+.-.
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~------~~~~~~~~   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ------GAYDEVIK   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST------TTTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh------HHHHHHHc
Confidence            468899999999999999998887889999999998877654432     12  2222  133332      11222223


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+|+.++|.
T Consensus        83 ~~d~vih~A~~   93 (342)
T 1y1p_A           83 GAAGVAHIASV   93 (342)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEEeCCC
Confidence            78999999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.37  E-value=0.008  Score=59.30  Aligned_cols=79  Identities=15%  Similarity=0.105  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcEE---EeCCccchhHHHH---HHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADYV---VDHTIRELDRFAN---QILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~---~i~~~~  178 (655)
                      .|++|+|+||+|+||..+++.....|++|+++ .+++++.+.+    ++.|....   .|.++.  +++.+   .+.+..
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNP--EDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSH--HHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCH--HHHHHHHHHHHHhc
Confidence            57899999999999999998888889999988 5555444332    33454322   244432  22322   232323


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.37  E-value=0.0032  Score=61.23  Aligned_cols=73  Identities=12%  Similarity=0.089  Sum_probs=50.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|+|+||+|++|..+++.+...|.+|+++++++++.+.+  .++ .++...-.   +..+.+.+.-.++|+|+.++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~-~~~~~D~~---d~~~~~~~~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNV-KAVHFDVD---WTPEEMAKQLHGMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTE-EEEECCTT---SCHHHHHTTTTTCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCc-eEEEeccc---CCHHHHHHHHcCCCEEEECCcCC
Confidence            699999999999999998888899999999988765322  222 22322111   10233444444799999999853

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.36  E-value=0.0055  Score=65.60  Aligned_cols=97  Identities=10%  Similarity=-0.062  Sum_probs=66.6

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH-HHhCCC-------------cEEEeCCccchhHH-
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK-AYGLGA-------------DYVVDHTIRELDRF-  170 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-a~~LGA-------------d~vId~~~~~~~d~-  170 (655)
                      .+  +|++|+|.|+ |.||..+++.+...|++|+++++++++++. +.++|+             |.++......  .+ 
T Consensus       170 ~L--~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a~~~--~I~  244 (364)
T 1leh_A          170 SL--EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALGA--VLN  244 (364)
T ss_dssp             CC--TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECSCSC--CBS
T ss_pred             CC--CcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccchHH--HhC
Confidence            46  8999999999 999999999999999999999998887764 344454             3333322110  00 


Q ss_pred             HHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEE
Q psy14589        171 ANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       171 ~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~  211 (655)
                      .+.+...  +.++|++++.++.  ..+++.+.++.+|.++.
T Consensus       245 ~~~~~~l--g~~iV~e~An~p~--t~~ea~~~L~~~Gi~~~  281 (364)
T 1leh_A          245 DFTIPQL--KAKVIAGSADNQL--KDPRHGKYLHELGIVYA  281 (364)
T ss_dssp             TTHHHHC--CCSEECCSCSCCB--SSHHHHHHHHHHTCEEC
T ss_pred             HHHHHhC--CCcEEEeCCCCCc--ccHHHHHHHHhCCCEEe
Confidence            0112222  5688888887773  03467788888887554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.35  E-value=0.017  Score=58.77  Aligned_cols=91  Identities=12%  Similarity=0.123  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-----hHHHHHH---HhCCCcEE-EeCCccchhHHHHHHHhcCCCe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-----PVGVAKA---YGLGADYV-VDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-----~~k~~~a---~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gv  181 (655)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++     +++.+.+   ...|+..+ .|..+.  +++.+.+    .++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~l~~~~----~~~   77 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH--QRLVDAL----KQV   77 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH--HHHHHHH----TTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCH--HHHHHHH----hCC
Confidence            4579999999999999998888889999999987     4454433   34465433 244332  2333333    269


Q ss_pred             eEEEeCCCcc----hHHHHHHHHHHhcccc
Q psy14589        182 DADHPGFTDP----VYRARRKYFADLAFNY  207 (655)
Q Consensus       182 DvV~D~vG~~----~~~~l~~~l~~l~~gG  207 (655)
                      |+|+.++|..    ........+++++..|
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g  107 (313)
T 1qyd_A           78 DVVISALAGGVLSHHILEQLKLVEAIKEAG  107 (313)
T ss_dssp             SEEEECCCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred             CEEEECCccccchhhHHHHHHHHHHHHhcC
Confidence            9999998753    1011344555555544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.34  E-value=0.0067  Score=60.76  Aligned_cols=80  Identities=15%  Similarity=0.096  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHHHHHh----CCCc-EE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVAKAYG----LGAD-YV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~~a~~----LGAd-~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .+++++|+||+||||..+++.....|++|++++++++ +.+.+.+    .|.. .+  .|.++.. .+.+.+.+.+..++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999998887788999998866543 3333332    2222 12  3444431 11223333333347


Q ss_pred             eeEEEeCCC
Q psy14589        181 LDADHPGFT  189 (655)
Q Consensus       181 vDvV~D~vG  189 (655)
                      +|+++.++|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=96.34  E-value=0.0058  Score=62.01  Aligned_cols=99  Identities=18%  Similarity=0.118  Sum_probs=68.0

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCC-cEEEeCCccchhHHHHHHHhc
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGA-DYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGA-d~vId~~~~~~~d~~~~i~~~  177 (655)
                      ..+ ++|++||-.|+ |. |.+++.+++..  +.+|++++.+++..+.+++    .|. +.+ .....   |+.+.+  .
T Consensus       108 ~~~-~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v-~~~~~---d~~~~~--~  178 (277)
T 1o54_A          108 LDV-KEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERV-TIKVR---DISEGF--D  178 (277)
T ss_dssp             TTC-CTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGE-EEECC---CGGGCC--S
T ss_pred             hCC-CCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCE-EEEEC---CHHHcc--c
Confidence            355 78999999998 44 88999999986  4699999999988877754    464 222 11111   111111  1


Q ss_pred             CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        178 GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.+|+|+-..... ++.++.+.++|++||+++++.
T Consensus       179 ~~~~D~V~~~~~~~-~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          179 EKDVDALFLDVPDP-WNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             CCSEEEEEECCSCG-GGTHHHHHHHEEEEEEEEEEE
T ss_pred             CCccCEEEECCcCH-HHHHHHHHHHcCCCCEEEEEe
Confidence            13699999766544 123889999999999998864

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.33  E-value=0.0036  Score=59.67  Aligned_cols=97  Identities=16%  Similarity=0.047  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----CCC-c--EEEeCCccchhHHHHHHHhcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----LGA-D--YVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----LGA-d--~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      ++|++||-.|+  |.|..+..+++..+  .+|++++.+++..+.+++    .|. +  .++...-.   ++.   ....+
T Consensus        21 ~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~---~~~~~   92 (197)
T 3eey_A           21 KEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQ---NMD---KYIDC   92 (197)
T ss_dssp             CTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGG---GGG---GTCCS
T ss_pred             CCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH---HHh---hhccC
Confidence            68999999998  34788889999864  599999999988777653    454 2  22322111   111   11224


Q ss_pred             CeeEEEeCCCc-------------chHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTD-------------PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~-------------~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+|+|+-..+-             ...+.++.+.+.|++||+++++.
T Consensus        93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A           93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence            79999855432             11234889999999999998864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.33  E-value=0.0095  Score=60.12  Aligned_cols=81  Identities=22%  Similarity=0.130  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .+++++|+||+||||..+++.....|++|++++ ++.++.+..    ++.|.. .+  .|.++.. .+++.+.+.+..++
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK  103 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            678899999999999999888878899999887 444443332    233432 22  3444421 12233334333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       104 id~li~nAg~  113 (269)
T 3gk3_A          104 VDVLINNAGI  113 (269)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.32  E-value=0.0047  Score=58.23  Aligned_cols=97  Identities=13%  Similarity=0.101  Sum_probs=64.7

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc--EEEeCCccchhHHHHHHHhc-C
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD--YVVDHTIRELDRFANQILSY-G  178 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd--~vId~~~~~~~d~~~~i~~~-~  178 (655)
                      .+ ++|++||=.|+  |.|..++.+|+. +.+|++++.+++.++.+++    .|.+  .++. ...  .+    +... .
T Consensus        19 ~~-~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~--~~----l~~~~~   87 (185)
T 3mti_A           19 VL-DDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGH--EN----LDHYVR   87 (185)
T ss_dssp             TC-CTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCG--GG----GGGTCC
T ss_pred             hC-CCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcH--HH----HHhhcc
Confidence            45 78999999898  457888888887 8899999999988777643    3432  2333 111  11    1111 2


Q ss_pred             CCeeEEEeCCCc-------------chHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTD-------------PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~-------------~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+|+|+-..+.             .....++.+.+.|++||+++++.
T Consensus        88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  135 (185)
T 3mti_A           88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI  135 (185)
T ss_dssp             SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence            369998755321             11133578889999999999874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.31  E-value=0.0099  Score=62.41  Aligned_cols=76  Identities=8%  Similarity=-0.036  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEecChHHHHHHHh-C---CCcEE-EeCCccchhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY-GL-TVFASVGCPVGVAKAYG-L---GADYV-VDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga-~Viat~~s~~k~~~a~~-L---GAd~v-Id~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .|.+|||+||+|++|..+++..... |. +|+++++++.+.+.+.+ +   +...+ .|..+.      +.+.+.-.++|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~------~~l~~~~~~~D   93 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL------ERLNYALEGVD   93 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH------HHHHHHTTTCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH------HHHHHHHhcCC
Confidence            6889999999999999999877777 98 99999999887665532 2   22222 233331      22333333799


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      +|+.++|..
T Consensus        94 ~Vih~Aa~~  102 (344)
T 2gn4_A           94 ICIHAAALK  102 (344)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.30  E-value=0.0046  Score=70.60  Aligned_cols=79  Identities=15%  Similarity=0.011  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---------ChHHHH----HHHhCCCcEEEeCCccchhHHHHHH--
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG---------CPVGVA----KAYGLGADYVVDHTIRELDRFANQI--  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~---------s~~k~~----~a~~LGAd~vId~~~~~~~d~~~~i--  174 (655)
                      .|++++|+||+||||...++.....|++|+++++         +.++.+    .+++.|...+.|..+..  +..+.+  
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~--~~~~~~~~   95 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVI--DGAKVIET   95 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGG--GHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHH--HHHHHHHH
Confidence            7899999999999999998877788999998876         443333    33556777777776542  333333  


Q ss_pred             -HhcCCCeeEEEeCCCc
Q psy14589        175 -LSYGSELDADHPGFTD  190 (655)
Q Consensus       175 -~~~~~gvDvV~D~vG~  190 (655)
                       .+..+++|+++.++|.
T Consensus        96 ~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ---------CEECCCCC
T ss_pred             HHHHCCCCcEEEECCCC
Confidence             2323479999999884

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.30  E-value=0.0076  Score=60.33  Aligned_cols=100  Identities=13%  Similarity=-0.020  Sum_probs=66.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCC--C
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGS--E  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~--g  180 (655)
                      .++++||-.|+  |.|..++.+|+.+  +++|++++.+++..+.+++    .|...-+.....   +..+.+.....  .
T Consensus        62 ~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~---d~~~~l~~~~~~~~  136 (248)
T 3tfw_A           62 TQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG---PALQSLESLGECPA  136 (248)
T ss_dssp             HTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES---CHHHHHHTCCSCCC
T ss_pred             cCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc---CHHHHHHhcCCCCC
Confidence            46789999997  4577888999887  5699999999988877653    465411111111   33444444432  7


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+|+-..... ..+.++.+.+.|++||.+++-.
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            99988433333 2244788899999999887653

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.30  E-value=0.0067  Score=59.20  Aligned_cols=103  Identities=11%  Similarity=0.004  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcC--CC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYG--SE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~--~g  180 (655)
                      .++++||-.|+  |.|..++.+|+..  +.+|++++.+++..+.+++    .|...-+.....+..+....+....  +.
T Consensus        68 ~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~  145 (229)
T 2avd_A           68 IQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT  145 (229)
T ss_dssp             TTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred             cCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence            46789999997  4888899999886  5699999999988777653    4542111111110012222222211  47


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+|+-..... ..+.++.+.+.|++||.+++-.
T Consensus       146 ~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          146 FDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             EEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            99987544333 2244788999999999988753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.29  E-value=0.004  Score=61.86  Aligned_cols=75  Identities=13%  Similarity=0.123  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHH--------hcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQIL--------SYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~--------~~~~gv  181 (655)
                      .|++|+|+||+||||..+++.... |++|+++++++++.+.+.+......+...      +.+...        +.-+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D------~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESD------IVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECC------HHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecc------cchHHHHHHHHHHHHhcCCC
Confidence            578999999999999988776544 89999999999888877765433333221      211111        111379


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+++.++|..
T Consensus        77 d~lv~~Ag~~   86 (245)
T 3e9n_A           77 DTLVHAAAVA   86 (245)
T ss_dssp             SEEEECC---
T ss_pred             CEEEECCCcC
Confidence            9999999853

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.29  E-value=0.0098  Score=67.79  Aligned_cols=81  Identities=14%  Similarity=-0.038  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh---------HHHH----HHHhCCCcEEEeCCccc-hhHHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP---------VGVA----KAYGLGADYVVDHTIRE-LDRFANQIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~---------~k~~----~a~~LGAd~vId~~~~~-~~d~~~~i~  175 (655)
                      .|++++|+||++|||.+.++.....|++|++++++.         ++.+    .+++.|...+.|..+.. .+.+.+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            688999999999999999988888899999987643         3332    23455766666765531 123444444


Q ss_pred             hcCCCeeEEEeCCCc
Q psy14589        176 SYGSELDADHPGFTD  190 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~  190 (655)
                      +..+++|+++++.|-
T Consensus        87 ~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            444579999999984

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.27  E-value=0.017  Score=63.03  Aligned_cols=87  Identities=18%  Similarity=0.046  Sum_probs=55.2

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecChH---------------HH-HHHHhCCCcEE---EeC
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLA--AIQVGKAYGLTVFASVGCPV---------------GV-AKAYGLGADYV---VDH  162 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~--avQlAk~~Ga~Viat~~s~~---------------k~-~~a~~LGAd~v---Id~  162 (655)
                      .... ..|++++|+||++|||.+  .+......|++|++++++..               .. +.+++.|....   .|.
T Consensus        54 ~~~~-~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv  132 (418)
T 4eue_A           54 AIGF-RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDA  132 (418)
T ss_dssp             SCCC-CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             cCcC-CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeC
Confidence            4445 689999999999999997  43333345999998887532               11 23355665432   244


Q ss_pred             Cccc-hhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        163 TIRE-LDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       163 ~~~~-~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      .+.. ...+.+.+.+..+++|+++.++|..
T Consensus       133 td~~~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          133 FSNETKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             TCHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            4421 1234445555456899999998864

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.23  E-value=0.0059  Score=61.64  Aligned_cols=97  Identities=12%  Similarity=0.033  Sum_probs=67.5

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHhC-----C--CcEE-EeCCccchhHHHHHHH
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYGL-----G--ADYV-VDHTIRELDRFANQIL  175 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~L-----G--Ad~v-Id~~~~~~~d~~~~i~  175 (655)
                      .+ ++|++||-.|+ | .|.+++.+++..  +.+|++++.+++..+.+++.     |  .+.+ +-..+     ..+.  
T Consensus        96 ~~-~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d-----~~~~--  165 (280)
T 1i9g_A           96 DI-FPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD-----LADS--  165 (280)
T ss_dssp             TC-CTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC-----GGGC--
T ss_pred             CC-CCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc-----hHhc--
Confidence            45 78999999998 4 888999999976  56999999999888777542     4  2222 11111     1111  


Q ss_pred             hc-CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        176 SY-GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~-~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .. .+.+|+|+-..... ++.++.+.++|++||+++++.
T Consensus       166 ~~~~~~~D~v~~~~~~~-~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          166 ELPDGSVDRAVLDMLAP-WEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             CCCTTCEEEEEEESSCG-GGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCceeEEEECCcCH-HHHHHHHHHhCCCCCEEEEEe
Confidence            11 23699998766544 133889999999999999875

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.22  E-value=0.017  Score=56.37  Aligned_cols=99  Identities=13%  Similarity=-0.001  Sum_probs=66.6

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcC------CeEEEEecChHHHHHHHh----CC-----C--cEEEeCCccchh
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG------LTVFASVGCPVGVAKAYG----LG-----A--DYVVDHTIRELD  168 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G------a~Viat~~s~~k~~~a~~----LG-----A--d~vId~~~~~~~  168 (655)
                      .+ ++|++||-.|+ | .|..+..+++..+      .+|++++.+++..+.+++    .|     .  -.++.....  +
T Consensus        77 ~~-~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~--~  151 (227)
T 2pbf_A           77 VL-KPGSRAIDVGS-G-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIY--Q  151 (227)
T ss_dssp             TS-CTTCEEEEESC-T-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGG--G
T ss_pred             hC-CCCCEEEEECC-C-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChH--h
Confidence            45 78999999998 4 3888899999876      599999999988777754    23     1  222322111  0


Q ss_pred             HHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        169 RFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       169 d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.+.... .+.+|+|+...... .   ++.+.+.|++||++++..
T Consensus       152 ~~~~~~~~-~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          152 VNEEEKKE-LGLFDAIHVGASASEL---PEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             CCHHHHHH-HCCEEEEEECSBBSSC---CHHHHHHEEEEEEEEEEE
T ss_pred             cccccCcc-CCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEEE
Confidence            11110011 13699998776555 4   678889999999998864

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.21  E-value=0.013  Score=54.61  Aligned_cols=97  Identities=13%  Similarity=0.068  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCC-cEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGA-DYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGA-d~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .++++||-.|+ |. |..+..+++.. .+|++++.+++..+.+++    .|. +.+ .....   ++.+.+... +.+|+
T Consensus        32 ~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~~---d~~~~~~~~-~~~D~  103 (192)
T 1l3i_A           32 GKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEG---DAPEALCKI-PDIDI  103 (192)
T ss_dssp             CTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEES---CHHHHHTTS-CCEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcce-EEEec---CHHHhcccC-CCCCE
Confidence            68899999998 44 88888888765 899999999988777754    454 221 11111   233323221 37999


Q ss_pred             EEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+....-. ..+.++.+.+.|++||++++..
T Consensus       104 v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A          104 AVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             EEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            98654422 2244788888999999988764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.18  E-value=0.0022  Score=63.08  Aligned_cols=76  Identities=17%  Similarity=0.080  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+.+|+|+||+|+||..+++.+...|+  +|+++++++++.+....-++..+ .|..+.  ++    +.+.-.++|+|+.
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~--~~----~~~~~~~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL--DD----YASAFQGHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG--GG----GGGGGSSCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCH--HH----HHHHhcCCCEEEE
Confidence            467899999999999999988888899  99999988765432221123222 232221  12    2222237999999


Q ss_pred             CCCcc
Q psy14589        187 GFTDP  191 (655)
Q Consensus       187 ~vG~~  191 (655)
                      ++|..
T Consensus        91 ~ag~~   95 (242)
T 2bka_A           91 CLGTT   95 (242)
T ss_dssp             CCCCC
T ss_pred             CCCcc
Confidence            99864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.17  E-value=0.025  Score=59.57  Aligned_cols=97  Identities=13%  Similarity=0.062  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH--HHHHhC-CCcEE-Ee-CCccchhHHHHHHHhcCCCeeEEE
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV--AKAYGL-GADYV-VD-HTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~--~~a~~L-GAd~v-Id-~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++++.  +.+.+. ++..+ .| ..+.  +++.+.+    .++|+|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~--~~l~~~~----~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV--PLMDTLF----EGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCH--HHHHHHH----TTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCH--HHHHHHH----hcCCEEE
Confidence            56899999999999999987777899999999887654  334433 43332 23 3332  2233333    2689999


Q ss_pred             eCCCcc---hHHHHHHHHHHhcccc---ceEEEe
Q psy14589        186 PGFTDP---VYRARRKYFADLAFNY---KHFFFF  213 (655)
Q Consensus       186 D~vG~~---~~~~l~~~l~~l~~gG---rlv~v~  213 (655)
                      .+.+..   .+......++.++..|   ++|.+.
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~S  112 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSS  112 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeC
Confidence            776542   1112244455554444   666654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.17  E-value=0.01  Score=61.15  Aligned_cols=77  Identities=13%  Similarity=0.038  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH--HHHHhCCC---cEEE--eCCccchhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV--AKAYGLGA---DYVV--DHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~--~~a~~LGA---d~vI--d~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .|.+|||+||+|+||..+++.....|.+|+++++++++.  +.+.+++.   -.++  |..+.  +++.+.+...  ++|
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~--~~d   77 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEF--SNIIRTIEKV--QPD   77 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCH--HHHHHHHHHH--CCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCH--HHHHHHHHhc--CCC
Confidence            467899999999999999988777899999999876542  23444431   1222  33332  2343444332  479


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +|+.++|.
T Consensus        78 ~vih~A~~   85 (345)
T 2z1m_A           78 EVYNLAAQ   85 (345)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999885

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.15  E-value=0.011  Score=60.04  Aligned_cols=74  Identities=14%  Similarity=0.034  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHH--HHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGV--AKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~--~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      ..+|+|+||+|.+|..+++.+...| .+|+++++++++.  +.+...|+..+. |..+.  +++.+.+    .++|+|+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~--~~l~~~~----~~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQ--VIMELAL----NGAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCH--HHHHHHH----TTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCH--HHHHHHH----hcCCEEEE
Confidence            4689999999999999998777778 8999999987653  334456765442 44332  2333333    26899999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        79 ~a~~   82 (299)
T 2wm3_A           79 VTNY   82 (299)
T ss_dssp             CCCH
T ss_pred             eCCC
Confidence            9874

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.14  E-value=0.012  Score=61.34  Aligned_cols=89  Identities=16%  Similarity=0.112  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||...++.++.+|++|++.++++++ +.+.+.|++.+    +     +.+.+.    ..|+|+-++.
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~----~-----l~ell~----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV----D-----LETLLK----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC----C-----HHHHHH----HCSEEEECCC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc----C-----HHHHHh----hCCEEEEecC
Confidence            6889999999 999999999999999999999988776 56778887531    1     222232    3699998886


Q ss_pred             cc--hHHHH-HHHHHHhccccceEEEe
Q psy14589        190 DP--VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~--~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                      ..  +...+ ...++.+++++.+|-++
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lin~a  232 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKTAILINTS  232 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CChHHhhhcCHHHHhcCCCCeEEEECC
Confidence            43  10002 45778899988777654

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.14  E-value=0.031  Score=56.51  Aligned_cols=103  Identities=11%  Similarity=-0.026  Sum_probs=68.5

Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHh
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      +.....+ ++|++||-.|+  |.|..+..+++..|++|++++.+++..+.+++    .|...-+.....   ++.    +
T Consensus        56 ~~~~~~~-~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~---d~~----~  125 (287)
T 1kpg_A           56 ALGKLGL-QPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA---GWE----Q  125 (287)
T ss_dssp             HHTTTTC-CTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES---CGG----G
T ss_pred             HHHHcCC-CCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC---Chh----h
Confidence            3344556 78999999998  45888899998889999999999988777754    343211111111   111    1


Q ss_pred             cCCCeeEEEeC-----CCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPG-----FTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~-----vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+.+|+|+..     ++.+ ..+.++.+.++|++||++++..
T Consensus       126 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          126 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CCCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            12468998754     3322 2234788899999999999875

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=96.12  E-value=0.012  Score=60.19  Aligned_cols=35  Identities=23%  Similarity=0.283  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGC  144 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s  144 (655)
                      .|++++|+||+  ||||..+++.....|++|++++++
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            68899999999  999999988777789999998754

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.08  E-value=0.014  Score=56.78  Aligned_cols=100  Identities=14%  Similarity=-0.026  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc---C-
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY---G-  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~---~-  178 (655)
                      .++++||-.|+  |.|..++.+|+.+  +.+|++++.+++..+.+++    .|...-+.....   +..+.+...   . 
T Consensus        63 ~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~~~~~  137 (225)
T 3tr6_A           63 MQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS---PAKDTLAELIHAGQ  137 (225)
T ss_dssp             HTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CHHHHHHHHHTTTC
T ss_pred             hCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC---CHHHHHHHhhhccC
Confidence            36778998887  4577888999876  5799999999987777653    454321111111   222222222   1 


Q ss_pred             -CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 -SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 -~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       +.+|+|+-..... ....++.+.+.|++||++++-.
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence             4799998544433 2244788899999999988753

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.08  E-value=0.022  Score=56.54  Aligned_cols=101  Identities=7%  Similarity=-0.021  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc---CCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY---GSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~---~~g  180 (655)
                      ++++||-.|+  |.|..++.+|+++  +.+|++++.+++..+.++    +.|.+.-+.....+..+....+.+.   .+.
T Consensus        70 ~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~  147 (237)
T 3c3y_A           70 NAKKTIEVGV--FTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS  147 (237)
T ss_dssp             TCCEEEEECC--TTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred             CCCEEEEeCC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence            5678999887  5677888889886  579999999998877765    3465321111111001222222211   247


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+|+-..... ..+.++.+.+.|++||.++.-
T Consensus       148 fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          148 YDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence            99988544333 224478889999999988764

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=96.07  E-value=0.099  Score=50.06  Aligned_cols=96  Identities=17%  Similarity=0.150  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh--c-CCCeeEEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS--Y-GSELDADH  185 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~--~-~~gvDvV~  185 (655)
                      .++.+||=.|+  |.|..+..+++. |++|++++.++.-++.+++.+...++...      ..+....  . ...+|+|+
T Consensus        51 ~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~~~~~fD~v~  121 (227)
T 3e8s_A           51 RQPERVLDLGC--GEGWLLRALADR-GIEAVGVDGDRTLVDAARAAGAGEVHLAS------YAQLAEAKVPVGKDYDLIC  121 (227)
T ss_dssp             TCCSEEEEETC--TTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHTCSSCEEECC------HHHHHTTCSCCCCCEEEEE
T ss_pred             CCCCEEEEeCC--CCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhcccccchhh------HHhhcccccccCCCccEEE
Confidence            36789998897  456777777776 89999999999999888877544444322      2221111  1 22599998


Q ss_pred             eCCC---cchHHHHHHHHHHhccccceEEEe
Q psy14589        186 PGFT---DPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       186 D~vG---~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      -...   .+....++.+.+.|++||++++..
T Consensus       122 ~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  152 (227)
T 3e8s_A          122 ANFALLHQDIIELLSAMRTLLVPGGALVIQT  152 (227)
T ss_dssp             EESCCCSSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ECchhhhhhHHHHHHHHHHHhCCCeEEEEEe
Confidence            5422   111234788899999999999875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.06  E-value=0.0099  Score=59.58  Aligned_cols=81  Identities=14%  Similarity=0.148  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChHHH-----HHHH-hCCCcEE---EeCCccc-hhHHHHHHHhc
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPVGV-----AKAY-GLGADYV---VDHTIRE-LDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~k~-----~~a~-~LGAd~v---Id~~~~~-~~d~~~~i~~~  177 (655)
                      .|++|+|+||+  ||+|..+++.....|++|++++++.++.     +.+. ..|....   .|.++.. .+++.+.+.+.
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            68899999999  8999988887778899999988774332     2222 2343322   2433321 12334444444


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.++|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            5589999999884

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.06  E-value=0.016  Score=59.92  Aligned_cols=78  Identities=13%  Similarity=-0.011  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH----HH---hCCCcEE-EeCCccchhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK----AY---GLGADYV-VDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~----a~---~LGAd~v-Id~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .+.+|||+||+|+||..+++.....|++|++++++.++.+.    +.   ..++..+ .|..+.  +++.+.+.+  .++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~--~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDE--RALARIFDA--HPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCH--HHHHHHHHH--SCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCH--HHHHHHHhc--cCC
Confidence            46799999999999999999888889999999886543222    21   1233222 233332  234444433  268


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+|+.++|..
T Consensus        80 d~vih~A~~~   89 (341)
T 3enk_A           80 TAAIHFAALK   89 (341)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEECcccc
Confidence            9999999853

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.04  E-value=0.024  Score=56.85  Aligned_cols=101  Identities=9%  Similarity=-0.017  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc---CCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY---GSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~---~~g  180 (655)
                      ++++||-.|+  |.|..++.+|+++  +++|++++.+++..+.+++    .|.+.-|.....+..+......+.   .+.
T Consensus        79 ~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~  156 (247)
T 1sui_A           79 NAKNTMEIGV--YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS  156 (247)
T ss_dssp             TCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred             CcCEEEEeCC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence            5678999887  6788888999986  6799999999988777653    565311111111001222222211   247


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+|+-..... ....++.+.+.|++||.++.-
T Consensus       157 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          157 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             EEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence            99987443333 224478899999999998764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.04  E-value=0.0093  Score=61.55  Aligned_cols=73  Identities=12%  Similarity=-0.054  Sum_probs=49.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      .+|||+||+|.||..+++.+...|.+|+++++++++.+.+.+.++..+ .|..+.      +.+.+.-.++|+|+.++|.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDH------AGLERALRGLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCH------HHHHHHTTTCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCH------HHHHHHHcCCCEEEECCcc
Confidence            489999999999999998888889999999998765543333354433 233331      2233333369999999874

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.02  E-value=0.026  Score=57.71  Aligned_cols=74  Identities=12%  Similarity=-0.016  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ++-.+|||+||+|.||..+++.....|.+|+++++++++ +.   ++...+ .|..+.  +++.+.+..  .++|+|+.+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~--~~~~~~~~~--~~~d~vih~   81 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDS--QRVKKVISD--IKPDYIFHL   81 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCH--HHHHHHHHH--HCCSEEEEC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCH--HHHHHHHHh--cCCCEEEEc
Confidence            456789999999999999998888889999999987654 21   333322 233332  234344432  248999999


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        82 A~~   84 (321)
T 2pk3_A           82 AAK   84 (321)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            875

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.01  E-value=0.036  Score=60.20  Aligned_cols=96  Identities=13%  Similarity=0.047  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcC-CCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYG-SELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~-~gvDvV~D~  187 (655)
                      .+++|+|.|+ |-+|..+++.++..|..|++++.++++.+.+++.|...+. |.++      .+.+++.+ ..+|+|+-+
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~------~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATR------MDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTC------HHHHHHTTTTTCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCC------HHHHHhcCCCccCEEEEC
Confidence            4567999999 9999999999999999999999999999999999976543 2222      12333332 378999999


Q ss_pred             CCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        188 FTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       188 vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ++.+ .+..+...++.+.+..++|.-
T Consensus        76 ~~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           76 IDDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             CSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCCCeEEEE
Confidence            9876 212233444555565566664

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.01  E-value=0.021  Score=57.49  Aligned_cols=94  Identities=14%  Similarity=0.094  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc-EEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD-YVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd-~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++|++||-.|+ |. |..++.+++ .|++|++++.++...+.+++    .|.+ .++.   .   ++.+.+.  .+.+|+
T Consensus       119 ~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~---~---d~~~~~~--~~~fD~  187 (254)
T 2nxc_A          119 RPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLE---G---SLEAALP--FGPFDL  187 (254)
T ss_dssp             CTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEE---S---CHHHHGG--GCCEEE
T ss_pred             CCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEE---C---ChhhcCc--CCCCCE
Confidence            68899999998 33 777777777 57899999999988777654    4543 2221   1   2333221  236999


Q ss_pred             EEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+-..-.. ..+.+..+.+.|++||++++.+
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~  218 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            98654333 2234678888999999999876

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=95.98  E-value=0.016  Score=55.31  Aligned_cols=73  Identities=19%  Similarity=0.080  Sum_probs=49.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE--eCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV--DHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      ++|+|+||+|++|..+++.....  +|+++++++++.+.+. +++. .++  |..+.  +++.+.+.+ .+++|+++.++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~--~~~~~~~~~-~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADE--LEAKALLEE-AGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSH--HHHHHHHHH-HCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCH--HHHHHHHHh-cCCCCEEEECC
Confidence            36999999999999887755444  9999999988776653 3443 332  33332  234444443 23799999998


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus        75 g~   76 (207)
T 2yut_A           75 GK   76 (207)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.98  E-value=0.02  Score=55.94  Aligned_cols=71  Identities=20%  Similarity=0.025  Sum_probs=48.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE--EeCCccchhHHHHHHHh--cCCCeeEEEe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV--VDHTIRELDRFANQILS--YGSELDADHP  186 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~--~~~gvDvV~D  186 (655)
                      |++|+|+||+|+||..+++.....|++|++++++++ .   .++   .+  .|..+.  +++.+.+.+  ..+++|+++.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---~~~---~~~~~D~~~~--~~~~~~~~~~~~~~~~d~li~   72 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---EDL---IYVEGDVTRE--EDVRRAVARAQEEAPLFAVVS   72 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---SSS---EEEECCTTCH--HHHHHHHHHHHHHSCEEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---cce---EEEeCCCCCH--HHHHHHHHHHHhhCCceEEEE
Confidence            578999999999999998877778999999988764 1   111   22  344432  233332222  2237999999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        73 ~ag~   76 (242)
T 1uay_A           73 AAGV   76 (242)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8874

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.95  E-value=0.012  Score=65.26  Aligned_cols=88  Identities=15%  Similarity=0.023  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|+|.|. |.||..+++.++.+|++|+++++++.+...+...|+.. .        ++.+.+.    ..|+|+-+++
T Consensus       276 ~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~--------~l~ell~----~aDiVi~~~~  341 (494)
T 3d64_A          276 AGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-V--------TMEYAAD----KADIFVTATG  341 (494)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-C--------CHHHHTT----TCSEEEECSS
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-C--------CHHHHHh----cCCEEEECCC
Confidence            8999999998 99999999999999999999999887754556677642 1        2222222    5799999986


Q ss_pred             cc-hHHHHHHHHHHhccccceEEEe
Q psy14589        190 DP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .. .  .-...++.|++|..++-++
T Consensus       342 t~~l--I~~~~l~~MK~gAilINvg  364 (494)
T 3d64_A          342 NYHV--INHDHMKAMRHNAIVCNIG  364 (494)
T ss_dssp             SSCS--BCHHHHHHCCTTEEEEECS
T ss_pred             cccc--cCHHHHhhCCCCcEEEEcC
Confidence            65 2  0257788999988777765

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=95.93  E-value=0.017  Score=62.28  Aligned_cols=83  Identities=22%  Similarity=0.290  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCCchHHHH-HHHHHHcCCeEEEEecChHH----------------HHHHHhCCCcEE-Ee--CCccc-h
Q psy14589        109 PEPDTLFIIGANRGNGLAA-IQVGKAYGLTVFASVGCPVG----------------VAKAYGLGADYV-VD--HTIRE-L  167 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~a-vQlAk~~Ga~Viat~~s~~k----------------~~~a~~LGAd~v-Id--~~~~~-~  167 (655)
                      ..+++|||+|||+|+|++. +.+|...|+.|+++....+.                .+.+++.|...+ ++  ..+.. .
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            4689999999999999864 55665679988887654321                234556665443 33  33321 1


Q ss_pred             hHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        168 DRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       168 ~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +...+.+++..+++|+++.+++..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence            344555666566899999998866

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.93  E-value=0.011  Score=58.71  Aligned_cols=96  Identities=9%  Similarity=-0.036  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC----CCcEEEeCCccchhHHHHHHHhcC-CCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL----GADYVVDHTIRELDRFANQILSYG-SELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L----GAd~vId~~~~~~~d~~~~i~~~~-~gvDv  183 (655)
                      ++|.+||-.|+  |.|..+..+++..+++|++++.+++-++.+++.    +....+-..     ++.+...... +.+|.
T Consensus        59 ~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~-----~a~~~~~~~~~~~FD~  131 (236)
T 3orh_A           59 SKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-----LWEDVAPTLPDGHFDG  131 (236)
T ss_dssp             TTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-----CHHHHGGGSCTTCEEE
T ss_pred             cCCCeEEEECC--CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEee-----hHHhhcccccccCCce
Confidence            58999999998  467788888887778999999999888888653    322222111     2333333332 36888


Q ss_pred             E-EeCCCcc--------hHHHHHHHHHHhccccceEE
Q psy14589        184 D-HPGFTDP--------VYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       184 V-~D~vG~~--------~~~~l~~~l~~l~~gGrlv~  211 (655)
                      | +|++...        ....++.+.++|||||+++.
T Consensus       132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f  168 (236)
T 3orh_A          132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY  168 (236)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred             EEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence            7 5665432        11235678889999998764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.93  E-value=0.016  Score=59.71  Aligned_cols=78  Identities=10%  Similarity=0.011  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH--HHHHhC----CCcEE-EeCCccchhHHHHHHHhcCCCe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV--AKAYGL----GADYV-VDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~--~~a~~L----GAd~v-Id~~~~~~~d~~~~i~~~~~gv  181 (655)
                      +++.+|||+||+|.||..+++.+...|.+|+++++++++.  ..+..+    +...+ .|..+.  +++.+.+...  ++
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~--~~   87 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA--CSVQRAVIKA--QP   87 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCH--HHHHHHHHHH--CC
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCH--HHHHHHHHHc--CC
Confidence            5789999999999999999988888899999999876431  223333    22222 233332  2344444332  47


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+|+.++|.
T Consensus        88 d~Vih~A~~   96 (335)
T 1rpn_A           88 QEVYNLAAQ   96 (335)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECccc
Confidence            999999875

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.92  E-value=0.025  Score=54.92  Aligned_cols=100  Identities=11%  Similarity=-0.123  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHHHHHHhcC-
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFANQILSYG-  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~~~i~~~~-  178 (655)
                      .++++||-.|+  |.|..++.+|+..  +++|++++.+++..+.++    ..|..   .++.-..   .+......... 
T Consensus        57 ~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~~~  131 (223)
T 3duw_A           57 QGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA---LDSLQQIENEKY  131 (223)
T ss_dssp             HTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHHHHTTC
T ss_pred             hCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHHHHhcCC
Confidence            36789998887  5677888899887  679999999998777764    34643   2222111   12222222222 


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+|+|+-..... ..+.++.+.+.|++||.+++-.
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            3699988444333 2244788899999999777643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.92  E-value=0.0093  Score=61.75  Aligned_cols=77  Identities=12%  Similarity=0.005  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH-HHHhCCCcEEE--eCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA-KAYGLGADYVV--DHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~-~a~~LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .|.+|||+||+|+||..+++.+...|.+|++++++..+.. .+.++..-.++  |..+.  +++.+.+.+.  ++|+|+.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~--~~~~~~~~~~--~~D~vih   94 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDA--GLLERAFDSF--KPTHVVH   94 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCH--HHHHHHHHHH--CCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCH--HHHHHHHhhc--CCCEEEE
Confidence            6789999999999999999888888999999998643321 11222212222  33332  2344444333  6899999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        95 ~A~~   98 (330)
T 2pzm_A           95 SAAA   98 (330)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9874

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=95.92  E-value=0.011  Score=61.86  Aligned_cols=37  Identities=16%  Similarity=-0.032  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHH--cCCeEEEEecChH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKA--YGLTVFASVGCPV  146 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~--~Ga~Viat~~s~~  146 (655)
                      .+.+|||+||+|.||..+++....  .|++|+++++++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            688999999999999999987777  8999999998654

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.92  E-value=0.011  Score=62.05  Aligned_cols=76  Identities=13%  Similarity=0.027  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh-CCCcEE-EeCC-ccchhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG-LGADYV-VDHT-IRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~-LGAd~v-Id~~-~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      .+.+|||+||+|.||..+++.+... |.+|+++++++++.+.+.+ .+...+ .|.. +.  +.+.+.+.    ++|+|+
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~--~~~~~~~~----~~d~Vi   96 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINK--EWVEYHVK----KCDVIL   96 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCH--HHHHHHHH----HCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCH--HHHHHHhc----cCCEEE
Confidence            4678999999999999999877776 8999999998776554433 343333 2333 21  22333333    689999


Q ss_pred             eCCCcc
Q psy14589        186 PGFTDP  191 (655)
Q Consensus       186 D~vG~~  191 (655)
                      .++|..
T Consensus        97 h~A~~~  102 (372)
T 3slg_A           97 PLVAIA  102 (372)
T ss_dssp             ECBCCC
T ss_pred             EcCccc
Confidence            988743

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.91  E-value=0.013  Score=59.48  Aligned_cols=99  Identities=15%  Similarity=0.103  Sum_probs=67.8

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----C-CCcEE-EeCCccchhHHHHHH
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----L-GADYV-VDHTIRELDRFANQI  174 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----L-GAd~v-Id~~~~~~~d~~~~i  174 (655)
                      ....+ ++|++||-.|+  |.|..+..+++..  +.+|++++.+++..+.+++    . |.+.+ +-..     |+.+  
T Consensus       104 ~~~~~-~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~-----d~~~--  173 (275)
T 1yb2_A          104 MRCGL-RPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-----DIAD--  173 (275)
T ss_dssp             --CCC-CTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-----CTTT--
T ss_pred             HHcCC-CCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC-----chhc--
Confidence            34456 78999999997  4677888899874  6799999999988877754    3 64332 1111     1111  


Q ss_pred             Hhc-CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        175 LSY-GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~-~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       .. .+.+|+|+-..... .+.++.+.+.|++||+++++.
T Consensus       174 -~~~~~~fD~Vi~~~~~~-~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          174 -FISDQMYDAVIADIPDP-WNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             -CCCSCCEEEEEECCSCG-GGSHHHHHHTEEEEEEEEEEE
T ss_pred             -cCcCCCccEEEEcCcCH-HHHHHHHHHHcCCCCEEEEEe
Confidence             11 13699999766544 123889999999999999875

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.87  E-value=0.0079  Score=62.54  Aligned_cols=97  Identities=15%  Similarity=-0.006  Sum_probs=65.0

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      .+ ++|++||-.|+ |. |.++..+++..+  .+|++++.+++..+.+++    .|.+.+ +....   |..+... ..+
T Consensus        72 ~~-~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~---d~~~~~~-~~~  143 (317)
T 1dl5_A           72 GL-DKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCG---DGYYGVP-EFS  143 (317)
T ss_dssp             TC-CTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES---CGGGCCG-GGC
T ss_pred             CC-CCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEEC---Chhhccc-cCC
Confidence            45 78999999998 43 888888988753  469999999988777753    464432 11111   1111111 123


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+|+|+....-. .   .+.+.+.|++||++++..
T Consensus       144 ~fD~Iv~~~~~~~~---~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          144 PYDVIFVTVGVDEV---PETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             CEEEEEECSBBSCC---CHHHHHHEEEEEEEEEEB
T ss_pred             CeEEEEEcCCHHHH---HHHHHHhcCCCcEEEEEE
Confidence            699999766554 3   367788999999998864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.86  E-value=0.019  Score=57.70  Aligned_cols=81  Identities=15%  Similarity=0.121  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .+++|+|+||+||||..+++.....|++|++++ +++++.+.+    ++.|... +  .|.++.. ..++.+.+.+..++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999988888899986644 555444332    3344332 2  2444321 11223333333347


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus       105 id~li~nAg~  114 (267)
T 4iiu_A          105 WYGVVSNAGI  114 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             ccEEEECCCC
Confidence            9999999874

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.86  E-value=0.015  Score=60.54  Aligned_cols=77  Identities=13%  Similarity=0.052  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC----CCcEE-EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL----GADYV-VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L----GAd~v-Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .+.+|||+||+|.||..+++.....|.+|+++++++++.+.+. .+    +...+ .|..+.  +++.+.+...  ++|+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~--~~d~   83 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ--NKLLESIREF--QPEI   83 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH--HHHHHHHHHH--CCSE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCH--HHHHHHHHhc--CCCE
Confidence            4678999999999999999888888999999998765433222 11    23222 233332  2333434332  4899


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      |+.++|.
T Consensus        84 vih~A~~   90 (357)
T 1rkx_A           84 VFHMAAQ   90 (357)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999984

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.83  E-value=0.018  Score=63.36  Aligned_cols=81  Identities=20%  Similarity=0.163  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--H-HHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCC-eeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--V-AKAYGLGADYV-VDHTIRE-LDRFANQILSYGSE-LDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~-~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~g-vDv  183 (655)
                      +|++++|+|++||||..+++.....|++|+.+++++..  . +.+.++|...+ .|.++.. .+.+.+.+.+..++ +|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            67899999999999998888777789999998875432  2 22345565433 3444431 12333444444444 999


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      ++.+.|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999885

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.83  E-value=0.013  Score=64.81  Aligned_cols=88  Identities=16%  Similarity=0.045  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|+|.|. |.||..+++.++.+|++|+++++++.+...+...|+. +.        ++.+.+    ...|+|+-+++
T Consensus       256 ~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~--------~l~ell----~~aDiVi~~~~  321 (479)
T 1v8b_A          256 SGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV--------TLDEIV----DKGDFFITCTG  321 (479)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC--------CHHHHT----TTCSEEEECCS
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ec--------CHHHHH----hcCCEEEECCC
Confidence            8999999998 9999999999999999999999998776556677763 21        222222    25799999886


Q ss_pred             cc-hHHHHHHHHHHhccccceEEEe
Q psy14589        190 DP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .. .  .-...++.|++|+.++-++
T Consensus       322 t~~l--I~~~~l~~MK~gailiNvg  344 (479)
T 1v8b_A          322 NVDV--IKLEHLLKMKNNAVVGNIG  344 (479)
T ss_dssp             SSSS--BCHHHHTTCCTTCEEEECS
T ss_pred             hhhh--cCHHHHhhcCCCcEEEEeC
Confidence            65 2  0246778899988877765

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.82  E-value=0.011  Score=56.70  Aligned_cols=96  Identities=15%  Similarity=-0.009  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      +++.+||-.|+  |.|..+..+++. |++|++++.+++.++.+++.|...+ .....   ++.+.  ...+.+|+|+-..
T Consensus        45 ~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~---d~~~~--~~~~~~D~v~~~~  115 (218)
T 3ou2_A           45 NIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNV-EFRQQ---DLFDW--TPDRQWDAVFFAH  115 (218)
T ss_dssp             TSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTE-EEEEC---CTTSC--CCSSCEEEEEEES
T ss_pred             CCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCe-EEEec---ccccC--CCCCceeEEEEec
Confidence            67889999998  447788888887 8899999999999988888663332 11111   11111  1123799998543


Q ss_pred             Ccc------hHHHHHHHHHHhccccceEEEe
Q psy14589        189 TDP------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .-.      ....++.+.+.|++||++++..
T Consensus       116 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~  146 (218)
T 3ou2_A          116 WLAHVPDDRFEAFWESVRSAVAPGGVVEFVD  146 (218)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence            221      1234778888999999999875

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.80  E-value=0.021  Score=58.36  Aligned_cols=70  Identities=17%  Similarity=0.054  Sum_probs=48.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +.+|||+||+|.||..+++.+...|.+|+++++++.+.+ +.  +...+. |..       .+.+.+.-.++|+|+.++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~-------~~~~~~~~~~~d~Vih~a~   71 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEYRVSDYT-------LEDLINQLNDVDAVVHLAA   71 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-------HHHHHHHTTTCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEEEEcccc-------HHHHHHhhcCCCEEEEccc
Confidence            368999999999999999988888999999999855544 33  443332 222       2233333337999999987


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        72 ~   72 (311)
T 3m2p_A           72 T   72 (311)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.80  E-value=0.018  Score=60.11  Aligned_cols=36  Identities=19%  Similarity=0.282  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecCh
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      .+++++|+|+++  |||..+++.....|++|+++++++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            367899999975  999998887777899999887654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.78  E-value=0.0061  Score=61.39  Aligned_cols=73  Identities=14%  Similarity=0.005  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .+++|+|+||+|+||..+++.....|++|+++++++.+.+   ..++..+ .|..+.  +++.+.+    .++|+|+.+.
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~--~~~~~~~----~~~D~vi~~A   72 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADA--NAVNAMV----AGCDGIVHLG   72 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCH--HHHHHHH----TTCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCH--HHHHHHH----cCCCEEEECC
Confidence            3578999999999999998888788999999999875543   2222222 233332  1222222    2689999998


Q ss_pred             Ccc
Q psy14589        189 TDP  191 (655)
Q Consensus       189 G~~  191 (655)
                      |..
T Consensus        73 g~~   75 (267)
T 3rft_A           73 GIS   75 (267)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=95.66  E-value=0.058  Score=55.73  Aligned_cols=76  Identities=8%  Similarity=-0.018  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----------HHHHHHHh---CCCcEE-EeCCccchhHHHHHHHh
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----------VGVAKAYG---LGADYV-VDHTIRELDRFANQILS  176 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----------~k~~~a~~---LGAd~v-Id~~~~~~~d~~~~i~~  176 (655)
                      +.+|+|+||+|.||..+++.....|.+|++++++.          +..+.+.+   .+...+ .|..+.  +++.+.+.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~--~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ--GALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH--HHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH--HHHHHHHHh
Confidence            46899999999999999988777899999997642          23333332   233322 233332  234444433


Q ss_pred             cCCCeeEEEeCCCc
Q psy14589        177 YGSELDADHPGFTD  190 (655)
Q Consensus       177 ~~~gvDvV~D~vG~  190 (655)
                      .  ++|+|+.++|.
T Consensus        80 ~--~~d~vih~A~~   91 (348)
T 1ek6_A           80 Y--SFMAVIHFAGL   91 (348)
T ss_dssp             C--CEEEEEECCSC
T ss_pred             c--CCCEEEECCCC
Confidence            2  69999999885

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.63  E-value=0.016  Score=60.00  Aligned_cols=70  Identities=17%  Similarity=0.102  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ..+.+|||+||+|.||..+++.....|.+|+++++++++      .+...+ .|..+.  +.+.+.+.    ++|+|+.+
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~--~~~~~~~~----~~d~vih~   84 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDG--QALSDAIM----GVSAVLHL   84 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCH--HHHHHHHT----TCSEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCH--HHHHHHHh----CCCEEEEC
Confidence            367899999999999999999888899999999988654      344443 233332  22333332    78999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        85 A~~   87 (347)
T 4id9_A           85 GAF   87 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.62  E-value=0.04  Score=54.57  Aligned_cols=81  Identities=12%  Similarity=0.048  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhc---
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSY---  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~---  177 (655)
                      .|++|+|+||+||||..+++.....|++|+++ .+++++.+.+    ++.|....   .|..+.. .+.+.+.+.+.   
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            68899999999999999998888889999875 4544444332    33444322   2333321 11222222221   


Q ss_pred             ---CCCeeEEEeCCCc
Q psy14589        178 ---GSELDADHPGFTD  190 (655)
Q Consensus       178 ---~~gvDvV~D~vG~  190 (655)
                         .+++|+++.++|.
T Consensus        86 ~~~~~~id~lv~nAg~  101 (255)
T 3icc_A           86 RTGSTKFDILINNAGI  101 (255)
T ss_dssp             HHSSSCEEEEEECCCC
T ss_pred             cccCCcccEEEECCCC
Confidence               1249999999885

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.62  E-value=0.023  Score=58.63  Aligned_cols=74  Identities=22%  Similarity=0.099  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH---HHHHhCCC----cEEE--eCCccchhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV---AKAYGLGA----DYVV--DHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~---~~a~~LGA----d~vI--d~~~~~~~d~~~~i~~~~~g  180 (655)
                      +|++|||+||+|.||..+++.....|.+|+++++++++.   ..+.++..    -.++  |..+.  +++.+.+.    +
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~----~   77 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADE--GSFDEAIK----G   77 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTST--TTTHHHHT----T
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCH--HHHHHHHc----C
Confidence            578999999999999999988878899999988876533   22223321    1122  43332  12333332    6


Q ss_pred             eeEEEeCCC
Q psy14589        181 LDADHPGFT  189 (655)
Q Consensus       181 vDvV~D~vG  189 (655)
                      +|+|+.+++
T Consensus        78 ~d~Vih~A~   86 (337)
T 2c29_D           78 CTGVFHVAT   86 (337)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEEecc
Confidence            899998775

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.61  E-value=0.032  Score=54.25  Aligned_cols=93  Identities=15%  Similarity=0.070  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----CC-----Cc--EEEeCCccchhHHHHHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----LG-----AD--YVVDHTIRELDRFANQIL  175 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----LG-----Ad--~vId~~~~~~~d~~~~i~  175 (655)
                      ++|++||-.|+ | .|..+..+++..|  .+|++++.+++.++.+++    .|     .+  .++...      ..... 
T Consensus        76 ~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d------~~~~~-  146 (226)
T 1i1n_A           76 HEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD------GRMGY-  146 (226)
T ss_dssp             CTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC------GGGCC-
T ss_pred             CCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC------cccCc-
Confidence            78999999998 3 4888888998876  599999999988877753    22     11  222211      11000 


Q ss_pred             hcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        176 SYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ...+.+|+|+...... .   ++.+.+.|++||++++..
T Consensus       147 ~~~~~fD~i~~~~~~~~~---~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          147 AEEAPYDAIHVGAAAPVV---PQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             GGGCCEEEEEECSBBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred             ccCCCcCEEEECCchHHH---HHHHHHhcCCCcEEEEEE
Confidence            0123699998765544 4   578889999999998853

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.60  E-value=0.14  Score=46.95  Aligned_cols=96  Identities=13%  Similarity=-0.007  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHHH---hCCCcEEE-eCCccchhHHHHHHHhc-CCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKAY---GLGADYVV-DHTIRELDRFANQILSY-GSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a~---~LGAd~vI-d~~~~~~~d~~~~i~~~-~~gvDv  183 (655)
                      ..++|+|.|+ |.+|...++.....|.+|++++++ +++.+.+.   ..|...+. |..+      .+.+.+. -.++|+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~------~~~l~~a~i~~ad~   74 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND------SSVLKKAGIDRCRA   74 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS------HHHHHHHTTTTCSE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCC------HHHHHHcChhhCCE
Confidence            3567999998 999999999888899999999987 45554443   34654432 2222      1223332 237899


Q ss_pred             EEeCCCcch-HHHHHHHHHHhccccceEEE
Q psy14589        184 DHPGFTDPV-YRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       184 V~D~vG~~~-~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |+-+++.+. +.......+.+.+..+++..
T Consensus        75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999998773 11123333444444566654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.60  E-value=0.049  Score=54.71  Aligned_cols=90  Identities=9%  Similarity=-0.055  Sum_probs=62.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      .+|+|+|| |.||..+++.+...|.+|+++++++++.+.+...+...+. |..     ++.      ..++|+|+.++|.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~-----d~~------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGE-----EPS------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSS-----CCC------CTTCCEEEECCCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEeccc-----ccc------cCCCCEEEECCCc
Confidence            57999998 9999999998888899999999999888877777765442 221     211      2379999999875


Q ss_pred             ch--HHHHHHHHHHhcc---c-cceEEEe
Q psy14589        191 PV--YRARRKYFADLAF---N-YKHFFFF  213 (655)
Q Consensus       191 ~~--~~~l~~~l~~l~~---g-Grlv~v~  213 (655)
                      ..  .......+++++.   + .++|.++
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~S  102 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLS  102 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEee
Confidence            41  0112334444433   2 5677665

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.59  E-value=0.046  Score=60.94  Aligned_cols=78  Identities=18%  Similarity=0.095  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHH-------HHHHHhCCCcEEE---eCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVG-------VAKAYGLGADYVV---DHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k-------~~~a~~LGAd~vI---d~~~~~~~d~~~~i~~~  177 (655)
                      +++.+|+|+|++|+||..+++.....|+ +|+.++++..+       .+.+++.|+...+   |..+.  +++.+.+.+ 
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~--~~v~~~~~~-  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAER--DALAALVTA-  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCH--HHHHHHHHH-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCH--HHHHHHHhc-
Confidence            5789999999999999999887777899 68888887531       2334556754322   44432  234444443 


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                       +.+|+||.+.|.
T Consensus       334 -~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 -YPPNAVFHTAGI  345 (511)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEECCcc
Confidence             469999999884

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.58  E-value=0.032  Score=63.52  Aligned_cols=81  Identities=15%  Similarity=0.092  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-H-HHHHHHhCCCcEEEeCCcc--chhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-V-GVAKAYGLGADYVVDHTIR--ELDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~-k~~~a~~LGAd~vId~~~~--~~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|++++|+||++|||...++.....|++|++.++.. + -.+.+++.|...+....+-  ..+.+.+.+.+..+++|+++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            578999999999999999988888899999887432 2 2344555665544332221  11123334433334799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      ++.|-
T Consensus       401 nNAGi  405 (604)
T 2et6_A          401 NNAGI  405 (604)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99884

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.57  E-value=0.031  Score=54.60  Aligned_cols=95  Identities=11%  Similarity=0.027  Sum_probs=65.3

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcC-------CeEEEEecChHHHHHHHh----CC-------CcEEEeCCccch
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG-------LTVFASVGCPVGVAKAYG----LG-------ADYVVDHTIREL  167 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-------a~Viat~~s~~k~~~a~~----LG-------Ad~vId~~~~~~  167 (655)
                      .+ ++|++||-.|+ | .|..+..+++..|       .+|++++.+++..+.+++    .|       .-.++...    
T Consensus        81 ~~-~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d----  153 (227)
T 1r18_A           81 HL-KPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD----  153 (227)
T ss_dssp             TC-CTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC----
T ss_pred             hC-CCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC----
Confidence            35 78999999998 4 3888889998776       499999999988777654    22       12222211    


Q ss_pred             hHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        168 DRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       168 ~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        ..+.... .+.+|+|+...+.. .   .+...+.|++||++++..
T Consensus       154 --~~~~~~~-~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          154 --GRKGYPP-NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVPV  194 (227)
T ss_dssp             --GGGCCGG-GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred             --cccCCCc-CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEEE
Confidence              1111111 13699998776655 4   578889999999998863

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.56  E-value=0.026  Score=59.00  Aligned_cols=89  Identities=18%  Similarity=0.014  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.+|...++.++..|++|++.++++++. .+.+.|+..+    +     +.+.+.    ..|+|+-++.
T Consensus       141 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~----~-----l~ell~----~aDvVvl~~P  205 (313)
T 2ekl_A          141 AGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAV----S-----LEELLK----NSDVISLHVT  205 (313)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEEC----C-----HHHHHH----HCSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceec----C-----HHHHHh----hCCEEEEecc
Confidence            7899999999 9999999999999999999999887764 4677887531    1     222333    3699998887


Q ss_pred             cc--hHHHH-HHHHHHhccccceEEEe
Q psy14589        190 DP--VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~--~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                      ..  +...+ +..++.+++++.+|-++
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lIn~a  232 (313)
T 2ekl_A          206 VSKDAKPIIDYPQFELMKDNVIIVNTS  232 (313)
T ss_dssp             CCTTSCCSBCHHHHHHSCTTEEEEESS
T ss_pred             CChHHHHhhCHHHHhcCCCCCEEEECC
Confidence            43  10002 46678899887766654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=95.56  E-value=0.0097  Score=62.27  Aligned_cols=79  Identities=11%  Similarity=-0.053  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH----HHHHhC------CCc-EE--EeCCccchhHHHHHHHh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV----AKAYGL------GAD-YV--VDHTIRELDRFANQILS  176 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~----~~a~~L------GAd-~v--Id~~~~~~~d~~~~i~~  176 (655)
                      +|.+|+|+||+||||..+++.....|++|+.++++.++.    +.++.+      |.. .+  .|.++.  +++.+.+.+
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~--~~v~~~~~~   78 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS--KSVAAARER   78 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH--HHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH--HHHHHHHHH
Confidence            367899999999999999988888899887766543221    122221      222 22  244442  234444444


Q ss_pred             c-CCCeeEEEeCCCc
Q psy14589        177 Y-GSELDADHPGFTD  190 (655)
Q Consensus       177 ~-~~gvDvV~D~vG~  190 (655)
                      . .+++|+++.++|.
T Consensus        79 ~~~g~iD~lVnnAG~   93 (327)
T 1jtv_A           79 VTEGRVDVLVCNAGL   93 (327)
T ss_dssp             CTTSCCSEEEECCCC
T ss_pred             HhcCCCCEEEECCCc
Confidence            3 2379999999874

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.55  E-value=0.037  Score=57.01  Aligned_cols=97  Identities=12%  Similarity=-0.037  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhcCC
Q psy14589        107 YTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       107 l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      + ++|++||-.|+  |.|..+..+++..|++|++++.+++.++.+++    .|..   .++...-.   ++    .-..+
T Consensus       115 ~-~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~----~~~~~  184 (312)
T 3vc1_A          115 A-GPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML---DT----PFDKG  184 (312)
T ss_dssp             C-CTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT---SC----CCCTT
T ss_pred             C-CCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh---cC----CCCCC
Confidence            6 78999999997  56888889998889999999999988777653    4532   22221110   10    00123


Q ss_pred             CeeEEEeCCCcc---hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP---VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~---~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+|+|+..-.-.   ..+.++.+.++|++||+++++.
T Consensus       185 ~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          185 AVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            799997532211   2234889999999999999875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.54  E-value=0.016  Score=60.00  Aligned_cols=77  Identities=14%  Similarity=0.011  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HHHHhC-CCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AKAYGL-GADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~a~~L-GAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+.+|||+||+|+||..+++.+...|.+|+++++++.+. +.+.++ ++..+ .|..+.  +++.+.+..  ..+|+|+.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~--~~~~~~~~~--~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADH--ALVNQLIGD--LQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCH--HHHHHHHHH--HCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCH--HHHHHHHhc--cCCcEEEE
Confidence            578999999999999999988888899999998865321 112222 22222 233332  233333332  14899999


Q ss_pred             CCCc
Q psy14589        187 GFTD  190 (655)
Q Consensus       187 ~vG~  190 (655)
                      ++|.
T Consensus        96 ~A~~   99 (333)
T 2q1w_A           96 TAAS   99 (333)
T ss_dssp             CCCC
T ss_pred             Ccee
Confidence            9875

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.53  E-value=0.0081  Score=59.50  Aligned_cols=97  Identities=12%  Similarity=0.003  Sum_probs=64.7

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhcC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~~  178 (655)
                      .+ ++|++||-.|+  |.|..+..+++..|++|++++.+++.++.+++    .|.+   .++...-.   ++.     ..
T Consensus        33 ~~-~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~---~~~-----~~  101 (256)
T 1nkv_A           33 RM-KPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA---GYV-----AN  101 (256)
T ss_dssp             CC-CTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT---TCC-----CS
T ss_pred             CC-CCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH---hCC-----cC
Confidence            45 78999999998  44778899999889999999999987777643    4532   22221111   110     12


Q ss_pred             CCeeEEEeCCCc----chHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTD----PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~----~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+|+|+-.-.-    +....++.+.++|++||++++..
T Consensus       102 ~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          102 EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            369999852111    11134788888999999998864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=95.52  E-value=0.058  Score=56.89  Aligned_cols=36  Identities=8%  Similarity=-0.085  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecChH
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGK-AYGLTVFASVGCPV  146 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk-~~Ga~Viat~~s~~  146 (655)
                      +.+|||+||+|.||..+++... ..|.+|++++++..
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            4589999999999999998776 88999999987654

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.47  E-value=0.019  Score=57.37  Aligned_cols=75  Identities=11%  Similarity=-0.048  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589        110 EPDTLFIIGA----------------NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus       110 ~Gd~VLI~Ga----------------sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~  173 (655)
                      .|.+|+|+||                ||++|.+.++.+...||+|+.+.+.. .++.  ..|. .++|..+.  .++.+.
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~-~l~~--~~g~-~~~dv~~~--~~~~~~   80 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV-SLPT--PPFV-KRVDVMTA--LEMEAA   80 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC-CCCC--CTTE-EEEECCSH--HHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc-cccc--CCCC-eEEccCcH--HHHHHH
Confidence            6899999999                69999999999999999998886643 1110  2233 45676553  245555


Q ss_pred             HHhcCCCeeEEEeCCCc
Q psy14589        174 ILSYGSELDADHPGFTD  190 (655)
Q Consensus       174 i~~~~~gvDvV~D~vG~  190 (655)
                      +.+..+++|+++.++|-
T Consensus        81 v~~~~~~~Dili~~Aav   97 (226)
T 1u7z_A           81 VNASVQQQNIFIGCAAV   97 (226)
T ss_dssp             HHHHGGGCSEEEECCBC
T ss_pred             HHHhcCCCCEEEECCcc
Confidence            55544578998888763

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.47  E-value=0.02  Score=60.62  Aligned_cols=89  Identities=11%  Similarity=-0.048  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||...++.++.+|++|++.++++++ +.+.+.|++.    .     ++.+.+.    ..|+|+-++.
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~-----~l~ell~----~aDvV~l~~P  228 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ----L-----PLEEIWP----LCDFITVHTP  228 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE----C-----CHHHHGG----GCSEEEECCC
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee----C-----CHHHHHh----cCCEEEEecC
Confidence            7899999999 999999999999999999999987665 4667888753    1     1222222    4799998886


Q ss_pred             cc--hHHHH-HHHHHHhccccceEEEe
Q psy14589        190 DP--VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~--~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                      ..  +...+ ...++.+++++.+|-++
T Consensus       229 ~t~~t~~li~~~~l~~mk~gailIN~a  255 (335)
T 2g76_A          229 LLPSTTGLLNDNTFAQCKKGVRVVNCA  255 (335)
T ss_dssp             CCTTTTTSBCHHHHTTSCTTEEEEECS
T ss_pred             CCHHHHHhhCHHHHhhCCCCcEEEECC
Confidence            54  10112 46778899887766654

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=95.47  E-value=0.0077  Score=62.97  Aligned_cols=99  Identities=15%  Similarity=0.059  Sum_probs=63.7

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHhC----C-------------CcEEEeCCccc
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYGL----G-------------ADYVVDHTIRE  166 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~L----G-------------Ad~vId~~~~~  166 (655)
                      .+ .+|++||-.|+ |. |.+++.+++..|  .+|++++.+++..+.+++.    |             --.++...-. 
T Consensus       102 ~~-~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~-  177 (336)
T 2b25_A          102 DI-NPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDIS-  177 (336)
T ss_dssp             TC-CTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTT-
T ss_pred             CC-CCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChH-
Confidence            45 78999999998 43 788888999876  6899999999887777542    1             1122211110 


Q ss_pred             hhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        167 LDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       167 ~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        +....+.  .+.+|+|+-....+. ..+..+.++|++||+++++.
T Consensus       178 --~~~~~~~--~~~fD~V~~~~~~~~-~~l~~~~~~LkpgG~lv~~~  219 (336)
T 2b25_A          178 --GATEDIK--SLTFDAVALDMLNPH-VTLPVFYPHLKHGGVCAVYV  219 (336)
T ss_dssp             --CCC---------EEEEEECSSSTT-TTHHHHGGGEEEEEEEEEEE
T ss_pred             --HcccccC--CCCeeEEEECCCCHH-HHHHHHHHhcCCCcEEEEEe
Confidence              1100111  125999986655541 12788999999999999764

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.46  E-value=0.07  Score=51.90  Aligned_cols=102  Identities=10%  Similarity=0.005  Sum_probs=64.1

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ...+ ++|++||-.|+  |.|..+..+++..|  .+|++++.+++..+.++    ...--.++...-.   +. ......
T Consensus        68 ~~~~-~~~~~vLDlG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~---~~-~~~~~~  140 (227)
T 1g8a_A           68 NFPI-KPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDAT---KP-EEYRAL  140 (227)
T ss_dssp             CCCC-CTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTT---CG-GGGTTT
T ss_pred             hcCC-CCCCEEEEEec--cCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCC---Cc-chhhcc
Confidence            3445 78999999998  34888889998875  69999999986555443    2311222221111   10 001111


Q ss_pred             CCCeeEEEeCCCcch-HHH-HHHHHHHhccccceEEE
Q psy14589        178 GSELDADHPGFTDPV-YRA-RRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~D~vG~~~-~~~-l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+|+|+-....+. .+. +..+.+.|++||+++++
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            236999986655442 123 67888999999998876

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.44  E-value=0.045  Score=57.37  Aligned_cols=75  Identities=13%  Similarity=-0.003  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC---hHHHHHHH-h----CCC-cEEEeCCccchhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGC---PVGVAKAY-G----LGA-DYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s---~~k~~~a~-~----LGA-d~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      .|.+|+|+|+ ||+|.+++..++..|+ +|+++.|+   .+|.+.+. +    .|. ..++++.+.  +++.+.+.    
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~--~~l~~~l~----  225 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH--EQLRKEIA----  225 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH--HHHHHHHH----
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH--HHHHhhhc----
Confidence            7999999998 9999999988888999 89999998   66655442 2    332 234555431  13434343    


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      .+|+|++|++..
T Consensus       226 ~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ESVIFTNATGVG  237 (315)
T ss_dssp             TCSEEEECSSTT
T ss_pred             CCCEEEECccCC
Confidence            579999998643

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=95.42  E-value=0.063  Score=55.21  Aligned_cols=76  Identities=16%  Similarity=0.057  Sum_probs=49.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--H---HHHHHHhCCCcEEE--eCCccchhHHHHHHHhcCCCeeEE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP--V---GVAKAYGLGADYVV--DHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~--~---k~~~a~~LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      .+|||+||+|.||..+++.+...|.+|++++++.  .   ..+.+...+--.++  |..+.  +++.+.+...  ++|+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~--~~~~~~~~~~--~~d~v   77 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK--NDVTRLITKY--MPDSC   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH--HHHHHHHHHH--CCSEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCH--HHHHHHHhcc--CCCEE
Confidence            3799999999999999988888899999998632  1   12233333422233  33332  2344444321  48999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus        78 ih~A~~~   84 (347)
T 1orr_A           78 FHLAGQV   84 (347)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9999853

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=95.41  E-value=0.04  Score=56.92  Aligned_cols=35  Identities=23%  Similarity=0.215  Sum_probs=31.0

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecC
Q psy14589        110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGC  144 (655)
Q Consensus       110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s  144 (655)
                      .|++++|+||  +||||..+++.....|++|++++++
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            6889999999  8999999988777789999998764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=95.41  E-value=0.035  Score=57.98  Aligned_cols=76  Identities=9%  Similarity=-0.008  Sum_probs=44.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH--HHHHhC-------CCc-EEE--eCCccchhHHHHHHHhcC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV--AKAYGL-------GAD-YVV--DHTIRELDRFANQILSYG  178 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~--~~a~~L-------GAd-~vI--d~~~~~~~d~~~~i~~~~  178 (655)
                      +.+|+|+||+|+||..+++.+...|.+|+++++++++.  +.+..+       +.. .++  |..+.  +++.+.+... 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT--SNLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCH--HHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCH--HHHHHHHHhc-
Confidence            36899999999999999988878899999998876531  222222       111 112  33222  2333334332 


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                       ++|+|+.++|.
T Consensus        78 -~~d~vih~A~~   88 (372)
T 1db3_A           78 -QPDEVYNLGAM   88 (372)
T ss_dssp             -CCSEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             47999998874

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=95.38  E-value=0.044  Score=58.10  Aligned_cols=89  Identities=15%  Similarity=0.069  Sum_probs=58.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      .+|+|.|| |.||..+++.++. ...|.+.+++.++++.+++......+|..+.  +.+.+.++    +.|+|+.|+|..
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~--~~l~~~~~----~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNF--DKLVEVMK----EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCH--HHHHHHHT----TCSEEEECCCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCH--HHHHHHHh----CCCEEEEecCCc
Confidence            47999999 9999998877643 5688888899999888877654444555442  23333332    689999999877


Q ss_pred             hHHHHHHHHHHhccccceEE
Q psy14589        192 VYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       192 ~~~~l~~~l~~l~~gGrlv~  211 (655)
                      .   -...++++-..|+-++
T Consensus        89 ~---~~~v~~~~~~~g~~yv  105 (365)
T 3abi_A           89 L---GFKSIKAAIKSKVDMV  105 (365)
T ss_dssp             G---HHHHHHHHHHHTCEEE
T ss_pred             c---cchHHHHHHhcCcceE
Confidence            3   2233333333444443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.37  E-value=0.047  Score=56.75  Aligned_cols=75  Identities=12%  Similarity=0.018  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH----HHHHHH-h------CCCcEE-EeCCccchhHHHHHHHhc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV----GVAKAY-G------LGADYV-VDHTIRELDRFANQILSY  177 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~----k~~~a~-~------LGAd~v-Id~~~~~~~d~~~~i~~~  177 (655)
                      .+.+|||+||+|.||..+++.+...|.+|+++++++.    +.+.+. .      -+...+ .|..+.  +++.+.+   
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~---  100 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL--DDCNNAC---  100 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH--HHHHHHH---
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH--HHHHHHh---
Confidence            4678999999999999999888888999999988642    333322 1      232222 233332  1232222   


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                       .++|+|+.++|.
T Consensus       101 -~~~d~vih~A~~  112 (352)
T 1sb8_A          101 -AGVDYVLHQAAL  112 (352)
T ss_dssp             -TTCSEEEECCSC
T ss_pred             -cCCCEEEECCcc
Confidence             278999999984

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=95.36  E-value=0.025  Score=57.68  Aligned_cols=74  Identities=18%  Similarity=0.079  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHH---HHHHHhCCC--c--EEE--eCCccchhHHHHHHHhcCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVG---VAKAYGLGA--D--YVV--DHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k---~~~a~~LGA--d--~vI--d~~~~~~~d~~~~i~~~~~g  180 (655)
                      |++|||+||+|.||..+++.+...|.+|+++++ ++++   .+.+.++..  .  .++  |..+.  +++.+.+.    +
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~----~   74 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNP--DSFAAAIE----G   74 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCG--GGGHHHHT----T
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCH--HHHHHHHc----C
Confidence            578999999999999999888888999999887 5432   222333321  1  122  33332  23333332    6


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+|+.+++.
T Consensus        75 ~d~vih~A~~   84 (322)
T 2p4h_X           75 CVGIFHTASP   84 (322)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEEcCCc
Confidence            8999998753

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.34  E-value=0.069  Score=51.93  Aligned_cols=96  Identities=13%  Similarity=0.011  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCC-cEEEeCCccchhHHHHHHHhc-CCCee
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGA-DYVVDHTIRELDRFANQILSY-GSELD  182 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGA-d~vId~~~~~~~d~~~~i~~~-~~gvD  182 (655)
                      ++|++||=.|+ |..|..++.+++..+.+|++++.+++.++.++    ..|. -.++.....   .+    ... .+.+|
T Consensus        54 ~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~---~~----~~~~~~~fD  125 (230)
T 3evz_A           54 RGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGG---II----KGVVEGTFD  125 (230)
T ss_dssp             CSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSC---SS----TTTCCSCEE
T ss_pred             CCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCch---hh----hhcccCcee
Confidence            68999998888 43677777888777889999999998777765    3453 233322210   00    011 13799


Q ss_pred             EEEeCCC----------------------cc-hHHHHHHHHHHhccccceEEE
Q psy14589        183 ADHPGFT----------------------DP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       183 vV~D~vG----------------------~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+-...                      .. ..+.++.+.+.|++||+++++
T Consensus       126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            9984311                      11 123366777778888887764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=95.34  E-value=0.079  Score=54.41  Aligned_cols=75  Identities=13%  Similarity=-0.018  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecCh--HHHHHHHhC----CCcEE-EeCCccchhHHHHHHHhcCCCe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCP--VGVAKAYGL----GADYV-VDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~--~k~~~a~~L----GAd~v-Id~~~~~~~d~~~~i~~~~~gv  181 (655)
                      +.+|||+||+|+||..+++.....|  .+|++++++.  .+.+.+.++    ++..+ .|..+.  +.+.+.+    .++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~----~~~   76 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADY--ELVKELV----RKV   76 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCH--HHHHHHH----HTC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCH--HHHHHHh----hCC
Confidence            4679999999999999987766666  7999998753  122222222    22211 233332  2233333    368


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+|+.++|..
T Consensus        77 d~vih~A~~~   86 (336)
T 2hun_A           77 DGVVHLAAES   86 (336)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCc
Confidence            9999999853

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.33  E-value=0.035  Score=56.53  Aligned_cols=74  Identities=11%  Similarity=0.017  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      +|.+|+|+|+ ||+|.++++.+...|++|+++.+++++.+.+ +++++..-++..+.  +++    .+  +++|+++.++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~--~~~----~~--~~~DivVn~t  188 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM--DEL----EG--HEFDLIINAT  188 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS--GGG----TT--CCCSEEEECC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH--HHh----cc--CCCCEEEECC
Confidence            7899999999 8999999999989999999999998886544 45554100111111  111    11  4789999999


Q ss_pred             Ccch
Q psy14589        189 TDPV  192 (655)
Q Consensus       189 G~~~  192 (655)
                      |...
T Consensus       189 ~~~~  192 (271)
T 1nyt_A          189 SSGI  192 (271)
T ss_dssp             SCGG
T ss_pred             CCCC
Confidence            8664

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.30  E-value=0.042  Score=56.89  Aligned_cols=73  Identities=8%  Similarity=-0.082  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHH-HhCCCc--EEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKA-YGLGAD--YVVDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a-~~LGAd--~vId~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      .|.+|+|.|+ |++|.+++..+...|+ +|++..++++|.+.+ .++++.  .+++.     +++    .+...++|+|+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~-----~~~----~~~~~~aDivI  209 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL-----AEA----ETRLAEYDIII  209 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH-----HHH----HHTGGGCSEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH-----HHH----HhhhccCCEEE
Confidence            7889999999 9999999998888998 899999998886544 566652  23321     122    22223689999


Q ss_pred             eCCCcch
Q psy14589        186 PGFTDPV  192 (655)
Q Consensus       186 D~vG~~~  192 (655)
                      .|++...
T Consensus       210 n~t~~~~  216 (297)
T 2egg_A          210 NTTSVGM  216 (297)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9998654

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.29  E-value=0.015  Score=58.72  Aligned_cols=97  Identities=9%  Similarity=0.012  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCC--------------------cEEEeCCccch
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGA--------------------DYVVDHTIREL  167 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGA--------------------d~vId~~~~~~  167 (655)
                      ++|.+||..|+  |.|..+..+|+. |++|++++.|+.-++.+++ .+.                    .. |+....  
T Consensus        67 ~~~~~vLD~GC--G~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~--  140 (252)
T 2gb4_A           67 QSGLRVFFPLC--GKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS-ISLYCC--  140 (252)
T ss_dssp             CCSCEEEETTC--TTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS-EEEEES--
T ss_pred             CCCCeEEEeCC--CCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc-eEEEEC--
Confidence            57889999998  456777888875 9999999999998888853 331                    11 111111  


Q ss_pred             hHHHHHHHhc-CCCeeEEEeCCC-----cc-hHHHHHHHHHHhccccceEEEe
Q psy14589        168 DRFANQILSY-GSELDADHPGFT-----DP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       168 ~d~~~~i~~~-~~gvDvV~D~vG-----~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       |+.+ +... .+.+|+|++...     .+ ....++...++|++||+++++.
T Consensus       141 -D~~~-l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          141 -SIFD-LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             -CTTT-GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             -cccc-CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence             1111 1111 147999997432     11 1123677888999999998765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.29  E-value=0.019  Score=58.55  Aligned_cols=69  Identities=9%  Similarity=-0.097  Sum_probs=39.5

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      |.+|+|+||+|.||..+++.+...|.+|+++++++++.      + ....|..+.  +++.+.+...  ++|+|+.++|.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~-~~~~Dl~d~--~~~~~~~~~~--~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP------K-FEQVNLLDS--NAVHHIIHDF--QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHH--CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC------C-eEEecCCCH--HHHHHHHHhh--CCCEEEECCcc
Confidence            56899999999999999988888899999998765431      1 111233221  1233333322  47999998874

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=95.26  E-value=0.025  Score=54.52  Aligned_cols=97  Identities=15%  Similarity=-0.026  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++++||-.|+  |.|..++.+++..  +.+|++++.+++..+.+++    .|...-+.....   +..+.+....+ +|+
T Consensus        56 ~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~~-fD~  129 (210)
T 3c3p_A           56 QPQLVVVPGD--GLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG---DPLGIAAGQRD-IDI  129 (210)
T ss_dssp             CCSEEEEESC--GGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES---CHHHHHTTCCS-EEE
T ss_pred             CCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe---cHHHHhccCCC-CCE
Confidence            5678998887  6788888999876  6799999999988777653    343211111111   23333333344 999


Q ss_pred             EEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        184 DHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |+-..... ....++.+.+.|++||++++-
T Consensus       130 v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          130 LFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             EEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence            87433222 223478888999999988764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.25  E-value=0.06  Score=51.99  Aligned_cols=69  Identities=7%  Similarity=-0.033  Sum_probs=49.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CC-----CcEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LG-----ADYVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LG-----Ad~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +|+|.||+|.+|...++.....|.+|++.++++++.+.+.+ +|     .+.  .. .    ++.+.+.    ++|+|+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~-~----~~~~~~~----~~D~Vi~   70 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI--TG-M----KNEDAAE----ACDIAVL   70 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCE--EE-E----EHHHHHH----HCSEEEE
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCC--Ch-h----hHHHHHh----cCCEEEE
Confidence            68999977999998888777789999999999887766543 34     222  11 1    2333343    4799999


Q ss_pred             CCCcch
Q psy14589        187 GFTDPV  192 (655)
Q Consensus       187 ~vG~~~  192 (655)
                      ++....
T Consensus        71 ~~~~~~   76 (212)
T 1jay_A           71 TIPWEH   76 (212)
T ss_dssp             CSCHHH
T ss_pred             eCChhh
Confidence            998664

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.25  E-value=0.012  Score=60.68  Aligned_cols=73  Identities=14%  Similarity=0.061  Sum_probs=48.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh-CCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG-LGADYV-VDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~-LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +|+|+||+|.||..+++.+... |.+|+++++++++.+.+.+ .+...+ .|..+.. +.+.+.+.    ++|+|+.++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~----~~d~vih~A~   76 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS-EWIEYHVK----KCDVVLPLVA   76 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCS-HHHHHHHH----HCSEEEECBC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcH-HHHHhhcc----CCCEEEEccc
Confidence            6999999999999999888777 8999999998766543322 232222 2333210 12223332    5899999877


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      .
T Consensus        77 ~   77 (345)
T 2bll_A           77 I   77 (345)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.24  E-value=0.086  Score=58.32  Aligned_cols=80  Identities=19%  Similarity=0.138  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHH-------HHHHHhCCCcEE---EeCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVG-------VAKAYGLGADYV---VDHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k-------~~~a~~LGAd~v---Id~~~~~~~d~~~~i~~~  177 (655)
                      +++.+++|+||+||||..+++.....|+ +|+.++++...       .+.+++.|+...   .|..+.  +++.+.+.+.
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~--~~v~~~~~~i  301 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDR--ESVRELLGGI  301 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH--HHHHHHHHTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCH--HHHHHHHHHH
Confidence            5789999999999999998887767799 58888887631       123456676432   244332  2344444443


Q ss_pred             --CCCeeEEEeCCCc
Q psy14589        178 --GSELDADHPGFTD  190 (655)
Q Consensus       178 --~~gvDvV~D~vG~  190 (655)
                        .+.+|+||.+.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence              2378999999884

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.24  E-value=0.018  Score=60.90  Aligned_cols=75  Identities=17%  Similarity=-0.018  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .+.+|||+||+|.||..+++.+...|.+|+++++++.+.......+...+ .|..+.  +++.+.+    .++|+|+.++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~----~~~d~Vih~A  101 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVM--ENCLKVT----EGVDHVFNLA  101 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSH--HHHHHHH----TTCSEEEECC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCH--HHHHHHh----CCCCEEEECc
Confidence            46799999999999999998888889999999987654322222344332 233332  2233333    2789999998


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus       102 ~~  103 (379)
T 2c5a_A          102 AD  103 (379)
T ss_dssp             CC
T ss_pred             ee
Confidence            74

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.23  E-value=0.073  Score=57.38  Aligned_cols=96  Identities=9%  Similarity=-0.075  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc-EEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD-YVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd-~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++|++||=.|+  |.|..++.+|+. |++|++++.++..++.+++    .|.+ .+.   ..   |..+.+....+.+|+
T Consensus       213 ~~g~~VLDlg~--GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~---~~---D~~~~l~~~~~~fD~  283 (393)
T 4dmg_A          213 RPGERVLDVYS--YVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIR---HG---EALPTLRGLEGPFHH  283 (393)
T ss_dssp             CTTCEEEEESC--TTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEE---ES---CHHHHHHTCCCCEEE
T ss_pred             cCCCeEEEccc--chhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEE---Ec---cHHHHHHHhcCCCCE
Confidence            56999997675  566677777764 8899999999988877753    3544 343   21   444445444335999


Q ss_pred             EEeCCCc------------c-hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTD------------P-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~------------~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+-....            . ..+.+..++++|++||+++.+.
T Consensus       284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s  326 (393)
T 4dmg_A          284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSS  326 (393)
T ss_dssp             EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            8754332            1 1134778899999999998654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.23  E-value=0.1  Score=51.18  Aligned_cols=103  Identities=10%  Similarity=-0.017  Sum_probs=66.0

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCC--CcEE--EeCCccchhHHHHHHHhc
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLG--ADYV--VDHTIRELDRFANQILSY  177 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LG--Ad~v--Id~~~~~~~d~~~~i~~~  177 (655)
                      ....+ ++|++||-.|+ | .|..+..+|+..| .+|++++.+++..+.+++.-  .+.+  +.....   +... ....
T Consensus        68 ~~~~~-~~~~~VLDlGc-G-~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~---~~~~-~~~~  140 (230)
T 1fbn_A           68 KVMPI-KRDSKILYLGA-S-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN---KPQE-YANI  140 (230)
T ss_dssp             CCCCC-CTTCEEEEESC-C-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT---CGGG-GTTT
T ss_pred             cccCC-CCCCEEEEEcc-c-CCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCC---Cccc-cccc
Confidence            33456 78999999998 4 3888899999887 59999999998777665321  1212  211110   1000 0011


Q ss_pred             CCCeeEEEeCCCcc--hHHHHHHHHHHhccccceEEE
Q psy14589        178 GSELDADHPGFTDP--VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+|+|+..+..+  ....++.+.+.|++||+++++
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            13699998665544  112377888899999998885

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.21  E-value=0.016  Score=56.57  Aligned_cols=94  Identities=12%  Similarity=-0.111  Sum_probs=64.2

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC----CCcEEEeCCccchhHHHHHHHhcCCCe
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL----GADYVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L----GAd~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .+ +++++||-.|+ | .|..+..+++. +.+|++++.+++..+.+++.    |-..++...      ..+... ..+.+
T Consensus        67 ~~-~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d------~~~~~~-~~~~f  135 (231)
T 1vbf_A           67 DL-HKGQKVLEIGT-G-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGD------GTLGYE-EEKPY  135 (231)
T ss_dssp             TC-CTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESC------GGGCCG-GGCCE
T ss_pred             CC-CCCCEEEEEcC-C-CCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECC------cccccc-cCCCc
Confidence            45 68999999998 4 48888888886 48999999999888887653    312233221      111011 12369


Q ss_pred             eEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+|+....-. .   .+.+.+.|++||++++..
T Consensus       136 D~v~~~~~~~~~---~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          136 DRVVVWATAPTL---LCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             EEEEESSBBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred             cEEEECCcHHHH---HHHHHHHcCCCcEEEEEE
Confidence            9998765444 3   467888999999998864

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.21  E-value=0.085  Score=58.21  Aligned_cols=76  Identities=11%  Similarity=0.030  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh-CCCcE-EEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG-LGADY-VVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~-LGAd~-vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+.+|+|+|+ |++|..++..+... |.+|+++++++++.+.+.+ .++.. .+|..+.  +++.+.+.    ++|+|+.
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~--~~l~~~l~----~~DvVIn   94 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDD--SALDKVLA----DNDVVIS   94 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCH--HHHHHHHH----TSSEEEE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCH--HHHHHHHc----CCCEEEE
Confidence            5778999998 99999998877776 6799999999888766543 34432 2344332  23433343    6899999


Q ss_pred             CCCcch
Q psy14589        187 GFTDPV  192 (655)
Q Consensus       187 ~vG~~~  192 (655)
                      |+|...
T Consensus        95 ~tp~~~  100 (467)
T 2axq_A           95 LIPYTF  100 (467)
T ss_dssp             CSCGGG
T ss_pred             CCchhh
Confidence            998763

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=95.20  E-value=0.47  Score=51.48  Aligned_cols=209  Identities=11%  Similarity=-0.007  Sum_probs=108.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH----------HH-HHHhCCCcEEEeCCccch--hHH--HHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG----------VA-KAYGLGADYVVDHTIREL--DRF--ANQI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k----------~~-~a~~LGAd~vId~~~~~~--~d~--~~~i  174 (655)
                      .|.+|.|.|. |.||...++.++.+|.+|++.+++++.          ++ .++  .+|.|+..-....  ..+  .+.+
T Consensus       155 ~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~--~aDvV~lhvPlt~~T~~li~~~~l  231 (416)
T 3k5p_A          155 RGKTLGIVGY-GNIGSQVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLK--TSDVVSLHVPSSKSTSKLITEAKL  231 (416)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHH--HCSEEEECCCC-----CCBCHHHH
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHh--hCCEEEEeCCCCHHHhhhcCHHHH
Confidence            6899999999 999999999999999999999865321          11 112  3566654322100  001  1122


Q ss_pred             HhcCCCeeEEEeCCCcc--hHHHHHHHHHHhccccceEEEeeccch-------------hhhhhhhhh---hhhhhhhhh
Q psy14589        175 LSYGSELDADHPGFTDP--VYRARRKYFADLAFNYKHFFFFFFFFF-------------FFFFFFFFF---YFFFFFFFF  236 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v~~~~~~-------------~~~~~~~~~---~~~~~~~~~  236 (655)
                      .....+ -+++|+.-+.  .   .+...++|+ .|++--.+. +-|             |++..==..   -.-..+.-.
T Consensus       232 ~~mk~g-ailIN~aRG~vvd---~~aL~~aL~-~g~i~gAal-DVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea  305 (416)
T 3k5p_A          232 RKMKKG-AFLINNARGSDVD---LEALAKVLQ-EGHLAGAAI-DVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEA  305 (416)
T ss_dssp             HHSCTT-EEEEECSCTTSBC---HHHHHHHHH-TTSEEEEEE-CCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHH
T ss_pred             hhCCCC-cEEEECCCChhhh---HHHHHHHHH-cCCccEEEe-CCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHH
Confidence            222222 4667766444  3   345555664 345443321 100             111000000   000000000


Q ss_pred             hh---------hhheeecccccc----ccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCc
Q psy14589        237 FY---------FFYFLLLSQPLI----QSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIEN  303 (655)
Q Consensus       237 ~~---------~~~F~ll~~p~~----~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~  303 (655)
                      .-         ...|+--..+..    +....+...+...+.+...| .||-|.++-+.|++++||+....++-    .+
T Consensus       306 ~~~~~~~~~~nl~~~l~~g~~~~~Vn~p~~~~~~~~~~~r~~~~h~n-~p~~~~~i~~~~~~~~~ni~~~~~~~----~~  380 (416)
T 3k5p_A          306 QERIGTEVTRKLVEYSDVGSTVGAVNFPQVQLPPRPTGTRFMHVHEN-RPGILNSLMNVFSHHHINIASQFLQT----DG  380 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCTTBSSSCCCCCCCCSSSEEEEEEECC-CTTHHHHHHHHHHHTTCCEEEEEEEE----CS
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCceeeCCCcCCCCCCCceEEEEEecC-CccHHHHHHHHHHHcCCCHHHHhccC----CC
Confidence            00         001110011110    00111122234566666677 89999999999999999998876543    23


Q ss_pred             ceEE-EEEecC-CchHHHHHHHHHccCCcEE
Q psy14589        304 NYEF-MVECAP-GGDLSSVIESLRSSCSYIN  332 (655)
Q Consensus       304 ~Y~F-fVd~eg-~~~v~~~l~~L~~~~~~v~  332 (655)
                      +|-| .+|++. .+.-++++++|+..-..++
T Consensus       381 ~~~y~~~d~~~~~~~~~~~~~~l~~~~~~~~  411 (416)
T 3k5p_A          381 EVGYLVMEADGVGEASDAVLQEIREIPGTIR  411 (416)
T ss_dssp             SCEEEEEEECCCHHHHHHHHHHHHTSTTEEE
T ss_pred             ceEEEEEEecCCCCCcHHHHHHHHhCCCEEE
Confidence            3433 459984 3444678888887755443

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.18  E-value=0.03  Score=55.36  Aligned_cols=101  Identities=10%  Similarity=-0.106  Sum_probs=66.8

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHH
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQIL  175 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~  175 (655)
                      ....+ ++|++||-.|+  |.|..+..+++..+.+|++++.+++..+.+++    .|..   .++...-.   ++    .
T Consensus        40 ~l~~~-~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~---~~----~  109 (257)
T 3f4k_A           40 FINEL-TDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD---NL----P  109 (257)
T ss_dssp             TSCCC-CTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT---SC----S
T ss_pred             HHhcC-CCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh---hC----C
Confidence            33456 78999999998  46889999999988899999999987777643    4532   22221111   11    0


Q ss_pred             hcCCCeeEEEeCCCc---chHHHHHHHHHHhccccceEEEe
Q psy14589        176 SYGSELDADHPGFTD---PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~---~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      -..+.+|+|+-...-   +..+.++.+.++|++||++++..
T Consensus       110 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          110 FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            012379999642111   12234788888999999999875

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.17  E-value=0.015  Score=58.18  Aligned_cols=98  Identities=7%  Similarity=-0.135  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHH----HHHhCCCc---EEEeCCccchhHHHHHHHhc--C
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVA----KAYGLGAD---YVVDHTIRELDRFANQILSY--G  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~----~a~~LGAd---~vId~~~~~~~d~~~~i~~~--~  178 (655)
                      ++++||=.|+  |.|..++.+|+..  +++|++++.+++..+    .++..|..   .++.-..   .+......+.  .
T Consensus        60 ~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda---~~~l~~~~~~~~~  134 (242)
T 3r3h_A           60 RAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA---LDTLHSLLNEGGE  134 (242)
T ss_dssp             TCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH---HHHHHHHHHHHCS
T ss_pred             CcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH---HHHHHHHhhccCC
Confidence            5678998887  5566777888876  579999999886433    34455653   2222111   1222222111  3


Q ss_pred             CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+|+|+-..... ..+.++.+.+.|++||.+++-
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  169 (242)
T 3r3h_A          135 HQFDFIFIDADKTNYLNYYELALKLVTPKGLIAID  169 (242)
T ss_dssp             SCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence            4799987444333 324478899999999998874

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.14  E-value=0.088  Score=56.42  Aligned_cols=104  Identities=16%  Similarity=0.002  Sum_probs=71.0

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      ....+ +++.+||=.|+  |.|..+..+++ .|.+|++++.+++-.+.+++.|.......-..   +..+.+....+.+|
T Consensus       101 ~~~~~-~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~---~~~~~l~~~~~~fD  173 (416)
T 4e2x_A          101 ATELT-GPDPFIVEIGC--NDGIMLRTIQE-AGVRHLGFEPSSGVAAKAREKGIRVRTDFFEK---ATADDVRRTEGPAN  173 (416)
T ss_dssp             HTTTC-SSSCEEEEETC--TTTTTHHHHHH-TTCEEEEECCCHHHHHHHHTTTCCEECSCCSH---HHHHHHHHHHCCEE
T ss_pred             HHhCC-CCCCEEEEecC--CCCHHHHHHHH-cCCcEEEECCCHHHHHHHHHcCCCcceeeech---hhHhhcccCCCCEE
Confidence            44455 68899998897  34667767766 58899999999999999998887765433221   22223322234799


Q ss_pred             EEEeCCCc----chHHHHHHHHHHhccccceEEEe
Q psy14589        183 ADHPGFTD----PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       183 vV~D~vG~----~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+-.-.-    +..+.++.+.++|++||++++..
T Consensus       174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~  208 (416)
T 4e2x_A          174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFED  208 (416)
T ss_dssp             EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            99854321    11234788889999999998764

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.13  E-value=0.072  Score=52.30  Aligned_cols=94  Identities=12%  Similarity=0.028  Sum_probs=65.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPG  187 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~  187 (655)
                      ++|++||=.|+  |.|..+..+++. |++|++++.+++..+.+++.  ..++..      +..+...... +.+|+|+-.
T Consensus        40 ~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~--~~~~~~------d~~~~~~~~~~~~fD~i~~~  108 (240)
T 3dli_A           40 KGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCEGK--FNVVKS------DAIEYLKSLPDKYLDGVMIS  108 (240)
T ss_dssp             TTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT--SEEECS------CHHHHHHTSCTTCBSEEEEE
T ss_pred             cCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh--cceeec------cHHHHhhhcCCCCeeEEEEC
Confidence            68899998897  456677777775 89999999999988888876  333322      2333333332 379998753


Q ss_pred             -----CCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        188 -----FTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       188 -----vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                           ++.+ ....++.+.++|++||++++..
T Consensus       109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A          109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence                 2322 1244788889999999998865

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.12  E-value=0.099  Score=58.10  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=52.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChH-------HHHHHHhCCCcEEE---eCCccchhHHHHHHHhcC--
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPV-------GVAKAYGLGADYVV---DHTIRELDRFANQILSYG--  178 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~-------k~~~a~~LGAd~vI---d~~~~~~~d~~~~i~~~~--  178 (655)
                      .++||+|++||||..+++.....|+ +|+.+.++..       ..+.+++.|+...+   |.++.  +++.+.+.+..  
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~--~~v~~~~~~i~~~  317 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADR--EALAALLAELPED  317 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH--HHHHHHHHTCCTT
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCH--HHHHHHHHHHHHh
Confidence            8999999999999998887777899 7888877631       12334567765432   33332  24444444432  


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+|+.+.|.
T Consensus       318 g~ld~vVh~AGv  329 (496)
T 3mje_A          318 APLTAVFHSAGV  329 (496)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCeEEEECCcc
Confidence            379999999884

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.11  E-value=0.097  Score=52.86  Aligned_cols=77  Identities=14%  Similarity=0.063  Sum_probs=53.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY-GSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~  190 (655)
                      +|+|.|++|.+|...++.+... |.++++.....+..+.+...++|.+||.+.+.  ...+.+... ..++++|+.++|-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~--a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPD--VVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTT--THHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChH--HHHHHHHHHHHcCCCEEEcCCCC
Confidence            6899999999999999988766 88887665433334444445799999988752  222222221 2378999999985


Q ss_pred             c
Q psy14589        191 P  191 (655)
Q Consensus       191 ~  191 (655)
                      .
T Consensus        80 ~   80 (245)
T 1p9l_A           80 T   80 (245)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.07  E-value=0.083  Score=53.18  Aligned_cols=35  Identities=23%  Similarity=0.169  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecCh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCP  145 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~  145 (655)
                      .+.+|+|.|+ ||+|..+++.+...|+ +++.++.+.
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            4568999999 9999999998888898 788888776

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.06  E-value=0.023  Score=56.13  Aligned_cols=96  Identities=10%  Similarity=-0.008  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHH-hcCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQIL-SYGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~-~~~~  179 (655)
                      .++.+||=.|+  |.|..++.+|+.. +.+|++++.+++..+.+++    .|..   .++...      ..+.+. ...+
T Consensus        70 ~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~~~~  141 (232)
T 3ntv_A           70 NNVKNILEIGT--AIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGN------ALEQFENVNDK  141 (232)
T ss_dssp             HTCCEEEEECC--SSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC------GGGCHHHHTTS
T ss_pred             cCCCEEEEEeC--chhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC------HHHHHHhhccC
Confidence            36788998887  5677888888864 6799999999988777653    4542   233222      111222 2234


Q ss_pred             CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+|+|+-..... ..+.++.+.+.|++||++++-
T Consensus       142 ~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          142 VYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             CEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            799987544333 223467888999999998764

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.04  E-value=0.088  Score=50.75  Aligned_cols=94  Identities=11%  Similarity=-0.025  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC-CC-----------------cEEE--eCCccchh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL-GA-----------------DYVV--DHTIRELD  168 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L-GA-----------------d~vI--d~~~~~~~  168 (655)
                      ++|.+||..|+  |.|..+..+|+. |++|++++.|++-++.+++. +.                 -.++  |..+.   
T Consensus        21 ~~~~~vLD~GC--G~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l---   94 (203)
T 1pjz_A           21 VPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL---   94 (203)
T ss_dssp             CTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS---
T ss_pred             CCCCEEEEeCC--CCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC---
Confidence            67899999998  566778888886 99999999999888877642 11                 1111  21111   


Q ss_pred             HHHHHHHhcCCCeeEEEeCCCc-----c-hHHHHHHHHHHhccccceEEEe
Q psy14589        169 RFANQILSYGSELDADHPGFTD-----P-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       169 d~~~~i~~~~~gvDvV~D~vG~-----~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ...+ .    +.+|+|++...-     + ....++...++|++||+++++.
T Consensus        95 ~~~~-~----~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           95 TARD-I----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             THHH-H----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             Cccc-C----CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1110 0    159999973221     1 1123567888999999966654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=95.02  E-value=0.043  Score=56.73  Aligned_cols=35  Identities=26%  Similarity=0.337  Sum_probs=30.8

Q ss_pred             CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecC
Q psy14589        110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGC  144 (655)
Q Consensus       110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s  144 (655)
                      .|++++|+||  +||||..+++.....|++|++++++
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            6889999998  8999999988777789999998754

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.00  E-value=0.091  Score=54.78  Aligned_cols=90  Identities=14%  Similarity=0.017  Sum_probs=62.8

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCc-EEEeCCccchhHHHH-HHHhcCCCeeEEEe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGAD-YVVDHTIRELDRFAN-QILSYGSELDADHP  186 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd-~vId~~~~~~~d~~~-~i~~~~~gvDvV~D  186 (655)
                      ..+|.|.|+ |.+|...++..+..|.  +|++.++++++.+.+++.|+. .+.+.       ..+ .+    .+.|+|+-
T Consensus        33 ~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~-------~~~~~~----~~aDvVil  100 (314)
T 3ggo_A           33 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS-------IAKVED----FSPDFVML  100 (314)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC-------TTGGGG----GCCSEEEE
T ss_pred             CCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC-------HHHHhh----ccCCEEEE
Confidence            468999998 9999999998888998  999999999999999999873 22211       111 11    15799999


Q ss_pred             CCCcchH-HHHHHHHHHhccccceEEE
Q psy14589        187 GFTDPVY-RARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       187 ~vG~~~~-~~l~~~l~~l~~gGrlv~v  212 (655)
                      |+..... +.+++....++++..++.+
T Consensus       101 avp~~~~~~vl~~l~~~l~~~~iv~d~  127 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSEDATVTDQ  127 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTTCEEEEC
T ss_pred             eCCHHHHHHHHHHHhhccCCCcEEEEC
Confidence            9987741 2233444455555444444

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.97  E-value=0.044  Score=57.61  Aligned_cols=89  Identities=17%  Similarity=0.115  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.+|...++.++..|.+|++.++++++.+.+.+.|+..+    +     +.+.+.    ..|+|+.++.
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~-----l~e~l~----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV----S-----TPELAA----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC----C-----HHHHHH----HCSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC----C-----HHHHHh----hCCEEEEeCC
Confidence            6889999999 999999999999999999999987766666777776432    1     222233    3699999987


Q ss_pred             cc--hHHHH-HHHHHHhccccceEEE
Q psy14589        190 DP--VYRAR-RKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~--~~~~l-~~~l~~l~~gGrlv~v  212 (655)
                      ..  +...+ ...++.++++..+|-+
T Consensus       220 ~~~~t~~~i~~~~~~~mk~gailIn~  245 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKETAVFINI  245 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTCEEEEC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEEC
Confidence            53  10012 4566778877655543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=94.97  E-value=0.012  Score=59.83  Aligned_cols=37  Identities=19%  Similarity=-0.004  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV  146 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~  146 (655)
                      .+.+|||+||+|.||..+++.+...|.+|+++++++.
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            4679999999999999999988888999999998764

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.96  E-value=0.1  Score=52.84  Aligned_cols=89  Identities=16%  Similarity=0.036  Sum_probs=60.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS-ELDADHPGF  188 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~v  188 (655)
                      .+|.|.|+ |.+|...++..+..|.  +|++.++++++.+.+++.|+..... .+     ..+.+    . +.|+|+.|+
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~-~~-----~~~~~----~~~aDvVilav   70 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-TS-----IAKVE----DFSPDFVMLSS   70 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-SC-----GGGGG----GTCCSEEEECS
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc-CC-----HHHHh----cCCCCEEEEcC
Confidence            36899998 9999999998888887  8999999999988888888742111 11     11111    2 479999999


Q ss_pred             CcchH-HHHHHHHHHhccccceEE
Q psy14589        189 TDPVY-RARRKYFADLAFNYKHFF  211 (655)
Q Consensus       189 G~~~~-~~l~~~l~~l~~gGrlv~  211 (655)
                      ..... +.+......++++..++.
T Consensus        71 p~~~~~~v~~~l~~~l~~~~iv~~   94 (281)
T 2g5c_A           71 PVRTFREIAKKLSYILSEDATVTD   94 (281)
T ss_dssp             CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred             CHHHHHHHHHHHHhhCCCCcEEEE
Confidence            87741 223333345565544433

>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}

Probab=94.95  E-value=0.1  Score=52.94  Aligned_cols=95  Identities=16%  Similarity=0.030  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHh----CCCcE--EEeCCccchhHHHHHHHhcCCCe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYG----LGADY--VVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~----LGAd~--vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      ++|++||=.|+  |+|..++.+|+..+ .+|++++.+++..+.+++    .|.+.  ++.....   ++     ...+.+
T Consensus       118 ~~~~~VLDlgc--G~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~---~~-----~~~~~~  187 (272)
T 3a27_A          118 NENEVVVDMFA--GIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNR---DV-----ELKDVA  187 (272)
T ss_dssp             CTTCEEEETTC--TTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGG---GC-----CCTTCE
T ss_pred             CCCCEEEEecC--cCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChH---Hc-----CccCCc
Confidence            68899987776  56777788888764 599999999988777653    45432  2322111   11     113368


Q ss_pred             eEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+|+-.......+.+..+++.|++||++++..
T Consensus       188 D~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~  219 (272)
T 3a27_A          188 DRVIMGYVHKTHKFLDKTFEFLKDRGVIHYHE  219 (272)
T ss_dssp             EEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEECCcccHHHHHHHHHHHcCCCCEEEEEE
Confidence            99865443221123788999999999988654

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=94.95  E-value=0.028  Score=60.00  Aligned_cols=91  Identities=11%  Similarity=-0.015  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|.+|.|.|. |.||...++.++.+|++ |++.++++.+.+.+.+.|+..+   .     ++.+.+.    ..|+|+-++
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~---~-----~l~ell~----~aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV---E-----NIEELVA----QADIVTVNA  229 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC---S-----SHHHHHH----TCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec---C-----CHHHHHh----cCCEEEECC
Confidence            7899999999 99999999999999997 9999988766667778886431   1     2333333    469999888


Q ss_pred             Ccc--hHHHH-HHHHHHhccccceEEEe
Q psy14589        189 TDP--VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~--~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                      ...  +...+ +..++.|++++.+|-++
T Consensus       230 P~t~~t~~li~~~~l~~mk~ga~lIn~a  257 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKGAWLVNTA  257 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             CCChHHHHHhCHHHHhhCCCCCEEEECC
Confidence            763  10012 45678888887776654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=94.95  E-value=0.038  Score=55.56  Aligned_cols=61  Identities=11%  Similarity=-0.038  Sum_probs=43.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|||+||+|.||..+++.+...|.+|+++++.+              .|..+.  +.+.+.+.+.  ++|+|+.++|..
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------------~D~~d~--~~~~~~~~~~--~~d~vi~~a~~~   67 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL--------------LDITNI--SQVQQVVQEI--RPHIIIHCAAYT   67 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT--------------SCTTCH--HHHHHHHHHH--CCSEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc--------------cCCCCH--HHHHHHHHhc--CCCEEEECCccc
Confidence            799999999999999988877899999998731              233322  2333334332  578888887653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=94.90  E-value=0.064  Score=58.89  Aligned_cols=40  Identities=18%  Similarity=0.047  Sum_probs=33.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc---CCeEEEEecChHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY---GLTVFASVGCPVGV  148 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~---Ga~Viat~~s~~k~  148 (655)
                      ..+.+|+|+||+|.||..+++-....   |.+|+++++++++.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~  113 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE  113 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH
Confidence            57899999999999999888766666   89999999976543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=94.90  E-value=0.067  Score=53.14  Aligned_cols=67  Identities=18%  Similarity=0.072  Sum_probs=46.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|+|+||+|+||..+++.+. .|.+|++++++++..     .|  ...|..+.  +++.+.+.+.  ++|+|+.++|..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~--~~~Dl~~~--~~~~~~~~~~--~~d~vi~~a~~~   68 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG--YKLDLTDF--PRLEDFIIKK--RPDVIINAAAMT   68 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC--EECCTTSH--HHHHHHHHHH--CCSEEEECCCCC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC--ceeccCCH--HHHHHHHHhc--CCCEEEECCccc
Confidence            59999999999999988776 489999999876421     22  34455443  2344444432  489999998854

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=94.84  E-value=0.047  Score=53.15  Aligned_cols=98  Identities=16%  Similarity=0.051  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcC----
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYG----  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~----  178 (655)
                      .++++||=.|+  |.|..++.+|+++  +++|++++.+++..+.+++    .|.+.-+.....   +..+.+....    
T Consensus        57 ~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~l~~~~~~~~  131 (221)
T 3u81_A           57 YSPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG---ASQDLIPQLKKKYD  131 (221)
T ss_dssp             HCCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES---CHHHHGGGTTTTSC
T ss_pred             cCCCEEEEECC--CCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC---CHHHHHHHHHHhcC
Confidence            36788998897  5667888888875  6799999999988877754    454311111111   2333333322    


Q ss_pred             -CCeeEEEeCCCcchHH----HHHHHHHHhccccceEEE
Q psy14589        179 -SELDADHPGFTDPVYR----ARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 -~gvDvV~D~vG~~~~~----~l~~~l~~l~~gGrlv~v  212 (655)
                       +.+|+|+-......+.    .+..+ +.|++||+++.-
T Consensus       132 ~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~  169 (221)
T 3u81_A          132 VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD  169 (221)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES
T ss_pred             CCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe
Confidence             3799987544333211    12223 789999988764

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=94.82  E-value=0.045  Score=54.91  Aligned_cols=78  Identities=5%  Similarity=-0.064  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589        110 EPDTLFIIGA----------------NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus       110 ~Gd~VLI~Ga----------------sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~  173 (655)
                      .|.+|||+||                ||++|.+.++.+..+||+|+.+.+... +......|. .+++..+.  ++..+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~-~~~~~~~~~-~~~~v~s~--~em~~~   77 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRA-LKPEPHPNL-SIREITNT--KDLLIE   77 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTS-CCCCCCTTE-EEEECCSH--HHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcc-ccccCCCCe-EEEEHhHH--HHHHHH
Confidence            5889999999                888999999999999999998887532 110001233 45666543  356666


Q ss_pred             HHhcCCCeeEEEeCCCcc
Q psy14589        174 ILSYGSELDADHPGFTDP  191 (655)
Q Consensus       174 i~~~~~gvDvV~D~vG~~  191 (655)
                      +.+..+++|+++.+++-.
T Consensus        78 v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           78 MQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHGGGCSEEEECSBCC
T ss_pred             HHHhcCCCCEEEEcCccc
Confidence            666555789999887643

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=94.81  E-value=0.039  Score=56.05  Aligned_cols=75  Identities=13%  Similarity=-0.017  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +.+|+|+||+|.||..+++.+...  |.+|+++++++.+.+...  +...+ .|..+.  +++.+.+.+.  ++|+|+.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~--~~~~~~~~~~--~~d~vih~   75 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDF--NQIEHLVEVH--KITDIYLM   75 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCH--HHHHHHHHHT--TCCEEEEC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCH--HHHHHHHhhc--CCCEEEEC
Confidence            457999999999999999877666  789999988765533222  33322 244332  2344444332  68999999


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      +|..
T Consensus        76 a~~~   79 (312)
T 2yy7_A           76 AALL   79 (312)
T ss_dssp             CCCC
T ss_pred             CccC
Confidence            8853

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=94.81  E-value=0.065  Score=55.32  Aligned_cols=74  Identities=11%  Similarity=-0.012  Sum_probs=46.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChH--HHHHHHhC---CCcEE-EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPV--GVAKAYGL---GADYV-VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~--k~~~a~~L---GAd~v-Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .+|||+||+|.||..+++.+...  |.+|+++++++.  ..+.+.++   +...+ .|..+.  +++.+.+    .++|+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~----~~~d~   78 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADA--ELVDKLA----AKADA   78 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCH--HHHHHHH----TTCSE
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCH--HHHHHHh----hcCCE
Confidence            57999999999999999877666  889999988542  11222222   22222 233332  1222222    25799


Q ss_pred             EEeCCCcc
Q psy14589        184 DHPGFTDP  191 (655)
Q Consensus       184 V~D~vG~~  191 (655)
                      |+.++|..
T Consensus        79 vih~A~~~   86 (348)
T 1oc2_A           79 IVHYAAES   86 (348)
T ss_dssp             EEECCSCC
T ss_pred             EEECCccc
Confidence            99998853

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.80  E-value=0.014  Score=57.14  Aligned_cols=93  Identities=13%  Similarity=0.011  Sum_probs=63.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC-CcEEEeCCccchhHHHHHHHhc-CCCeeEEEe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG-ADYVVDHTIRELDRFANQILSY-GSELDADHP  186 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG-Ad~vId~~~~~~~d~~~~i~~~-~~gvDvV~D  186 (655)
                      ++|++||-.|+  |.|..+..+++. |++|++++.+++.++.+++.. ...++...-.      +.+.-. .+.+|+|+.
T Consensus        47 ~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~------~~~~~~~~~~fD~v~~  117 (226)
T 3m33_A           47 TPQTRVLEAGC--GHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGK------GELPAGLGAPFGLIVS  117 (226)
T ss_dssp             CTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSC------SSCCTTCCCCEEEEEE
T ss_pred             CCCCeEEEeCC--CCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchh------hccCCcCCCCEEEEEe
Confidence            57889999998  456688888877 889999999999888887542 2233322110      001011 237999997


Q ss_pred             CCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        187 GFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       187 ~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..... .   +..+.+.|++||+++..+
T Consensus       118 ~~~~~~~---l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          118 RRGPTSV---ILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             ESCCSGG---GGGHHHHEEEEEEEEEEE
T ss_pred             CCCHHHH---HHHHHHHcCCCcEEEEeC
Confidence            64333 5   788899999999998543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=94.78  E-value=0.042  Score=56.68  Aligned_cols=72  Identities=15%  Similarity=0.032  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHH-HhCC-----CcE-EEeCCccchhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKA-YGLG-----ADY-VVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a-~~LG-----Ad~-vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .|.+|+|.|+ ||+|.+++..+...|+ +|+++.|+.+|.+.+ ++++     ... +++..     ++.+.+.    .+
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-----~l~~~l~----~~  195 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-----GIEDVIA----AA  195 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-----THHHHHH----HS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-----HHHHHHh----cC
Confidence            7899999999 9999999988888999 799999998887654 3332     121 22221     3444444    47


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+|++|++..
T Consensus       196 DiVInaTp~G  205 (283)
T 3jyo_A          196 DGVVNATPMG  205 (283)
T ss_dssp             SEEEECSSTT
T ss_pred             CEEEECCCCC
Confidence            9999988643

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=94.78  E-value=0.035  Score=59.01  Aligned_cols=90  Identities=14%  Similarity=0.068  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||...++.++.+|++|++.++++.+.+.+.+.|+..+    .    ++.+.+.    ..|+|+-++.
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~----~l~ell~----~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV----E----DLNEMLP----KCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC----S----CHHHHGG----GCSEEEECSC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc----C----CHHHHHh----cCCEEEECCC
Confidence            7899999999 999999999999999999999988766667777786432    1    2333332    4688888776


Q ss_pred             cc--hHHH-HHHHHHHhccccceEEE
Q psy14589        190 DP--VYRA-RRKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~--~~~~-l~~~l~~l~~gGrlv~v  212 (655)
                      ..  +... -...++.|++++.+|-+
T Consensus       230 lt~~t~~li~~~~l~~mk~gailIN~  255 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKGVLIVNN  255 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTEEEEEC
T ss_pred             CCHHHHHhhcHHHHhcCCCCCEEEEC
Confidence            42  1000 15667888887766654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.78  E-value=0.08  Score=59.20  Aligned_cols=80  Identities=20%  Similarity=0.086  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEE-ecCh-------------H----HHHHHHhCCCcEEE---eCCccc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFAS-VGCP-------------V----GVAKAYGLGADYVV---DHTIRE  166 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat-~~s~-------------~----k~~~a~~LGAd~vI---d~~~~~  166 (655)
                      ++|.++||+||+||||..+++.....|++ |+.+ +++.             +    ..+.+++.|+...+   |.++. 
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~-  327 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA-  327 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH-
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH-
Confidence            67899999999999999988877677996 6666 6662             1    12334455654332   33332 


Q ss_pred             hhHHHHHHHhc--CCCeeEEEeCCCc
Q psy14589        167 LDRFANQILSY--GSELDADHPGFTD  190 (655)
Q Consensus       167 ~~d~~~~i~~~--~~gvDvV~D~vG~  190 (655)
                       +++.+.+.+.  .+++|+||.+.|.
T Consensus       328 -~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          328 -EAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             -HHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             -HHHHHHHHHHHhcCCCcEEEECCcC
Confidence             2344444433  2378999998874

>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A

Probab=94.77  E-value=0.08  Score=43.70  Aligned_cols=65  Identities=11%  Similarity=0.139  Sum_probs=47.9

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccCC
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSCS  329 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~  329 (655)
                      .+.+.+...+ +||.|+++.+.|++.++|+..+...+...   .....+.++.  ...+.+++++|++...
T Consensus         5 ~~~l~v~~~D-r~G~L~~I~~~la~~~inI~~i~~~~~~~---~~~~~i~v~~~~~~~l~~l~~~L~~~~~   71 (88)
T 2ko1_A            5 LAGIRIVGED-KNGMTNQITGVISKFDTNIRTIVLNAKDG---IFTCNLMIFVKNTDKLTTLMDKLRKVQG   71 (88)
T ss_dssp             EEEEEEEEEC-CTTHHHHHHHHHTTSSSCEEEEEEEECSS---EEEEEEEEEESSHHHHHHHHHHHTTCTT
T ss_pred             EEEEEEEEEC-CCcHHHHHHHHHHHCCCCeEEEEEEEcCC---EEEEEEEEEECCHHHHHHHHHHHhcCCC
Confidence            3455666777 99999999999999999999998876543   3333334433  4678899999987654

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=94.76  E-value=0.23  Score=47.08  Aligned_cols=93  Identities=11%  Similarity=-0.035  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC-CcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC-
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG-ADYVVDHTIRELDRFANQILSYGSELDADHPGF-  188 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG-Ad~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v-  188 (655)
                      +.+||=.|+  |.|..+..+++. |++|++++.+++.++.+++.. --.++...-.   ++    ....+.+|+|+-.. 
T Consensus        42 ~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~---~~----~~~~~~fD~v~~~~~  111 (203)
T 3h2b_A           42 DGVILDVGS--GTGRWTGHLASL-GHQIEGLEPATRLVELARQTHPSVTFHHGTIT---DL----SDSPKRWAGLLAWYS  111 (203)
T ss_dssp             CSCEEEETC--TTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHCTTSEEECCCGG---GG----GGSCCCEEEEEEESS
T ss_pred             CCeEEEecC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCCCCeEEeCccc---cc----ccCCCCeEEEEehhh
Confidence            678998887  456677777776 889999999998888887642 2233322111   11    11124799998632 


Q ss_pred             ----C-cchHHHHHHHHHHhccccceEEEe
Q psy14589        189 ----T-DPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 ----G-~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                          . ......++.+.+.|++||++++..
T Consensus       112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~  141 (203)
T 3h2b_A          112 LIHMGPGELPDALVALRMAVEDGGGLLMSF  141 (203)
T ss_dssp             STTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             HhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence                1 122244788889999999998764

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=94.72  E-value=0.094  Score=50.59  Aligned_cols=178  Identities=12%  Similarity=0.023  Sum_probs=96.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCC-------cEEEeCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGA-------DYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGA-------d~vId~~~~~~~d~~~~i~~~  177 (655)
                      +++++||-.|+  |.|..+..+++. |++|++++.+++..+.+++    .|.       ..++.....   ++    ...
T Consensus        29 ~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~---~~----~~~   98 (235)
T 3sm3_A           29 QEDDEILDIGC--GSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENAS---SL----SFH   98 (235)
T ss_dssp             CTTCEEEEETC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTT---SC----CSC
T ss_pred             CCCCeEEEECC--CCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccc---cc----CCC
Confidence            57899999998  457788888877 8999999999988888765    332       122221110   00    001


Q ss_pred             CCCeeEEEeCCCcc----hH---HHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeecccccc
Q psy14589        178 GSELDADHPGFTDP----VY---RARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLI  250 (655)
Q Consensus       178 ~~gvDvV~D~vG~~----~~---~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~  250 (655)
                      .+.+|+|+-...-.    ..   ..++.+.+.|++||+++++....-..           .-.++..+.-.+-.......
T Consensus        99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  167 (235)
T 3sm3_A           99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWH-----------LKLYRKRYLHDFPITKEEGS  167 (235)
T ss_dssp             TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTT-----------SHHHHHHHHHHHHHHCSTTE
T ss_pred             CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchh-----------HHHHHHHhhhhccchhhhcc
Confidence            23699988532111    11   34788889999999999875211000           00001111111100000000


Q ss_pred             ccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecc--cCCCCCcceEEEEEecC
Q psy14589        251 QSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESR--SSTRIENNYEFMVECAP  313 (655)
Q Consensus       251 ~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSR--P~~~~~~~Y~FfVd~eg  313 (655)
                       ........+........     -+..++.+++++.|..+..++..  +.........+||...+
T Consensus       168 -~~~~~~~~~~~~~~~~~-----~~~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~~~~~~i~~~~  226 (235)
T 3sm3_A          168 -FLARDPETGETEFIAHH-----FTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGFVIIAQK  226 (235)
T ss_dssp             -EEEECTTTCCEEEEEEC-----BCHHHHHHHHHTTTEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred             -eEecccccCCcceeeEe-----CCHHHHHHHHHHcCCEEEEEEecceeeccCCccceEEEeeHH
Confidence             00000111111111111     23567888888999999888754  44555556778887754

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=94.72  E-value=0.12  Score=51.70  Aligned_cols=98  Identities=10%  Similarity=-0.025  Sum_probs=60.2

Q ss_pred             CCCC-CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhc
Q psy14589        106 LYTP-EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       106 ~l~~-~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~  177 (655)
                      .+ + ++++||=.|+  |.|..++.+|+....+|++++.+++..+.+++    .|..   .++...      +.+.....
T Consensus        45 ~~-~~~~~~vLDlG~--G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D------~~~~~~~~  115 (259)
T 3lpm_A           45 YL-PIRKGKIIDLCS--GNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYD------LKKITDLI  115 (259)
T ss_dssp             CC-CSSCCEEEETTC--TTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSC------GGGGGGTS
T ss_pred             cC-CCCCCEEEEcCC--chhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECc------HHHhhhhh
Confidence            44 5 7899998887  45667777777755599999999988777643    4432   333221      11111112


Q ss_pred             -CCCeeEEEeCCC--------c----------------chHHHHHHHHHHhccccceEEE
Q psy14589        178 -GSELDADHPGFT--------D----------------PVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 -~~gvDvV~D~vG--------~----------------~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                       .+.+|+|+-...        .                ...+.++.+.+.|++||+++++
T Consensus       116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~  175 (259)
T 3lpm_A          116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV  175 (259)
T ss_dssp             CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence             237999986311        0                0012356777788888887764

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=94.71  E-value=0.05  Score=54.69  Aligned_cols=96  Identities=13%  Similarity=0.031  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHH----hCCCcE--EEeCCccchhHHHHHHHh--cCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAY----GLGADY--VVDHTIRELDRFANQILS--YGS  179 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~----~LGAd~--vId~~~~~~~d~~~~i~~--~~~  179 (655)
                      +++++||=.|+  |.|..++.+|+.. +++|++++.+++..+.++    .+|.+.  ++..      +..+....  ..+
T Consensus        79 ~~~~~vLDiG~--G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~------d~~~~~~~~~~~~  150 (249)
T 3g89_A           79 QGPLRVLDLGT--GAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG------RAEVLAREAGHRE  150 (249)
T ss_dssp             CSSCEEEEETC--TTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC------CHHHHTTSTTTTT
T ss_pred             CCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC------cHHHhhcccccCC
Confidence            57889997786  4555667777775 579999999999887775    356543  2322      22222111  123


Q ss_pred             CeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        180 ELDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       180 gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+|+|+-..-.+....++.+.+.|++||+++.+
T Consensus       151 ~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~  183 (249)
T 3g89_A          151 AYARAVARAVAPLCVLSELLLPFLEVGGAAVAM  183 (249)
T ss_dssp             CEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CceEEEECCcCCHHHHHHHHHHHcCCCeEEEEE
Confidence            799998644333223467788899999998864

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.71  E-value=0.12  Score=56.57  Aligned_cols=88  Identities=9%  Similarity=0.047  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE--eCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV--DHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+.+|+|+|+ |++|..+++.+...|++|+++++++++.+.+. .++....+  |..+.  +++.+.+    .++|+|+.
T Consensus         2 ~~k~VlViGa-G~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~--~~l~~~l----~~~DvVIn   74 (450)
T 1ff9_A            2 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD--AALDAEV----AKHDLVIS   74 (450)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCH--HHHHHHH----TTSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCH--HHHHHHH----cCCcEEEE
Confidence            3678999985 99999998887788999999999887766543 34422222  43321  1333333    26899999


Q ss_pred             CCCcchHHHHHHHHHHhccc
Q psy14589        187 GFTDPVYRARRKYFADLAFN  206 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~l~~g  206 (655)
                      ++|....  ......+++.|
T Consensus        75 ~a~~~~~--~~i~~a~l~~g   92 (450)
T 1ff9_A           75 LIPYTFH--ATVIKSAIRQK   92 (450)
T ss_dssp             CCC--CH--HHHHHHHHHHT
T ss_pred             CCccccc--hHHHHHHHhCC
Confidence            9987530  22234455554

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=94.71  E-value=0.06  Score=56.67  Aligned_cols=88  Identities=14%  Similarity=0.064  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.+|...++.++..|.+|++.++++++ +.+.+.|+..    .     ++.+.+.    ..|+|+.++.
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~----~-----~l~~~l~----~aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF----K-----PLEDLLR----ESDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE----C-----CHHHHHH----HCSEEEECCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc----C-----CHHHHHh----hCCEEEECCC
Confidence            6889999998 999999999999999999999998877 5666677632    1     2333333    3699999987


Q ss_pred             cch--HHHH-HHHHHHhccccceEEE
Q psy14589        190 DPV--YRAR-RKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~~--~~~l-~~~l~~l~~gGrlv~v  212 (655)
                      ...  ...+ ...++.++++..+|-+
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~ailIn~  239 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKTAILINI  239 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTTCEEEEC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEEC
Confidence            641  0112 3567788887666544

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=94.69  E-value=0.035  Score=55.46  Aligned_cols=98  Identities=17%  Similarity=0.023  Sum_probs=65.1

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhc
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~  177 (655)
                      ..+ ++|++||-.|+  |.|..+..+++..|++|++++.+++.++.+++    .|..   .++...-.   ++    .-.
T Consensus        57 ~~~-~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~---~~----~~~  126 (273)
T 3bus_A           57 LDV-RSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM---DL----PFE  126 (273)
T ss_dssp             SCC-CTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT---SC----CSC
T ss_pred             cCC-CCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc---cC----CCC
Confidence            345 68999999997  45888889999889999999999987776653    3432   22221110   10    001


Q ss_pred             CCCeeEEEeC-----CCcchHHHHHHHHHHhccccceEEEe
Q psy14589        178 GSELDADHPG-----FTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~gvDvV~D~-----vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.+|+|+-.     +... ...++.+.++|++||++++..
T Consensus       127 ~~~fD~v~~~~~l~~~~~~-~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          127 DASFDAVWALESLHHMPDR-GRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             TTCEEEEEEESCTTTSSCH-HHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCccEEEEechhhhCCCH-HHHHHHHHHHcCCCeEEEEEE
Confidence            2369998742     2222 234788888999999998864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=94.68  E-value=0.036  Score=55.84  Aligned_cols=65  Identities=14%  Similarity=-0.035  Sum_probs=45.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .+..+|||+||+|.||..+++.+...|.+|++++++.              .|..+.  +++.+.+.+.  ++|+|+.++
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------------~Dl~d~--~~~~~~~~~~--~~d~vih~A   71 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------LDITNV--LAVNKFFNEK--KPNVVINCA   71 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------CCTTCH--HHHHHHHHHH--CCSEEEECC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc--------------CCCCCH--HHHHHHHHhc--CCCEEEECC
Confidence            4678999999999999999988888899999998751              233332  2333334322  578888888


Q ss_pred             Ccc
Q psy14589        189 TDP  191 (655)
Q Consensus       189 G~~  191 (655)
                      |..
T Consensus        72 ~~~   74 (292)
T 1vl0_A           72 AHT   74 (292)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            743

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=94.64  E-value=0.096  Score=57.62  Aligned_cols=98  Identities=8%  Similarity=-0.018  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      ++|++||=.||  |.|..++++|+.++  .+|++++.++++++.++    .+|.+.+.-...    |..+......+.+|
T Consensus       104 ~~g~~VLDlca--GpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~----Da~~l~~~~~~~FD  177 (456)
T 3m4x_A          104 KPGEKVLDLCA--APGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH----APAELVPHFSGFFD  177 (456)
T ss_dssp             CTTCEEEESSC--TTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC----CHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECC--CcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC----CHHHhhhhccccCC
Confidence            68999986565  34445566776653  58999999998887764    467654322111    22222212234799


Q ss_pred             EEEe---CCCcchH-----------------------HHHHHHHHHhccccceEEE
Q psy14589        183 ADHP---GFTDPVY-----------------------RARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       183 vV~D---~vG~~~~-----------------------~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+-   |+|...+                       +.++.++++|++||++|..
T Consensus       178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs  233 (456)
T 3m4x_A          178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS  233 (456)
T ss_dssp             EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            9874   4433210                       4477888999999998865

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=94.62  E-value=0.065  Score=56.99  Aligned_cols=90  Identities=13%  Similarity=-0.020  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||..+++.++.+|++|++.+++. +.+.+.+.|+..+    .    ++.+.+.    ..|+|+-++.
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~----~----~l~ell~----~aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVA----E----SKDALFE----QSDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEEC----S----SHHHHHH----HCSEEEECCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEe----C----CHHHHHh----hCCEEEEecc
Confidence            6889999999 9999999999999999999998865 4456778887532    1    2333333    3699988875


Q ss_pred             cc--hHHH-HHHHHHHhccccceEEEe
Q psy14589        190 DP--VYRA-RRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~--~~~~-l~~~l~~l~~gGrlv~v~  213 (655)
                      ..  +... -...++.|++|+.+|-++
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence            33  1000 146778899888777653

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=94.62  E-value=0.042  Score=57.96  Aligned_cols=75  Identities=12%  Similarity=-0.052  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHH-HHH-hCCCcEEE--eCCccchhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVA-KAY-GLGADYVV--DHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~-~a~-~LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      .+.+|+|+||+|.||..+++.+...| .+|+++++++.+.. .+. .-++ .++  |..+      .+.+.+.-.++|+|
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v-~~~~~Dl~d------~~~l~~~~~~~d~V  103 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAV-RFSETSITD------DALLASLQDEYDYV  103 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTE-EEECSCTTC------HHHHHHCCSCCSEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCce-EEEECCCCC------HHHHHHHhhCCCEE
Confidence            56789999999999999998888889 99999988764321 111 1122 222  2222      12344443479999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus       104 ih~A~~~  110 (377)
T 2q1s_A          104 FHLATYH  110 (377)
T ss_dssp             EECCCCS
T ss_pred             EECCCcc
Confidence            9998854

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=94.60  E-value=0.22  Score=48.61  Aligned_cols=103  Identities=13%  Similarity=-0.026  Sum_probs=63.7

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChH----HHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPV----GVAKAYGLGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~----k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ...+ ++|++||-.|+  |.|..+..+++..|  .+|++++.+++    ..+.++...--.++...-.   +. ..+...
T Consensus        72 ~~~~-~~~~~vLDlG~--G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~---~~-~~~~~~  144 (233)
T 2ipx_A           72 QIHI-KPGAKVLYLGA--ASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDAR---HP-HKYRML  144 (233)
T ss_dssp             CCCC-CTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTT---CG-GGGGGG
T ss_pred             eecC-CCCCEEEEEcc--cCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccC---Ch-hhhccc
Confidence            3456 78999999898  44888889998874  69999999965    3344444322222221111   10 001112


Q ss_pred             CCCeeEEEeCCCcchH--HHHHHHHHHhccccceEEEe
Q psy14589        178 GSELDADHPGFTDPVY--RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~gvDvV~D~vG~~~~--~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.+|+|+-.......  ..+..+.+.|++||++++..
T Consensus       145 ~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~  182 (233)
T 2ipx_A          145 IAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISI  182 (233)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEE
Confidence            3479999876554311  12556888999999998853

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=94.59  E-value=0.12  Score=51.52  Aligned_cols=99  Identities=12%  Similarity=-0.119  Sum_probs=65.3

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhc
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~  177 (655)
                      ..+ ++|++||-.|+  |.|..+..+++.-+++|++++.++..++.+++    .|..   .++...-.   ++    .-.
T Consensus        42 ~~~-~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~----~~~  111 (267)
T 3kkz_A           42 DNL-TEKSLIADIGC--GTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD---DL----PFR  111 (267)
T ss_dssp             CCC-CTTCEEEEETC--TTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT---SC----CCC
T ss_pred             ccC-CCCCEEEEeCC--CCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh---hC----CCC
Confidence            345 78999999998  46888899998856699999999987776643    4432   22221110   11    001


Q ss_pred             CCCeeEEEeCCCcc---hHHHHHHHHHHhccccceEEEe
Q psy14589        178 GSELDADHPGFTDP---VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~gvDvV~D~vG~~---~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.+|+|+-...-.   ..+.++.+.++|++||++++..
T Consensus       112 ~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          112 NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            23699998532211   1234778888999999998875

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=94.59  E-value=0.22  Score=49.72  Aligned_cols=103  Identities=13%  Similarity=-0.008  Sum_probs=59.9

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHH----HHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVA----KAYGLGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~----~a~~LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      ....+ ++|++||=.|+  |.|..+..+|+..|  .+|++++.++...+    .+++..--..+.....   .. .....
T Consensus        70 ~~~~l-~~g~~VLDlG~--GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~---~~-~~~~~  142 (232)
T 3id6_C           70 KTNPI-RKGTKVLYLGA--ASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADAR---FP-QSYKS  142 (232)
T ss_dssp             SCCSC-CTTCEEEEETC--TTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTT---CG-GGTTT
T ss_pred             hhcCC-CCCCEEEEEee--cCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccc---cc-hhhhc
Confidence            33456 89999998898  34457777887765  49999999997643    2333322222221110   00 00011


Q ss_pred             cCCCeeEEEeCCCcch-HHHHHHHHH-HhccccceEEE
Q psy14589        177 YGSELDADHPGFTDPV-YRARRKYFA-DLAFNYKHFFF  212 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~~-~~~l~~~l~-~l~~gGrlv~v  212 (655)
                      ....+|+|+-.+..+. -+.+...++ .|++||++++.
T Consensus       143 ~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          143 VVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            1237999876554442 122334444 89999999886

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=94.59  E-value=0.049  Score=57.08  Aligned_cols=90  Identities=9%  Similarity=-0.074  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|.+|.|.|. |.||...++.++..|++|++.++ ++++ +.+.+.|+.. .   .    ++.+.+.    ..|+|+-++
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~-~---~----~l~ell~----~aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATF-H---D----SLDSLLS----VSQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEE-C---S----SHHHHHH----HCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEE-c---C----CHHHHHh----hCCEEEEec
Confidence            7889999999 99999999999999999999998 7765 3566678742 1   1    2223333    369999888


Q ss_pred             Ccc--hHHHH-HHHHHHhccccceEEEe
Q psy14589        189 TDP--VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~--~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                      ...  +...+ ...++.+++++.+|-++
T Consensus       211 p~~~~t~~~i~~~~l~~mk~gailIn~a  238 (320)
T 1gdh_A          211 PSTPETRYFFNKATIKSLPQGAIVVNTA  238 (320)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred             cCchHHHhhcCHHHHhhCCCCcEEEECC
Confidence            743  10012 35667888877766654

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=94.58  E-value=0.025  Score=59.69  Aligned_cols=90  Identities=12%  Similarity=-0.006  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||...++.++.+|++|++.++++.+.+.+.+.|+..    .     ++.+.+.    ..|+|+-++.
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~-----~l~ell~----~aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ----V-----ACSELFA----SSDFILLALP  209 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE----C-----CHHHHHH----HCSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee----C-----CHHHHHh----hCCEEEEcCC
Confidence            6899999999 99999999999999999999998875556666777532    1     1233333    3689988876


Q ss_pred             cc--hHHHH-HHHHHHhccccceEEEe
Q psy14589        190 DP--VYRAR-RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~--~~~~l-~~~l~~l~~gGrlv~v~  213 (655)
                      ..  +...+ ...++.|++|+.+|-++
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~a  236 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPC  236 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence            32  10002 46778888888777654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=94.58  E-value=0.03  Score=58.94  Aligned_cols=75  Identities=12%  Similarity=-0.002  Sum_probs=48.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH--HHHHhC----------CCcEE-EeCCccchhHHHHHHHhcC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV--AKAYGL----------GADYV-VDHTIRELDRFANQILSYG  178 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~--~~a~~L----------GAd~v-Id~~~~~~~d~~~~i~~~~  178 (655)
                      .+|||+||+|.||..+++.+...|.+|+++++++++.  +.+..+          ++..+ .|..+.  +++.+.+... 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDA--SSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCH--HHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCH--HHHHHHHHhc-
Confidence            5799999999999999988888899999999876431  011111          22222 233332  2343444332 


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                       ++|+|+.++|.
T Consensus       106 -~~d~Vih~A~~  116 (381)
T 1n7h_A          106 -KPDEVYNLAAQ  116 (381)
T ss_dssp             -CCSEEEECCSC
T ss_pred             -CCCEEEECCcc
Confidence             47999999885

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=94.53  E-value=0.052  Score=57.55  Aligned_cols=90  Identities=12%  Similarity=0.046  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHH-HcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGK-AYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk-~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|.+|.|.|. |.||...++.++ ..|.+|++.++++++.+.+.++|+..+    .    ++.+.+.    ..|+|+.++
T Consensus       162 ~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~----~l~ell~----~aDvVil~v  228 (348)
T 2w2k_A          162 RGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV----D----SLEELAR----RSDCVSVSV  228 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC----S----SHHHHHH----HCSEEEECC
T ss_pred             CCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe----C----CHHHHhc----cCCEEEEeC
Confidence            7899999999 999999999999 999999999988776666666776432    1    2223333    369999888


Q ss_pred             Ccc--hHHHH-HHHHHHhccccceEEE
Q psy14589        189 TDP--VYRAR-RKYFADLAFNYKHFFF  212 (655)
Q Consensus       189 G~~--~~~~l-~~~l~~l~~gGrlv~v  212 (655)
                      ...  +...+ ...++.++++..+|-+
T Consensus       229 p~~~~t~~li~~~~l~~mk~gailin~  255 (348)
T 2w2k_A          229 PYMKLTHHLIDEAFFAAMKPGSRIVNT  255 (348)
T ss_dssp             CCSGGGTTCBCHHHHHHSCTTEEEEEC
T ss_pred             CCChHHHHHhhHHHHhcCCCCCEEEEC
Confidence            653  10012 3567788887666554

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=94.52  E-value=0.11  Score=49.83  Aligned_cols=93  Identities=18%  Similarity=0.135  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC-CCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL-GADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L-GAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +++.+||=.|+  |.|..+..+++. |++|++++.+++-++.+++. +...+. ..-.   ++.     ..+.+|+|+-.
T Consensus        42 ~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~d~~---~~~-----~~~~fD~v~~~  109 (211)
T 3e23_A           42 PAGAKILELGC--GAGYQAEAMLAA-GFDVDATDGSPELAAEASRRLGRPVRT-MLFH---QLD-----AIDAYDAVWAH  109 (211)
T ss_dssp             CTTCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEE-CCGG---GCC-----CCSCEEEEEEC
T ss_pred             CCCCcEEEECC--CCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcCCceEE-eeec---cCC-----CCCcEEEEEec
Confidence            67889998887  567788888876 88999999999888887653 443322 1111   111     23479999864


Q ss_pred             CCcc------hHHHHHHHHHHhccccceEEEe
Q psy14589        188 FTDP------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       188 vG~~------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..-.      ....+..+.+.|++||++++..
T Consensus       110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  141 (211)
T 3e23_A          110 ACLLHVPRDELADVLKLIWRALKPGGLFYASY  141 (211)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            3221      1134678888999999988763

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.52  E-value=0.24  Score=48.13  Aligned_cols=73  Identities=12%  Similarity=-0.090  Sum_probs=53.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEE-eCCccchhHHHHHHHhc-CCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVV-DHTIRELDRFANQILSY-GSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vI-d~~~~~~~d~~~~i~~~-~~gvDvV~D~vG  189 (655)
                      +|+|.|+ |.+|..+++..+..|.+|+++++++++.+.+. ..|...+. |..+      .+.+.+. -.++|+|+-+++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~------~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSH------KEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTS------HHHHHHHTCCTTCEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCC------HHHHHhcCcccCCEEEEecC
Confidence            5899998 99999999988889999999999999887754 56765433 2222      1223333 237899999998


Q ss_pred             cch
Q psy14589        190 DPV  192 (655)
Q Consensus       190 ~~~  192 (655)
                      .+.
T Consensus        75 ~d~   77 (218)
T 3l4b_C           75 RDE   77 (218)
T ss_dssp             CHH
T ss_pred             CcH
Confidence            874

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=94.51  E-value=0.079  Score=54.05  Aligned_cols=95  Identities=13%  Similarity=-0.035  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHh-C-----CC--c--EEEeCCccchhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYG-L-----GA--D--YVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~-L-----GA--d--~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ++.+||+.|+  |.|..+..+++..+ .+|++++.+++-.+.+++ +     +.  .  .++..      |..+.+.+..
T Consensus        75 ~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~------D~~~~l~~~~  146 (275)
T 1iy9_A           75 NPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAKSE  146 (275)
T ss_dssp             SCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHTCC
T ss_pred             CCCEEEEECC--chHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC------cHHHHHhhCC
Confidence            5789999997  45667778887766 599999999988877764 2     21  1  22221      2333444434


Q ss_pred             CCeeEEEeCCCcc--------hHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDP--------VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~--------~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+|+|+-....+        +.+.++.+.+.|++||.+++-
T Consensus       147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~  188 (275)
T 1iy9_A          147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (275)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            5799987543221        123478999999999998875

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=94.49  E-value=0.057  Score=52.64  Aligned_cols=95  Identities=16%  Similarity=0.048  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCc---EEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGAD---YVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd---~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      .++.+||-.|+  |.|..+..+++. |. +|++++.+++.++.+++....   .++...      ..+ ..-..+.+|+|
T Consensus        42 ~~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d------~~~-~~~~~~~fD~v  111 (243)
T 3bkw_A           42 VGGLRIVDLGC--GFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERAD------LDK-LHLPQDSFDLA  111 (243)
T ss_dssp             CTTCEEEEETC--TTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECC------GGG-CCCCTTCEEEE
T ss_pred             cCCCEEEEEcC--cCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcC------hhh-ccCCCCCceEE
Confidence            47889998887  447777777776 77 999999999988888875432   222211      111 00012369999


Q ss_pred             EeCCCcc----hHHHHHHHHHHhccccceEEEe
Q psy14589        185 HPGFTDP----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       185 ~D~vG~~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +....-.    ....++.+.++|++||++++..
T Consensus       112 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          112 YSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            8643211    1234788889999999998864

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=94.48  E-value=0.052  Score=55.50  Aligned_cols=94  Identities=16%  Similarity=0.077  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-C----CC---------c--EEEeCCccchhHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-L----GA---------D--YVVDHTIRELDRFA  171 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-L----GA---------d--~vId~~~~~~~d~~  171 (655)
                      +++.+||+.|+  |.|..+..+++. +. +|++++.+++-.+.+++ +    |.         .  .++.   .   |..
T Consensus        74 ~~~~~VLdiG~--G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~---~---D~~  144 (281)
T 1mjf_A           74 PKPKRVLVIGG--GDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---G---DGF  144 (281)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---S---CHH
T ss_pred             CCCCeEEEEcC--CcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE---C---chH
Confidence            36789999997  456677788887 65 99999999988888764 3    21         1  2221   1   333


Q ss_pred             HHHHhcCCCeeEEEeCCCc------c--hHHHHHHHHHHhccccceEEE
Q psy14589        172 NQILSYGSELDADHPGFTD------P--VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       172 ~~i~~~~~gvDvV~D~vG~------~--~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+.. .+.+|+|+-....      .  ..+.++.+.+.|++||.+++-
T Consensus       145 ~~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          145 EFIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             HHHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            33444 4479998743321      0  123378888999999998875

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=94.47  E-value=0.073  Score=54.54  Aligned_cols=66  Identities=21%  Similarity=0.120  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      |.+|+|.|+ ||+|.+++..++..|++|++..|+++|.+.+.++|+. ++.+.+     +       . .+|+|++|++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~~-----l-------~-~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEPP-----K-------S-AFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSCC-----S-------S-CCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHHH-----h-------c-cCCEEEEcccC
Confidence            889999998 9999999988888899999999998887665577743 333321     1       1 47888888764


Q ss_pred             c
Q psy14589        191 P  191 (655)
Q Consensus       191 ~  191 (655)
                      .
T Consensus       183 G  183 (269)
T 3phh_A          183 S  183 (269)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.47  E-value=0.051  Score=50.66  Aligned_cols=94  Identities=13%  Similarity=0.056  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc----EEEeCCccchhHHHHHHHhcCCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD----YVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd----~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      +++++||-.|+  |.|..+..+++. +.+|++++.+++..+.+++    .|..    .++...-      .+...  .+.
T Consensus        51 ~~~~~vLdiG~--G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~------~~~~~--~~~  119 (194)
T 1dus_A           51 DKDDDILDLGC--GYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL------YENVK--DRK  119 (194)
T ss_dssp             CTTCEEEEETC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST------TTTCT--TSC
T ss_pred             CCCCeEEEeCC--CCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch------hcccc--cCC
Confidence            58889998887  457788888887 8899999999987777653    3433    2332211      11111  236


Q ss_pred             eeEEEeCCC----cc-hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFT----DP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG----~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+|+-...    .. ....++.+.+.|++||++++..
T Consensus       120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  157 (194)
T 1dus_A          120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI  157 (194)
T ss_dssp             EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEE
Confidence            999986443    11 1234677888999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	655
d1j8ua_	307	d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Hum	1e-80
d1j8ua_	307	d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Hum	8e-46
d1j8ua_	307	d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Hum	4e-31
d1j8ua_	307	d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Hum	5e-21
d1toha_	336	d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus n	4e-78
d1toha_	336	d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus n	3e-44
d1toha_	336	d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus n	2e-29
d1toha_	336	d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus n	3e-21
d1mlwa_	290	d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo	1e-76
d1mlwa_	290	d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo	5e-43
d1mlwa_	290	d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo	5e-28
d1mlwa_	290	d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo	3e-21
d1ltza_	277	d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chr	4e-38
d1ltza_	277	d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chr	9e-38
d1ltza_	277	d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chr	1e-28
d1phza1	97	d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-t	2e-14
d2qmwa2	80	d.58.18.3 (A:185-264) Prephenate dehydratase C-ter	4e-11
d1y7pa2	77	d.58.18.12 (A:2-78) Hypothetical protein AF1403, N	5e-06
d1mtyb_	384	a.25.1.2 (B:) Methane monooxygenase hydrolase beta	0.004

>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  255 bits (654), Expect = 1e-80
 Identities = 143/206 (69%), Positives = 160/206 (77%), Gaps = 28/206 (13%)

Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
           VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H       
Sbjct: 1   VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 60

Query: 397 ----------------SILLMP-----EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                              L       E+NH+FPLL + CG+ EDNIPQLED+S+FL+  
Sbjct: 61  EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 120

Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D 
Sbjct: 121 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 180

Query: 496 SFAQFSQEIGLASLGAPDEYVERLAT 521
           SFAQFSQEIGLASLGAPDEY+E+LAT
Sbjct: 181 SFAQFSQEIGLASLGAPDEYIEKLAT 206

>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (412), Expect = 8e-46
 Identities = 82/112 (73%), Positives = 94/112 (83%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+PRV+Y  EE KTWG VF+ L  LY THAC E+NH+FPLL + CG+ EDNIPQLED+
Sbjct: 54  GQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDV 113

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
           S+FL+  TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 114 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 165

>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 4e-31
 Identities = 83/174 (47%), Positives = 94/174 (54%), Gaps = 25/174 (14%)

Query: 450 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEI 504
           R   A +A+  +   Q I       Y  E       V   L       A   +      +
Sbjct: 41  RKQFADIAYN-YRHGQPIPRVE---YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLL 96

Query: 505 GLASLGAPDEYVERLATSNNFMIVPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAF 561
                   D              +P+L  +S      TGF LRPVAGLLSSRDFL GLAF
Sbjct: 97  EKYCGFHEDN-------------IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAF 143

Query: 562 RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
           RVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 144 RVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAP 197

>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (229), Expect = 5e-21
 Identities = 39/46 (84%), Positives = 44/46 (95%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 8   IQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 53

>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 336

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  250 bits (639), Expect = 4e-78
 Identities = 114/206 (55%), Positives = 140/206 (67%), Gaps = 28/206 (13%)

Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
           VPWFPR++ ELD+  + +  +  +LD DHPGF+D VYR RRK  A++AF YKH       
Sbjct: 2   VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHV 61

Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                                +     EH   F LL + CGY ED+IPQLED+S+FLK+ 
Sbjct: 62  EYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKER 121

Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD CHELLGHVP+ AD 
Sbjct: 122 TGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 181

Query: 496 SFAQFSQEIGLASLGAPDEYVERLAT 521
           +FAQFSQ+IGLASLGA DE +E+L+T
Sbjct: 182 TFAQFSQDIGLASLGASDEEIEKLST 207

>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 336

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  159 bits (403), Expect = 3e-44
 Identities = 76/112 (67%), Positives = 89/112 (79%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           GEP+P V+YTAEE  TW EV+  L  LY THAC+EH   F LL + CGY ED+IPQLED+
Sbjct: 55  GEPIPHVEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDV 114

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
           S+FLK+ TGF LRPVAGLLS+RDFLA LAFRVF  TQYIRH S P+++PEPD
Sbjct: 115 SRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPD 166

>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 336

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  117 bits (294), Expect = 2e-29
 Identities = 75/172 (43%), Positives = 98/172 (56%), Gaps = 23/172 (13%)

Query: 450 RDFLAGLAFRVFHSTQ--YIRHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQ 502
           R  +A +AF+  H     ++       YT E      +V   L G     A     +   
Sbjct: 42  RKLIAEIAFQYKHGEPIPHVE------YTAEEIATWKEVYVTLKGLYATHACREHLE-GF 94

Query: 503 EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFR 562
           ++     G  ++ + +L   + F+          + TGF LRPVAGLLS+RDFLA LAFR
Sbjct: 95  QLLERYCGYREDSIPQLEDVSRFL---------KERTGFQLRPVAGLLSARDFLASLAFR 145

Query: 563 VFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
           VF  TQYIRH S P+++PEPD CHELLGHVP+ AD +FAQFSQ+IGLASLGA
Sbjct: 146 VFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGA 197

>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 336

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.9 bits (231), Expect = 3e-21
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           + ELD+  + +  +  +LD DHPGF+D VYR RRK  A++AF YKH
Sbjct: 9   VSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKH 54

>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]} Length = 290

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tryptophan hydroxylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  244 bits (624), Expect = 1e-76
 Identities = 129/206 (62%), Positives = 145/206 (70%), Gaps = 28/206 (13%)

Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
           VPWFP++I +LD  AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH       
Sbjct: 2   VPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKV 61

Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
                                      E+    PLL + CGY EDNIPQLED+S FLK+ 
Sbjct: 62  EFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKER 121

Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
           TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL A+P
Sbjct: 122 TGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEP 181

Query: 496 SFAQFSQEIGLASLGAPDEYVERLAT 521
           SFAQFSQEIGLASLGA +E V++LAT
Sbjct: 182 SFAQFSQEIGLASLGASEEAVQKLAT 207

>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]} Length = 290

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tryptophan hydroxylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (391), Expect = 5e-43
 Identities = 79/112 (70%), Positives = 92/112 (82%)

Query: 1   GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
           G+P+P+V++T EE KTWG VFR L KLYPTHAC+E+    PLL + CGY EDNIPQLED+
Sbjct: 55  GDPIPKVEFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDV 114

Query: 61  SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
           S FLK+ TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPD
Sbjct: 115 SNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPD 166

>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]} Length = 290

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tryptophan hydroxylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 5e-28
 Identities = 80/172 (46%), Positives = 98/172 (56%), Gaps = 23/172 (13%)

Query: 450 RDFLAGLAFRVFHSTQ--YIRHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQ 502
           R + A LA    H      +       +T E       V  EL    P  A   + + + 
Sbjct: 42  RKYFADLAMNYKHGDPIPKVE------FTEEEIKTWGTVFRELNKLYPTHACREYLK-NL 94

Query: 503 EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFR 562
            +     G  ++ + +L   +NF+          + TGFS+RPVAG LS RDFL+GLAFR
Sbjct: 95  PLLSKYCGYREDNIPQLEDVSNFLK---------ERTGFSIRPVAGYLSPRDFLSGLAFR 145

Query: 563 VFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
           VFH TQY+RH S P YTPEPD CHELLGHVPL A+PSFAQFSQEIGLASLGA
Sbjct: 146 VFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGA 197

>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]} Length = 290

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tryptophan hydroxylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.2 bits (229), Expect = 3e-21
 Identities = 35/46 (76%), Positives = 38/46 (82%)

Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
           I +LD  AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH
Sbjct: 9   ISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKH 54

>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chromobacterium violaceum [TaxId: 536]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Chromobacterium violaceum [TaxId: 536]

 Score =  140 bits (354), Expect = 4e-38
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 4/110 (3%)

Query: 3   PLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISK 62
           P P   Y+AE+  TW  +++   KL P  AC E       L        D +P    +++
Sbjct: 24  PQPLDRYSAEDHATWATLYQRQCKLLPGRACDEFLEGLERL----EVDADRVPDFNKLNE 79

Query: 63  FLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
            L  +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EPD
Sbjct: 80  KLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPD 129

>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chromobacterium violaceum [TaxId: 536]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Chromobacterium violaceum [TaxId: 536]

 Score =  139 bits (352), Expect = 9e-38
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 2/130 (1%)

Query: 394 YKHSILLMPEHNH-VFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDF 452
           Y+    L+P      F   ++      D +P    +++ L  +TG+ +  V GL+    F
Sbjct: 42  YQRQCKLLPGRACDEFLEGLERLEVDADRVPDFNKLNEKLMAATGWKIVAVPGLIPDDVF 101

Query: 453 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA- 511
              LA R F  T ++R P +  Y  EPDV H+L GHVPL  +P FA + +  G   + A 
Sbjct: 102 FEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLINPVFADYLEAYGKGGVKAK 161

Query: 512 PDEYVERLAT 521
               +  LA 
Sbjct: 162 ALGALPMLAR 171

>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chromobacterium violaceum [TaxId: 536]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Chromobacterium violaceum [TaxId: 536]

 Score =  113 bits (284), Expect = 1e-28
 Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 475 YTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVP 529
           Y+ E       +       +P  A   F +     GL  L    + V      N  ++  
Sbjct: 30  YSAEDHATWATLYQRQCKLLPGRACDEFLE-----GLERLEVDADRVPDFNKLNEKLM-- 82

Query: 530 RLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELL 589
                   +TG+ +  V GL+    F   LA R F  T ++R P +  Y  EPDV H+L 
Sbjct: 83  -------AATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLF 135

Query: 590 GHVPLFADPSFAQFSQEIGLASLGA 614
           GHVPL  +P FA + +  G   + A
Sbjct: 136 GHVPLLINPVFADYLEAYGKGGVKA 160

>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 97

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Phenylalanine metabolism regulatory domain
domain: Phenylalanine hydroxylase N-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.2 bits (164), Expect = 2e-14
 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 4/78 (5%)

Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMV--ECAPGGDLSSVI 321
           +IFS  ++EVGALAK L+LF+++++NL HIESR S   ++ YEF    +      L S+I
Sbjct: 19  LIFS-LKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSII 77

Query: 322 ESLRSSCSY-INIISRNH 338
           +SLR+     ++ +SR+ 
Sbjct: 78  KSLRNDIGATVHELSRDK 95

>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 80

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Phenylalanine metabolism regulatory domain
domain: Prephenate dehydratase C-terminal domain
species: Staphylococcus aureus [TaxId: 1280]

 Score = 57.4 bits (139), Expect = 4e-11
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC--APGGDLSSV 320
           F+I   H D+ G LA  L  F   N+NL  IESR        Y F V+   A   D+  V
Sbjct: 4   FLITPMH-DKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKV 62

Query: 321 IESLRSSCSYINII 334
           I  L +    + +I
Sbjct: 63  IAILETLDFKVEMI 76

>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 77

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: AF1403 N-terminal domain-like
domain: Hypothetical protein AF1403, N-terminal domain
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 42.4 bits (100), Expect = 5e-06
 Identities = 8/57 (14%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 271 DEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRS 326
           +++G L     +  +   N+   ++      E+  + ++     GGD   ++E +++
Sbjct: 10  NKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKT 66

>d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]} Length = 384

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Methane monooxygenase hydrolase beta subunit
species: Methylococcus capsulatus [TaxId: 414]

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 20/154 (12%), Positives = 34/154 (22%), Gaps = 13/154 (8%)

Query: 134 YGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELD--RFANQILSYGSELDADHPGFTD 190
           YGL    +             L     V       D    A  I      L    PGF +
Sbjct: 152 YGLFNAHSQGA-------REALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDE 204

Query: 191 PVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLI 250
                + ++     +             +   F +    F     +   F   +  +   
Sbjct: 205 STAVPKAEWTNGEVY---KSARLAVEGLWQEVFDWNESAFSVHAVYDALFGQFVRREFFQ 261

Query: 251 QSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFK 284
           +       +L  F I         A      L+ 
Sbjct: 262 RLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYY 295

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	655
d1toha_	336	Tyrosine hydroxylase {Rat (Rattus norvegicus) [Tax	100.0
d1j8ua_	307	Phenylalanine hydroxylase, PAH {Human (Homo sapien	100.0
d1mlwa_	290	Tryptophan hydroxylase {Human (Homo sapiens) [TaxI	100.0
d1ltza_	277	Phenylalanine hydroxylase, PAH {Chromobacterium vi	100.0
d1mlwa_	290	Tryptophan hydroxylase {Human (Homo sapiens) [TaxI	99.95
d1ltza_	277	Phenylalanine hydroxylase, PAH {Chromobacterium vi	99.95
d1toha_	336	Tyrosine hydroxylase {Rat (Rattus norvegicus) [Tax	99.95
d1j8ua_	307	Phenylalanine hydroxylase, PAH {Human (Homo sapien	99.94
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.91
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.89
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.87
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.87
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.87
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.86
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.86
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.85
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.85
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.85
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.84
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.84
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.84
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.83
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.83
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.83
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.83
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.83
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.82
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.81
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.8
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.79
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.78
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.78
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.77
d2qmwa2	80	Prephenate dehydratase C-terminal domain {Staphylo	99.7
d1phza1	97	Phenylalanine hydroxylase N-terminal domain {Rat (	99.64
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.55
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.79
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.74
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.69
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.67
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.66
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.65
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.61
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.6
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.56
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.54
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.53
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.52
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.51
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.5
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.5
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.48
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.47
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.47
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.46
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.46
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.44
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.43
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.41
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.41
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.41
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.39
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.39
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.38
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.38
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.37
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.36
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.36
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.34
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.33
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.33
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.3
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.29
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.28
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.27
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.25
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.23
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.2
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.18
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.15
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.12
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.11
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.08
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.04
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.04
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.03
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.02
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.98
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.93
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	96.91
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.88
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.81
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.8
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.79
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.77
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.71
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.68
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.62
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.61
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.59
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.59
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.58
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.57
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.5
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.48
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.43
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.4
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.4
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.37
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.37
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.36
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.34
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.29
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.29
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.26
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.24
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.22
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.21
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.04
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.03
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.03
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.0
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	95.98
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.96
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.96
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	95.87
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.84
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.82
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.79
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.66
d1y7pa2	77	Hypothetical protein AF1403, N-terminal domain {Ar	95.66
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.57
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	95.5
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.49
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.48
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	95.47
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.44
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.43
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.42
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.4
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.38
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.29
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.28
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.28
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.27
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.17
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.15
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.09
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.06
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.04
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.01
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.9
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.83
d2f1fa1	76	Acetolactate synthase small subunit, IlvH {Escheri	94.8
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.76
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.67
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.6
d2fgca2	78	Acetolactate synthase small subunit, IlvH {Thermot	94.46
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.31
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	94.3
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.27
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	94.22
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.19
d2pc6a2	77	Acetolactate synthase small subunit, IlvH {Nitroso	94.15
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.1
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	94.07
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.05
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	94.03
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	93.97
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.95
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.88
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.85
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.82
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.79
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	93.79
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.79
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	93.74
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.7
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.67
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.57
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	93.54
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.4
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	93.32
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	93.19
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.16
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.98
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	92.64
d1sc6a3	84	Phosphoglycerate dehydrogenase, regulatory (C-term	92.62
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	92.61
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.6
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	92.56
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.41
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.21
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	92.19
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.07
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.03
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.02
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.79
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	91.71
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.63
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	91.57
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.42
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.3
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.3
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	91.29
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.26
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.12
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.07
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.07
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	91.07
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	90.91
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	90.89
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	90.84
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.75
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	90.53
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	90.41
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.38
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	90.36
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	90.19
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	90.18
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	90.08
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	89.99
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.99
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	89.8
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	89.67
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	89.66
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.49
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	89.45
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	89.45
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	89.45
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	89.36
d1ygya3	78	Phosphoglycerate dehydrogenase, regulatory (C-term	89.28
d2f06a2	70	Hypothetical protein BT0572 {Bacteroides thetaiota	89.22
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	89.18
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	89.17
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	88.92
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	88.91
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	88.79
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	88.71
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	88.66
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	88.57
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	88.38
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	88.31
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.28
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	88.23
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	88.15
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	88.04
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.69
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.43
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	87.31
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	87.13
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.05
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	87.04
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.03
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	86.97
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	86.8
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	86.78
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	86.51
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	86.44
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	86.41
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	86.35
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	86.3
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	86.23
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	86.2
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	86.11
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	86.01
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	85.7
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	85.66
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	85.62
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	85.52
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	85.42
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	85.14
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	85.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	84.9
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	84.68
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.51
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	84.33
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	84.21
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.07
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	84.01
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	83.81
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	83.8
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	83.78
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.26
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	83.1
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	82.94
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	82.91
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	82.49
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	82.43
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	82.33
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	82.24
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	82.04
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	81.88
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	81.87
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	81.78
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	81.72
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	81.63
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	81.6
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	81.41
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	81.37
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	81.24
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	81.16
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	80.29
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	80.27

>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-87  Score=691.93  Aligned_cols=276  Identities=48%  Similarity=0.788  Sum_probs=241.0

Q ss_pred             CCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-----------------------
Q psy14589        343 GVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-----------------------  399 (655)
Q Consensus       343 ~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-----------------------  399 (655)
                      +||||||+|+|||+|+|++|+||+||++|||||+|++||+||++||++|++||+|++                       
T Consensus         1 ~vpwfp~~i~dld~~~~~~~~~~~~l~~dhpgf~D~~Yr~RR~~~a~~a~~~~~g~piP~v~YT~eE~~tW~~l~~rl~~   80 (336)
T d1toha_           1 KVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHVEYTAEEIATWKEVYVTLKG   80 (336)
T ss_dssp             CCCCCCSBGGGGGGC-----------CTTSTTTTCHHHHHHHHHHHHHHHHCCTTSCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHhchhhccCcccCCCCCCCCCHHHHHHHHHHHHHHHhccCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999999998                       


Q ss_pred             -----cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCC
Q psy14589        400 -----LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPL  474 (655)
Q Consensus       400 -----Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~  474 (655)
                           ||++|++|+++|++.||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++|+
T Consensus        81 l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~dvs~~L~~~TGw~l~pV~Gli~~r~F~~~LA~RvFp~TqyIR~~~~~~  160 (336)
T d1toha_          81 LYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPM  160 (336)
T ss_dssp             HHHHHBCHHHHHHHHHHHHHSCCBTTBCCCHHHHHHHHHHHTSCEEEECSSCCCHHHHHHHHTTTEEEECCCCCCTTCTT
T ss_pred             HHhccccHHHHHHHHHHHHhcCCCcCCCCCHHHHHHHHHHhhCCEEEecCCcCCHHHHHHHHhcCccceeeeeccccccc
Confidence                 999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCH
Q psy14589        475 YTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSR  553 (655)
Q Consensus       475 y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~  553 (655)
                      ||||||||||++||+|||+||+||+|+|++|++++++++++|.+|+|+||||||||||+++     +++|+ |||||||.
T Consensus       161 YtpEPDi~HEl~GHvPlLadp~fA~f~q~~G~~sl~a~de~i~~LarlYWfTVEFGLi~e~-----g~lKaYGAGLLSS~  235 (336)
T d1toha_         161 HSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQN-----GELKAYGAGLLSSY  235 (336)
T ss_dssp             CCSSCCHHHHHHHTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTTTCEEEET-----TEEEECCHHHHTCH
T ss_pred             cccchhHHHHHhCcccccCCHHHHHHHHHHHHHHhhcchHHHHHHhhhheeeEeeeeeccC-----CCceEecccccCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999     99999 99999999


Q ss_pred             HHHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeeccccc
Q psy14589        554 DFLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHELL  626 (655)
Q Consensus       554 ~~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~~~  626 (655)
                      +|++|+.+     +.|.+..-+++++.++-.+           =-++.-++|.+..+.+.  ...++.||.++|  +++|
T Consensus       236 gEl~~als~~~~~~pfd~~~v~~t~y~i~~~Q-----------p~YFV~~Sfe~l~e~l~~fa~~~~rpf~~~y--~p~t  302 (336)
T d1toha_         236 GELLHSLSEEPEVRAFDPDTAAVQPYQDQTYQ-----------PVYFVSESFNDAKDKLRNYASRIQRPFSVKF--DPYT  302 (336)
T ss_dssp             HHHHHHTSSSSEEEECCHHHHHTCCCCSSSCC-----------SEEEEESCHHHHHHHHHHHHHTSCCSCEEEE--ETTT
T ss_pred             HHHHHHccCCCcccCCCHHHHhcCCCCCCccc-----------cceEEECCHHHHHHHHHHHHHhcCCCccccc--CCcc
Confidence            99999865     3555544445544433333           12344555666665555  245689999999  9999


Q ss_pred             CccccccCch
Q psy14589        627 GHVPLFADPS  636 (655)
Q Consensus       627 ~~~~~~~~~~  636 (655)
                      ++|-|+|++.
T Consensus       303 ~~vevl~~~~  312 (336)
T d1toha_         303 LAIDVLDSPH  312 (336)
T ss_dssp             TEEEEECSHH
T ss_pred             ceEEeeCCHH
Confidence            9999999986

>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-87  Score=683.68  Aligned_cols=271  Identities=58%  Similarity=0.917  Sum_probs=247.3

Q ss_pred             CcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC------------------------
Q psy14589        344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL------------------------  399 (655)
Q Consensus       344 vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~------------------------  399 (655)
                      ||||||+|+|||+|+|++|+||+|||+|||||+|++||+||++||++|++||+|++                        
T Consensus         1 vpwfp~~~~dld~~~~~~~~~~~~l~~dhpgf~d~~yr~rR~~~a~~a~~~~~g~piP~v~YT~eE~~tW~~v~~~l~~l   80 (307)
T d1j8ua_           1 VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSL   80 (307)
T ss_dssp             CCCCCSBGGGGGGGGGSSCSSCGGGSTTSTTTTCHHHHHHHHHHHHHHHHCCTTSCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHhhhhcccccccCCCCCCCCChHHHHHHHHHHHHHHhccCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999998                        


Q ss_pred             ----cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCC
Q psy14589        400 ----LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLY  475 (655)
Q Consensus       400 ----Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y  475 (655)
                          ||++|++|+++|++.||+++|+||||+|||++|++.|||+++||+||||+|+||++||+|+|||||||||+++|+|
T Consensus        81 ~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~dvs~~L~~~TGw~~~pV~Gli~~~~F~~~LA~RvFp~TqyIR~~~~~~Y  160 (307)
T d1j8ua_          81 YKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMY  160 (307)
T ss_dssp             HHHHBCHHHHHHHHHHHHHHCCBTTBCCCHHHHHHHHHHHHSCEEEECCSCCCHHHHHHHHHTTEEEECCCCCCTTCTTC
T ss_pred             HhCcccHHHHHHHHHHHHhcCCCcccCCCHHHHHHHHHHhcCcEEEEcCCcCCHHHHHHHHhcCeeeeceeecCcccCcc
Confidence                9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHH
Q psy14589        476 TPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRD  554 (655)
Q Consensus       476 ~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~  554 (655)
                      |||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++     +++|+ |||||||.+
T Consensus       161 tpEPDi~HEl~GHvPlLadp~fA~f~q~iG~~sl~a~~e~i~~LarlYWfTVEFGL~~e~-----g~~KaYGAGlLSS~g  235 (307)
T d1j8ua_         161 TPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQG-----DSIKAYGAGLLSSFG  235 (307)
T ss_dssp             CSSCCHHHHHHHTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCEEEET-----TEEEECCHHHHTCHH
T ss_pred             ccchhHHHHHhCCccccCCHHHHHHHHHHHHHhccCCHHHHHHHhhhheeeEEeeeeccC-----CCceEecccccCCHH
Confidence            999999999999999999999999999999999999999999999999999999999999     99999 999999999


Q ss_pred             HHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeecccccC
Q psy14589        555 FLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHELLG  627 (655)
Q Consensus       555 ~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~~~~  627 (655)
                      |++|+.+     +.|-+..-+++++.++-.+           =-++.-++|.|..+.+.  ...++.||-++|  |++|+
T Consensus       236 El~~als~~~~~~pfd~~~~~~t~y~it~~Q-----------p~YFv~~Sfe~l~~~l~~f~~~~~rpf~~~y--~p~t~  302 (307)
T d1j8ua_         236 ELQYCLSEKPKLLPLELEKTAIQNYTVTEFQ-----------PLYYVAESFNDAKEKVRNFAATIPRPFSVRY--DPYTQ  302 (307)
T ss_dssp             HHHHHTSSSSEEEECCHHHHTTCCCCSSSCC-----------SEEEEESCHHHHHHHHHHHHTTSCCSSCEEE--ETTTT
T ss_pred             HHHHHcCCCCccCCCCHHHHhcCCCCCCCcC-----------CCeEEeCCHHHHHHHHHHHHHhcCCCCcccc--CCccc
Confidence            9999864     3444433444444433332           12344556666666666  366899999999  99999


Q ss_pred             ccccc
Q psy14589        628 HVPLF  632 (655)
Q Consensus       628 ~~~~~  632 (655)
                      +|-|+
T Consensus       303 ~v~~~  307 (307)
T d1j8ua_         303 RIEVL  307 (307)
T ss_dssp             EEEEC
T ss_pred             eEeeC
Confidence            99774

>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tryptophan hydroxylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-84  Score=659.04  Aligned_cols=228  Identities=62%  Similarity=0.982  Sum_probs=218.0

Q ss_pred             CCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-----------------------
Q psy14589        343 GVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-----------------------  399 (655)
Q Consensus       343 ~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-----------------------  399 (655)
                      +||||||+|+|||+|+|++|+||+||++|||||+|++||+||++||++|++||+|++                       
T Consensus         1 ~vpwfp~~~~dld~~~~~~~~~~~~l~~dhpgf~d~~yr~rR~~~a~~a~~~k~g~~ip~v~YT~eE~~~W~~l~~~l~~   80 (290)
T d1mlwa_           1 SVPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKVEFTEEEIKTWGTVFRELNK   80 (290)
T ss_dssp             CCCCCCSSGGGGGGTTTCCCBCSSCCCTTSTTTTCHHHHHHHHHHHHHHHHCCTTSCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHhhhhhccCcccCCCCCCCCChHHHHHHHHHHHHHHhCcCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999999999999998                       


Q ss_pred             -----cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCC
Q psy14589        400 -----LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPL  474 (655)
Q Consensus       400 -----Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~  474 (655)
                           ||++|++|+++|++.||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++|+
T Consensus        81 l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~~vs~~L~~~TGw~l~pV~Gli~~~~F~~~LA~rvFp~t~~IR~~~~~~  160 (290)
T d1mlwa_          81 LYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPF  160 (290)
T ss_dssp             HHHHHBCHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHTSCEEEECSSBCCHHHHHHHHTTTEEEECCCCCCTTCTT
T ss_pred             HHhccccHHHHHHHHHHHHhcCCCcccCCCHHHHHHHHHHhcCeEEEehhhhcCHHHHHHHHhCCeeeeeeeecCCCCCc
Confidence                 999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCH
Q psy14589        475 YTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSR  553 (655)
Q Consensus       475 y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~  553 (655)
                      ||||||||||++||+|||+||+||+|+|++|++++++++++|.+|+|+||||||||||+++     +++|+ |||||||.
T Consensus       161 YtpEPDi~HEl~GHvPlLadp~fA~f~q~~G~~~l~a~~e~i~~LarlyWfTVEFGLi~e~-----g~lK~YGAGlLSS~  235 (290)
T d1mlwa_         161 YTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQD-----GQLRVFGAGLLSSI  235 (290)
T ss_dssp             CCSSCCHHHHHHHTHHHHTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTTTCEEEET-----TEEEECCHHHHTCH
T ss_pred             cccchhHHHHHhCcccccCCHHHHHHHHHHHHHhhccCHHHHHHhhhhheeeEeeeEEecC-----CccEEEeceeccCH
Confidence            9999999999999999999999999999999999999999999999999999999999999     99999 99999999


Q ss_pred             HHHHhhhc-----ccccccccccCCCC
Q psy14589        554 DFLAGLAF-----RVFHSTQYIRHPSK  575 (655)
Q Consensus       554 ~~~~~l~~-----~~f~~~~~ir~~~~  575 (655)
                      +|++|+.+     +.|....-+++++.
T Consensus       236 gEl~~als~~~~~~pfd~~~~~~~~y~  262 (290)
T d1mlwa_         236 SELKHALSGHAKVKPFDPKITCKQECL  262 (290)
T ss_dssp             HHHHHHTSTTSEEEECCHHHHTTSCCC
T ss_pred             HHHHHHhcCCCCCCCCCHHHHhcCCCC
Confidence            99999964     34544444444444

>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Chromobacterium violaceum [TaxId: 536]

Probab=100.00  E-value=2.6e-58  Score=467.35  Aligned_cols=222  Identities=24%  Similarity=0.319  Sum_probs=184.2

Q ss_pred             CCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHH
Q psy14589        374 GFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFL  453 (655)
Q Consensus       374 gf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~  453 (655)
                      -+|++|-+-=|....+....++  +.||++|++|+++|    |++.++||||++||++|++.|||+++||+||||+++||
T Consensus        29 ~YT~~E~~vW~~l~~rq~~~l~--~~Ac~eyl~gL~~L----~l~~d~IPql~~in~~L~~~TGw~~~~V~Gli~~~~Ff  102 (277)
T d1ltza_          29 RYSAEDHATWATLYQRQCKLLP--GRACDEFLEGLERL----EVDADRVPDFNKLNEKLMAATGWKIVAVPGLIPDDVFF  102 (277)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHCT--TTBCHHHHHHHHHH----TCCSSSCCCHHHHHHHHHHHHSCEEEEESSCCCHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHc----CCCcccCCChHHHHHHHHHhcCeeEEecCCcCCHHHHH
Confidence            3666665555555555555442  34999999999999    99999999999999999999999999999999999999


Q ss_pred             HhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCCh-HHHHHHHhhhhhhhhhhhc
Q psy14589        454 AGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPD-EYVERLATSNNFMIVPRLA  532 (655)
Q Consensus       454 ~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~-~~i~~l~~l~w~tve~gl~  532 (655)
                      ++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+.++++.+ +++.+|+|+||||||||||
T Consensus       103 ~~LA~r~Fp~t~~IR~~~~~dYtpEPDifHd~~GHvPlL~np~fAdf~q~~G~~~~~a~~~~~l~~L~rlyWfTvEFGLi  182 (277)
T d1ltza_         103 EHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLINPVFADYLEAYGKGGVKAKALGALPMLARLYWYTVEFGLI  182 (277)
T ss_dssp             HHHHTTEEEEECSCCCTTCSSSCCSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHTTTTCEE
T ss_pred             HHHhcCeeeeeeeccCccccccccchhHHHHHhcCCccccCHHHHHHHHHHHHHHhhcCCHHHHHHHhhheeeeeeeeeE
Confidence            999999999999999999999999999999999999999999999999999999999955 7799999999999999999


Q ss_pred             cCCCCCCCCeEee-cccccCCHHHHHhhhc-----c-cccccccccCCC-----CCCCCCCcchhhhhcCCcccccCchH
Q psy14589        533 SLSPDSTGFSLRP-VAGLLSSRDFLAGLAF-----R-VFHSTQYIRHPS-----KPLYTPEPDVCHELLGHVPLFADPSF  600 (655)
Q Consensus       533 ~~~~~~tg~~~~~-g~Gllss~~~~~~l~~-----~-~f~~~~~ir~~~-----~~~y~~~pd~~hd~~ghvp~l~~p~f  600 (655)
                      +++     +++|+ |||||||.+|+.|+.+     + .|.+..-+++++     |+.|.. -|.|-+++--    +++-|
T Consensus       183 ~~~-----~~~kiYGAGiLSS~gE~~~~l~~~~~~~~pfd~~~v~~t~y~i~~~Q~~yFv-~~sfe~L~~~----~~~d~  252 (277)
T d1ltza_         183 NTP-----AGMRIYGAGILSSKSESIYCLDSASPNRVGFDLMRIMNTRYRIDTFQKTYFV-IDSFKQLFDA----TAPDF  252 (277)
T ss_dssp             EET-----TEEEECCHHHHTCHHHHHHTTSCSSSEEEECCHHHHHTBCCCSSSCCSEEEE-ESCHHHHHHC-------CC
T ss_pred             ccC-----CCcEEecccccCCHHHHHHHhcCCCCcccCCCHHHHhcCCCCcCCcCcccee-eCCHHHHHHH----HHHHH
Confidence            999     99999 9999999999999862     2 355554555554     444544 3666666432    35567


Q ss_pred             HHHHHHHhhcc
Q psy14589        601 AQFSQEIGLAS  611 (655)
Q Consensus       601 ~~~~~~~g~~~  611 (655)
                      +....+.+.++
T Consensus       253 ~~~~~~~~~~~  263 (277)
T d1ltza_         253 APLYLQLADAQ  263 (277)
T ss_dssp             HHHHHHHTTCC
T ss_pred             HHHHHHhhcCC
Confidence            77777665544

>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tryptophan hydroxylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-30  Score=263.33  Aligned_cols=148  Identities=50%  Similarity=0.774  Sum_probs=120.6

Q ss_pred             HHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhh----cCCCChHHHHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLA----SLGAPDEYVERL  519 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~----~l~~~~~~i~~l  519 (655)
                      |..++.+|.+.    .+=...-..+||+|-   |++   +-.+.+.....+..      ..|+.    .+|++.++||+|
T Consensus        42 R~~~a~~a~~~----k~g~~ip~v~YT~eE---~~~---W~~l~~~l~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql  111 (290)
T d1mlwa_          42 RKYFADLAMNY----KHGDPIPKVEFTEEE---IKT---WGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQL  111 (290)
T ss_dssp             HHHHHHHHHHC----CTTSCCCCCCCCHHH---HHH---HHHHHHHHHHHHHHHBCHHHHHHHHHHHHHHTCBTTBCCCH
T ss_pred             HHHHHHHHHhC----cCCCCCCCCCcCHHH---HHH---HHHHHHHHHHHHhccccHHHHHHHHHHHHhcCCCcccCCCH
Confidence            67888888765    222233456799988   666   33333333332222      22443    358999999999


Q ss_pred             HhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCch
Q psy14589        520 ATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS  599 (655)
Q Consensus       520 ~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~  599 (655)
                      .++|         +.+.+.|||++++|+||||+..|+++||+|+||+|+|||++++++||||||||||++||||||+||+
T Consensus       112 ~~vs---------~~L~~~TGw~l~pV~Gli~~~~F~~~LA~rvFp~t~~IR~~~~~~YtpEPDi~HEl~GHvPlLadp~  182 (290)
T d1mlwa_         112 EDVS---------NFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPS  182 (290)
T ss_dssp             HHHH---------HHHHHHTSCEEEECSSBCCHHHHHHHHTTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHHTSHH
T ss_pred             HHHH---------HHHHHhcCeEEEehhhhcCHHHHHHHHhCCeeeeeeeecCCCCCccccchhHHHHHhCcccccCCHH
Confidence            9999         5566789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCce
Q psy14589        600 FAQFSQEIGLASLGAPY  616 (655)
Q Consensus       600 f~~~~~~~g~~~~~a~~  616 (655)
                      ||||+|++|++|++|+.
T Consensus       183 fA~f~q~~G~~~l~a~~  199 (290)
T d1mlwa_         183 FAQFSQEIGLASLGASE  199 (290)
T ss_dssp             HHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHhhccCH
Confidence            99999999999999864

>d1ltza_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Chromobacterium violaceum [TaxId: 536]

Probab=99.95  E-value=8e-31  Score=265.11  Aligned_cols=130  Identities=29%  Similarity=0.455  Sum_probs=110.9

Q ss_pred             CCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEe
Q psy14589        471 SKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLR  544 (655)
Q Consensus       471 ~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~  544 (655)
                      ..-+||+|-   |++   |-.|.+.+...+.+      ..|+..||++.++||+|.++|         +.+.+.|||+++
T Consensus        26 ~~~~YT~~E---~~v---W~~l~~rq~~~l~~~Ac~eyl~gL~~L~l~~d~IPql~~in---------~~L~~~TGw~~~   90 (277)
T d1ltza_          26 PLDRYSAED---HAT---WATLYQRQCKLLPGRACDEFLEGLERLEVDADRVPDFNKLN---------EKLMAATGWKIV   90 (277)
T ss_dssp             CGGGCCHHH---HHH---HHHHHHHHHHHCTTTBCHHHHHHHHHHTCCSSSCCCHHHHH---------HHHHHHHSCEEE
T ss_pred             CcccCCHHH---HHH---HHHHHHHHHHHHhhhhhHHHHHHHHHcCCCcccCCChHHHH---------HHHHHhcCeeEE
Confidence            334688887   666   43343333332222      347777889999999999999         666778999999


Q ss_pred             ecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCc
Q psy14589        545 PVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAP  615 (655)
Q Consensus       545 ~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~  615 (655)
                      +|+||||...||++||+|+||+|+|||++++++|+||||||||++||+|||+||+||+|+|++|++|++|.
T Consensus        91 ~V~Gli~~~~Ff~~LA~r~Fp~t~~IR~~~~~dYtpEPDifHd~~GHvPlL~np~fAdf~q~~G~~~~~a~  161 (277)
T d1ltza_          91 AVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLINPVFADYLEAYGKGGVKAK  161 (277)
T ss_dssp             EESSCCCHHHHHHHHHTTEEEEECSCCCTTCSSSCCSCCHHHHHHHTGGGGGSHHHHHHHHHHHHHHHHCC
T ss_pred             ecCCcCCHHHHHHHHhcCeeeeeeeccCccccccccchhHHHHHhcCCccccCHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999973

>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Tyrosine hydroxylase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=4.5e-30  Score=263.49  Aligned_cols=145  Identities=49%  Similarity=0.775  Sum_probs=120.0

Q ss_pred             HHHHHhhhcCccceeeeccCC---CCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhc----CCCChHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHP---SKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLAS----LGAPDEYV  516 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~---~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~----l~~~~~~i  516 (655)
                      |.+++.+|++-       ||.   -..+||+|-   |++   |-.+.+.....+..      ..|+..    .|.+.++|
T Consensus        42 R~~~a~~a~~~-------~~g~piP~v~YT~eE---~~t---W~~l~~rl~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~I  108 (336)
T d1toha_          42 RKLIAEIAFQY-------KHGEPIPHVEYTAEE---IAT---WKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSI  108 (336)
T ss_dssp             HHHHHHHHHHC-------CTTSCCCCCCCCHHH---HHH---HHHHHHHHHHHHHHHBCHHHHHHHHHHHHHSCCBTTBC
T ss_pred             HHHHHHHHHhc-------cCCCCCCCcCcCHHH---HHH---HHHHHHHHHHHHhccccHHHHHHHHHHHHhcCCCcCCC
Confidence            67888888764       333   346788887   766   33333333332222      124444    48999999


Q ss_pred             HHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCccccc
Q psy14589        517 ERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFA  596 (655)
Q Consensus       517 ~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~  596 (655)
                      |+|.++|         +.+.+.|||++++|+||||+..|+++||+|+||+|+|||++++++||||||||||++||||||+
T Consensus       109 Pql~dvs---------~~L~~~TGw~l~pV~Gli~~r~F~~~LA~RvFp~TqyIR~~~~~~YtpEPDi~HEl~GHvPlLa  179 (336)
T d1toha_         109 PQLEDVS---------RFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLA  179 (336)
T ss_dssp             CCHHHHH---------HHHHHHTSCEEEECSSCCCHHHHHHHHTTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHHT
T ss_pred             CCHHHHH---------HHHHHhhCCEEEecCCcCCHHHHHHHHhcCccceeeeeccccccccccchhHHHHHhCcccccC
Confidence            9999999         6666779999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHhhcccCCce
Q psy14589        597 DPSFAQFSQEIGLASLGAPY  616 (655)
Q Consensus       597 ~p~f~~~~~~~g~~~~~a~~  616 (655)
                      ||+||||+|++|++|++|+.
T Consensus       180 dp~fA~f~q~~G~~sl~a~d  199 (336)
T d1toha_         180 DRTFAQFSQDIGLASLGASD  199 (336)
T ss_dssp             SHHHHHHHHHHHHHHTTCCH
T ss_pred             CHHHHHHHHHHHHHHhhcch
Confidence            99999999999999999963

>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
superfamily: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
family: Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
domain: Phenylalanine hydroxylase, PAH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-29  Score=256.36  Aligned_cols=148  Identities=51%  Similarity=0.780  Sum_probs=119.3

Q ss_pred             HHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhh----hcCCCChHHHHHH
Q psy14589        450 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGL----ASLGAPDEYVERL  519 (655)
Q Consensus       450 ~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl----~~l~~~~~~i~~l  519 (655)
                      |..++.+|.+.=    +=...-..+||+|-   |++   +-.+.+..-..+..      ..|+    +.+|.+.++||+|
T Consensus        41 R~~~a~~a~~~~----~g~piP~v~YT~eE---~~t---W~~v~~~l~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql  110 (307)
T d1j8ua_          41 RKQFADIAYNYR----HGQPIPRVEYMEEE---KKT---WGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQL  110 (307)
T ss_dssp             HHHHHHHHHHCC----TTSCCCCCCCCHHH---HHH---HHHHHHHHHHHHHHHBCHHHHHHHHHHHHHHCCBTTBCCCH
T ss_pred             HHHHHHHHHhcc----CCCCCCCCCcCHHH---HHH---HHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCCcccCCCH
Confidence            678888887641    11223345688887   666   33333333222222      1233    3458999999999


Q ss_pred             HhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCch
Q psy14589        520 ATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS  599 (655)
Q Consensus       520 ~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~  599 (655)
                      .++|         +.+.+.|||++++|+||||+..|+++||+|+||+|+|||++++++||||||||||++||||||+||+
T Consensus       111 ~dvs---------~~L~~~TGw~~~pV~Gli~~~~F~~~LA~RvFp~TqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp~  181 (307)
T d1j8ua_         111 EDVS---------QFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRS  181 (307)
T ss_dssp             HHHH---------HHHHHHHSCEEEECCSCCCHHHHHHHHHTTEEEECCCCCCTTCTTCCSSCCHHHHHHHTHHHHTSHH
T ss_pred             HHHH---------HHHHHhcCcEEEEcCCcCCHHHHHHHHhcCeeeeceeecCcccCccccchhHHHHHhCCccccCCHH
Confidence            9999         6666789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCce
Q psy14589        600 FAQFSQEIGLASLGAPY  616 (655)
Q Consensus       600 f~~~~~~~g~~~~~a~~  616 (655)
                      ||||+|++|++|++|+.
T Consensus       182 fA~f~q~iG~~sl~a~~  198 (307)
T d1j8ua_         182 FAQFSQEIGLASLGAPD  198 (307)
T ss_dssp             HHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHHhccCCH
Confidence            99999999999999974

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.9e-24  Score=206.65  Aligned_cols=125  Identities=17%  Similarity=0.082  Sum_probs=118.4

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +|+++||+++++++|||++|.+.+++ ++||+|+|+||+|++|++++|+||++|++|++++++++|++.++++||+++||
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l-~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEI-KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCC-CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCC-CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEE
Confidence            48999999999999999999998898 99999999999999999999999999999999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++   ++.+++++.++  ++|+|+|++|+++   +..++++++++||++.++
T Consensus        80 ~~~~---d~~~~v~~~t~g~g~d~v~d~~g~~~---~~~~~~~l~~~G~~v~~g  127 (179)
T d1qora2          80 YREE---DLVERLKEITGGKKVRVVYDSVGRDT---WERSLDCLQRRGLMVSFG  127 (179)
T ss_dssp             TTTS---CHHHHHHHHTTTCCEEEEEECSCGGG---HHHHHHTEEEEEEEEECC
T ss_pred             CCCC---CHHHHHHHHhCCCCeEEEEeCccHHH---HHHHHHHHhcCCeeeecc
Confidence            9885   78899998864  8999999999998   999999999999999876

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2e-24  Score=206.22  Aligned_cols=125  Identities=23%  Similarity=0.279  Sum_probs=117.2

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +|+++||+++++++|||+++.+.+++ ++||+|||+||+|+||++++|+||++|++||+++++++|++.++++|||+++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~-~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACV-KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCC-CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCC-CCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccccc
Confidence            57999999999999999999988898 99999999999999999999999999999999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++.   ++.+.+++.++  ++|+|+|++|++.   ++.++++++++||++.+|
T Consensus        80 ~~~~---~~~~~i~~~t~~~g~d~v~d~~g~~~---~~~~~~~l~~~G~iv~~G  127 (174)
T d1yb5a2          80 HREV---NYIDKIKKYVGEKGIDIIIEMLANVN---LSKDLSLLSHGGRVIVVG  127 (174)
T ss_dssp             TTST---THHHHHHHHHCTTCEEEEEESCHHHH---HHHHHHHEEEEEEEEECC
T ss_pred             cccc---cHHHHhhhhhccCCceEEeecccHHH---HHHHHhccCCCCEEEEEe
Confidence            9875   78888887743  8999999999888   999999999999999987

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=2.3e-24  Score=207.42  Aligned_cols=124  Identities=19%  Similarity=0.116  Sum_probs=107.5

Q ss_pred             CCHHhHhhhhhHHHHHHHH---hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE
Q psy14589         82 RDFLAGLAFRVFHSTQYIR---HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY  158 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~a---L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~  158 (655)
                      +|++|||++|++++|||++   +.+.+.. ++||+|||+||+||||++++|+||++|++|++++++++|.+.++++||++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~-~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLT-PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC-GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCC-CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccce
Confidence            5899999999999999966   4567887 89999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        159 VVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       159 vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|||++    ++.+.++..+ +++|+|+|++|++.   ++.++++|+++||++.+|
T Consensus        80 vi~~~~----~~~~~~~~~~~~gvD~vid~vgg~~---~~~~l~~l~~~Griv~~G  128 (176)
T d1xa0a2          80 VLARED----VMAERIRPLDKQRWAAAVDPVGGRT---LATVLSRMRYGGAVAVSG  128 (176)
T ss_dssp             EEECC-------------CCSCCEEEEEECSTTTT---HHHHHHTEEEEEEEEECS
T ss_pred             eeecch----hHHHHHHHhhccCcCEEEEcCCchh---HHHHHHHhCCCceEEEee
Confidence            999875    3444444443 39999999999999   999999999999999998

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=2.3e-23  Score=199.47  Aligned_cols=122  Identities=20%  Similarity=0.212  Sum_probs=115.1

Q ss_pred             HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCc
Q psy14589         85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTI  164 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~  164 (655)
                      +|||++|++++|||+++.+.+++ ++||+|||+||+|+||++++|+||++|++|++++++++|++.++++|+++++|+++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~-~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRL-SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCC-CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCC-CCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCc
Confidence            47999999999999999999998 99999999999999999999999999999999999999999999999999999887


Q ss_pred             cchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        165 RELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       165 ~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .   ++.+.+++.++  ++|+++|++|++.   ++.++++++++||+|.+|
T Consensus        80 ~---~~~~~v~~~t~~~g~d~v~d~~g~~~---~~~~~~~l~~~G~~v~~G  124 (183)
T d1pqwa_          80 V---DFADEILELTDGYGVDVVLNSLAGEA---IQRGVQILAPGGRFIELG  124 (183)
T ss_dssp             S---THHHHHHHHTTTCCEEEEEECCCTHH---HHHHHHTEEEEEEEEECS
T ss_pred             c---CHHHHHHHHhCCCCEEEEEecccchH---HHHHHHHhcCCCEEEEEc
Confidence            5   78888988764  8999999999988   999999999999999987

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=7.1e-22  Score=189.66  Aligned_cols=167  Identities=15%  Similarity=0.015  Sum_probs=133.4

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +++.+|+++|+++|||+++.+.+++ ++||+|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||+++||
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~-~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~   79 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPES-FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLN   79 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSC-CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCC-CCCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEe
Confidence            4667899999999999999988888 99999999998 9999999999999999 8999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhh
Q psy14589        162 HTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFY  238 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (655)
                      +++.+..+..+.+.+.++  ++|+||||+|++ +   ++.++++++++|+++++|..                       
T Consensus        80 ~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~---~~~a~~~l~~~G~iv~~G~~-----------------------  133 (182)
T d1vj0a2          80 RRETSVEERRKAIMDITHGRGADFILEATGDSRA---LLEGSELLRRGGFYSVAGVA-----------------------  133 (182)
T ss_dssp             TTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTH---HHHHHHHEEEEEEEEECCCC-----------------------
T ss_pred             ccccchHHHHHHHHHhhCCCCceEEeecCCchhH---HHHHHHHhcCCCEEEEEeec-----------------------
Confidence            987533345566666643  899999999987 6   89999999999999999831                       


Q ss_pred             hhheeecccccc--ccCC-CCCCCCeEEEEEEccCCCcchHHHHHHHHHhC
Q psy14589        239 FFYFLLLSQPLI--QSCH-SCPFSLFDFVIFSNHQDEVGALAKTLKLFKKH  286 (655)
Q Consensus       239 ~~~F~ll~~p~~--~~~~-~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~  286 (655)
                              .+..  +... .....+..++..+... .+..+.++++.++++
T Consensus       134 --------~~~~~~~~~~~~~l~~k~l~i~G~~~~-~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         134 --------VPQDPVPFKVYEWLVLKNATFKGIWVS-DTSHFVKTVSITSRN  175 (182)
T ss_dssp             --------SCCCCEEECHHHHTTTTTCEEEECCCC-CHHHHHHHHHHHHTC
T ss_pred             --------CCCCccccccHHHHHHCCcEEEEEEeC-CHHHHHHHHHHHHHC
Confidence                    1110  0000 0011234566666665 567888999988875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.9e-22  Score=190.09  Aligned_cols=166  Identities=15%  Similarity=0.030  Sum_probs=130.5

Q ss_pred             CCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE
Q psy14589         80 SSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV  159 (655)
Q Consensus        80 ~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v  159 (655)
                      |..+++++|+++|+++|+|++++ .+++ ++||+|+|.|+ |+||++++|+||++|+++++++++++|++.++++|||++
T Consensus         2 P~~~~a~~Apl~Cag~Tay~al~-~~~~-~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~   78 (168)
T d1uufa2           2 PQEQLAAVAPLLCAGITTYSPLR-HWQA-GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV   78 (168)
T ss_dssp             CGGGHHHHGGGGTHHHHHHHHHH-HTTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE
T ss_pred             CcccHHHHHHHHhHHHHHHHHHH-HhCC-CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEE
Confidence            45568889999999999999996 4788 99999999997 999999999999999999999999999999999999999


Q ss_pred             EeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhh
Q psy14589        160 VDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFY  238 (655)
Q Consensus       160 Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (655)
                      +|+.+.   +.   ..+..+++|+++|++|++ +   ++.++++++++|+++++|.                        
T Consensus        79 i~~~~~---~~---~~~~~~~~D~vid~~g~~~~---~~~~~~~l~~~G~iv~~G~------------------------  125 (168)
T d1uufa2          79 VNSRNA---DE---MAAHLKSFDFILNTVAAPHN---LDDFTTLLKRDGTMTLVGA------------------------  125 (168)
T ss_dssp             EETTCH---HH---HHTTTTCEEEEEECCSSCCC---HHHHHTTEEEEEEEEECCC------------------------
T ss_pred             EECchh---hH---HHHhcCCCceeeeeeecchh---HHHHHHHHhcCCEEEEecc------------------------
Confidence            998874   22   223334899999999987 7   8999999999999999972                        


Q ss_pred             hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCc
Q psy14589        239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNV  288 (655)
Q Consensus       239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~I  288 (655)
                            ...+...........+..++..+... ....+.++++++++++|
T Consensus       126 ------~~~~~~~~~~~~l~~k~~~i~Gs~~~-~~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         126 ------PATPHKSPEVFNLIMKRRAIAGSMIG-GIPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ------C-------CHHHHHTTTCEEEECCSC-CHHHHHHHHHHHHHHTC
T ss_pred             ------CCCCcccccHHHHHHCCcEEEEEeec-CHHHHHHHHHHHHHcCC
Confidence                  01110000000011234567766665 56789999999999886

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=3e-22  Score=191.06  Aligned_cols=120  Identities=21%  Similarity=0.158  Sum_probs=106.7

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +|++|||+++++++|||+++.+ +++ ++||+|+|+||+|+||++++|+||++|++|++++++++|++.++++|||+++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~-~~~-~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKR-AQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHH-TTC-CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCC-CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeee
Confidence            5799999999999999999976 688 99999999999999999999999999999999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+     ....+.. ..++|+|+|++| +.   +++++++++++|+++.+|
T Consensus        79 ~~~-----~~~~~~~-~~g~D~v~d~~G-~~---~~~~~~~l~~~G~~v~~G  120 (171)
T d1iz0a2          79 YAE-----VPERAKA-WGGLDLVLEVRG-KE---VEESLGLLAHGGRLVYIG  120 (171)
T ss_dssp             GGG-----HHHHHHH-TTSEEEEEECSC-TT---HHHHHTTEEEEEEEEEC-
T ss_pred             hhh-----hhhhhhc-cccccccccccc-hh---HHHHHHHHhcCCcEEEEe
Confidence            864     2333332 348999999987 56   789999999999999988

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.87  E-value=2e-22  Score=193.66  Aligned_cols=120  Identities=13%  Similarity=0.007  Sum_probs=109.6

Q ss_pred             HhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc
Q psy14589         87 GLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE  166 (655)
Q Consensus        87 AAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~  166 (655)
                      .++++++++|||+++.+.+++ ++||+|+|+||+|+||++++|+||.+|++||+++++++|.+.++++|++++||+.+. 
T Consensus         7 l~~lg~~glTA~~al~~~~~v-~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~-   84 (182)
T d1v3va2           7 LGTIGMPGLTAYFGLLEVCGV-KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTV-   84 (182)
T ss_dssp             GTTTSHHHHHHHHHHHTTTCC-CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSC-
T ss_pred             HHHHhhHHHHHHHHHHHHhCC-CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccc-
Confidence            368899999999999999999 999999999999999999999999999999999999999999999999999998875 


Q ss_pred             hhHHHHHHHhc-C-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        167 LDRFANQILSY-G-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       167 ~~d~~~~i~~~-~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        ++.+.+.+. . .++|+|+|++|++.   +++++++++++|+++.+|
T Consensus        85 --~~~~~~~~~~~~~Gvd~v~D~vG~~~---~~~~~~~l~~~G~~v~~G  128 (182)
T d1v3va2          85 --NSLEEALKKASPDGYDCYFDNVGGEF---LNTVLSQMKDFGKIAICG  128 (182)
T ss_dssp             --SCHHHHHHHHCTTCEEEEEESSCHHH---HHHHGGGEEEEEEEEECC
T ss_pred             --cHHHHHHHHhhcCCCceeEEecCchh---hhhhhhhccCCCeEEeec
Confidence              455555444 3 38999999999988   899999999999999998

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=3.1e-22  Score=190.09  Aligned_cols=167  Identities=13%  Similarity=-0.025  Sum_probs=130.6

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeC
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDH  162 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~  162 (655)
                      +.+.||+++|++.|+|+++++ .++ ++||+|+|.|+ |++|++++|+||++|++|++++++++|++.++++|||+++|+
T Consensus         2 p~e~AApl~cag~Ta~~al~~-~~~-~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~   78 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVR-NGC-GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIAT   78 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-TTC-STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-hCc-CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeec
Confidence            467789999999999999975 577 89999999998 999999999999999999999999999999999999999998


Q ss_pred             CccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhhe
Q psy14589        163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYF  242 (655)
Q Consensus       163 ~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F  242 (655)
                      .+..  ++   .++..+++|+++|++|+.....++.++++++++|+++.+|..                           
T Consensus        79 ~~~~--~~---~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~---------------------------  126 (168)
T d1piwa2          79 LEEG--DW---GEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP---------------------------  126 (168)
T ss_dssp             GGTS--CH---HHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC---------------------------
T ss_pred             cchH--HH---HHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccc---------------------------
Confidence            7531  23   334455899999998875211167899999999999999820                           


Q ss_pred             eeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcc
Q psy14589        243 LLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVN  289 (655)
Q Consensus       243 ~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~In  289 (655)
                         ..+. .........+..++..+... .+.++.++++++++++|+
T Consensus       127 ---~~~~-~~~~~~~~~k~~~i~Gs~~g-~~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         127 ---EQHE-MLSLKPYGLKAVSISYSALG-SIKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             ---CSSC-CEEECGGGCBSCEEEECCCC-CHHHHHHHHHHHHHTTCC
T ss_pred             ---cccc-cccHHHHHhCCcEEEEEeeC-CHHHHHHHHHHHHhCCCC
Confidence               1111 00011112234567777766 577899999999999985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=6.2e-22  Score=187.01  Aligned_cols=123  Identities=16%  Similarity=-0.027  Sum_probs=109.3

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +|+++||+++|+++|||+++++ .++ ++||+|+|.|+ |+||++++|+||++|++|++++++++|++.++++|||+++|
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~-~~~-~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~   77 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQ-TNA-RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVN   77 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-HTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCC-CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCcccccc
Confidence            4799999999999999999965 677 89999999998 99999999999999999999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +++.   +..+.+++.+.+.|.+++++|+. .   ++.++++++++|+++++|
T Consensus        78 ~~~~---~~~~~~~~~~~g~~~~i~~~~~~~~---~~~~~~~l~~~G~iv~~G  124 (166)
T d1llua2          78 ARQE---DPVEAIQRDIGGAHGVLVTAVSNSA---FGQAIGMARRGGTIALVG  124 (166)
T ss_dssp             TTTS---CHHHHHHHHHSSEEEEEECCSCHHH---HHHHHTTEEEEEEEEECC
T ss_pred             ccch---hHHHHHHHhhcCCcccccccccchH---HHHHHHHhcCCcEEEEEE
Confidence            8875   56677776655666666666665 6   899999999999999998

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.85  E-value=8.8e-22  Score=186.67  Aligned_cols=166  Identities=19%  Similarity=0.102  Sum_probs=133.3

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEE
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVV  160 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vI  160 (655)
                      +|+.|||+++|++.|||+++.+ .++ ++||+|+|+|++|++|++++|+++++|+ +|++++++++|++.++++||++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~-~~~-~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i   78 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRK-ASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVI   78 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-TTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCC-CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceee
Confidence            4789999999999999999865 677 8999999999989999999999999996 899999999999999999999999


Q ss_pred             eCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhh
Q psy14589        161 DHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFF  237 (655)
Q Consensus       161 d~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~  237 (655)
                      |+++.   ++.+.+++.+.  ++|+++||+|++ .   ++.++++++++|+++++|+.                      
T Consensus        79 ~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~---~~~a~~~l~~~G~iv~~G~~----------------------  130 (170)
T d1jvba2          79 NASMQ---DPLAEIRRITESKGVDAVIDLNNSEKT---LSVYPKALAKQGKYVMVGLF----------------------  130 (170)
T ss_dssp             ETTTS---CHHHHHHHHTTTSCEEEEEESCCCHHH---HTTGGGGEEEEEEEEECCSS----------------------
T ss_pred             ccCCc---CHHHHHHHHhhcccchhhhcccccchH---HHhhhhhcccCCEEEEeccc----------------------
Confidence            98875   67777777653  799999999987 6   78999999999999999820                      


Q ss_pred             hhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCC
Q psy14589        238 YFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHN  287 (655)
Q Consensus       238 ~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~  287 (655)
                              ..+. .........+..++..+... .+.++.++++++++++
T Consensus       131 --------~~~~-~~~~~~~~~k~i~i~Gs~~~-~~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         131 --------GADL-HYHAPLITLSEIQFVGSLVG-NQSDFLGIMRLAEAGK  170 (170)
T ss_dssp             --------CCCC-CCCHHHHHHHTCEEEECCSC-CHHHHHHHHHHHHTTS
T ss_pred             --------cCcc-ccCHHHHHhCCcEEEEEecC-CHHHHHHHHHHHHcCC
Confidence                    0100 00000000123566666655 5778999999998875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.85  E-value=1.7e-21  Score=186.62  Aligned_cols=123  Identities=12%  Similarity=0.037  Sum_probs=112.4

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEE
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVV  160 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vI  160 (655)
                      +++++|+.+++++.|||+++.. +++ ++||+|+|.|+ |+||++++|+||.+|+ +|++++++++|++.++++||+++|
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~-a~~-~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i   77 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAEL-ADI-EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDIL   77 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHH-TTC-CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHH-hCC-CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccc
Confidence            4688899999999999999854 788 99999999998 9999999999999998 799999999999999999999999


Q ss_pred             eCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        161 DHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       161 d~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+++.   ++.+.+++.++  |+|+||||+|++ .   +++++++++++|+++.+|
T Consensus        78 ~~~~~---~~~~~v~~~t~g~G~D~vid~~g~~~~---~~~a~~~~~~~G~iv~~G  127 (174)
T d1jqba2          78 NYKNG---HIEDQVMKLTNGKGVDRVIMAGGGSET---LSQAVKMVKPGGIISNIN  127 (174)
T ss_dssp             CGGGS---CHHHHHHHHTTTSCEEEEEECSSCTTH---HHHHHHHEEEEEEEEECC
T ss_pred             cccch---hHHHHHHHHhhccCcceEEEccCCHHH---HHHHHHHHhcCCEEEEEe
Confidence            99875   67788888764  799999999987 6   899999999999999998

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.85  E-value=1.2e-21  Score=189.56  Aligned_cols=128  Identities=19%  Similarity=0.137  Sum_probs=108.2

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEE-cCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHHHHhCCC
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFII-GANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAKAYGLGA  156 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~-GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~a~~LGA  156 (655)
                      +|+++||+++++++|||+++.+.+.+ ++|++|+|+ ||+|+||++++|+||++|++||++++++    ++.+.++++||
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~-~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKL-TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCC-CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCC-CCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc
Confidence            57999999999999999999999998 999988885 8889999999999999999999998664    34566789999


Q ss_pred             cEEEeCCccchhHHHHHHHhc----CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        157 DYVVDHTIRELDRFANQILSY----GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       157 d~vId~~~~~~~d~~~~i~~~----~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |++||++.....++.+.+++.    ++++|+|+|++|++.   +..++++|+++||+|.+|
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~---~~~~~~~l~~~G~~v~~G  137 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS---STGIARKLNNNGLMLTYG  137 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH---HHHHHHTSCTTCEEEECC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch---hhhhhhhhcCCcEEEEEC
Confidence            999998643212333444332    458999999999998   899999999999999998

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.84  E-value=3e-21  Score=181.96  Aligned_cols=167  Identities=17%  Similarity=0.004  Sum_probs=130.3

Q ss_pred             CCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +|+++||+++|+++|||++++. .++ ++||+|+|+|+ |+||++++|+||+.|++|++++++++|++.++++|++.++|
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~-~~~-~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~   77 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKV-TGA-KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVN   77 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-HTC-CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCC-CCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecc
Confidence            5799999999999999999975 466 89999999987 99999999999999999999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhh
Q psy14589        162 HTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFF  240 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (655)
                      +.+.   ++.+.+++.+.+.|.+++++++. .   ++.++++++++|+++++|...                        
T Consensus        78 ~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~---~~~a~~~l~~~G~i~~~g~~~------------------------  127 (168)
T d1rjwa2          78 PLKE---DAAKFMKEKVGGVHAAVVTAVSKPA---FQSAYNSIRRGGACVLVGLPP------------------------  127 (168)
T ss_dssp             TTTS---CHHHHHHHHHSSEEEEEESSCCHHH---HHHHHHHEEEEEEEEECCCCS------------------------
T ss_pred             cccc---hhhhhcccccCCCceEEeecCCHHH---HHHHHHHhccCCceEeccccc------------------------
Confidence            9875   67777777766555555666555 6   899999999999999987210                        


Q ss_pred             heeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcc
Q psy14589        241 YFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVN  289 (655)
Q Consensus       241 ~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~In  289 (655)
                            .+.. ......-.+..++..+... ....+.++++++++++|+
T Consensus       128 ------~~~~-~~~~~~~~~~~~i~gs~~~-~~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         128 ------EEMP-IPIFDTVLNGIKIIGSIVG-TRKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ------SEEE-EEHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTSCC
T ss_pred             ------CCCC-CCHHHHHHCCcEEEEEeeC-CHHHHHHHHHHHHhCCCC
Confidence                  0000 0000000112456655544 456799999999999874

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.84  E-value=2.8e-21  Score=183.91  Aligned_cols=163  Identities=16%  Similarity=-0.052  Sum_probs=129.1

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCC-CCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEE
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKP-LYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVV  160 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~-~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vI  160 (655)
                      .+.++|+++|+++|||+++.+.+ .+ ++||+|+|.|+ |++|++++|+||++|+ +|++++++++|++.++++|+++++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~-~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i   82 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTL-YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVV   82 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTC-CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEE
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhcc-CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceee
Confidence            46889999999999999998765 46 89999999998 9999999999999998 778889999999999999999999


Q ss_pred             eCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhh
Q psy14589        161 DHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFF  237 (655)
Q Consensus       161 d~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~  237 (655)
                      |+++.    ..+.+.+.+  .++|+|+|++|+. +   ++.++++++++||++++|..                      
T Consensus        83 ~~~~~----~~~~~~~~~~~~g~d~vid~~g~~~~---~~~a~~~l~~~G~iv~~G~~----------------------  133 (172)
T d1h2ba2          83 DARRD----PVKQVMELTRGRGVNVAMDFVGSQAT---VDYTPYLLGRMGRLIIVGYG----------------------  133 (172)
T ss_dssp             ETTSC----HHHHHHHHTTTCCEEEEEESSCCHHH---HHHGGGGEEEEEEEEECCCS----------------------
T ss_pred             cCccc----HHHHHHHhhCCCCceEEEEecCcchH---HHHHHHHHhCCCEEEEEeCc----------------------
Confidence            98863    334444443  3899999999987 6   89999999999999998820                      


Q ss_pred             hhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCC
Q psy14589        238 YFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHN  287 (655)
Q Consensus       238 ~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~  287 (655)
                              ....  ........+..++..+... .+..+.++|+++++++
T Consensus       134 --------~~~~--~~~~~l~~k~~~i~Gs~~~-~~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         134 --------GELR--FPTIRVISSEVSFEGSLVG-NYVELHELVTLALQGK  172 (172)
T ss_dssp             --------SCCC--CCHHHHHHTTCEEEECCSC-CHHHHHHHHHHHHTTS
T ss_pred             --------cccc--CCHHHHHhCCcEEEEEEec-CHHHHHHHHHHHHcCC
Confidence                    0000  0000001124677777666 5778999999998875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.84  E-value=9.3e-21  Score=181.27  Aligned_cols=124  Identities=15%  Similarity=0.015  Sum_probs=106.8

Q ss_pred             HHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeC
Q psy14589         84 FLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDH  162 (655)
Q Consensus        84 ~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~  162 (655)
                      +.|||.+.|++.|||+++.+.+++ ++||+|+|+|+ ||+|++++|+||++|+ +|++++++++|++.++++||+++||+
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~-~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~   79 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKV-TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNP   79 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCC-CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcC
Confidence            467999999999999999888898 99999999998 9999999999999998 79999999999999999999999998


Q ss_pred             CccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        163 TIRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       163 ~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      ++.+ +...+..+..++ ++|+|+|++|+. +   .+.++..++++ |+++++|
T Consensus        80 ~~~d-~~~~~~~~~~~~~G~d~vid~~g~~~~---~~~~~~~~~~~~G~~v~vG  129 (174)
T d1p0fa2          80 KDYD-KPIYEVICEKTNGGVDYAVECAGRIET---MMNALQSTYCGSGVTVVLG  129 (174)
T ss_dssp             GGCS-SCHHHHHHHHTTSCBSEEEECSCCHHH---HHHHHHTBCTTTCEEEECC
T ss_pred             CCch-hHHHHHHHHhcCCCCcEEEEcCCCchH---HHHHHHHHHHhcCceEEEE
Confidence            7642 113333444443 899999999998 5   78888888774 8999988

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=3.6e-21  Score=185.99  Aligned_cols=123  Identities=18%  Similarity=0.139  Sum_probs=105.4

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCC--CEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHH-HHhCCCcE
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEP--DTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAK-AYGLGADY  158 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~G--d~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~-a~~LGAd~  158 (655)
                      |+.. .|++++++|||+++.+.+++ ++|  |+|||+||+||||++++|+||.+|++ |++++.++++... ++++|||+
T Consensus         3 ~~~~-galg~~glTA~~~l~~~~~~-~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           3 SYFL-GAIGMPGLTSLIGVQEKGHI-SAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGG-TTTSHHHHHHHHHHHHHSCC-CTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             cHHH-HHhhcHHHHHHHHHHHHhCC-CCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            3443 35889999999999998888 877  89999999999999999999999995 6666667666554 56899999


Q ss_pred             EEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        159 VVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       159 vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +||++++   ++.+.+++.++ |+|+|+|++|++.   +++++++++++||++.+|
T Consensus        81 vi~~~~~---~~~~~~~~~~~~GvDvv~D~vGg~~---~~~~~~~l~~~G~iv~~G  130 (187)
T d1vj1a2          81 AVNYKTG---NVAEQLREACPGGVDVYFDNVGGDI---SNTVISQMNENSHIILCG  130 (187)
T ss_dssp             EEETTSS---CHHHHHHHHCTTCEEEEEESSCHHH---HHHHHTTEEEEEEEEEC-
T ss_pred             Eeeccch---hHHHHHHHHhccCceEEEecCCchh---HHHHhhhccccccEEEec
Confidence            9999986   67888888765 8999999999998   999999999999999998

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.83  E-value=1.1e-20  Score=180.46  Aligned_cols=123  Identities=15%  Similarity=0.018  Sum_probs=112.7

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +++.||+++|+..|||+++.+.+++ ++|++|+|.|+ |+||++++|+||++|+ +|++++++++|++.++++|+++++|
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~-~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~   79 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKV-TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN   79 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCC-CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCC-CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEe
Confidence            4677999999999999999999998 99999999998 9999999999999999 5677888999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++++   ++.+++++.++ ++|+|+||+|++ .   ++.++++++++|+++++|
T Consensus        80 ~~~~---~~~~~i~~~t~gg~D~vid~~G~~~~---~~~~~~~~~~~G~i~~~G  127 (174)
T d1f8fa2          80 SKTQ---DPVAAIKEITDGGVNFALESTGSPEI---LKQGVDALGILGKIAVVG  127 (174)
T ss_dssp             TTTS---CHHHHHHHHTTSCEEEEEECSCCHHH---HHHHHHTEEEEEEEEECC
T ss_pred             CCCc---CHHHHHHHHcCCCCcEEEEcCCcHHH---HHHHHhcccCceEEEEEe
Confidence            9875   78888888865 899999999987 6   899999999999999987

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=8.9e-22  Score=189.29  Aligned_cols=123  Identities=16%  Similarity=0.094  Sum_probs=106.3

Q ss_pred             CCHHhHhhhhhHHHHHHHHh---hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE
Q psy14589         82 RDFLAGLAFRVFHSTQYIRH---PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY  158 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL---~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~  158 (655)
                      +|+.+||+++++++|||+++   .+.+.. +.+++|||+||+||||++++|+||++|++||+++++++|.+.++++|||+
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~-~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVR-PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC-GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCC-CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcccc
Confidence            47899999999999999765   455555 67779999999999999999999999999999999999999999999999


Q ss_pred             EEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        159 VVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       159 vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +||+++.   ++.+.+.+  ...|.++|++|++.   ++.++++++++||+|.+|
T Consensus        80 vi~~~~~---~~~~~l~~--~~~~~vvD~Vgg~~---~~~~l~~l~~~Griv~~G  126 (177)
T d1o89a2          80 VLPRDEF---AESRPLEK--QVWAGAIDTVGDKV---LAKVLAQMNYGGCVAACG  126 (177)
T ss_dssp             EEEGGGS---SSCCSSCC--CCEEEEEESSCHHH---HHHHHHTEEEEEEEEECC
T ss_pred             ccccccH---HHHHHHHh--hcCCeeEEEcchHH---HHHHHHHhccccceEeec
Confidence            9998764   22222211  25799999999998   999999999999999998

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.83  E-value=1.4e-20  Score=178.72  Aligned_cols=126  Identities=13%  Similarity=0.034  Sum_probs=108.9

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      ++++||+++|++.|+|+++.+.+++ ++||+|+|+|+ ||+|++++|+||++|+ +|++++++++|++.++++||+++||
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~-~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~   79 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKL-EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN   79 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCC-CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEe
Confidence            4788999999999999999888999 99999999998 8999999999999997 7899999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+.. ++..+.+++.++ ++|+|+|++|++.  ..+.++.++++||+++.++
T Consensus        80 ~~~~~-~~~~~~~~~~~~~g~D~vid~~G~~~--~~~~~~~~~~~g~~~~~v~  129 (176)
T d2fzwa2          80 PQDFS-KPIQEVLIEMTDGGVDYSFECIGNVK--VMRAALEACHKGWGVSVVV  129 (176)
T ss_dssp             GGGCS-SCHHHHHHHHTTSCBSEEEECSCCHH--HHHHHHHTBCTTTCEEEEC
T ss_pred             CCchh-hHHHHHHHHHcCCCCcEeeecCCCHH--HHHHHHHhhcCCceeEEEE
Confidence            86532 234555555544 8999999999873  2788999999998988775

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.5e-20  Score=178.47  Aligned_cols=167  Identities=13%  Similarity=-0.006  Sum_probs=126.3

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      |+++ ||+.+++++|||++.+ +++ ++||+|+|.|+ |++|++++|+||++|+ +|++++++++|++.++++||+++++
T Consensus         2 S~e~-Aal~epla~a~~a~~~-~~~-~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           2 TFEE-GALIEPLSVGIHACRR-GGV-TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             CHHH-HHHHHHHHHHHHHHHH-HTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CHHH-HHHHHHHHHHHHHHHH-hCC-CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccc
Confidence            5666 4577899999999864 577 89999999998 9999999999999999 7999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhc-CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhh
Q psy14589        162 HTIRELDRFANQILSY-GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYF  239 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (655)
                      +.+.+..+..+.+... +.++|+|+||+|++ .   ++.++++++++|+++++|..                        
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~---~~~a~~~~~~gG~iv~~G~~------------------------  130 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEAS---IQAGIYATRSGGTLVLVGLG------------------------  130 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHH---HHHHHHHSCTTCEEEECSCC------------------------
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchh---HHHHHHHhcCCCEEEEEecC------------------------
Confidence            8865322233333322 44899999999988 6   89999999999999998820                        


Q ss_pred             hheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcc
Q psy14589        240 FYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVN  289 (655)
Q Consensus       240 ~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~In  289 (655)
                            ..+. .........+..++..+...  +..+.++++++++++||
T Consensus       131 ------~~~~-~~~~~~~~~k~l~i~Gs~~~--~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         131 ------SEMT-TVPLLHAAIREVDIKGVFRY--CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             ------CSCC-CCCHHHHHHTTCEEEECCSC--SSCHHHHHHHHHTTSCC
T ss_pred             ------CCCC-ccCHHHHHHCCcEEEEEeCC--HhHHHHHHHHHHcCCCC
Confidence                  1110 00000000123566665543  45789999999999986

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.82  E-value=3.7e-20  Score=177.20  Aligned_cols=124  Identities=14%  Similarity=0.008  Sum_probs=108.5

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +.++||.++|++.|+|+++.+.+++ ++||+|+|+|+ |+||++++|+||++|+ +|++++.+++|++.++++||++++|
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v-~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~   79 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKV-TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLN   79 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCC-CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccC
Confidence            4688999999999999999888999 99999999998 9999999999999999 7899999999999999999999999


Q ss_pred             CCccchhHHHHHHHh-c-CCCeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        162 HTIRELDRFANQILS-Y-GSELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~-~-~~gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +.+.+  +..+.+.+ . ++|+|+|+||+|++ +   +++++++++++ |+++++|
T Consensus        80 ~~~~~--~~~~~~~~~~~~~G~d~vie~~G~~~~---~~~a~~~~~~g~G~~v~vG  130 (174)
T d1e3ia2          80 PRELD--KPVQDVITELTAGGVDYSLDCAGTAQT---LKAAVDCTVLGWGSCTVVG  130 (174)
T ss_dssp             GGGCS--SCHHHHHHHHHTSCBSEEEESSCCHHH---HHHHHHTBCTTTCEEEECC
T ss_pred             Cccch--hhhhhhHhhhhcCCCcEEEEecccchH---HHHHHHHhhcCCeEEEecC
Confidence            76531  22333332 2 34899999999998 6   89999999996 9999998

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.81  E-value=9.5e-20  Score=172.32  Aligned_cols=124  Identities=17%  Similarity=0.019  Sum_probs=104.6

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeC
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDH  162 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~  162 (655)
                      |+++ ||+.++.+|||+++.+ .++ ++||+|+|+|+ |+||++++|+||++|++|++++++++|++.++++|++.++++
T Consensus         2 S~e~-Aal~ePla~a~~a~~~-~~~-~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           2 SLEE-GALLEPLSVGVHACRR-AGV-QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             CHHH-HHTHHHHHHHHHHHHH-HTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CHHH-HHHHHHHHHHHHHHHH-hCC-CCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEec
Confidence            5665 5567899999999864 567 89999999986 999999999999999999999999999999999999998865


Q ss_pred             Ccc--chhHHHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        163 TIR--ELDRFANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       163 ~~~--~~~d~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ...  +..+..+.+++.. +++|+|+||+|++ +   ++.++++++++|+++++|
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~---~~~a~~~~~~~G~iv~~G  129 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKC---ITIGINITRTGGTLMLVG  129 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHH---HHHHHHHSCTTCEEEECS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHH---HHHHHHHHhcCCceEEEe
Confidence            542  1223445555544 4899999999997 6   899999999999999988

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=6.2e-21  Score=181.65  Aligned_cols=115  Identities=17%  Similarity=0.152  Sum_probs=97.3

Q ss_pred             hhHHHHHHH---HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccch
Q psy14589         91 RVFHSTQYI---RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIREL  167 (655)
Q Consensus        91 ~~a~~TA~~---aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~  167 (655)
                      .++++|||.   +|.+.+.. ++|++|||+||+||||++++|+||++||+||+++++++|.+.++++|||+++|+++   
T Consensus         2 G~aGlTA~~a~~~L~~~g~~-~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~---   77 (167)
T d1tt7a2           2 GTAGFTAALSVHRLEQNGLS-PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISRED---   77 (167)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC-GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHH---
T ss_pred             CChHHHHHHHHHHHHHhcCC-CCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccc---
Confidence            356677774   56667776 78999999999999999999999999999999999999999999999999998753   


Q ss_pred             hHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        168 DRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       168 ~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       ...+.+.+.. +++|+|+|++|++.   +++++++|+++||++++|
T Consensus        78 -~~~~~~~~~~~~gvd~vid~vgg~~---~~~~~~~l~~~G~iv~~G  120 (167)
T d1tt7a2          78 -VYDGTLKALSKQQWQGAVDPVGGKQ---LASLLSKIQYGGSVAVSG  120 (167)
T ss_dssp             -HCSSCCCSSCCCCEEEEEESCCTHH---HHHHHTTEEEEEEEEECC
T ss_pred             -hhchhhhcccCCCceEEEecCcHHH---HHHHHHHhccCceEEEee
Confidence             1122222222 38999999999999   999999999999999998

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.79  E-value=1.7e-19  Score=171.27  Aligned_cols=123  Identities=18%  Similarity=0.068  Sum_probs=105.1

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      ++++||+++|++.|+|+++.+.+++ ++||+|+|+|+ ||+|++++|+++++|+ +|++++++++|++.++++|||++||
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~-k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in   79 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKV-EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN   79 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEEC
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCC-CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEc
Confidence            4788999999999999999888898 99999999998 9999999999999988 7999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhc--CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        162 HTIRELDRFANQILSY--GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~--~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+.+  +..+++.+.  .+++|+++|++|+. +   ++.++.+++++|.++++
T Consensus        80 ~~~~~--~~~~~~~~~~~~~G~d~vid~~G~~~~---~~~a~~~~~~g~~~~~~  128 (175)
T d1cdoa2          80 PNDHS--EPISQVLSKMTNGGVDFSLECVGNVGV---MRNALESCLKGWGVSVL  128 (175)
T ss_dssp             GGGCS--SCHHHHHHHHHTSCBSEEEECSCCHHH---HHHHHHTBCTTTCEEEE
T ss_pred             CCCcc--hhHHHHHHhhccCCcceeeeecCCHHH---HHHHHHHhhCCCcceeE
Confidence            87642  333444443  34899999999987 5   78888888887666554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.78  E-value=1.5e-19  Score=173.07  Aligned_cols=124  Identities=16%  Similarity=0.038  Sum_probs=107.4

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      +++.||.++|++.|+|+++.+.+++ ++||+|+|+|+ ||+|++++|+||++|+ +||+++.+++|++.++++||+++||
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~-~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in   80 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKV-KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCC-CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEEC
Confidence            4789999999999999999888888 99999999998 9999999999999996 8999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhc--CCCeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589        162 HTIRELDRFANQILSY--GSELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~--~~gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~  213 (655)
                      +++.+  +..+.+.+.  +.|+|+++|++|+. +   .+.++..++++ |+++.+|
T Consensus        81 ~~~~~--~~~~~~~~~~~g~G~d~vi~~~g~~~~---~~~a~~~~~~~~G~~v~vG  131 (176)
T d1d1ta2          81 PKDST--KPISEVLSEMTGNNVGYTFEVIGHLET---MIDALASCHMNYGTSVVVG  131 (176)
T ss_dssp             GGGCS--SCHHHHHHHHHTSCCCEEEECSCCHHH---HHHHHTTSCTTTCEEEECS
T ss_pred             ccccc--hHHHHHHHHhccccceEEEEeCCchHH---HHHHHHHhhcCCeEEEEEE
Confidence            87642  233444443  34899999999988 5   67777777655 9999987

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.78  E-value=8.2e-19  Score=167.01  Aligned_cols=126  Identities=16%  Similarity=0.025  Sum_probs=107.1

Q ss_pred             CHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEe
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVD  161 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId  161 (655)
                      ++++||+++|++.|+|+++.+.+++ ++||+|+|+|+ ||+|++++|+++++|+ +|++++++++|++.++++|+++++|
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~v-k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~   79 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKV-TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN   79 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCC-CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEe
Confidence            4788999999999999999999999 99999999999 9999999999999986 9999999999999999999999999


Q ss_pred             CCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        162 HTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       162 ~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+.+ +...+.++..+ +++|+++|++|++.  ..+.++..++++|+.++++
T Consensus        80 ~~~~~-~~~~~~~~~~~~~G~D~vid~~G~~~--~~~~a~~~~~~~~g~~~~~  129 (176)
T d2jhfa2          80 PQDYK-KPIQEVLTEMSNGGVDFSFEVIGRLD--TMVTALSCCQEAYGVSVIV  129 (176)
T ss_dssp             GGGCS-SCHHHHHHHHTTSCBSEEEECSCCHH--HHHHHHHHBCTTTCEEEEC
T ss_pred             cCCch-hHHHHHHHHHhcCCCCEEEecCCchh--HHHHHHHHHhcCCcceEEe
Confidence            76532 12333344433 48999999999883  2788999999987766665

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.77  E-value=9.7e-19  Score=170.23  Aligned_cols=123  Identities=16%  Similarity=0.011  Sum_probs=109.6

Q ss_pred             HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCC
Q psy14589         85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHT  163 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~  163 (655)
                      ++.++++++.+|||+++. .+++ ++||+|+|+|+ |+||++++|+||++|+ +|++++.+++|++.++++|+++++|+.
T Consensus         2 ~d~~~l~d~~~ta~~a~~-~a~v-~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~   78 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAV-TAGV-GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL   78 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHH-HTTC-CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTS
T ss_pred             chHHhcccHHHHHHHHHH-HhCC-CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCC
Confidence            578999999999999986 5788 99999999998 9999999999999998 899999999999999999999999988


Q ss_pred             ccchhHHHHHHHhcCC--CeeEEEeCCCcc-------------hHHHHHHHHHHhccccceEEEe
Q psy14589        164 IRELDRFANQILSYGS--ELDADHPGFTDP-------------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       164 ~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-------------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.   ++.+.+.+.++  ++|+++|++|.+             .-+.++.++++++++||++++|
T Consensus        79 ~~---~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G  140 (195)
T d1kola2          79 DT---PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG  140 (195)
T ss_dssp             SS---CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred             Cc---CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEee
Confidence            75   67788877743  899999999943             0123999999999999999998

>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Phenylalanine metabolism regulatory domain
domain: Prephenate dehydratase C-terminal domain
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.70  E-value=1.1e-17  Score=139.86  Aligned_cols=72  Identities=31%  Similarity=0.374  Sum_probs=66.8

Q ss_pred             EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccCCcEEEecCC
Q psy14589        265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSCSYINIISRN  337 (655)
Q Consensus       265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~~v~iLGs~  337 (655)
                      ++...+ +||+|+++|+.|++++||||+|||||+++.+|+|.||||++|  ++++++++++|++.|..+++||++
T Consensus         6 i~~~~d-~pGaL~~vL~~F~~~~INLt~IeSRP~~~~~~~Y~F~id~~g~~~~~~~~~l~~L~~~~~~~kvLGsY   79 (80)
T d2qmwa2           6 ITPMHD-KPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAF   79 (80)
T ss_dssp             EEESSC-CTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEESCCSCHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             EEeCCC-CCCHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEEecCCcHHHHHHHHHHHHhcCcEEEEEEe
Confidence            344445 999999999999999999999999999999999999999999  678999999999999999999984

>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Phenylalanine metabolism regulatory domain
domain: Phenylalanine hydroxylase N-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=1.6e-16  Score=137.29  Aligned_cols=80  Identities=40%  Similarity=0.523  Sum_probs=72.7

Q ss_pred             CCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccC-CcEE
Q psy14589        256 CPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSC-SYIN  332 (655)
Q Consensus       256 ~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~-~~v~  332 (655)
                      ....+|||++|+++| +||+|+++|+.|++++|||++|||||++...|+|.||||++|  ++.++.+++.|++.| ..++
T Consensus        11 ~~~~~ktSl~f~~~~-~pGaL~~vL~~f~~~~INLt~IeSRP~~~~~~~Y~F~id~eg~~~~~i~~~l~~L~~~~~~~v~   89 (97)
T d1phza1          11 SNQNGAISLIFSLKE-EVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSIIKSLRNDIGATVH   89 (97)
T ss_dssp             CCSSCCEEEEEEEEC-CTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBCGGGHHHHHHHHHHHHHTTCCCEE
T ss_pred             CCCCCcEEEEEEeCC-CCCHHHHHHHHHHHCCCCEEEEEeeccCCCCceEEEEEEcccCChHHHHHHHHHHHHhhCcEEE
Confidence            345569999999998 999999999999999999999999999999999999999999  788999999999875 5677


Q ss_pred             EecC
Q psy14589        333 IISR  336 (655)
Q Consensus       333 iLGs  336 (655)
                      +|+.
T Consensus        90 ~ls~   93 (97)
T d1phza1          90 ELSR   93 (97)
T ss_dssp             EEET
T ss_pred             Eccc
Confidence            7764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=2.6e-15  Score=124.25  Aligned_cols=74  Identities=20%  Similarity=0.200  Sum_probs=68.3

Q ss_pred             CCHHhHhhhhhHHHHHHHHhh---cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC
Q psy14589         82 RDFLAGLAFRVFHSTQYIRHP---SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus        82 ~s~~eAAal~~a~~TA~~aL~---~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA  156 (655)
                      +|+.||+++++++.|||+++.   +.... ++|++|+|+||+||||.+++|+||.+|++|++++++++|.+.++++||
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~-~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVR-PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC-GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhc-cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence            478999999999999998754   55666 899999999999999999999999999999999999999999999996

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.79  E-value=2.5e-05  Score=76.87  Aligned_cols=81  Identities=21%  Similarity=0.143  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +|++++|+||++|||...++.....|++|+.+++++++.+.++++++..+ .|.++.. .+++.+.+.+..+++|+++.+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   83 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN   83 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence            79999999999999999998888899999999999988888888776543 3444431 123344444434589999998


Q ss_pred             CCc
Q psy14589        188 FTD  190 (655)
Q Consensus       188 vG~  190 (655)
                      +|.
T Consensus        84 AG~   86 (248)
T d2d1ya1          84 AAI   86 (248)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=5.7e-05  Score=74.86  Aligned_cols=104  Identities=12%  Similarity=0.036  Sum_probs=70.3

Q ss_pred             CCCEE-EEEcCCCchHHHHHH-HHHHcCCeEEEEecChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTL-FIIGANRGNGLAAIQ-VGKAYGLTVFASVGCPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~V-LI~GasGgVG~~avQ-lAk~~Ga~Viat~~s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|.+| +|+||++|||..+++ +|+..|++|+.+++++++.+.+    ++.|.. .+  .|.++.. .+.+.+.+.+..+
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            36777 799999999998775 6777799999999999887664    334432 22  3444431 1234455555445


Q ss_pred             CeeEEEeCCCcc--------h---------------HHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP--------V---------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~--------~---------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+++.++|-.        .               +...+..+..|+++||+|.+.
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnis  137 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS  137 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence            899999998853        0               112334455668899999886

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.69  E-value=6.1e-05  Score=73.60  Aligned_cols=82  Identities=21%  Similarity=0.119  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +|++++|+||++|||...++.....|++|+.+++++++++.+ +++++..+ .|-++.+ .+.+.+.+.+..+++|+++.
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            689999999999999999998888999999999999888776 45676544 3444431 12233344433357999999


Q ss_pred             CCCcc
Q psy14589        187 GFTDP  191 (655)
Q Consensus       187 ~vG~~  191 (655)
                      ++|..
T Consensus        84 nAG~~   88 (242)
T d1ulsa_          84 YAGIT   88 (242)
T ss_dssp             CCCCC
T ss_pred             CCccc
Confidence            88753

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.67  E-value=0.0002  Score=67.15  Aligned_cols=79  Identities=5%  Similarity=-0.147  Sum_probs=59.3

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-----CC-CcEEEeCCccchhHHHHHHHhcC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-----LG-ADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-----LG-Ad~vId~~~~~~~d~~~~i~~~~  178 (655)
                      .++  +|++|+|+||+||||..+++.....|++|+.+++++++.+.+.+     .. .....|..+.      +.+.+.-
T Consensus        19 ~~l--~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~   90 (191)
T d1luaa1          19 GSV--KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD------ASRAEAV   90 (191)
T ss_dssp             SCC--TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH------HHHHHHT
T ss_pred             CCC--CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH------HHHHHHh
Confidence            355  89999999999999999999999999999999999988766532     12 2344565542      2333334


Q ss_pred             CCeeEEEeCCCcc
Q psy14589        179 SELDADHPGFTDP  191 (655)
Q Consensus       179 ~gvDvV~D~vG~~  191 (655)
                      +++|+++.++|..
T Consensus        91 ~~iDilin~Ag~g  103 (191)
T d1luaa1          91 KGAHFVFTAGAIG  103 (191)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             cCcCeeeecCccc
Confidence            5799999998753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=9.4e-05  Score=72.26  Aligned_cols=79  Identities=16%  Similarity=0.076  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE--EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV--VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+ ++++....  +|.++.  ++. +.+.+.-+++|+++.
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~--~~v-~~~~~~~g~iDilVn   82 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW--EAT-ERALGSVGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH--HHH-HHHHTTCCCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH--HHH-HHHHHHhCCceEEEe
Confidence            799999999999999999988888999999999999887765 45554333  354443  233 333333358999999


Q ss_pred             CCCcc
Q psy14589        187 GFTDP  191 (655)
Q Consensus       187 ~vG~~  191 (655)
                      ++|..
T Consensus        83 nAg~~   87 (244)
T d1pr9a_          83 NAAVA   87 (244)
T ss_dssp             CCCCC
T ss_pred             ccccc
Confidence            88764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.65  E-value=0.00011  Score=71.73  Aligned_cols=79  Identities=16%  Similarity=0.020  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE--EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV--VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+ ++++....  +|-++.  ++. +.+.+.-+++|+++.
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~--~~v-~~~~~~~g~iDilVn   80 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW--DAT-EKALGGIGPVDLLVN   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH--HHH-HHHHTTCCCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH--HHH-HHHHHHcCCCeEEEE
Confidence            799999999999999999988888999999999998887665 44543333  344442  233 333333358999999


Q ss_pred             CCCcc
Q psy14589        187 GFTDP  191 (655)
Q Consensus       187 ~vG~~  191 (655)
                      ++|..
T Consensus        81 nAg~~   85 (242)
T d1cyda_          81 NAALV   85 (242)
T ss_dssp             CCCCC
T ss_pred             CCccc
Confidence            88753

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=0.00013  Score=71.36  Aligned_cols=82  Identities=18%  Similarity=0.095  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      .|++++|+||++|||...+.-....|++|+.+++++++++.+    ++.|....   .|.++.. .+++.+.+.+..+++
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            899999999999999988877777899999999999887655    34565422   3444431 123444454555589


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+++.++|..
T Consensus        86 dilinnag~~   95 (244)
T d1yb1a_          86 SILVNNAGVV   95 (244)
T ss_dssp             SEEEECCCCC
T ss_pred             ceeEeecccc
Confidence            9999998865

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.60  E-value=8.9e-05  Score=72.61  Aligned_cols=85  Identities=13%  Similarity=-0.032  Sum_probs=61.4

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      +.+  +|++++|+||++|||.+.++.....|++|+.+++++++.+.+ .+++....   .|.++.. .+++.+.+.+..+
T Consensus         2 G~L--~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           2 GRL--TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             CTT--TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccc--CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            456  899999999999999999988888899999999999888765 45653322   3444431 1233444444445


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        80 ~idilinnAG~~   91 (244)
T d1nffa_          80 GLHVLVNNAGIL   91 (244)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCeEEEECCccc
Confidence            799999998864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=9.7e-05  Score=72.57  Aligned_cols=81  Identities=15%  Similarity=0.118  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYV--VDHTIRE-LDRFANQILSYGSELDADH  185 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~  185 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+.+ ++....  .|.++.. .+.+.+.+.+..+++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            79999999999999999998888889999999999988877754 443232  2444321 1223333433335799999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .++|.
T Consensus        85 nnAG~   89 (250)
T d1ydea1          85 NNAGH   89 (250)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98873

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.54  E-value=0.00011  Score=72.31  Aligned_cols=82  Identities=23%  Similarity=0.127  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+ +++|....   .|-++.. .+++.+.+.+..+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            799999999999999999988888899999999999887665 56764322   3444321 123334444433579999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus        84 VnnAg~~   90 (254)
T d1hdca_          84 VNNAGIS   90 (254)
T ss_dssp             EECCCCC
T ss_pred             EecCccc
Confidence            9988753

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.53  E-value=0.00021  Score=70.13  Aligned_cols=104  Identities=15%  Similarity=0.063  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHH----HHhCCCcEEE---eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAK----AYGLGADYVV---DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~----a~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++|||+||++|||.+.++.....|++|+.++++ +++.+.    +++.|.+...   |.++.+ .+++.+.+.+..++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999888899999876544 443333    3567765432   433321 12233334443457


Q ss_pred             eeEEEeCCCcc-----------------------hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP-----------------------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~-----------------------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++.++|..                       .+...+.++..++++|+++.+.
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence            99999998864                       1223455566677788877764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.52  E-value=0.00013  Score=71.16  Aligned_cols=82  Identities=20%  Similarity=0.115  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||++|||.+.++-....|++|+.++++.++++.+ +++|....   .|-++.+ .+++.+.+.+..+++|+.
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            799999999999999999998888999999999999887665 56786543   2444331 123344444444589999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus        84 innAg~~   90 (241)
T d2a4ka1          84 AHFAGVA   90 (241)
T ss_dssp             EEGGGGT
T ss_pred             ccccccc
Confidence            9987654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.51  E-value=9e-05  Score=72.87  Aligned_cols=82  Identities=20%  Similarity=0.119  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+ +++|....   .|-++.. .+++.+.+.+..+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            689999999999999999988888999999999998887665 56775433   3544431 122333443333589999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus        84 VnnAg~~   90 (256)
T d1k2wa_          84 VNNAALF   90 (256)
T ss_dssp             EECCCCC
T ss_pred             Eeecccc
Confidence            9998853

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.0001  Score=71.98  Aligned_cols=82  Identities=22%  Similarity=0.198  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc---EEEeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD---YVVDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd---~vId~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+. ++|..   ...|.++.. .+++.+.+.+..+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            6999999999999999999888888999999999998877664 45533   224554431 123444454445689999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus        83 VnnAg~~   89 (243)
T d1q7ba_          83 VNNAGIT   89 (243)
T ss_dssp             EECCCCC
T ss_pred             hhhhhhc
Confidence            9988754

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.50  E-value=0.00016  Score=70.88  Aligned_cols=82  Identities=16%  Similarity=0.131  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++.+.+     ++.|....   .|-++.. .+++.+.+.+..++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999988888899999999998876543     33465432   3544431 12334444444458


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|..
T Consensus        84 iDiLVnnAG~~   94 (251)
T d1vl8a_          84 LDTVVNAAGIN   94 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999998853

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.48  E-value=0.00014  Score=71.76  Aligned_cols=81  Identities=16%  Similarity=0.126  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC---CCcEE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL---GADYV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L---GAd~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+. ++   |....  .|.++.. .+++.+.+.+..+++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999888888999999999998877653 33   22222  2444431 1223333433335899


Q ss_pred             EEEeCCCc
Q psy14589        183 ADHPGFTD  190 (655)
Q Consensus       183 vV~D~vG~  190 (655)
                      +++.++|.
T Consensus        85 ~lVnnAG~   92 (268)
T d2bgka1          85 IMFGNVGV   92 (268)
T ss_dssp             EEEECCCC
T ss_pred             eecccccc
Confidence            99998874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.47  E-value=0.00017  Score=71.07  Aligned_cols=81  Identities=16%  Similarity=0.038  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+||++|||.++++.....|++|+.+++++++++.+    ++.|....   .|-++.. ..++.+.+.+..+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999888888899999999998887655    34565432   3444321 123334443333579


Q ss_pred             eEEEeCCCc
Q psy14589        182 DADHPGFTD  190 (655)
Q Consensus       182 DvV~D~vG~  190 (655)
                      |+++.++|.
T Consensus        84 DilVnnaG~   92 (260)
T d1zema1          84 DFLFNNAGY   92 (260)
T ss_dssp             CEEEECCCC
T ss_pred             Ceehhhhcc
Confidence            999998874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.00011  Score=71.92  Aligned_cols=79  Identities=16%  Similarity=0.015  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE--EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV--VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +|++++|+||++|||.+.++.....|++|+++++++++++.+.+......  .|...   .+..+.+.+..+++|+++.+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHCSCCSEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccc---cccccccccccccceeEEec
Confidence            79999999999999999999888899999999999988887765433333  22222   24445555545589999998


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      .|..
T Consensus        82 ag~~   85 (245)
T d2ag5a1          82 AGFV   85 (245)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.00013  Score=71.73  Aligned_cols=82  Identities=20%  Similarity=0.110  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+    ++.|....   .|-++.. .+++.+.+.+..+++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999988888899999999998876654    45665433   2443321 122334444433579


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+++.++|..
T Consensus        90 DilvnnAG~~   99 (255)
T d1fmca_          90 DILVNNAGGG   99 (255)
T ss_dssp             CEEEECCCCC
T ss_pred             CEeeeCCcCC
Confidence            9999998764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.46  E-value=0.00016  Score=71.66  Aligned_cols=82  Identities=18%  Similarity=0.161  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc------EEEeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD------YVVDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd------~vId~~~~~-~~d~~~~i~~~~  178 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+.    +.|..      ...|.++.. .+++.+.+.+..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999888889999999999998876653    34431      123544431 123344444444


Q ss_pred             CCeeEEEeCCCcc
Q psy14589        179 SELDADHPGFTDP  191 (655)
Q Consensus       179 ~gvDvV~D~vG~~  191 (655)
                      +++|+++.++|..
T Consensus        84 g~iDilvnnAG~~   96 (272)
T d1xkqa_          84 GKIDVLVNNAGAA   96 (272)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCceEEEeCCccc
Confidence            5899999998753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.44  E-value=0.00014  Score=68.22  Aligned_cols=99  Identities=16%  Similarity=0.207  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe-CCccc-h-----------h----HHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD-HTIRE-L-----------D----RFAN  172 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId-~~~~~-~-----------~----d~~~  172 (655)
                      ++-+|+|.|+ |-+|+.|++.|+.+||+|.+.|.++++++.++++|+..+-- ..... .           +    ...+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            4558999999 99999999999999999999999999999999999865410 00000 0           0    0111


Q ss_pred             HHHhcCCCeeEEEeCC---Ccc----hHHHHHHHHHHhccccceEEE
Q psy14589        173 QILSYGSELDADHPGF---TDP----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       173 ~i~~~~~gvDvV~D~v---G~~----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+.-...|+|+-++   |..    .   -++.++.|++|..+|=+
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~li---t~~mv~~Mk~GSVIVDv  150 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLI---TEEMVTKMKPGSVIIDL  150 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCS---CHHHHTTSCTTCEEEET
T ss_pred             HHHHHHHhhhhheeeeecCCcccceee---hHHHHHhcCCCcEEEEE
Confidence            2222223689999876   333    3   47889999999988775

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.43  E-value=0.00018  Score=71.43  Aligned_cols=81  Identities=17%  Similarity=0.121  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCc--EE----EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGAD--YV----VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd--~v----Id~~~~~-~~d~~~~i~~~~  178 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+    ++.|..  .+    .|.++.. .+++.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999988888899999999998887665    344432  22    3544431 123344444434


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        83 G~iDilVnnAG~   94 (274)
T d1xhla_          83 GKIDILVNNAGA   94 (274)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeeccc
Confidence            589999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.41  E-value=0.00028  Score=69.35  Aligned_cols=82  Identities=15%  Similarity=0.151  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcC-CC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYG-SE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~-~g  180 (655)
                      +|++|+|+||++|||.+.++.....|++|+.+++++++++.+    ++.|....   .|-++.+ .+++.+.+.+.. +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999988888999999999998776654    44565443   3444431 123344444443 46


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|..
T Consensus        85 idilinnag~~   95 (258)
T d1ae1a_          85 LNILVNNAGVV   95 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             cEEEecccccc
Confidence            89999988765

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.41  E-value=0.00043  Score=68.22  Aligned_cols=104  Identities=15%  Similarity=0.138  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHH----HHhCCCcEEE---eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAK----AYGLGADYVV---DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~----a~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+||++|||.+.++.....|++|+.++++. ++.+.    +++.|.+...   |..+.. ..++.+.+.+..++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            699999999999999999998888999999887764 33333    3566765543   333321 11233333333458


Q ss_pred             eeEEEeCCCcc--------h---------------HHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP--------V---------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~--------~---------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++.+.|..        .               +...+.++..|+++|+++.+.
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~  152 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG  152 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccc
Confidence            99999888754        1               122344555667788888775

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=0.00027  Score=69.38  Aligned_cols=82  Identities=18%  Similarity=0.125  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCC-cEEE----eCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGA-DYVV----DHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGA-d~vI----d~~~~~-~~d~~~~i~~~~~  179 (655)
                      +|++|||+||++|||.+.++.....|++|+.+++++++++.+    ++.|. ..++    |-+++. .+.+.+.+.+..+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999988888899999999999887664    33442 2332    444431 1234444544445


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        89 ~iD~lVnnAg~~  100 (257)
T d1xg5a_          89 GVDICINNAGLA  100 (257)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEeccccc
Confidence            899999998864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.39  E-value=0.00019  Score=70.38  Aligned_cols=82  Identities=13%  Similarity=0.039  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEEE---eCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYVV---DHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+ +++|...+.   |.++.. .+++.+.+.+..+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            799999999999999999988888999999999999887765 456654442   333321 123344444444589999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus        85 VnnAG~~   91 (253)
T d1hxha_          85 VNNAGIL   91 (253)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9999853

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.39  E-value=0.00026  Score=69.59  Aligned_cols=80  Identities=14%  Similarity=0.091  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h--CCCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G--LGADYV---VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~--LGAd~v---Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+.    +  .|....   .|.++.. .+++.+.+.+..+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999888889999999999998876542    1  232221   2555431 1233344444345


Q ss_pred             CeeEEEeCCC
Q psy14589        180 ELDADHPGFT  189 (655)
Q Consensus       180 gvDvV~D~vG  189 (655)
                      ++|+++.++|
T Consensus        83 ~iDiLVnnAG   92 (258)
T d1iy8a_          83 RIDGFFNNAG   92 (258)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999887

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.38  E-value=0.00031  Score=68.85  Aligned_cols=81  Identities=17%  Similarity=0.216  Sum_probs=58.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      |+.+||+||++|||.+.++.....|++|+.+++++++++.+    ++.|....   .|-++.. .+++.+.+.+..+++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            67789999999999999988888899999999998877654    45565432   3444431 1234444444456899


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      +++.++|..
T Consensus        82 ilVnnAG~~   90 (257)
T d2rhca1          82 VLVNNAGRP   90 (257)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999998854

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.38  E-value=0.00015  Score=72.03  Aligned_cols=81  Identities=19%  Similarity=0.123  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+ +++|....   .|.++.. .+++.+.+.+..+++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            699999999999999999988888899999999999888665 45554322   2444321 122333333334579999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        84 vnnAG~   89 (276)
T d1bdba_          84 IPNAGI   89 (276)
T ss_dssp             ECCCCC
T ss_pred             cccccc
Confidence            998873

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.37  E-value=0.00019  Score=70.49  Aligned_cols=82  Identities=18%  Similarity=0.153  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-----YGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|+++||+||++|||.+.++.....|++|+.+++++++++.+     ++.|....   .|.++.+ .+++.+.+.+..++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            799999999999999999988888999999999988766443     33454332   3444431 12344444444568


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.+.|..
T Consensus        88 iDilVnnAg~~   98 (260)
T d1h5qa_          88 ISGLIANAGVS   98 (260)
T ss_dssp             EEEEEECCCCC
T ss_pred             CcEeccccccc
Confidence            99999988743

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.36  E-value=0.00036  Score=68.58  Aligned_cols=82  Identities=16%  Similarity=0.162  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhc-CCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSY-GSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~-~~g  180 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+    ++.|....   .|.++.. .+++.+.+.+. ++.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999988888899999999998887655    34454332   3444321 12233344333 337


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|..
T Consensus        87 idilvnnAG~~   97 (259)
T d2ae2a_          87 LNILVNNAGIV   97 (259)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceEEEECCcee
Confidence            99999998853

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.36  E-value=0.00026  Score=69.33  Aligned_cols=82  Identities=17%  Similarity=0.136  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv  181 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+    ++.|....   .|.++.. .+.+.+.+.+..+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            789999999999999999887778899999999998877654    45665432   3444431 123444444445689


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+++.+.|..
T Consensus        89 Dilvnnag~~   98 (251)
T d2c07a1          89 DILVNNAGIT   98 (251)
T ss_dssp             CEEEECCCCC
T ss_pred             eeeeeccccc
Confidence            9999888754

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.34  E-value=0.00027  Score=69.56  Aligned_cols=81  Identities=19%  Similarity=0.117  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc--EE----EeCCccc-hhHHHHHHHhcC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD--YV----VDHTIRE-LDRFANQILSYG  178 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd--~v----Id~~~~~-~~d~~~~i~~~~  178 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+.    +.|..  .+    .|.++.. .+++.+.+.+..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999888888999999999988876653    34421  12    3554431 123334444434


Q ss_pred             CCeeEEEeCCCc
Q psy14589        179 SELDADHPGFTD  190 (655)
Q Consensus       179 ~gvDvV~D~vG~  190 (655)
                      +++|+++.++|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            589999999885

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00026  Score=69.35  Aligned_cols=82  Identities=15%  Similarity=-0.007  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC-----CCcE---EEeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL-----GADY---VVDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L-----GAd~---vId~~~~~-~~d~~~~i~~~~~  179 (655)
                      .|++++|+||++|||.+.++.....|++|+.+++++++.+.+. ++     |...   ..|.++.. .+++.+.+.+.-+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999988889999999999988876553 21     2221   13554431 1233344444335


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        82 ~iDilVnnAg~~   93 (254)
T d2gdza1          82 RLDILVNNAGVN   93 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CcCeeccccccc
Confidence            899999999876

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00036  Score=70.07  Aligned_cols=82  Identities=12%  Similarity=0.056  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h--------CCCcEE---EeCCccc-hhHHHHHHHh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G--------LGADYV---VDHTIRE-LDRFANQILS  176 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~--------LGAd~v---Id~~~~~-~~d~~~~i~~  176 (655)
                      +|++++|+||++|||.+.++.....|++|+++++++++++.+. +        .|...+   .|.++.. .+++.+.+.+
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            8999999999999999999888888999999999988776542 1        133222   2444331 1233334444


Q ss_pred             cCCCeeEEEeCCCcc
Q psy14589        177 YGSELDADHPGFTDP  191 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~  191 (655)
                      ..+++|+++.++|..
T Consensus        91 ~~G~iDiLVnnAg~~  105 (297)
T d1yxma1          91 TFGKINFLVNNGGGQ  105 (297)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCeEEEEeecccc
Confidence            345799999988753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.30  E-value=0.00019  Score=70.28  Aligned_cols=82  Identities=15%  Similarity=0.033  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC--Cc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG--AD-YV--VDHTIRE-LDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG--Ad-~v--Id~~~~~-~~d~~~~i~~~~~gvD  182 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+. +++  .. ..  .|.++.. .+++.+.+.+.-+++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            7999999999999999999888888999999999998877664 332  11 22  2444431 1234444444445899


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      +++.++|..
T Consensus        85 iLVnnAg~~   93 (251)
T d1zk4a1          85 TLVNNAGIA   93 (251)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999988764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.29  E-value=0.00047  Score=63.59  Aligned_cols=92  Identities=12%  Similarity=0.008  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc--EEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD--YVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd--~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ++-+|+|.|+ |-+|+.|++.|+.+||.|.+.|.+.++++.++.....  ..+...+   +.+.+.+.    ..|+|+-+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~----~aDivI~a  102 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA----EADLLIGA  102 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH----TCSEEEEC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhc----cCcEEEEe
Confidence            4668999999 9999999999999999999999999999888765322  2222222   24555555    57999988


Q ss_pred             C---Ccc----hHHHHHHHHHHhccccceEEE
Q psy14589        188 F---TDP----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       188 v---G~~----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +   |.+    .   -+..++.||+|..+|=+
T Consensus       103 alipG~~aP~lI---t~~mv~~Mk~GSVIVDv  131 (168)
T d1pjca1         103 VLVPGRRAPILV---PASLVEQMRTGSVIVDV  131 (168)
T ss_dssp             CCCTTSSCCCCB---CHHHHTTSCTTCEEEET
T ss_pred             eecCCcccCeee---cHHHHhhcCCCcEEEEe
Confidence            7   332    3   37889999999888775

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.28  E-value=0.00031  Score=69.25  Aligned_cols=82  Identities=13%  Similarity=0.070  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHH----HHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVA----KAYGLGADYV---VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~----~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+||++|||.+.++.....|++|++++++.+ +.+    .+++.|....   .|.++.. .+++.+.+.+..++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999988877788999999998753 333    3356675433   2444431 12333444443358


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|..
T Consensus        86 iDiLVnnAG~~   96 (261)
T d1geea_          86 LDVMINNAGLE   96 (261)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEeeccceec
Confidence            99999988754

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.27  E-value=0.00043  Score=66.87  Aligned_cols=74  Identities=22%  Similarity=0.207  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      +|+++||+||++|||.+.++.....|++|+.++++++++   ++.|...+. |.++    +. +.+.+.-+.+|+++.++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l---~~~~~~~~~~Dv~~----~~-~~~~~~~g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---KRSGHRYVVCDLRK----DL-DLLFEKVKEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHTCSEEEECCTTT----CH-HHHHHHSCCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---HhcCCcEEEcchHH----HH-HHHHHHhCCCcEEEecc
Confidence            689999999999999999998888999999999987654   455554433 3322    22 33334344799999998


Q ss_pred             Ccc
Q psy14589        189 TDP  191 (655)
Q Consensus       189 G~~  191 (655)
                      |..
T Consensus        75 G~~   77 (234)
T d1o5ia_          75 GGP   77 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.25  E-value=0.00066  Score=67.34  Aligned_cols=82  Identities=10%  Similarity=0.093  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-----hCCCcE-EE--eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-----GLGADY-VV--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-----~LGAd~-vI--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      .|++++|+||+||||.++++.....|++|+.+++++++.+.+.     +.|... ++  |..+.. .+++.+.+.+..++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            7899999999999999999888889999999999988765432     234332 22  333321 11233344444568


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.+.|..
T Consensus       104 iDilvnnAg~~  114 (294)
T d1w6ua_         104 PNIVINNAAGN  114 (294)
T ss_dssp             CSEEEECCCCC
T ss_pred             cchhhhhhhhc
Confidence            99999998865

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.23  E-value=0.00053  Score=66.84  Aligned_cols=82  Identities=18%  Similarity=0.108  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLGADYV---VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++  .+.++++|....   .|-++.. .+.+.+.+.+..+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            78999999999999999998888899999999987643  233467775433   2444431 12333444443458999


Q ss_pred             EEeCCCcc
Q psy14589        184 DHPGFTDP  191 (655)
Q Consensus       184 V~D~vG~~  191 (655)
                      ++.++|..
T Consensus        84 lVnnAG~~   91 (247)
T d2ew8a1          84 LVNNAGIY   91 (247)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99998863

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.20  E-value=0.00065  Score=66.42  Aligned_cols=79  Identities=18%  Similarity=0.042  Sum_probs=55.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD  184 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV  184 (655)
                      .++|+||++|||.+.++.....|++|+.+++++++++.+    ++.|....   .|-++.+ .+++.+.+.+..+++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            469999999999998887777899999999999887654    45565432   3444431 123444444445589999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +.++|..
T Consensus        83 VnnAG~~   89 (255)
T d1gega_          83 VNNAGVA   89 (255)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9988753

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.18  E-value=0.0002  Score=68.51  Aligned_cols=98  Identities=16%  Similarity=0.005  Sum_probs=66.7

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      ..++ ++|++||-.|+  |.|..++.+|+..|  .+|++++.+++..+.+++    .|.+.+.-...    +..+.. ..
T Consensus        70 ~l~l-~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~----d~~~~~-~~  141 (213)
T d1dl5a1          70 WVGL-DKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG----DGYYGV-PE  141 (213)
T ss_dssp             HTTC-CTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CGGGCC-GG
T ss_pred             hhhc-cccceEEEecC--ccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC----chHHcc-cc
Confidence            3467 89999999997  44778888999876  489999999987777643    45544332111    111100 11


Q ss_pred             CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        178 GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+|+|+.+.+-. .   .+..++.|++||++|+.
T Consensus       142 ~~~fD~I~~~~~~~~~---p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         142 FSPYDVIFVTVGVDEV---PETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             GCCEEEEEECSBBSCC---CHHHHHHEEEEEEEEEE
T ss_pred             ccchhhhhhhccHHHh---HHHHHHhcCCCcEEEEE
Confidence            22699999776555 3   46778999999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.15  E-value=0.00087  Score=65.75  Aligned_cols=82  Identities=17%  Similarity=0.301  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE---EEeCCccc-hhHHHHHHHhc-CCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY---VVDHTIRE-LDRFANQILSY-GSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~---vId~~~~~-~~d~~~~i~~~-~~g  180 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++++++.+.    +.+...   ..|.++.+ .+.+.+.+.+. ++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999888888999999999988876652    334332   23444431 12233334333 456


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|..
T Consensus        87 idilvnnAG~~   97 (259)
T d1xq1a_          87 LDILINNLGAI   97 (259)
T ss_dssp             CSEEEEECCC-
T ss_pred             ccccccccccc
Confidence            99999998853

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00026  Score=66.47  Aligned_cols=98  Identities=17%  Similarity=0.080  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      ..++|+|+||+|.+|..+++.+...|.+|++++|+++|++.....++..+. |..+.  +++.+.+    .++|+|+.++
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~--~~l~~al----~~~d~vi~~~   75 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQA--ADVDKTV----AGQDAVIVLL   75 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSH--HHHHHHH----TTCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccch--hhHHHHh----cCCCEEEEEe
Confidence            357899999999999999988888899999999999886555556665543 33321  2333333    2689999999


Q ss_pred             Ccc--------hHHHHHHHHHHhcccc--ceEEEe
Q psy14589        189 TDP--------VYRARRKYFADLAFNY--KHFFFF  213 (655)
Q Consensus       189 G~~--------~~~~l~~~l~~l~~gG--rlv~v~  213 (655)
                      |..        ........++.++..|  |+|.++
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~s  110 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT  110 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEe
Confidence            853        1011234455555554  555553

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.11  E-value=0.00032  Score=68.80  Aligned_cols=82  Identities=13%  Similarity=0.037  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEE----EeCCcc-c-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYV----VDHTIR-E-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~v----Id~~~~-~-~~d~~~~i~~~~~  179 (655)
                      +|++|+|+||++|||..++......|++|++++++.++.+.+.+    .+-..+    .|.... . ..++.+.+.+..+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            79999999999999999888777789999888777665544422    232222    233321 1 1233444444445


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        84 ~iDilvnnAG~~   95 (254)
T d1sbya1          84 TVDILINGAGIL   95 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEeCCCCC
Confidence            899999999876

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.08  E-value=0.001  Score=66.89  Aligned_cols=81  Identities=16%  Similarity=0.066  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC---------hHHHHH----HHhCCCcEEEeCCccc-hhHHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC---------PVGVAK----AYGLGADYVVDHTIRE-LDRFANQIL  175 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s---------~~k~~~----a~~LGAd~vId~~~~~-~~d~~~~i~  175 (655)
                      +|++++|+||++|||.+.++.....|++|+.++++         +++.+.    ....+.....|..+.. .+.+.+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            79999999999999999998888899999988654         223332    2445666667766532 123444444


Q ss_pred             hcCCCeeEEEeCCCc
Q psy14589        176 SYGSELDADHPGFTD  190 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~  190 (655)
                      +..+++|+++.++|.
T Consensus        86 ~~~G~iDiLVnNAGi  100 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGI  100 (302)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCcc
Confidence            445689999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.04  E-value=0.0014  Score=63.74  Aligned_cols=82  Identities=21%  Similarity=0.123  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEEE--eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYVV--DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~vI--d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+||+|  |||.+.++.....|++|+.++++++..+.+    ...|....+  |.++.. .+++.+.+.+..++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            799999999987  899988887777899999999887655443    334544444  333321 12333444444458


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.++|..
T Consensus        87 iDilVnnag~~   97 (256)
T d1ulua_          87 LDYLVHAIAFA   97 (256)
T ss_dssp             EEEEEECCCCC
T ss_pred             ceEEEeccccc
Confidence            99999998753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.04  E-value=0.00066  Score=66.48  Aligned_cols=82  Identities=13%  Similarity=0.101  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHHH-----hCCCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKAY-----GLGADYV---VDHTIRE-LDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a~-----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~  179 (655)
                      +|++++|+||++|||.+.++.....|++|+.+++++ ++.+.+.     ..|....   .|-++.. .+++.+.+.+..+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999887778899999999864 4444332     2344333   2444421 1233444444445


Q ss_pred             CeeEEEeCCCcc
Q psy14589        180 ELDADHPGFTDP  191 (655)
Q Consensus       180 gvDvV~D~vG~~  191 (655)
                      ++|+++.++|..
T Consensus        83 ~iDiLVnnAG~~   94 (260)
T d1x1ta1          83 RIDILVNNAGIQ   94 (260)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCcEEEeecccc
Confidence            899999998853

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.03  E-value=0.0004  Score=67.54  Aligned_cols=81  Identities=22%  Similarity=0.223  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcE--E--EeCCccc-hhHHHHHHHhc-CC-C
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADY--V--VDHTIRE-LDRFANQILSY-GS-E  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~--v--Id~~~~~-~~d~~~~i~~~-~~-g  180 (655)
                      ..++|||+||++|||...++.....|+  +|+++++++++++.+++.....  +  +|.++.. .+++.+.+.+. +. +
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            357999999999999998876666786  6899999999888887653322  2  3444431 12344444443 22 6


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.++|.
T Consensus        82 idilinnAG~   91 (250)
T d1yo6a1          82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             eEEEEEcCcc
Confidence            9999999884

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.0006  Score=67.07  Aligned_cols=81  Identities=15%  Similarity=0.067  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-----CCCcEEE---eCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-----LGADYVV---DHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-----LGAd~vI---d~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|++++|+|||+|||.+.++.....|++|+.+++++++++.+.+     .|.....   |..+.. .....+.+.+..+.
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   92 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG   92 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence            79999999999999999988877789999999999998877632     3332222   222111 11222333333447


Q ss_pred             eeEEEeCCCc
Q psy14589        181 LDADHPGFTD  190 (655)
Q Consensus       181 vDvV~D~vG~  190 (655)
                      +|+++.+.|.
T Consensus        93 ~~~li~nag~  102 (269)
T d1xu9a_          93 LDMLILNHIT  102 (269)
T ss_dssp             CSEEEECCCC
T ss_pred             cccccccccc
Confidence            8888877654

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.98  E-value=0.00087  Score=66.97  Aligned_cols=105  Identities=11%  Similarity=-0.010  Sum_probs=72.0

Q ss_pred             HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHH
Q psy14589         99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQI  174 (655)
Q Consensus        99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i  174 (655)
                      ..+.+..++ ++|++||=.|+  |.|..++.+|+..|++|++++.|++..+.+++    .|-..-++....   |+    
T Consensus        52 ~~~~~~l~l-~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~---d~----  121 (285)
T d1kpga_          52 DLALGKLGL-QPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA---GW----  121 (285)
T ss_dssp             HHHHTTTTC-CTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES---CG----
T ss_pred             HHHHHHcCC-CCCCEEEEecC--cchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh---hh----
Confidence            345567788 99999999998  78889999999999999999999988777643    332211111111   11    


Q ss_pred             HhcCCCeeEE-----EeCCCcchH-HHHHHHHHHhccccceEEEe
Q psy14589        175 LSYGSELDAD-----HPGFTDPVY-RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~gvDvV-----~D~vG~~~~-~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +...+.+|.|     ++.+|...+ +.+..+.++|+|||++++-.
T Consensus       122 ~~~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         122 EQFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             GGCCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             hcccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            1122356655     356665522 34778889999999999854

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.93  E-value=0.00011  Score=71.53  Aligned_cols=78  Identities=22%  Similarity=0.175  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .|++++|+||++|||.+.++.....|++|+++++++++.+.+..    ...|.++.. .+++.+.+.+..+++|+++.++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~----~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnA   81 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   81 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEE----EECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceE----EEEecCCHHHHHHHHHHHHHhcCCceEEEeee
Confidence            79999999999999999998888899999999998765443221    224555431 1233444444445799999988


Q ss_pred             Ccc
Q psy14589        189 TDP  191 (655)
Q Consensus       189 G~~  191 (655)
                      |..
T Consensus        82 G~~   84 (237)
T d1uzma1          82 GLS   84 (237)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.91  E-value=0.00036  Score=67.01  Aligned_cols=97  Identities=14%  Similarity=0.030  Sum_probs=67.4

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHHHhcCCCe
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      ++ ++|++||..|+  |.|-.++-+|+..|.+|++++..++-.+.+    +++|.+.+.-...    |..+.. ...+.+
T Consensus        75 ~l-~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g----d~~~g~-~~~~pf  146 (215)
T d1jg1a_          75 NL-KPGMNILEVGT--GSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG----DGSKGF-PPKAPY  146 (215)
T ss_dssp             TC-CTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CGGGCC-GGGCCE
T ss_pred             cc-CccceEEEecC--CCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC----ccccCC-cccCcc
Confidence            56 89999999996  667778888888898899999987655554    4578776643222    111101 112379


Q ss_pred             eEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        182 DADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       182 DvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |.|+-+.+.+.  .-+..++.|++|||+|..
T Consensus       147 D~Iiv~~a~~~--ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         147 DVIIVTAGAPK--IPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             EEEEECSBBSS--CCHHHHHTEEEEEEEEEE
T ss_pred             eeEEeeccccc--CCHHHHHhcCCCCEEEEE
Confidence            99987665552  036778899999999985

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.88  E-value=0.00059  Score=67.00  Aligned_cols=101  Identities=16%  Similarity=0.098  Sum_probs=68.2

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----C-CCcEEEeCCccchhHHHHHHH
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----L-GADYVVDHTIRELDRFANQIL  175 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----L-GAd~vId~~~~~~~d~~~~i~  175 (655)
                      ...++ ++|++||=.|+  |.|.+++.+|++.|  .+|++++.+++..+.|++    . +.+.+--.. .   |+.+.+.
T Consensus        79 ~~l~i-~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~-~---Di~~~~~  151 (250)
T d1yb2a1          79 MRCGL-RPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR-S---DIADFIS  151 (250)
T ss_dssp             --CCC-CTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC-S---CTTTCCC
T ss_pred             HHcCC-CCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE-e---eeecccc
Confidence            34677 89999999898  45678888999875  489999999988887753    3 333321111 1   2211111


Q ss_pred             hcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        176 SYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        ...+|.|+-.+..+ ++.++.+.++|++||+++.+.
T Consensus       152 --~~~fD~V~ld~p~p-~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         152 --DQMYDAVIADIPDP-WNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             --SCCEEEEEECCSCG-GGSHHHHHHTEEEEEEEEEEE
T ss_pred             --cceeeeeeecCCch-HHHHHHHHHhcCCCceEEEEe
Confidence              12699988656554 233899999999999998764

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.81  E-value=0.001  Score=66.55  Aligned_cols=105  Identities=15%  Similarity=0.104  Sum_probs=71.5

Q ss_pred             HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHH
Q psy14589         99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQI  174 (655)
Q Consensus        99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i  174 (655)
                      ..+.+..++ ++|++||=.|+  |.|..+..+|+..|++|++++.|++..+.+    ++.|....+.....   +.    
T Consensus        51 ~~~~~~l~l-~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~---d~----  120 (291)
T d1kpia_          51 KLALDKLNL-EPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ---GW----  120 (291)
T ss_dssp             HHHHHTTCC-CTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC---CG----
T ss_pred             HHHHHhcCC-CCCCEEEEecC--cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh---cc----
Confidence            345567788 99999998898  667788899999999999999999876554    44565433322111   11    


Q ss_pred             HhcCCCeeEEE-----eCCCc-------chH-HHHHHHHHHhccccceEEEe
Q psy14589        175 LSYGSELDADH-----PGFTD-------PVY-RARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       175 ~~~~~gvDvV~-----D~vG~-------~~~-~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ....+.+|.|+     +.++.       +.+ .-++.+-+.|+|||++++=.
T Consensus       121 ~~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         121 EEFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GGCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             cccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            11223688764     45543       111 34788889999999998754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.80  E-value=0.0025  Score=62.06  Aligned_cols=82  Identities=16%  Similarity=0.064  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV--VDHTIRE-LDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g  180 (655)
                      +|+++||+||+|  |||.+.++.....|++|+.++++++..+.++    +.+...+  .|..... ..++.+.+.+..++
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            699999999877  8999999888889999999998864333332    2232222  2333321 12233444444558


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      +|+++.+.|..
T Consensus        84 id~lV~nag~~   94 (274)
T d2pd4a1          84 LDFIVHSVAFA   94 (274)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCeEEeecccc
Confidence            99999888865

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.79  E-value=0.00089  Score=65.26  Aligned_cols=76  Identities=9%  Similarity=-0.094  Sum_probs=54.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      |++|+||++|||...++.....|++|++++++.++++.+++    ...-.+.+..+  .+++.+.+.+.-+++|+++.+.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~--~~~~~~~~~~~~G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAYGQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHH--HHHHHHHHHHHcCCCCEEEECC
Confidence            78999999999999888777789999999998887776643    33333444332  2345555555545899999776


Q ss_pred             Cc
Q psy14589        189 TD  190 (655)
Q Consensus       189 G~  190 (655)
                      |.
T Consensus        80 g~   81 (252)
T d1zmta1          80 IF   81 (252)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.77  E-value=0.004  Score=56.57  Aligned_cols=75  Identities=16%  Similarity=0.191  Sum_probs=58.2

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHH-HHHhCCCcEEEeCCccchhHHHHHHHhcCCCe
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVA-KAYGLGADYVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~-~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .+++  .+.+|+|.|+ |.+|.++++..+..|+ ++.++.|+.+|.+ .++++|+. ++++.     ++.+.+.    .+
T Consensus        19 ~~~l--~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~-----~~~~~l~----~~   85 (159)
T d1gpja2          19 LGSL--HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD-----ELVDHLA----RS   85 (159)
T ss_dssp             HSCC--TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG-----GHHHHHH----TC
T ss_pred             hCCc--ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch-----hHHHHhc----cC
Confidence            3566  8899999999 9999999998888998 6888888877765 45677754 44443     4555555    58


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      |+|+.|++++
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999999886

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.71  E-value=0.00072  Score=66.91  Aligned_cols=98  Identities=19%  Similarity=0.138  Sum_probs=69.5

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCc-EE-EeCCccchhHHHHHHH
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGAD-YV-VDHTIRELDRFANQIL  175 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd-~v-Id~~~~~~~d~~~~i~  175 (655)
                      ..++ ++|++||=.|+  |.|.+++.+|++.|  ++|++++.+++..+.|+    ..|.. .+ +...+     ...   
T Consensus        98 ~l~i-~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d-----~~~---  166 (266)
T d1o54a_          98 MLDV-KEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD-----ISE---  166 (266)
T ss_dssp             HTTC-CTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC-----GGG---
T ss_pred             hhCC-CCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc-----ccc---
Confidence            3567 89999999898  45778889999875  59999999998887774    35642 22 22221     110   


Q ss_pred             hc-CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        176 SY-GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~-~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .. ...+|.|+-.++.+ ++.++.+.++||+||+++.+.
T Consensus       167 ~~~~~~~D~V~~d~p~p-~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         167 GFDEKDVDALFLDVPDP-WNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             CCSCCSEEEEEECCSCG-GGTHHHHHHHEEEEEEEEEEE
T ss_pred             cccccceeeeEecCCCH-HHHHHHHHhhcCCCCEEEEEe
Confidence            11 12689888777665 233899999999999999864

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.68  E-value=0.0016  Score=64.67  Aligned_cols=105  Identities=12%  Similarity=0.076  Sum_probs=70.3

Q ss_pred             HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHH
Q psy14589         98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus        98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~  173 (655)
                      +..+.+..++ ++|++||=.|+  |.|.++..+++..|++|++++.|++..+.++    +.|....+.....   +.   
T Consensus        41 ~~~~~~~l~l-~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~---d~---  111 (280)
T d2fk8a1          41 VDLNLDKLDL-KPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ---GW---  111 (280)
T ss_dssp             HHHHHTTSCC-CTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES---CG---
T ss_pred             HHHHHHHcCC-CCCCEEEEecC--CchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh---hh---
Confidence            4445567788 99999999998  4455778899999999999999998877664    3453322211111   11   


Q ss_pred             HHhcCCCeeEEE-----eCCCcchH-HHHHHHHHHhccccceEEE
Q psy14589        174 ILSYGSELDADH-----PGFTDPVY-RARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       174 i~~~~~gvDvV~-----D~vG~~~~-~~l~~~l~~l~~gGrlv~v  212 (655)
                       ++..+.+|.|+     +.+|.+.+ .-++.+-+.|+|||++++-
T Consensus       112 -~~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         112 -EDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             -GGCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             -hhhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence             11233577763     45554422 3367888999999999874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.62  E-value=0.0037  Score=56.64  Aligned_cols=101  Identities=8%  Similarity=-0.115  Sum_probs=64.2

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC----CCc------EEEeCCc-----cchhHH
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL----GAD------YVVDHTI-----RELDRF  170 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L----GAd------~vId~~~-----~~~~d~  170 (655)
                      .+ ++|.+||..|+  |.|..++-+|+ .|++|++++.|++-++.+++.    +..      ...+...     .+..++
T Consensus        17 ~~-~~~~rvLd~GC--G~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l   92 (201)
T d1pjza_          17 NV-VPGARVLVPLC--GKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   92 (201)
T ss_dssp             CC-CTTCEEEETTT--CCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             CC-CCCCEEEEecC--cCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccc
Confidence            35 79999999998  67789999997 499999999999988888652    110      1111000     000001


Q ss_pred             HHHHHhcCCCeeEEEeCCCcc------hHHHHHHHHHHhccccceEEEe
Q psy14589        171 ANQILSYGSELDADHPGFTDP------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       171 ~~~i~~~~~gvDvV~D~vG~~------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ....   ...+|+|++...-.      ....++...+.|++||++++..
T Consensus        93 ~~~~---~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          93 TARD---IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             THHH---HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccc---ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            0011   11589988744322      1133677888999999988764

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.61  E-value=0.0032  Score=61.68  Aligned_cols=95  Identities=14%  Similarity=0.073  Sum_probs=63.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      ++|++||=.|+++  |..++.++| +|++|++++.+++..+.++    ..|....+-..     +..+.. . .+.+|+|
T Consensus       119 ~~g~~VLDiGcGs--G~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~-----d~~~~~-~-~~~fD~V  188 (254)
T d2nxca1         119 RPGDKVLDLGTGS--GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG-----SLEAAL-P-FGPFDLL  188 (254)
T ss_dssp             CTTCEEEEETCTT--SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES-----CHHHHG-G-GCCEEEE
T ss_pred             CccCEEEEcccch--hHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEec-----cccccc-c-ccccchh
Confidence            6899999889844  556666555 6999999999998777765    35543322111     222221 1 2379999


Q ss_pred             EeCCCcch-HHHHHHHHHHhccccceEEEe
Q psy14589        185 HPGFTDPV-YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       185 ~D~vG~~~-~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +-...... .+.+....++|+|||++++.|
T Consensus       189 ~ani~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         189 VANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            86655442 233567778999999999877

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.59  E-value=0.0032  Score=60.85  Aligned_cols=78  Identities=19%  Similarity=0.098  Sum_probs=54.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCe-------EEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLT-------VFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSY  177 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~-------Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~  177 (655)
                      .|||+||++|||.+.++.....|++       |+..++++++++.+    ++.|....   .|.++.. .+++.+.+.+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999888777777887       88899998877665    34565322   2555431 12344455555


Q ss_pred             CCCeeEEEeCCCc
Q psy14589        178 GSELDADHPGFTD  190 (655)
Q Consensus       178 ~~gvDvV~D~vG~  190 (655)
                      .+++|+++.+.|.
T Consensus        83 ~g~iDilvnnAg~   95 (240)
T d2bd0a1          83 YGHIDCLVNNAGV   95 (240)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCcceeeccccc
Confidence            5689999999885

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0025  Score=64.74  Aligned_cols=135  Identities=15%  Similarity=0.058  Sum_probs=88.2

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHh----CC-----------CcEE-EeCCccc
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYG----LG-----------ADYV-VDHTIRE  166 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~----LG-----------Ad~v-Id~~~~~  166 (655)
                      .++ ++|++||=.|+  |.|.+++.+|++.|.  +|++.+.+++..+.|++    .|           .+.+ +...+- 
T Consensus        94 l~i-~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di-  169 (324)
T d2b25a1          94 MDI-NPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI-  169 (324)
T ss_dssp             HTC-CTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT-
T ss_pred             hCC-CCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecch-
Confidence            356 89999998887  558899999999875  89999999988877753    11           1222 111110 


Q ss_pred             hhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeecc
Q psy14589        167 LDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLS  246 (655)
Q Consensus       167 ~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~  246 (655)
                       .+....+.  ...+|.|+=-+..+ |+.+..+.++|++||+++.+.                                 
T Consensus       170 -~~~~~~~~--~~~fD~V~LD~p~P-~~~l~~~~~~LKpGG~lv~~~---------------------------------  212 (324)
T d2b25a1         170 -SGATEDIK--SLTFDAVALDMLNP-HVTLPVFYPHLKHGGVCAVYV---------------------------------  212 (324)
T ss_dssp             -TCCC---------EEEEEECSSST-TTTHHHHGGGEEEEEEEEEEE---------------------------------
T ss_pred             -hhcccccC--CCCcceEeecCcCH-HHHHHHHHHhccCCCEEEEEe---------------------------------
Confidence             01111111  12588876445544 223899999999999988753                                 


Q ss_pred             ccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcc
Q psy14589        247 QPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENN  304 (655)
Q Consensus       247 ~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~  304 (655)
                       |                       ...++.++++.+++.+.....|++.-...+.|+
T Consensus       213 -P-----------------------~i~Qv~~~~~~l~~~~~~f~~i~~~E~~~R~w~  246 (324)
T d2b25a1         213 -V-----------------------NITQVIELLDGIRTCELALSCEKISEVIVRDWL  246 (324)
T ss_dssp             -S-----------------------SHHHHHHHHHHHHHHTCCEEEEEEECCCCCCEE
T ss_pred             -C-----------------------CHHHHHHHHHHHHHcCCCceeeEEEEEEeeeeE
Confidence             1                       134677888888888877777877766667765

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.58  E-value=0.0025  Score=61.23  Aligned_cols=76  Identities=18%  Similarity=0.086  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc---hhHHHHHHHhc-C-CCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE---LDRFANQILSY-G-SELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~---~~d~~~~i~~~-~-~gvDvV  184 (655)
                      +|++|+|+||+||||...++.....|++|+.+++++.+..     .....+......   .+...+.+.+. . +++|++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            5899999999999999999998899999999987654321     111122111110   11223333332 2 379999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.++|.
T Consensus        76 InnAG~   81 (236)
T d1dhra_          76 LCVAGG   81 (236)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0045  Score=59.59  Aligned_cols=82  Identities=11%  Similarity=0.045  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHH---HHHHHhcCCC
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRF---ANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~---~~~i~~~~~g  180 (655)
                      +|++|||+||+|  |+|.+++......|++|+.++++++..+.+    ...|....+........+.   .+.+.+..+.
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            799999999988  888888887778899999999987655444    3355544443222211122   2223333457


Q ss_pred             eeEEEeCCCcc
Q psy14589        181 LDADHPGFTDP  191 (655)
Q Consensus       181 vDvV~D~vG~~  191 (655)
                      .|+.+++++..
T Consensus        84 ~d~~v~~a~~~   94 (258)
T d1qsga_          84 FDGFVHSIGFA   94 (258)
T ss_dssp             EEEEEECCCCC
T ss_pred             cceEEEeeccc
Confidence            89999887654

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.50  E-value=0.0025  Score=60.24  Aligned_cols=95  Identities=14%  Similarity=0.006  Sum_probs=69.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      +++.+||=.|+  |.|..+..+++ .|++|++++.+++-++.+++.+....+.....   ++    .-..+.+|+|+-..
T Consensus        41 ~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~---~l----~~~~~~fD~ii~~~  110 (246)
T d2avna1          41 KNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAE---DL----PFPSGAFEAVLALG  110 (246)
T ss_dssp             CSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTT---SC----CSCTTCEEEEEECS
T ss_pred             CCCCEEEEECC--CCchhcccccc-cceEEEEeeccccccccccccccccccccccc---cc----ccccccccceeeec
Confidence            57889998898  57888888887 59999999999999999998777766654322   11    11123799988543


Q ss_pred             Cc-----chHHHHHHHHHHhccccceEEEe
Q psy14589        189 TD-----PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~-----~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..     +..+.+..+.++|++||.+++..
T Consensus       111 ~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~~  140 (246)
T d2avna1         111 DVLSYVENKDKAFSEIRRVLVPDGLLIATV  140 (246)
T ss_dssp             SHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             chhhhhhhHHHHHHHHHhhcCcCcEEEEEE
Confidence            22     22244778889999999988764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.48  E-value=0.0037  Score=57.69  Aligned_cols=99  Identities=13%  Similarity=0.051  Sum_probs=64.9

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-EEEeCCccchhHHHHHHHhcCCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-YVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      ++ ++|++||=.|+  |.|..++.+|+. +.+|++++.+++.++.++    +.|.. .+ .....   +..+.... ...
T Consensus        30 ~~-~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~g---da~~~~~~-~~~  100 (186)
T d1l3ia_          30 EP-GKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEG---DAPEALCK-IPD  100 (186)
T ss_dssp             CC-CTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEES---CHHHHHTT-SCC
T ss_pred             CC-CCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcce-EEEEC---chhhcccc-cCC
Confidence            45 79999997787  455666777764 669999999998777764    46642 32 11111   22222222 237


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+|+-..+.. ..+.++.+.+.|++||++++..
T Consensus       101 ~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            89887654433 3345788889999999998764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.43  E-value=0.00081  Score=65.18  Aligned_cols=79  Identities=15%  Similarity=0.174  Sum_probs=51.7

Q ss_pred             CEEEEEcCCCchHHHHHH-HHH--HcCCeEEEEecChHHHHHHHh----CCCcEE--EeCCccc-hhHHHHHHHhc--CC
Q psy14589        112 DTLFIIGANRGNGLAAIQ-VGK--AYGLTVFASVGCPVGVAKAYG----LGADYV--VDHTIRE-LDRFANQILSY--GS  179 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQ-lAk--~~Ga~Viat~~s~~k~~~a~~----LGAd~v--Id~~~~~-~~d~~~~i~~~--~~  179 (655)
                      ++|||+||++|||...++ +++  ..|++|+++++++++.+.+++    .+--.+  +|.++.. .+++.+.+++.  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            589999999999998775 443  358999999999887665542    222222  3544431 12344444332  23


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      ++|+++.+.|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            79999988774

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0017  Score=62.30  Aligned_cols=95  Identities=16%  Similarity=0.071  Sum_probs=63.2

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----CCC-----c--EEEeCCccchhHHH
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----LGA-----D--YVVDHTIRELDRFA  171 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----LGA-----d--~vId~~~~~~~d~~  171 (655)
                      ..+ ++|++||-.|+  |.|..++-+|+..|  .+|++++.+++-.+.+++    .+.     +  .++. .+     ..
T Consensus        72 ~~l-~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~-gD-----~~  142 (224)
T d1i1na_          72 DQL-HEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV-GD-----GR  142 (224)
T ss_dssp             TTS-CTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE-SC-----GG
T ss_pred             hcc-CCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEE-ee-----cc
Confidence            356 89999999997  66777788888876  489999999877666532    222     1  1121 11     00


Q ss_pred             HHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        172 NQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       172 ~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ... .....+|+|+-+.+-+ .   .+..++.|++||++|..
T Consensus       143 ~~~-~~~~~fD~I~~~~~~~~i---p~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         143 MGY-AEEAPYDAIHVGAAAPVV---PQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GCC-GGGCCEEEEEECSBBSSC---CHHHHHTEEEEEEEEEE
T ss_pred             ccc-chhhhhhhhhhhcchhhc---CHHHHhhcCCCcEEEEE
Confidence            000 0112699998766555 3   46788999999999985

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.40  E-value=0.00099  Score=64.13  Aligned_cols=101  Identities=14%  Similarity=-0.038  Sum_probs=65.4

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ...++ ++|++||=.|+  |.|.++..+++..|++|++++.|++-.+.++    +.|...-++....   |..+.  ...
T Consensus        27 ~~~~l-~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~---d~~~~--~~~   98 (245)
T d1nkva_          27 RVLRM-KPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN---DAAGY--VAN   98 (245)
T ss_dssp             HHTCC-CTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CCTTC--CCS
T ss_pred             HHcCC-CCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh---HHhhc--ccc
Confidence            44567 89999998897  5556778889888999999999988776654    3564321111111   11111  112


Q ss_pred             CCeeEEEeC-----CCcchHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPG-----FTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~-----vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +.+|+|+-.     +... ...++.+.+.|||||++++.
T Consensus        99 ~~fD~v~~~~~~~~~~d~-~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_          99 EKCDVAACVGATWIAGGF-AGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             SCEEEEEEESCGGGTSSS-HHHHHHHTTSEEEEEEEEEE
T ss_pred             CceeEEEEEehhhccCCH-HHHHHHHHHHcCcCcEEEEE
Confidence            379998742     1211 13478888899999998875

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.37  E-value=0.0023  Score=63.14  Aligned_cols=99  Identities=13%  Similarity=0.041  Sum_probs=68.8

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHh----C---CCcEEEeCCccchhHHHHHHH
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYG----L---GADYVVDHTIRELDRFANQIL  175 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~----L---GAd~vId~~~~~~~d~~~~i~  175 (655)
                      .++ ++|++||=.|+  |.|.+++.+|++.|.  +|++++.+++..+.|++    +   ..+.+-....    |..+.  
T Consensus        92 l~i-~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~----d~~~~--  162 (264)
T d1i9ga_          92 GDI-FPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS----DLADS--  162 (264)
T ss_dssp             TTC-CTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS----CGGGC--
T ss_pred             hCC-CCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec----ccccc--
Confidence            566 89999998887  778899999999874  89999999988887753    1   1233211111    11110  


Q ss_pred             hc-CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        176 SY-GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       176 ~~-~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .. .+.+|.|+-.+..+ |+.++.+.++|++||+++.+.
T Consensus       163 ~~~~~~fDaV~ldlp~P-~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         163 ELPDGSVDRAVLDMLAP-WEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             CCCTTCEEEEEEESSCG-GGGHHHHHHHEEEEEEEEEEE
T ss_pred             cccCCCcceEEEecCCH-HHHHHHHHhccCCCCEEEEEe
Confidence            11 23699877656655 234899999999999998864

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.37  E-value=0.0022  Score=61.79  Aligned_cols=94  Identities=13%  Similarity=-0.099  Sum_probs=62.6

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC----CCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL----GADYVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L----GAd~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .++ ++|++||-.|+  |.|..++.+|+. +.+|++++.+++-.+.+++.    .-..++.- +     ......+ .+.
T Consensus        66 L~l-~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~-d-----~~~g~~~-~~p  134 (224)
T d1vbfa_          66 LDL-HKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILG-D-----GTLGYEE-EKP  134 (224)
T ss_dssp             TTC-CTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEES-C-----GGGCCGG-GCC
T ss_pred             hhh-cccceEEEecC--CCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccC-c-----hhhcchh-hhh
Confidence            467 89999999997  456667777775 67999999999888777642    22222221 1     1000011 126


Q ss_pred             eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+|+-+.+.+ .   .+..++.|++|||||..
T Consensus       135 fD~Iiv~~a~~~i---p~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         135 YDRVVVWATAPTL---LCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             EEEEEESSBBSSC---CHHHHHTEEEEEEEEEE
T ss_pred             HHHHHhhcchhhh---hHHHHHhcCCCCEEEEE
Confidence            99988655544 3   46678899999999885

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.36  E-value=0.0094  Score=57.43  Aligned_cols=81  Identities=21%  Similarity=0.167  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHH-------HHHHHhCCCcEEE---eCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVG-------VAKAYGLGADYVV---DHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k-------~~~a~~LGAd~vI---d~~~~~~~d~~~~i~~~  177 (655)
                      +++.+|+|+||+||||...++.....|+ +|+.+.++..+       .+.+++.|+...+   |.++.  ++..+.+.+.
T Consensus         7 ~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~--~~~~~~~~~i   84 (259)
T d2fr1a1           7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDR--ESVRELLGGI   84 (259)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCH--HHHHHHHHTS
T ss_pred             CCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchH--HHHHHhhccc
Confidence            6788999999999999998887777899 47767665322       2334567764332   44432  2343334433


Q ss_pred             C--CCeeEEEeCCCcc
Q psy14589        178 G--SELDADHPGFTDP  191 (655)
Q Consensus       178 ~--~gvDvV~D~vG~~  191 (655)
                      .  .++|.++.+.|..
T Consensus        85 ~~~~~i~~vv~~ag~~  100 (259)
T d2fr1a1          85 GDDVPLSAVFHAAATL  100 (259)
T ss_dssp             CTTSCEEEEEECCCCC
T ss_pred             cccccccccccccccc
Confidence            2  2789999888754

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.34  E-value=0.0011  Score=63.75  Aligned_cols=96  Identities=13%  Similarity=0.078  Sum_probs=58.8

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHH---HcC----CeEEEEecChHHHHHHHh---------CCCcEEE-eCCccch
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGK---AYG----LTVFASVGCPVGVAKAYG---------LGADYVV-DHTIREL  167 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk---~~G----a~Viat~~s~~k~~~a~~---------LGAd~vI-d~~~~~~  167 (655)
                      .++ ++|++||..|+++  |-.++-+|+   ..|    .+|++++..++-.+.+++         .+.+.+. ...+.  
T Consensus        76 ~~l-~~g~~VLeIGtGs--GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~--  150 (223)
T d1r18a_          76 DHL-KPGARILDVGSGS--GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG--  150 (223)
T ss_dssp             TTC-CTTCEEEEESCTT--SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG--
T ss_pred             hcc-CCCCeEEEecCCC--CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccc--
Confidence            467 8999999999744  444444444   444    389999998876666542         1222221 11111  


Q ss_pred             hHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        168 DRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       168 ~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                         .+...+ .+.+|.|+-+.+-+ .   -+..++.|++||++|..
T Consensus       151 ---~~~~~~-~~~fD~Iiv~~a~~~~---p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         151 ---RKGYPP-NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP  189 (223)
T ss_dssp             ---GGCCGG-GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred             ---cccccc-ccceeeEEEEeechhc---hHHHHHhcCCCcEEEEE
Confidence               000011 12699988766655 3   36778899999999874

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.29  E-value=0.01  Score=56.89  Aligned_cols=104  Identities=10%  Similarity=-0.005  Sum_probs=69.2

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHh
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      +...+ ++|++||=.|+  |.|..+..+|+..|  .+|++++.+++..+.+++    .+....+......    ......
T Consensus        67 ~~l~i-~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~----~~~~~~  139 (227)
T d1g8aa_          67 KNFPI-KPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK----PEEYRA  139 (227)
T ss_dssp             CCCCC-CTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC----GGGGTT
T ss_pred             ccccc-CCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCC----cccccc
Confidence            44567 89999998898  56778899999986  489999999988777643    3433333222210    111111


Q ss_pred             cCCCeeEEEeCCCcc--hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPGFTDP--VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ....+|+++-.+...  ....+..+.+.|++||++++..
T Consensus       140 ~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            123789887665443  3344778888999999988753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.29  E-value=0.004  Score=60.27  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=52.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSELDA  183 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDv  183 (655)
                      .|+|+||++|||.+.++.....|++|+.++ +++++.+.+    ++.|....   .|.++.+ .+++.+.+.+..+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            589999999999999988888899998765 455555443    34554322   2444431 12344444544568999


Q ss_pred             EEeCCCcc
Q psy14589        184 DHPGFTDP  191 (655)
Q Consensus       184 V~D~vG~~  191 (655)
                      ++.++|..
T Consensus        83 LVnnAg~~   90 (244)
T d1edoa_          83 VVNNAGIT   90 (244)
T ss_dssp             EEECCCCC
T ss_pred             cccccccc
Confidence            99988753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.26  E-value=0.011  Score=52.72  Aligned_cols=77  Identities=8%  Similarity=-0.038  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCc-cchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTI-RELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~-~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +++|+|.|| |.+|..+++.....|.+|++++++.++.+.+.+-.....+.... .......+.+.    ..|.++.++.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA----KHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT----TSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh----ccceeEeecc
Confidence            678999998 99999999888888999999999999988876533333332222 11111122221    4577777776


Q ss_pred             cch
Q psy14589        190 DPV  192 (655)
Q Consensus       190 ~~~  192 (655)
                      ...
T Consensus        77 ~~~   79 (182)
T d1e5qa1          77 YTF   79 (182)
T ss_dssp             GGG
T ss_pred             chh
Confidence            653

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.24  E-value=0.0043  Score=59.34  Aligned_cols=37  Identities=19%  Similarity=0.187  Sum_probs=32.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG  147 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k  147 (655)
                      +.+|+|+||+||||.+.++.....|++|+.+++++++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~   38 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND   38 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchh
Confidence            3569999999999999999888899999999987653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.22  E-value=0.0047  Score=56.96  Aligned_cols=73  Identities=21%  Similarity=0.038  Sum_probs=48.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .||||+||+|.||..+++.+...|.  +|+++.+++++.+.+. -+...+ .|..+.  +++.+.+    .++|.|+.++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~-~~~~~~~~d~~~~--~~~~~~~----~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG-GEADVFIGDITDA--DSINPAF----QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT-CCTTEEECCTTSH--HHHHHHH----TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc-CCcEEEEeeeccc--ccccccc----ccceeeEEEE
Confidence            5899999999999999988888885  5777888877655433 234433 233322  2233222    2689999887


Q ss_pred             Ccc
Q psy14589        189 TDP  191 (655)
Q Consensus       189 G~~  191 (655)
                      +..
T Consensus        77 ~~~   79 (252)
T d2q46a1          77 SAV   79 (252)
T ss_dssp             CCC
T ss_pred             eec
Confidence            643

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0024  Score=61.55  Aligned_cols=48  Identities=21%  Similarity=0.119  Sum_probs=41.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCc
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGAD  157 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd  157 (655)
                      +|++++|+||++|||.+.++-....|++|+.+++++++++.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            799999999999999999988888999999999998877654 456543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0068  Score=55.33  Aligned_cols=100  Identities=11%  Similarity=-0.038  Sum_probs=71.9

Q ss_pred             HHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589         97 QYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus        97 A~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      ++.++.+..++.=.|++|+|.|- |-||.-.++.+|.+|++|++++..+.+.-.+.--|.. +.        .+.+.+. 
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~-v~--------~~~~a~~-   78 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE-VT--------TMDEACQ-   78 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC--------CHHHHTT-
T ss_pred             HHHHHHHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE-ee--------ehhhhhh-
Confidence            33444433333248999999998 9999999999999999999999988765555555543 22        1222222 


Q ss_pred             cCCCeeEEEeCCCcc--hHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPGFTDP--VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                         ..|+++-++|+.  .   -.+.++.||+|.-|.-+|
T Consensus        79 ---~adivvtaTGn~~vI---~~eh~~~MKdgaIL~N~G  111 (163)
T d1li4a1          79 ---EGNIFVTTTGCIDII---LGRHFEQMKDDAIVCNIG  111 (163)
T ss_dssp             ---TCSEEEECSSCSCSB---CHHHHTTCCTTEEEEECS
T ss_pred             ---hccEEEecCCCccch---hHHHHHhccCCeEEEEec
Confidence               469999999986  2   368889999888777776

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.03  E-value=0.014  Score=56.34  Aligned_cols=80  Identities=15%  Similarity=0.071  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCCchHHHHHH-HHHH--cCCeEEEEecChHHHHHHHh-C----CCcEE----EeCCccc-hhHHHHHHHh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQ-VGKA--YGLTVFASVGCPVGVAKAYG-L----GADYV----VDHTIRE-LDRFANQILS  176 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQ-lAk~--~Ga~Viat~~s~~k~~~a~~-L----GAd~v----Id~~~~~-~~d~~~~i~~  176 (655)
                      .|+.++|+||++|||..+++ +||.  .|++|+.+++++++++.+.+ +    +-..+    .|-++.. .+.+.+.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            78999999999999987764 6663  69999999999988776532 2    11222    2444431 1233444444


Q ss_pred             cC----CCeeEEEeCCC
Q psy14589        177 YG----SELDADHPGFT  189 (655)
Q Consensus       177 ~~----~gvDvV~D~vG  189 (655)
                      ..    ..+|+++.+.|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            32    26788888765

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.03  E-value=0.02  Score=51.53  Aligned_cols=86  Identities=15%  Similarity=-0.012  Sum_probs=59.6

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe-------CCccchhHHHHHHHhcCCCeeEE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD-------HTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId-------~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      +++.|.|+ |.+|+..+..+...|..|.+.++++++.+.+++.|......       .......+..+.+.    +.|++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~----~aD~i   76 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK----DADVI   76 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT----TCSEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc----CCCEE
Confidence            58999999 99999999999889999999999999998887655322210       00000012333333    58999


Q ss_pred             EeCCCcchHHHHHHHHHHhcc
Q psy14589        185 HPGFTDPVYRARRKYFADLAF  205 (655)
Q Consensus       185 ~D~vG~~~~~~l~~~l~~l~~  205 (655)
                      +-++....   .+..++.+++
T Consensus        77 ii~v~~~~---~~~~~~~i~~   94 (184)
T d1bg6a2          77 LIVVPAIH---HASIAANIAS   94 (184)
T ss_dssp             EECSCGGG---HHHHHHHHGG
T ss_pred             EEEEchhH---HHHHHHHhhh
Confidence            99998886   4555554443

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.00  E-value=0.011  Score=57.72  Aligned_cols=104  Identities=13%  Similarity=-0.035  Sum_probs=69.1

Q ss_pred             HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHH
Q psy14589        100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFAN  172 (655)
Q Consensus       100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~  172 (655)
                      .+.....+ ++|++||=.|+  |.|..+..+|+..|++|++++.++..++.+++    .|.+   .++...-.   ++  
T Consensus        58 ~l~~~~~l-~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~---~l--  129 (282)
T d2o57a1          58 ELAMTGVL-QRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL---EI--  129 (282)
T ss_dssp             HHHHTTCC-CTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT---SC--
T ss_pred             HHHHhcCC-CCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccc---cc--
Confidence            34556777 89999998898  56778888998889999999999987766643    3432   22221110   11  


Q ss_pred             HHHhcCCCeeEEEeCCCc----chHHHHHHHHHHhccccceEEEe
Q psy14589        173 QILSYGSELDADHPGFTD----PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       173 ~i~~~~~gvDvV~D~vG~----~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                        .-..+.+|+|+-.-.-    +..+.+..+.++|+|||++++..
T Consensus       130 --~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         130 --PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             --SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --cccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence              0011369998743211    12245789999999999988764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=95.98  E-value=0.0071  Score=55.09  Aligned_cols=43  Identities=12%  Similarity=0.026  Sum_probs=37.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY  152 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~  152 (655)
                      .+|++|+|.|+ ||.+.+++..+..+|++|..+.|+.+|.+.+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~   58 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELA   58 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHH
Confidence            58999999999 99999999888889999999999988876653

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.96  E-value=0.0087  Score=54.45  Aligned_cols=46  Identities=11%  Similarity=-0.020  Sum_probs=38.9

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY  152 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~  152 (655)
                      -.+ .++++|+|.|+ ||.+.+++..++..|+ +|..+.|+.+|.+.+.
T Consensus        12 ~~~-~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~   58 (167)
T d1npya1          12 YHL-NKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLA   58 (167)
T ss_dssp             TTC-CTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHH
T ss_pred             cCC-CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHH
Confidence            344 47889999999 9999999999999998 7888999998877664

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0031  Score=60.00  Aligned_cols=102  Identities=9%  Similarity=0.011  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEE------------EeCCccc----hhHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYV------------VDHTIRE----LDRFA  171 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~v------------Id~~~~~----~~d~~  171 (655)
                      ++|.+||..|+  |.|..+..+|+ .|++|++++.|++-++.+++ .+....            .......    ..|+.
T Consensus        44 ~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            58889999999  56888888887 69999999999998887764 222111            1000000    00111


Q ss_pred             HHHHhcCCCeeEEEeCCCc-----c-hHHHHHHHHHHhccccceEEEe
Q psy14589        172 NQILSYGSELDADHPGFTD-----P-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       172 ~~i~~~~~gvDvV~D~vG~-----~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +......+.+|+|+++.--     + .-..+....++|+|||+++++.
T Consensus       121 ~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         121 DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            1111122368999986421     1 1122578888999999988775

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.87  E-value=0.0097  Score=57.12  Aligned_cols=79  Identities=13%  Similarity=0.047  Sum_probs=49.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HH-H---H-hCCCcEEEeC---Cc-cchh----HHHHHHHhcC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AK-A---Y-GLGADYVVDH---TI-RELD----RFANQILSYG  178 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~-a---~-~LGAd~vId~---~~-~~~~----d~~~~i~~~~  178 (655)
                      +.||+||++|||.+.++.....|++|+.++++.++. +. +   . ..+.......   .. ...+    ++.+.+.+..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            468999999999999998888999999999886543 22 2   2 2344433221   11 1001    1222333333


Q ss_pred             CCeeEEEeCCCcc
Q psy14589        179 SELDADHPGFTDP  191 (655)
Q Consensus       179 ~gvDvV~D~vG~~  191 (655)
                      +++|+++.++|..
T Consensus        83 g~iDilvnnAG~~   95 (266)
T d1mxha_          83 GRCDVLVNNASAY   95 (266)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCccC
Confidence            4799999998853

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0051  Score=58.64  Aligned_cols=96  Identities=9%  Similarity=-0.043  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC----CCcEEEeCCccchhHHHHHHHhcC-CCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL----GADYVVDHTIRELDRFANQILSYG-SELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L----GAd~vId~~~~~~~d~~~~i~~~~-~gvDv  183 (655)
                      ++|++||-.|+  |.|..+..+++..+++|++++.+++-++.+++.    +....+-..     +......... +.+|.
T Consensus        52 ~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~fD~  124 (229)
T d1zx0a1          52 SKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-----LWEDVAPTLPDGHFDG  124 (229)
T ss_dssp             TTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-----CHHHHGGGSCTTCEEE
T ss_pred             cCCCeEEEeec--cchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-----cccccccccccccccc
Confidence            47899999997  667788889987777999999999888887643    222111111     2222222332 37888


Q ss_pred             E-EeCCCcc-h-------HHHHHHHHHHhccccceEE
Q psy14589        184 D-HPGFTDP-V-------YRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       184 V-~D~vG~~-~-------~~~l~~~l~~l~~gGrlv~  211 (655)
                      | +|++... .       ...+..+.+.|+|||+++.
T Consensus       125 i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~  161 (229)
T d1zx0a1         125 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY  161 (229)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred             eeecccccccccccccCHHHHHHHHHHHcCCCcEEEE
Confidence            7 4665443 1       1234567789999998764

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.82  E-value=0.00045  Score=63.89  Aligned_cols=86  Identities=7%  Similarity=-0.036  Sum_probs=57.7

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+......|..|..|..++|.+..+...  ...      ......|.+++...   ++++++++++|++++++.|||+++
T Consensus        88 ~~~~~~~~c~~c~~g~~~~c~~~~~~~~--~~~------~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~  159 (178)
T d1e3ja1          88 EPGVPCRRCQFCKEGKYNLCPDLTFCAT--PPD------DGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF  159 (178)
T ss_dssp             CCEECCSSSHHHHTTCGGGCTTCEETTB--TTB------CCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH
T ss_pred             CcccccCCccccccCCccccccccceec--ccc------ccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH
Confidence            4556778899999998777655443110  000      01112233444322   456788999999999999999998


Q ss_pred             hcCCCCCCCCCEEEEEcCC
Q psy14589        102 PSKPLYTPEPDTLFIIGAN  120 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~Gas  120 (655)
                      . .+++ ++|++|+|.||.
T Consensus       160 ~-~~~~-~~g~~VlVig~C  176 (178)
T d1e3ja1         160 E-AARK-KADNTIKVMISC  176 (178)
T ss_dssp             H-HHHH-CCTTCSEEEEEC
T ss_pred             H-HhCC-CCCCEEEEEccc
Confidence            5 5677 899999999874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.79  E-value=0.02  Score=54.93  Aligned_cols=82  Identities=15%  Similarity=0.126  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChHHH-HHH-HhCCCcE---EEeCCccc-hhHHHHHHHhc---C
Q psy14589        110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPVGV-AKA-YGLGADY---VVDHTIRE-LDRFANQILSY---G  178 (655)
Q Consensus       110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~k~-~~a-~~LGAd~---vId~~~~~-~~d~~~~i~~~---~  178 (655)
                      +|++++|+||+  .|||.+.++-....||+|+.+.++.++. +.+ +++|...   ..|..+.. .+++.+.+.+.   .
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence            79999999964  4799998888888899999999887765 333 3455322   23443321 12344444433   2


Q ss_pred             CCeeEEEeCCCcc
Q psy14589        179 SELDADHPGFTDP  191 (655)
Q Consensus       179 ~gvDvV~D~vG~~  191 (655)
                      +.+|+++.++|..
T Consensus        85 ~~ld~~i~~ag~~   97 (268)
T d2h7ma1          85 NKLDGVVHSIGFM   97 (268)
T ss_dssp             CCEEEEEECCCCC
T ss_pred             CCcceeeeccccc
Confidence            3789999888743

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.66  E-value=0.0011  Score=62.49  Aligned_cols=92  Identities=9%  Similarity=-0.112  Sum_probs=60.8

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCC---CCCCCccccccc------ccccCCcE---EeecC---CCCCCCCHHhHhh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAE---DNIPQLEDISKF------LKDSTGFS---LRPVA---GLLSSRDFLAGLA   89 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~---~~iP~le~V~~~------l~~~~g~~---~~~v~---~l~~~~s~~eAAa   89 (655)
                      .+......|..|+.|..++|.+.....   ...++.......      ....+||+   +++..   .++++++++++|+
T Consensus        93 ~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~~~~~aa~  172 (199)
T d1cdoa1          93 LFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFIT  172 (199)
T ss_dssp             CSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTSCCGGGEE
T ss_pred             eeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCCCHHHHHH
Confidence            466677899999999888886654321   111111111000      01124444   44433   3567888999999


Q ss_pred             hhhHHHHHHHHhhcCCCCCCCCCEEEEE
Q psy14589         90 FRVFHSTQYIRHPSKPLYTPEPDTLFII  117 (655)
Q Consensus        90 l~~a~~TA~~aL~~~~~l~~~Gd~VLI~  117 (655)
                      +.+++.|+++++...+.. +.|++|||.
T Consensus       173 l~~~l~t~~~av~~~~~~-~~G~tVlv~  199 (199)
T d1cdoa1         173 HRMPLESVNDAIDLMKHG-KCIRTVLSL  199 (199)
T ss_dssp             EEEEGGGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCC-CCCCEEEeC
Confidence            999999999999887777 789999984

>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: AF1403 N-terminal domain-like
domain: Hypothetical protein AF1403, N-terminal domain
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.66  E-value=0.01  Score=47.33  Aligned_cols=66  Identities=12%  Similarity=0.171  Sum_probs=48.4

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCC
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCS  329 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~  329 (655)
                      .+.+...+ ++|-|+++...+++.++|+..+.++...+...+..+-++++. +..+.+++++|++.-.
T Consensus         3 ~i~i~~~D-r~GlL~di~~~ia~~~~NI~~i~~~~~~~g~~~~~~~i~v~~~~~~l~~ll~kL~~l~~   69 (77)
T d1y7pa2           3 GLRIIAEN-KIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKTFDY   69 (77)
T ss_dssp             EEEEEEEC-CTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHTCTT
T ss_pred             eEEEEEec-CCChHHHHHHHHHHcCCCeEEEEeeccCCCeEEEEEEEEEEcCcccHHHHHHHHHcCCC
Confidence            34555666 999999999999999999999998866666666667777765 4369999999997644

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.57  E-value=0.039  Score=51.86  Aligned_cols=103  Identities=7%  Similarity=-0.047  Sum_probs=65.7

Q ss_pred             CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589        104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~  178 (655)
                      ...+ ++|++||=.|+  |.|..+..+|+..+ .+|++++.+++..+.++    +.+-...+.....   +. .......
T Consensus        51 ~l~l-kpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~---~~-~~~~~~~  123 (209)
T d1nt2a_          51 RLKL-RGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS---KP-WKYSGIV  123 (209)
T ss_dssp             CCCC-CSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT---CG-GGTTTTC
T ss_pred             cCCC-CCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc---Cc-ccccccc
Confidence            3567 89999998898  44557778888875 48999999998776663    3453333322211   00 0111112


Q ss_pred             CCeeEEEeCCCcc--hHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTDP--VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+|+++..+...  ....+..+.+.|++||++++..
T Consensus       124 ~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         124 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            2688887655333  2234677888999999998763

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.50  E-value=0.0078  Score=58.95  Aligned_cols=38  Identities=24%  Similarity=0.284  Sum_probs=33.3

Q ss_pred             CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHH
Q psy14589        110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVG  147 (655)
Q Consensus       110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k  147 (655)
                      +|+++||+||+|  |||.+.++.....||+|+.+.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            799999999976  99999999888899999998876543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.49  E-value=0.008  Score=56.35  Aligned_cols=100  Identities=11%  Similarity=-0.038  Sum_probs=65.3

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE--EeCCccchhHHHHHHHh
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV--VDHTIRELDRFANQILS  176 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v--Id~~~~~~~d~~~~i~~  176 (655)
                      +..++ +++++||=.|+  |.|..+..+++. |++|++++.+++-++.++    +.|.+.+  +.....   +    +.-
T Consensus         9 ~~~~l-~~~~rVLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~---~----l~~   77 (231)
T d1vl5a_           9 QIAAL-KGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE---Q----MPF   77 (231)
T ss_dssp             HHHTC-CSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----C----CCS
T ss_pred             HhcCC-CCcCEEEEecc--cCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccccccccccc---c----ccc
Confidence            44567 89999999998  366677777754 889999999987666654    4565432  221111   1    100


Q ss_pred             cCCCeeEEEeCCCc----chHHHHHHHHHHhccccceEEEe
Q psy14589        177 YGSELDADHPGFTD----PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       177 ~~~gvDvV~D~vG~----~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+.+|+|+-.-.-    +....+..+.++|+|||++++.-
T Consensus        78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            12369999754321    12244889999999999999863

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.48  E-value=0.047  Score=52.15  Aligned_cols=104  Identities=10%  Similarity=-0.042  Sum_probs=66.9

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~  177 (655)
                      +...+ ++|++||=.||  |.|..+..+|+.. +.+|++++.+++..+.+++    .+-...+.......+    .....
T Consensus        68 ~~l~i-kpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~----~~~~~  140 (230)
T d1g8sa_          68 KVMPI-KRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ----EYANI  140 (230)
T ss_dssp             CCCCC-CTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG----GGTTT
T ss_pred             HhCCC-CCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc----ccccc
Confidence            44566 89999999998  5566888888875 3599999999987777654    233333332221101    11112


Q ss_pred             CCCeeEEEeCCCcc--hHHHHHHHHHHhccccceEEEe
Q psy14589        178 GSELDADHPGFTDP--VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       178 ~~gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ...+|+++..+...  ....+..+.+.|++||+++++.
T Consensus       141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            23677777766544  2233677788999999988753

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.47  E-value=0.0062  Score=57.79  Aligned_cols=102  Identities=16%  Similarity=0.142  Sum_probs=65.3

Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHh
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~  176 (655)
                      +....++ ++|++||=.|+  |.|..+..+++ .|++|++++.|++-++.|+    ..|.+.+ +....   +..+ + .
T Consensus         8 l~~~~~~-~~~~rILDiGc--GtG~~~~~la~-~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~-~~~~~---d~~~-~-~   77 (234)
T d1xxla_           8 MIKTAEC-RAEHRVLDIGA--GAGHTALAFSP-YVQECIGVDATKEMVEVASSFAQEKGVENV-RFQQG---TAES-L-P   77 (234)
T ss_dssp             HHHHHTC-CTTCEEEEESC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHHTCCSE-EEEEC---BTTB-C-C
T ss_pred             HHHHhCC-CCCCEEEEeCC--cCcHHHHHHHH-hCCeEEEEeCChhhhhhhhhhhcccccccc-ccccc---cccc-c-c
Confidence            3345677 99999998898  56667777777 4789999999987666653    3344322 11111   1100 0 1


Q ss_pred             c-CCCeeEEEeCCCc----chHHHHHHHHHHhccccceEEE
Q psy14589        177 Y-GSELDADHPGFTD----PVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       177 ~-~~gvDvV~D~vG~----~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      . .+.+|+|+-.-.-    +....++.+.+.|+|||++++.
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence            1 1369998853322    1224588899999999998875

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.44  E-value=0.002  Score=59.05  Aligned_cols=80  Identities=11%  Similarity=-0.041  Sum_probs=54.2

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+....+.|..|+.|..++|.+..+......+         ....|.+++...   ++++++++.++++.+++.|||+++
T Consensus        88 ~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G---------~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al  158 (171)
T d1h2ba1          88 HPAVTDGTCLACRAGEDMHCENLEFPGLNIDG---------GFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL  158 (171)
T ss_dssp             CSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCC---------SSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH
T ss_pred             cCccCCCCcccccccccccccccccceeeccc---------ccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH
Confidence            35566789999999998888776652111111         111222333322   446778877889999999999998


Q ss_pred             hcCCCCCCCCCEEEE
Q psy14589        102 PSKPLYTPEPDTLFI  116 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI  116 (655)
                      . .+++  .|++|||
T Consensus       159 ~-~~~~--~G~~VlI  170 (171)
T d1h2ba1         159 E-KGEV--LGRAVLI  170 (171)
T ss_dssp             H-TTCC--SSEEEEE
T ss_pred             H-hcCC--CCCEEEe
Confidence            5 5676  7999998

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.43  E-value=0.0015  Score=61.41  Aligned_cols=31  Identities=19%  Similarity=0.073  Sum_probs=24.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFA  140 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Via  140 (655)
                      +.++.++|.|+ |++|++++|+||.+|++.+.
T Consensus       161 ~~~~~~~i~g~-g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         161 PFDQLVKFYAF-DEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             CGGGGEEEEEG-GGHHHHHHHHHHTSCSEEEE
T ss_pred             CcccEEEEeCc-HHHHHHHHHHHHHcCCCEEE
Confidence            44566666666 99999999999999995443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.42  E-value=0.031  Score=48.09  Aligned_cols=73  Identities=15%  Similarity=0.104  Sum_probs=54.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~  191 (655)
                      +++|.|+ |-+|..+++..+..|.+|++++.++++.+.+++.|...++-....  .+.   +.+.+ ..+|.++-+++..
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~--~~~---l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATE--ENE---LLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTC--TTH---HHHHTGGGCSEEEECCCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeeccc--chh---hhccCCccccEEEEEcCch
Confidence            5788898 999999999999999999999999999999998887655422211  122   22222 2578888888776

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.40  E-value=0.028  Score=51.54  Aligned_cols=74  Identities=22%  Similarity=0.137  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH----h----CC-CcEEEeCCccchhHHHHHHHhcCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY----G----LG-ADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~----~----LG-Ad~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      +|.+|+|.|+ ||.|.+++..+...|+ +++.+.|++++.+.+.    +    .. ...+.+..+.  +++.+.+.    
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----   89 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ--QAFAEALA----   89 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH--HHHHHHHH----
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc--cchhhhhc----
Confidence            7899999999 9999998888888898 6777888766554432    2    22 1223444332  13333333    


Q ss_pred             CeeEEEeCCCc
Q psy14589        180 ELDADHPGFTD  190 (655)
Q Consensus       180 gvDvV~D~vG~  190 (655)
                      .+|+|++|+.-
T Consensus        90 ~~diiIN~Tp~  100 (182)
T d1vi2a1          90 SADILTNGTKV  100 (182)
T ss_dssp             TCSEEEECSST
T ss_pred             ccceeccccCC
Confidence            57999999863

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.38  E-value=0.012  Score=58.86  Aligned_cols=47  Identities=17%  Similarity=0.160  Sum_probs=39.9

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY  152 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~  152 (655)
                      ..+ ++|++|||+||+|=||..+++-....|.+|++++++.++.+.++
T Consensus         6 ~~~-~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVL-PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSS-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCC-CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            344 89999999999999999999877778999999999887766553

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.29  E-value=0.02  Score=52.87  Aligned_cols=95  Identities=13%  Similarity=0.041  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc-EEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD-YVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd-~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      +++++||=.|+  |.|..+..+|+ .|++|++++.|++-++.+++    .+.. ..+.....   +    +....+.+|+
T Consensus        36 ~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~---~----l~~~~~~fD~  105 (226)
T d1ve3a1          36 KKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR---K----LSFEDKTFDY  105 (226)
T ss_dssp             CSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT---S----CCSCTTCEEE
T ss_pred             CCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc---c----ccccCcCceE
Confidence            67889999998  55778888887 58999999999987777653    3422 22221110   1    1111236899


Q ss_pred             EEeCCCcc------hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTDP------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~~------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+-.-.-.      ....++.+.+.|+|||++++..
T Consensus       106 I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~~  141 (226)
T d1ve3a1         106 VIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF  141 (226)
T ss_dssp             EEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEEE
Confidence            87433211      1134778888999999988653

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.28  E-value=0.035  Score=49.53  Aligned_cols=67  Identities=9%  Similarity=-0.099  Sum_probs=50.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC-cEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA-DYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA-d~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|.|.|+ |.+|...++..+..|.+|++.++++++.+.+++.|. +...+..+        .+    ...|+|+-++...
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~--------~~----~~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLS--------LL----QTAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGG--------GG----TTCSEEEECSCHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecc--------cc----cccccccccCcHh
Confidence            6889999 999998887778889999999999999999999885 44432111        11    2578888888655


Q ss_pred             h
Q psy14589        192 V  192 (655)
Q Consensus       192 ~  192 (655)
                      .
T Consensus        69 ~   69 (165)
T d2f1ka2          69 L   69 (165)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.28  E-value=2.6e-05  Score=74.48  Aligned_cols=103  Identities=12%  Similarity=0.008  Sum_probs=63.5

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---EeecC-----CCCCCCCHHhHhhhhhHHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPVA-----GLLSSRDFLAGLAFRVFHST   96 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v~-----~l~~~~s~~eAAal~~a~~T   96 (655)
                      .+.+..+.|..|..|+.+.|...+....  .+............+|+   ++|..     .++++.+..+++++.++..|
T Consensus        91 ~~~~~Cg~C~~C~~g~~~~~~~~~~~~~--~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~~~~  168 (201)
T d1kola1          91 PFNVACGRCRSCKEMHTGVCLTVNPARA--GGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGV  168 (201)
T ss_dssp             CSEECCSSSHHHHTTCGGGCSSSCSSSS--CEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHHHTE
T ss_pred             eeeeeccCChhhhCCCcccccccccccc--cccccccCCCccccccccEEEeehHHCeEEECCCCCChHHHHHHHHHHHH
Confidence            5677889999999998766655443211  11100000001112333   34321     13344567778889999999


Q ss_pred             HHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC
Q psy14589         97 QYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL  136 (655)
Q Consensus        97 A~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga  136 (655)
                      +++++.. ... +.|+    .|+ |++|++++|+||++||
T Consensus       169 ~~~a~~~-~~~-~~g~----~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         169 QVISLDD-APR-GYGE----FDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EEECGGG-HHH-HHHH----HHH-TCSCEEEECTTCSSCC
T ss_pred             HHHHHHh-CCC-CCeE----Eee-CHHHHHHHHHHHHcCC
Confidence            9888753 333 3444    477 9999999999999997

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.27  E-value=0.011  Score=57.42  Aligned_cols=32  Identities=19%  Similarity=0.137  Sum_probs=27.5

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      ++|+||++|||.+.++.....|++|+.++++.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~   36 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   36 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            68999999999999988888899998876643

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.17  E-value=0.024  Score=58.97  Aligned_cols=104  Identities=12%  Similarity=0.034  Sum_probs=66.5

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh---------------CCCcEEEeCCccc
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG---------------LGADYVVDHTIRE  166 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~---------------LGAd~vId~~~~~  166 (655)
                      +..++ ++|++|+=.|+  |+|.+++++|+..|+ +|++++.++...+.|++               .|...........
T Consensus       210 ~~l~L-kpgd~fLDLGC--G~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         210 QQCQL-KKGDTFMDLGS--GVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHTTC-CTTCEEEEESC--TTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHhCC-CCCCEEEeCCC--CCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            44567 89999987786  899999999999987 89999999877766642               2222322122110


Q ss_pred             hhHHHHHHHhcCCCeeEEEeCC---CcchHHHHHHHHHHhccccceEEE
Q psy14589        167 LDRFANQILSYGSELDADHPGF---TDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       167 ~~d~~~~i~~~~~gvDvV~D~v---G~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..+......   ..+|+|+-..   +.+....+...++.||+||++|+.
T Consensus       287 ~~~~~d~~~---~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~  332 (406)
T d1u2za_         287 DNNRVAELI---PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL  332 (406)
T ss_dssp             TCHHHHHHG---GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             hcccccccc---ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEe
Confidence            001222211   1467776421   222334477888899999999874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.15  E-value=0.023  Score=51.59  Aligned_cols=88  Identities=15%  Similarity=0.006  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      =.|++|+|.|= |-+|.-.++-+|.+|++|+++..+|-+.-.|.--|- +|.        ...+.+.    ..|+++-++
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf-~v~--------~~~~a~~----~aDi~vTaT   86 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVV--------TLDEIVD----KGDFFITCT   86 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EEC--------CHHHHTT----TCSEEEECC
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCC-ccC--------chhHccc----cCcEEEEcC
Confidence            48999999998 999999999999999999999998866544444453 232        1222222    469999999


Q ss_pred             Ccc--hHHHHHHHHHHhccccceEEEe
Q psy14589        189 TDP--VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       189 G~~--~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+.  .   -...++.||.|..|--+|
T Consensus        87 Gn~~vI---~~~h~~~MKdgaIl~N~G  110 (163)
T d1v8ba1          87 GNVDVI---KLEHLLKMKNNAVVGNIG  110 (163)
T ss_dssp             SSSSSB---CHHHHTTCCTTCEEEECS
T ss_pred             CCCccc---cHHHHHHhhCCeEEEecc
Confidence            997  2   367789999988877776

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.09  E-value=0.038  Score=46.49  Aligned_cols=89  Identities=9%  Similarity=-0.061  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|.+|+|.|+ |.+|..-++.....||+|++++....  -.+.+ +-+-...+...-.. .++        .++++|+-+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~dl--------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWA-NEGMLTLVEGPFDE-TLL--------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH-TTTSCEEEESSCCG-GGG--------TTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH-hcCCceeeccCCCH-HHh--------CCCcEEeec
Confidence            7899999999 99999999999999998877665432  22223 33333344322110 111        168999999


Q ss_pred             CCcchHHHH-HHHHHHhccccceEEE
Q psy14589        188 FTDPVYRAR-RKYFADLAFNYKHFFF  212 (655)
Q Consensus       188 vG~~~~~~l-~~~l~~l~~gGrlv~v  212 (655)
                      ++.+.   + .+..+..++.|.+|=+
T Consensus        80 t~d~~---~n~~i~~~a~~~~ilVNv  102 (113)
T d1pjqa1          80 TDDDT---VNQRVSDAAESRRIFCNV  102 (113)
T ss_dssp             CSCHH---HHHHHHHHHHHTTCEEEE
T ss_pred             CCCHH---HHHHHHHHHHHcCCEEEe
Confidence            88775   4 3555677778887755

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.06  E-value=0.03  Score=52.59  Aligned_cols=69  Identities=17%  Similarity=0.129  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|+|.|. |.||..+++.+...|++|++.+.+.++.+.+..+|++.+ +..     ++      +...+|+.+-|..
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~~~-----~~------~~~~~DI~iPcA~   92 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALE-----DV------LSTPCDVFAPCAM   92 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGG-----GG------GGCCCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-Ccc-----cc------ccccceeeecccc
Confidence            8999999998 999999999999999999999999999988888987643 211     11      1226788887765


Q ss_pred             cc
Q psy14589        190 DP  191 (655)
Q Consensus       190 ~~  191 (655)
                      +.
T Consensus        93 ~~   94 (201)
T d1c1da1          93 GG   94 (201)
T ss_dssp             SC
T ss_pred             cc
Confidence            55

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.04  E-value=0.063  Score=46.19  Aligned_cols=74  Identities=14%  Similarity=-0.009  Sum_probs=54.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~  190 (655)
                      +|+|.|+ |.+|..+++.....|..|++++.++++.+.+++ +|.. ++.-...    -.+.+.+.+ ...|.++-+++.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~----~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCT----KIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTT----SHHHHHHTTTTTCSEEEECCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCccc----chhhhhhcChhhhhhhcccCCc
Confidence            6999999 999999999999999999999999999988764 6654 4432211    112333333 378999988887


Q ss_pred             ch
Q psy14589        191 PV  192 (655)
Q Consensus       191 ~~  192 (655)
                      +.
T Consensus        76 d~   77 (132)
T d1lssa_          76 EE   77 (132)
T ss_dssp             HH
T ss_pred             HH
Confidence            73

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.01  E-value=0.051  Score=54.31  Aligned_cols=38  Identities=21%  Similarity=0.241  Sum_probs=30.5

Q ss_pred             CCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChHHH
Q psy14589        111 PDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCPVGV  148 (655)
Q Consensus       111 Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~~k~  148 (655)
                      ++..||+|+  +.|||.++++.....||+|+.+.+++...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            567899995  46999999888888899999887765433

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.90  E-value=0.01  Score=48.52  Aligned_cols=83  Identities=14%  Similarity=0.022  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      .|++|+|.|. |..|+.+++++...|++|++.+.++.  ..+.+++ +....+.....   +   .+.    ++|.|+-+
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~~---~---~~~----~~d~vi~S   71 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-AVERHTGSLND---E---WLM----AADLIVAS   71 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-TSCEEESBCCH---H---HHH----HCSEEEEC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-ccceeecccch---h---hhc----cCCEEEEC
Confidence            6889999999 99999999999999999999998553  2222222 33333332211   1   122    47999988


Q ss_pred             CCcchHHHHHHHHHHhcccc
Q psy14589        188 FTDPVYRARRKYFADLAFNY  207 (655)
Q Consensus       188 vG~~~~~~l~~~l~~l~~gG  207 (655)
                      .|-+.   -...++.++..|
T Consensus        72 PGi~~---~~~~~~~a~~~g   88 (93)
T d2jfga1          72 PGIAL---AHPSLSAAADAG   88 (93)
T ss_dssp             TTSCT---TSHHHHHHHHTT
T ss_pred             CCCCC---CCHHHHHHHHcC
Confidence            88773   234444444444

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.063  Score=53.80  Aligned_cols=102  Identities=12%  Similarity=0.068  Sum_probs=66.3

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh---------------CCCcEEEeCCccc
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG---------------LGADYVVDHTIRE  166 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~---------------LGAd~vId~~~~~  166 (655)
                      +..++ +++++|+=.|+  |.|.+++++|+..|+ +|++++.+++..+.+++               .+.-.++...-.+
T Consensus       145 ~~~~l-~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         145 DEIKM-TDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHSCC-CTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHcCC-CCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            44567 89999998886  889999999999988 79999999977666532               1222333322111


Q ss_pred             hhHHHHHHHhcCCCeeEEEeCC---CcchHHHHHHHHHHhccccceEEE
Q psy14589        167 LDRFANQILSYGSELDADHPGF---TDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       167 ~~d~~~~i~~~~~gvDvV~D~v---G~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                       .++.+...    .+|+|+-..   +.+....+...++.|++||++|..
T Consensus       222 -~~~~~~~~----~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~  265 (328)
T d1nw3a_         222 -EEWRERIA----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS  265 (328)
T ss_dssp             -HHHHHHHH----HCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             -cccccccC----cceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEe
Confidence             12333333    357776321   122224467788889999999874

>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: IlvH-like
domain: Acetolactate synthase small subunit, IlvH
species: Escherichia coli [TaxId: 562]

Probab=94.80  E-value=0.055  Score=42.88  Aligned_cols=70  Identities=13%  Similarity=0.219  Sum_probs=56.1

Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEE
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINI  333 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~i  333 (655)
                      .++...+.| +||-|+++..+|+.+++|+..+..-|+.. ++-..+-+-++| +..+.++++.|++.-+-+++
T Consensus         2 htlsv~v~N-~~GVL~RisglF~rRg~NI~Sl~v~~te~-~~iSR~tivv~~~~~~i~qi~kQL~KlidV~~V   72 (76)
T d2f1fa1           2 RILSVLLEN-ESGALSRVIGLFSQRGYNIESLTVAPTDD-PTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRV   72 (76)
T ss_dssp             EEEEEEEEC-CTTHHHHHHHHHHTTTCCCSEEEEEECSC-SSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEE
T ss_pred             EEEEEEEEC-CCcHHHHHHHHHHhcCcceEEEEEcccCC-CCeeEEEEEEECCHHHHHHHHHHHhCCCCEEEE
Confidence            455556677 89999999999999999999999988875 445567777888 67788899999988665443

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.76  E-value=0.052  Score=54.32  Aligned_cols=98  Identities=11%  Similarity=-0.089  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE--EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV--VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      +|++||=.++  |.|..++++|+ .+++|++++.+++.++.++    ..|.+.+  +....   .++.+...+....+|+
T Consensus       145 ~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~---~~~~~~~~~~~~~fD~  218 (318)
T d1wxxa2         145 RGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANA---FDLLRRLEKEGERFDL  218 (318)
T ss_dssp             CEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCH---HHHHHHHHHTTCCEEE
T ss_pred             CCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccH---HHHhhhhHhhhcCCCE
Confidence            6899995554  33445556664 3569999999998887775    3666532  32221   1444555555558999


Q ss_pred             EEeCCC-----cc-h-------HHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFT-----DP-V-------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG-----~~-~-------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+--..     .. .       .+.+..++++|+|||.++...
T Consensus       219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~s  261 (318)
T d1wxxa2         219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS  261 (318)
T ss_dssp             EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            873221     11 1       134567888999999988764

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.67  E-value=0.039  Score=55.32  Aligned_cols=102  Identities=12%  Similarity=-0.031  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++|++||=.++  |+|..++.+|+. || +|++++.+++.++.++    ..|.+.-+.....+..++...+.+.+..+|+
T Consensus       144 ~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~  220 (324)
T d2as0a2         144 QPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI  220 (324)
T ss_dssp             CTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             CCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence            68999985554  455555565654 77 8999999998887774    3565321111111111333344444558999


Q ss_pred             EEeCCCcc-------------hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTDP-------------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~~-------------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+-.....             ..+.+..++++|++||+++...
T Consensus       221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s  263 (324)
T d2as0a2         221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS  263 (324)
T ss_dssp             EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            87422211             1134677888999999988864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.60  E-value=0.064  Score=52.20  Aligned_cols=74  Identities=16%  Similarity=0.078  Sum_probs=48.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEec-----ChHHHHHHHhCCCcEEE--eCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVG-----CPVGVAKAYGLGADYVV--DHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-----s~~k~~~a~~LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      +|||+||+|=||+.+++.+...|.+|+++++     +.++...+...+--.++  |-.+.  +++.+.+...  ++|+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~--~~l~~~~~~~--~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK--NDVTRLITKY--MPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH--HHHHHHHHHH--CCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH--HHHHHHHHhc--CCceEE
Confidence            6999999999999999888888999999863     11233344444433444  22221  2444444433  479999


Q ss_pred             eCCCc
Q psy14589        186 PGFTD  190 (655)
Q Consensus       186 D~vG~  190 (655)
                      .+++.
T Consensus        78 h~aa~   82 (338)
T d1orra_          78 HLAGQ   82 (338)
T ss_dssp             ECCCC
T ss_pred             eeccc
Confidence            98764

>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: IlvH-like
domain: Acetolactate synthase small subunit, IlvH
species: Thermotoga maritima [TaxId: 2336]

Probab=94.46  E-value=0.083  Score=41.99  Aligned_cols=71  Identities=13%  Similarity=0.185  Sum_probs=56.7

Q ss_pred             eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEE
Q psy14589        261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINI  333 (655)
Q Consensus       261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~i  333 (655)
                      +.++...+.| +||-|.++..+|+.+|+|+..+..-|+... +-.++-+-++| +..+.++++.|++.-+-+++
T Consensus         3 ~~tisvlv~n-~pGvL~Ri~~lF~rRg~NI~SL~v~~te~~-~iSR~tivv~g~~~~i~qi~kQl~KlidV~~V   74 (78)
T d2fgca2           3 EHLVSMLVHN-KPGVMRKVANLFARRGFNISSITVGESETP-GLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKV   74 (78)
T ss_dssp             EEEEEEEEEC-CTTHHHHHHHHHHTTTCEEEEEEEEECSST-TEEEEEEEEEECTTHHHHHHHHHTTSTTEEEE
T ss_pred             eEEEEEEEeC-CCcHHHHHHHHHhhCCcceEEEEEeecCCC-CeEEEEEEEEcCHHHHHHHHHHHhCCcCEEEE
Confidence            3455555667 899999999999999999999998887654 45667777777 77889999999988665544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.31  E-value=0.94  Score=39.11  Aligned_cols=82  Identities=15%  Similarity=-0.026  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcCCCeeEEEeCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYGSELDADHPGF  188 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~~gvDvV~D~v  188 (655)
                      .-++|.|.|+.|.+|...+...+..|..|.+.++++.+.......+++.++...... ..+....+......=.+++|+.
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEEEec
Confidence            346899999669999999998888999999999988777666678889888765432 1122233333222224788887


Q ss_pred             Ccc
Q psy14589        189 TDP  191 (655)
Q Consensus       189 G~~  191 (655)
                      +..
T Consensus        88 Svk   90 (152)
T d2pv7a2          88 SVK   90 (152)
T ss_dssp             SCC
T ss_pred             ccC
Confidence            665

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=94.30  E-value=0.049  Score=49.47  Aligned_cols=71  Identities=10%  Similarity=-0.052  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C---CCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L---GADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L---GAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      .+|.+|+|.|+ ||.+.+++..+...+.+|+.+.|+.++.+.+.+ +   +....+.....           ....+|++
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-----------~~~~~dii   83 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-----------PLQTYDLV   83 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-----------CCSCCSEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-----------ccccccee
Confidence            48999999999 999999988777767799999999988776532 2   22222221110           01268999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      ++|++..
T Consensus        84 IN~tp~g   90 (171)
T d1p77a1          84 INATSAG   90 (171)
T ss_dssp             EECCCC-
T ss_pred             eeccccc
Confidence            9998754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.046  Score=53.66  Aligned_cols=78  Identities=15%  Similarity=0.016  Sum_probs=46.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEE---EEecChHHHH----HHHhC---CCcE-E--EeCCccchhHHHHHHHhcC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVF---ASVGCPVGVA----KAYGL---GADY-V--VDHTIRELDRFANQILSYG  178 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Vi---at~~s~~k~~----~a~~L---GAd~-v--Id~~~~~~~d~~~~i~~~~  178 (655)
                      +.|+|+|||+|||.+.++.....|++|+   .+.++.++.+    .++++   |... .  .|.++.  ++..+.+.+..
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~   80 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS--KSVAAARERVT   80 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH--HHHHHHHHTCT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccch--Hhhhhhhhhcc
Confidence            3468999999999999887777898754   4444433222    23333   3222 1  355443  24444444432


Q ss_pred             -CCeeEEEeCCCcc
Q psy14589        179 -SELDADHPGFTDP  191 (655)
Q Consensus       179 -~gvDvV~D~vG~~  191 (655)
                       +.+|+++.+.|..
T Consensus        81 ~g~idilvnnag~~   94 (285)
T d1jtva_          81 EGRVDVLVCNAGLG   94 (285)
T ss_dssp             TSCCSEEEECCCCC
T ss_pred             ccchhhhhhccccc
Confidence             4799999888754

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.0038  Score=55.96  Aligned_cols=108  Identities=10%  Similarity=0.096  Sum_probs=69.1

Q ss_pred             cCChhhhhhHH-hhhh---ccccccccccchhHhhhhhhHHHhCCCCC----CCCCCcc---ccccccccc---------
Q psy14589          8 DYTAEETKTWG-EVFR---NLTKLYPTHACKEHNHVFPLLIQNCGYAE----DNIPQLE---DISKFLKDS---------   67 (655)
Q Consensus         8 ~y~~~e~~~W~-~~~~---~~~~~l~~~aC~~~~~G~~~l~~~~~y~~----~~iP~le---~V~~~l~~~---------   67 (655)
                      +|+++|+..+. ++..   .-..++.+..+...+.. |+++..+.++.    ..+|+.+   .|.+....+         
T Consensus        10 ~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~-D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV   88 (150)
T d1yb5a1          10 EFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPV-ETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV   88 (150)
T ss_dssp             SCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHH-HHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEE
T ss_pred             ccCCcceEEEEeecCCCCCCCCeEEEEEEEecCccc-chhhhcCCcCccccccccCccceeeeeEeecceeeccccCccc
Confidence            46666665543 2322   23567777777777777 77887776642    3445544   222222222         


Q ss_pred             -------CCcE---EeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEE
Q psy14589         68 -------TGFS---LRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFII  117 (655)
Q Consensus        68 -------~g~~---~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~  117 (655)
                             .+|+   +++..   .+++++++++||+++++.+|+|+++...+.. +.|++|||.
T Consensus        89 ~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~-~~G~~vliL  150 (150)
T d1yb5a1          89 FTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSG-ATGKMILLL  150 (150)
T ss_dssp             EESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSC-CSSEEEEEC
T ss_pred             cccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCc-ccCCEEEEC
Confidence                   2333   23322   2457889999999999999999998888887 899999984

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.19  E-value=0.023  Score=55.27  Aligned_cols=93  Identities=13%  Similarity=0.015  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCc-EEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .++.+||=.|+  |.|..+..+++.. +++|++++.+++-++.+++.... ..+.....   +    +.-..+.+|+|+.
T Consensus        83 ~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~---~----l~~~~~sfD~v~~  153 (268)
T d1p91a_          83 DKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH---R----LPFSDTSMDAIIR  153 (268)
T ss_dssp             TTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT---S----CSBCTTCEEEEEE
T ss_pred             CCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh---h----ccCCCCCEEEEee
Confidence            47889998898  5566777788775 67999999999888888653322 22211110   0    0001236999996


Q ss_pred             CCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        187 GFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       187 ~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ...-..   +++..++|||||++++..
T Consensus       154 ~~~~~~---~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         154 IYAPCK---AEELARVVKPGGWVITAT  177 (268)
T ss_dssp             ESCCCC---HHHHHHHEEEEEEEEEEE
T ss_pred             cCCHHH---HHHHHHHhCCCcEEEEEe
Confidence            554446   788999999999999875

>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: IlvH-like
domain: Acetolactate synthase small subunit, IlvH
species: Nitrosomonas europaea [TaxId: 915]

Probab=94.15  E-value=0.069  Score=42.37  Aligned_cols=70  Identities=11%  Similarity=0.190  Sum_probs=56.3

Q ss_pred             EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEE
Q psy14589        262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINI  333 (655)
Q Consensus       262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~i  333 (655)
                      .++...+.| +||-|+++..+|+.+|+|+..+..-|... ++-.++-+-++| ++.+.++++.|++.-+-+++
T Consensus         3 ~tisv~veN-~pGvL~Ris~lF~rRg~NI~Sltv~~te~-~~iSRmtivv~~~~~~i~qi~kQL~KlvdVi~V   73 (77)
T d2pc6a2           3 HIISLLMEN-EAGALSRVAGLFSARGYNIESLSVAPTED-PTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKL   73 (77)
T ss_dssp             EEEEEEEEC-STTHHHHHHHHHHHHTCCCCEEEEEECSS-TTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEE
T ss_pred             EEEEEEEEC-CccHHHHHHHHHhccCcceEEEEEeccCC-CCeEEEEEEEECCHHHHHHHHHHHhCCcCEEEE
Confidence            345555667 89999999999999999999999888765 455677777787 77888899999988765554

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.10  E-value=0.032  Score=54.63  Aligned_cols=97  Identities=10%  Similarity=-0.011  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc------EEEeCCccchhHHHHHHHhcC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD------YVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd------~vId~~~~~~~d~~~~i~~~~  178 (655)
                      +++.+||=.|+  |.|..++.+|+. |++|++++.|++-++.|++    .+..      .+.+....   ... .-....
T Consensus        55 ~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~  127 (292)
T d1xvaa_          55 HGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL---TLD-KDVPAG  127 (292)
T ss_dssp             TTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG---GHH-HHSCCT
T ss_pred             cCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccc---ccc-cccCCC
Confidence            35778999998  677788888875 9999999999987766643    2221      11111110   111 111112


Q ss_pred             CCeeEEEeCCCc------------chHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTD------------PVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~------------~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..+|+|+.....            ..-..++.+.+.|+|||++|+-
T Consensus       128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~  173 (292)
T d1xvaa_         128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  173 (292)
T ss_dssp             TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence            379988853211            0112478888999999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.07  E-value=0.016  Score=54.54  Aligned_cols=36  Identities=28%  Similarity=0.217  Sum_probs=31.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG  147 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k  147 (655)
                      +++||+||++|||.+.++.....|++|+.+++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            578999999999999998888889999999987654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.05  E-value=0.18  Score=48.07  Aligned_cols=94  Identities=13%  Similarity=-0.036  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCC-------------cEEEeCCccc-hhHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGA-------------DYVVDHTIRE-LDRFANQI  174 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGA-------------d~vId~~~~~-~~d~~~~i  174 (655)
                      .|.+|+|.|- |.||..+++++..+|++|++++.+..+.+.+.. .|+             |.++.-.... .+  .+.+
T Consensus        38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~cDIl~PcA~~~~I~--~~~~  114 (230)
T d1leha1          38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALGAVLN--DFTI  114 (230)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECSCSCCBS--TTHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCcccccccccEecccccccccC--hHHh
Confidence            8999999999 999999999999999999999988887766643 443             3222111100 00  0111


Q ss_pred             HhcCCCeeEEEeCCCc-chHHHHHHHHHHhccccceEE
Q psy14589        175 LSYGSELDADHPGFTD-PVYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       175 ~~~~~gvDvV~D~vG~-~~~~~l~~~l~~l~~gGrlv~  211 (655)
                      .++  .+.+|++..-+ .+   -.++-+.|...|.+|.
T Consensus       115 ~~l--~ak~Ive~ANn~~t---~~ea~~~L~~rGI~~i  147 (230)
T d1leha1         115 PQL--KAKVIAGSADNQLK---DPRHGKYLHELGIVYA  147 (230)
T ss_dssp             HHC--CCSEECCSCSCCBS---SHHHHHHHHHHTCEEC
T ss_pred             hcc--CccEEEecccCCCC---CchHHHHHHhhCcEEE
Confidence            122  45678777733 34   3566677877787654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.03  E-value=0.034  Score=49.34  Aligned_cols=39  Identities=8%  Similarity=0.037  Sum_probs=34.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA  151 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a  151 (655)
                      +|.|.||+|++|....+.....|++|+..+|++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            688998889999999999888999999999999887665

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=93.97  E-value=0.014  Score=51.11  Aligned_cols=89  Identities=11%  Similarity=0.091  Sum_probs=58.4

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCC----CCCCCCcccccc-----cc--cccCCcE---EeecCC---CCCCCCHHhH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYA----EDNIPQLEDISK-----FL--KDSTGFS---LRPVAG---LLSSRDFLAG   87 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~----~~~iP~le~V~~-----~l--~~~~g~~---~~~v~~---l~~~~s~~eA   87 (655)
                      .+++.+..+...+.. |++...+.+.    ...+|+.|.+..     +.  ...++|+   +++...   +++++|+++|
T Consensus        26 ~eVlVkv~a~gin~~-D~~~~~G~~~~~~~~P~v~G~E~~G~VvGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~a  104 (131)
T d1iz0a1          26 GEVVLRVEAVGLNFA-DHLMRLGAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGP  104 (131)
T ss_dssp             TEEEEEEEEEEECHH-HHHHHHTCSSSCCCSSBCCCCEEEEEETTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEE
T ss_pred             CEEEEEEEEEecccc-ccccccccccccccceeEeeeeeEEeeccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHH
Confidence            455666666666654 7888877763    344566652221     11  1123444   344333   4678999999


Q ss_pred             hhhhhHHHHHHHHhhcCCCCCCCCCEEEEE
Q psy14589         88 LAFRVFHSTQYIRHPSKPLYTPEPDTLFII  117 (655)
Q Consensus        88 Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~  117 (655)
                      |++++++.|||+++++.++   .|++||+.
T Consensus       105 a~~~~~~~Ta~~al~~~g~---~g~tvl~l  131 (131)
T d1iz0a1         105 VFPFAEAEAAFRALLDRGH---TGKVVVRL  131 (131)
T ss_dssp             EEEGGGHHHHHHHTTCTTC---CBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhccc---CCCEEEEC
Confidence            9999999999999988775   59999873

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.95  E-value=0.14  Score=48.08  Aligned_cols=93  Identities=13%  Similarity=0.072  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc-EEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD-YVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd-~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      +++++||=.|+  |.|..+..+++ .|++|++++.|++-++.|++    .+.. .++.-.-.   ++     ...+.+|+
T Consensus        40 ~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~---~l-----~~~~~fD~  108 (251)
T d1wzna1          40 REVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVL---EI-----AFKNEFDA  108 (251)
T ss_dssp             SCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGG---GC-----CCCSCEEE
T ss_pred             CCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhh---hc-----ccccccch
Confidence            57789999998  34778888887 58999999999987776653    3432 23322111   11     11237999


Q ss_pred             EEeCCCcc-------hHHHHHHHHHHhccccceEEE
Q psy14589        184 DHPGFTDP-------VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       184 V~D~vG~~-------~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |+-.-+.-       ....++.+.++|++||++++-
T Consensus       109 I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii~  144 (251)
T d1wzna1         109 VTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD  144 (251)
T ss_dssp             EEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             HhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEEE
Confidence            88653321       113477888899999998764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.88  E-value=0.075  Score=46.62  Aligned_cols=77  Identities=14%  Similarity=0.061  Sum_probs=52.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY-GSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~  190 (655)
                      +|.|.|++|-+|..+++..+. .+.++++.....+.......-++|.+||.+.+.  ...+.++.. ..++-+|+-++|-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~--~~~~~~~~~~~~~~~~ViGTTG~   78 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPD--VVMGNLEFLIDNGIHAVVGTTGF   78 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTT--THHHHHHHHHHTTCEEEECCCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHH--HHHHHHHHHHhcCCCEEEecccc
Confidence            689999999999998887665 467776654444444555566889999988752  222222222 1267788888885


Q ss_pred             c
Q psy14589        191 P  191 (655)
Q Consensus       191 ~  191 (655)
                      .
T Consensus        79 ~   79 (135)
T d1yl7a1          79 T   79 (135)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.85  E-value=0.017  Score=56.34  Aligned_cols=94  Identities=11%  Similarity=-0.119  Sum_probs=61.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHHHHHHhcCCCe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      ++|++|+-.||  |+|..++.+|+.-+++|++++.+++..+.++    ..|.+   .+++....   ++   ..  .+.+
T Consensus       106 ~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~---~~---~~--~~~~  175 (260)
T d2frna1         106 KPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR---DF---PG--ENIA  175 (260)
T ss_dssp             CTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT---TC---CC--CSCE
T ss_pred             CCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH---Hh---cc--CCCC
Confidence            78999998887  6777888888864569999999998877764    34543   33332211   11   00  1258


Q ss_pred             eEEE-eCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADH-PGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~-D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |.|+ +..... .+.+..+++.+++||.+....
T Consensus       176 D~Ii~~~p~~~-~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         176 DRILMGYVVRT-HEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             EEEEECCCSSG-GGGHHHHHHHEEEEEEEEEEE
T ss_pred             CEEEECCCCch-HHHHHHHHhhcCCCCEEEEEe
Confidence            8655 433222 122788999999999877654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.82  E-value=0.036  Score=53.47  Aligned_cols=36  Identities=22%  Similarity=0.057  Sum_probs=32.1

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG  143 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~  143 (655)
                      ..+  +|.+|+|.|. |.||..+++++...|++|++++-
T Consensus        27 ~~l--~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGI--EGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCC--TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCC--CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            355  8999999998 99999999999999999988763

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.79  E-value=0.15  Score=41.87  Aligned_cols=71  Identities=15%  Similarity=0.132  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCCchHHHH-HHHHHHcCCeEEEEecCh-HHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        109 PEPDTLFIIGANRGNGLAA-IQVGKAYGLTVFASVGCP-VGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~a-vQlAk~~Ga~Viat~~s~-~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +..+++.+.|. ||+|+.+ +++++..|.+|.+.|... ...+.+++.|+.....+...   +    +    .+.|+|+-
T Consensus         6 ~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~---~----i----~~~d~vV~   73 (96)
T d1p3da1           6 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEE---H----I----EGASVVVV   73 (96)
T ss_dssp             TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGG---G----G----TTCSEEEE
T ss_pred             hhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccc---c----C----CCCCEEEE
Confidence            56789999999 9999777 789999999999999864 34556778998754444331   1    1    15788887


Q ss_pred             CCCcc
Q psy14589        187 GFTDP  191 (655)
Q Consensus       187 ~vG~~  191 (655)
                      +.+-+
T Consensus        74 S~AI~   78 (96)
T d1p3da1          74 SSAIK   78 (96)
T ss_dssp             CTTSC
T ss_pred             CCCcC
Confidence            76654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=93.79  E-value=0.081  Score=50.59  Aligned_cols=74  Identities=14%  Similarity=0.159  Sum_probs=48.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-----H---HHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCee
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-----G---VAKAYGLGADYVV-DHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-----k---~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .+|||+||+|-||..++..+...|.+|++++|++.     +   .......|++.+. |..+.  +.+.+    ...+.+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~--~~~~~----~~~~~~   77 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH--QRLVD----ALKQVD   77 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH--HHHHH----HHTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccc--hhhhh----hccCcc
Confidence            46999999999999999988889999999988642     2   2233456665542 33321  12222    222567


Q ss_pred             EEEeCCCcc
Q psy14589        183 ADHPGFTDP  191 (655)
Q Consensus       183 vV~D~vG~~  191 (655)
                      .++.+++..
T Consensus        78 ~~~~~~~~~   86 (312)
T d1qyda_          78 VVISALAGG   86 (312)
T ss_dssp             EEEECCCCS
T ss_pred             hhhhhhhhc
Confidence            777776543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.79  E-value=0.049  Score=51.77  Aligned_cols=33  Identities=21%  Similarity=0.120  Sum_probs=30.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC  144 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s  144 (655)
                      .+|||+||+|-||..++...+..|.+|++++++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            369999999999999999999999999999875

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=93.74  E-value=0.01  Score=52.69  Aligned_cols=108  Identities=11%  Similarity=-0.049  Sum_probs=64.6

Q ss_pred             cccCChhhhhhHHhhhhc---cccccccccchhHhhhhhhHHHhCCCCCCC---CCCcc---cccccccccCC-------
Q psy14589          6 RVDYTAEETKTWGEVFRN---LTKLYPTHACKEHNHVFPLLIQNCGYAEDN---IPQLE---DISKFLKDSTG-------   69 (655)
Q Consensus         6 ~~~y~~~e~~~W~~~~~~---~~~~l~~~aC~~~~~G~~~l~~~~~y~~~~---iP~le---~V~~~l~~~~g-------   69 (655)
                      +-.|+.+|+..|.++...   -.+++.+..+...+. .|++...+.++...   +++.+   .|.+.+..+++       
T Consensus         6 ~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~-~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV   84 (147)
T d1qora1           6 FHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINF-IDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRV   84 (147)
T ss_dssp             BSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCH-HHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTCEE
T ss_pred             EcccCCCceeEEEEecCCCCCCCEEEEEEEEecccc-eeeeeecCCCCCCcceeeeccccccceeeeeeeccccccccee
Confidence            346778888778766442   255666666666654 48888888875433   34444   22222222222       


Q ss_pred             ---------cE---EeecCC---CCCCCCHH--hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEE
Q psy14589         70 ---------FS---LRPVAG---LLSSRDFL--AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFI  116 (655)
Q Consensus        70 ---------~~---~~~v~~---l~~~~s~~--eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI  116 (655)
                               |+   .++...   ++++++++  +++++++...|+++++.+ ..+ ++|++|||
T Consensus        85 ~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~-~~G~~VLI  146 (147)
T d1qora1          85 VYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRA-TQGSSLLI  146 (147)
T ss_dssp             EESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTC-CCBCCEEE
T ss_pred             eeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCC-CCCCEEEe
Confidence                     32   222222   33456555  455667888899998865 456 89999998

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.70  E-value=0.12  Score=45.88  Aligned_cols=89  Identities=15%  Similarity=0.016  Sum_probs=57.3

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCC-cEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGA-DYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGA-d~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +|+|.|+ |-+|...+.-.+..|.  +|++.+++++.++.+++.|. +.+.+....    .      .....|+|+-|+.
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~----~------~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK----V------EDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG----G------GGTCCSEEEECSC
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh----h------hccccccccccCC
Confidence            6999998 9999988888888774  89999999999999999886 343322111    0      0014677777776


Q ss_pred             cch-HHHHHHHHHHhccccceEEE
Q psy14589        190 DPV-YRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~~-~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ... .+.++...+.++++-.++-+
T Consensus        72 ~~~~~~vl~~l~~~~~~~~ii~d~   95 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSEDATVTDQ   95 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             chhhhhhhhhhhcccccccccccc
Confidence            552 12234444445544444434

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.67  E-value=0.12  Score=48.66  Aligned_cols=74  Identities=15%  Similarity=0.129  Sum_probs=48.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH------HH---HHHhCCCcEEE-eCCccchhHHHHHHHhcCCCe
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG------VA---KAYGLGADYVV-DHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k------~~---~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gv  181 (655)
                      ++|||+||+|-+|..++..+...|.+|++++++...      ..   .....+++.+. |....  ....+.+.    +.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~----~~   77 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH--ASLVEAVK----NV   77 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCH--HHHHHHHH----TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccc--hhhhhhhh----hc
Confidence            579999999999999998888889999999886432      22   22344555432 22221  12222222    57


Q ss_pred             eEEEeCCCcc
Q psy14589        182 DADHPGFTDP  191 (655)
Q Consensus       182 DvV~D~vG~~  191 (655)
                      +.|+.+.+..
T Consensus        78 ~~vi~~~~~~   87 (307)
T d1qyca_          78 DVVISTVGSL   87 (307)
T ss_dssp             SEEEECCCGG
T ss_pred             eeeeeccccc
Confidence            8888888766

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.57  E-value=0.14  Score=44.96  Aligned_cols=83  Identities=10%  Similarity=0.042  Sum_probs=57.6

Q ss_pred             EEEEEcCCCchHHHHHH-HHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQ-VGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQ-lAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +|.+.|+ |.+|.+.++ +.++-+.+|++.++++++++.+.+ +|+. +.+..+    +    +    ...|+||=++-.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~----~----v----~~~Div~lavkP   67 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP----E----L----HSDDVLILAVKP   67 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC----C----C----CTTSEEEECSCH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc----c----c----cccceEEEecCH
Confidence            5888999 999997776 666644799999999999888754 6754 333221    1    1    146888888864


Q ss_pred             chHHHHHHHHHHhccccceEEE
Q psy14589        191 PVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       191 ~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..   +...++-+++.+++++-
T Consensus        68 ~~---~~~v~~~l~~~~~~viS   86 (152)
T d1yqga2          68 QD---MEAACKNIRTNGALVLS   86 (152)
T ss_dssp             HH---HHHHHTTCCCTTCEEEE
T ss_pred             HH---HHHhHHHHhhcccEEee
Confidence            45   66777777776666553

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=93.54  E-value=0.00011  Score=67.53  Aligned_cols=46  Identities=15%  Similarity=-0.050  Sum_probs=37.5

Q ss_pred             CHHhHhhhhhHHHHHHHHhhc-CCCCCCCCCEEEEEc-CCCchHHHHHH
Q psy14589         83 DFLAGLAFRVFHSTQYIRHPS-KPLYTPEPDTLFIIG-ANRGNGLAAIQ  129 (655)
Q Consensus        83 s~~eAAal~~a~~TA~~aL~~-~~~l~~~Gd~VLI~G-asGgVG~~avQ  129 (655)
                      +..+++++++.++|||+++.. .+.+ ++||+|+|+| |+||||++++|
T Consensus       127 ~~~~~~a~~~~~~ta~~~l~~~~~~~-~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         127 PAQSKANGKPNGLTDAKSIETLYDGT-KPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHHTTCSCCCCCCCCEEEECCSS-SCHHHHHHHHHHTGGGSCEEEE
T ss_pred             cchhhhhccchHHHHHHHHHHHhcCC-CCCCEEEEECccchhhhheEEe
Confidence            456667778889999999864 5677 9999999998 55889998877

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.40  E-value=0.18  Score=48.15  Aligned_cols=95  Identities=17%  Similarity=0.102  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHH-HHcCCeEEEEecCh-----------HHH---------------------HHHHhCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVG-KAYGLTVFASVGCP-----------VGV---------------------AKAYGLG  155 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlA-k~~Ga~Viat~~s~-----------~k~---------------------~~a~~LG  155 (655)
                      -+|.+|+|.|. |.||..+++.+ +..|++|++++-+.           ..+                     +.+....
T Consensus        29 l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (234)
T d1b26a1          29 PKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLELD  107 (234)
T ss_dssp             TTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHHHHHTSC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeeccccccccc
Confidence            38999999998 99999999876 67899998876221           111                     2233445


Q ss_pred             CcEEEeCCccchhHH-HHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEE
Q psy14589        156 ADYVVDHTIRELDRF-ANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       156 Ad~vId~~~~~~~d~-~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~  211 (655)
                      +|..+.-....  .+ .+.+.+.  .+.+|++.+-++.   ...+-+.|...|.+|.
T Consensus       108 ~DI~~PcA~~~--~I~~~~a~~l--~~~~I~e~AN~p~---t~~a~~~L~~rgI~~~  157 (234)
T d1b26a1         108 VDILVPAALEG--AIHAGNAERI--KAKAVVEGANGPT---TPEADEILSRRGILVV  157 (234)
T ss_dssp             CSEEEECSCTT--CBCHHHHTTC--CCSEEECCSSSCB---CHHHHHHHHHTTCEEE
T ss_pred             cceeecchhcc--cccHHHHHHh--hhceEeecCCCCC---CHHHHHHHHHCCeEEe
Confidence            55554322210  00 1111111  4678888887774   3456677888886555

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=93.32  E-value=0.18  Score=49.70  Aligned_cols=38  Identities=32%  Similarity=0.409  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG  147 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k  147 (655)
                      +-++|+|+||+|.+|..++..+...|.+|++++|++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            45789999999999999999888889999999987654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=93.19  E-value=0.032  Score=53.06  Aligned_cols=35  Identities=23%  Similarity=0.190  Sum_probs=30.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV  146 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~  146 (655)
                      +.|+|+||++|||.+.++.....|++|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            35799999999999999888888999999988643

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.16  E-value=0.08  Score=48.51  Aligned_cols=94  Identities=12%  Similarity=0.012  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCC--c--EEEeCCccchhHHHHHHHhcCCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGA--D--YVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGA--d--~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .++++||=.|+  |.|..++.+|+ .+.+|++++.++...+.+++    .+.  .  .++..      |+.+.+.  .+.
T Consensus        51 ~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~------d~~~~~~--~~~  119 (194)
T d1dusa_          51 DKDDDILDLGC--GYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS------DLYENVK--DRK  119 (194)
T ss_dssp             CTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC------STTTTCT--TSC
T ss_pred             CCCCeEEEEee--cCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc------chhhhhc--cCC
Confidence            68999998887  55667777776 56799999999887777753    332  2  22221      1111111  226


Q ss_pred             eeEEEeCC----Ccc-hHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGF----TDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~v----G~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+|+-..    +.+ ....++.+.+.|++||+++++.
T Consensus       120 fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  157 (194)
T d1dusa_         120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI  157 (194)
T ss_dssp             EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEEE
Confidence            99988532    222 2244778889999999987764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.98  E-value=0.1  Score=48.62  Aligned_cols=87  Identities=10%  Similarity=0.003  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|.+|.|.|. |.||..++++++.+|++|++.+...+....  ..+..    . .    ++.+.+.    ..|+|+-++.
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~--~~~~~----~-~----~l~~~l~----~sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELE--KKGYY----V-D----SLDDLYK----QADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCB----C-S----CHHHHHH----HCSEEEECSC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccc--cceee----e-c----ccccccc----ccccccccCC
Confidence            5899999999 999999999999999999999866443222  22211    1 1    2333333    2477666554


Q ss_pred             cc--hHHH-HHHHHHHhccccceEEE
Q psy14589        190 DP--VYRA-RRKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~--~~~~-l~~~l~~l~~gGrlv~v  212 (655)
                      ..  +... -.+.++.|+++..+|-+
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~  131 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNV  131 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEEC
T ss_pred             ccccccccccHHHHhhhCCccEEEec
Confidence            32  1000 14567777776655544

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=92.64  E-value=0.059  Score=51.44  Aligned_cols=99  Identities=15%  Similarity=0.094  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc-EEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD-YVVDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd-~vId~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++|++||=.|+  |.|..+..+++.-..+|+++|.|++-++.|++    ++.. .+. ....   |.........+.+|+
T Consensus        23 ~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~-f~~~---D~~~~~~~~~~~fD~   96 (252)
T d1ri5a_          23 KRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVF-FRAQ---DSYGRHMDLGKEFDV   96 (252)
T ss_dssp             CTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEE-EEES---CTTTSCCCCSSCEEE
T ss_pred             CCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceE-EEEc---chhhhcccccccceE
Confidence            68999998898  33556778887644589999999998777752    4432 221 1110   110000011226999


Q ss_pred             EEeCCCcch--------HHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGFTDPV--------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~vG~~~--------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+-.-.-..        ...+..+.+.|++||+++...
T Consensus        97 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~~  134 (252)
T d1ri5a_          97 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV  134 (252)
T ss_dssp             EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEEe
Confidence            875433221        123456667899999987753

>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
domain: Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
species: Escherichia coli [TaxId: 562]

Probab=92.62  E-value=0.28  Score=39.04  Aligned_cols=66  Identities=12%  Similarity=0.172  Sum_probs=48.8

Q ss_pred             CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCC
Q psy14589        260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCS  329 (655)
Q Consensus       260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~  329 (655)
                      +...+.+...| +||-|+++.++|+++++|+..+.+...  ....|. .++++. ++..++++++|++.-.
T Consensus        10 ~~~rl~i~~~d-~PGvla~I~~~l~~~~iNI~~~~~~~~--~~~~~a-~~~i~~D~~~~~~v~~~i~~l~~   76 (84)
T d1sc6a3          10 GGRRLMHIHEN-RPGVLTALNKIFAEQGVNIAAQYLQTS--AQMGYV-VIDIEADEDVAEKALQAMKAIPG   76 (84)
T ss_dssp             SSEEEEEEEES-CTTHHHHHHHHHHHTTCEEEEEEEEEC--SSEEEE-EEEEECCHHHHHHHHHHHHTSTT
T ss_pred             CCeEEEEEeCC-cCCHHHHHHHHHHHcCCCHHHhccccC--CCCcEE-EEEEECCCCCHHHHHHHHHCCCC
Confidence            34556666666 999999999999999999999876543  334565 577777 4556778888887643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.61  E-value=0.027  Score=53.13  Aligned_cols=76  Identities=16%  Similarity=0.093  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      .+.+|||+||+|-||..+++.+...|.  +|++++|++.+...-+.-..... .|..+     . +.+.+.-.++|+++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~-----~-~~~~~~~~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK-----L-DDYASAFQGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG-----G-GGGGGGGSSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc-----c-ccccccccccccccc
Confidence            567899999999999999988877785  89999886543221111112222 22222     1 122222237899999


Q ss_pred             CCCcc
Q psy14589        187 GFTDP  191 (655)
Q Consensus       187 ~vG~~  191 (655)
                      ++|..
T Consensus        87 ~~~~~   91 (232)
T d2bkaa1          87 CLGTT   91 (232)
T ss_dssp             CCCCC
T ss_pred             ccccc
Confidence            99864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.60  E-value=0.19  Score=40.65  Aligned_cols=68  Identities=19%  Similarity=0.121  Sum_probs=49.5

Q ss_pred             CEEEEEcCCCchHHHH-HHHHHHcCCeEEEEecCh-HHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        112 DTLFIIGANRGNGLAA-IQVGKAYGLTVFASVGCP-VGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       112 d~VLI~GasGgVG~~a-vQlAk~~Ga~Viat~~s~-~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .+|.+.|. ||+|+.+ +++++.+|..|.+.|..+ +..+.++++|+.....+...   ++        .+.|+|+-+.+
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~---~i--------~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSAD---NW--------YDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTT---SC--------CCCSEEEECTT
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccc---cc--------CCCCEEEEecC
Confidence            47889999 9999866 588899999999999886 45566889998754332221   11        25799887766


Q ss_pred             cc
Q psy14589        190 DP  191 (655)
Q Consensus       190 ~~  191 (655)
                      -+
T Consensus        70 I~   71 (89)
T d1j6ua1          70 VR   71 (89)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=92.56  E-value=0.24  Score=46.95  Aligned_cols=101  Identities=10%  Similarity=-0.004  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc---CCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY---GSE  180 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~---~~g  180 (655)
                      ..++||-.|.  ++|..++.+|+++  +++|++++.+++..+.++    +.|.+.-|.....+..+....+...   .+.
T Consensus        59 ~~k~iLEiGT--~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~~  136 (227)
T d1susa1          59 NAKNTMEIGV--YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS  136 (227)
T ss_dssp             TCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTTC
T ss_pred             CCCcEEEecc--hhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCCc
Confidence            4568999996  7777888888886  569999999998877775    4676543333222111333333221   236


Q ss_pred             eeEEE-eCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        181 LDADH-PGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       181 vDvV~-D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|.|| |+--....+-++.+++.|++||.+|.=
T Consensus       137 fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         137 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             eeEEEeccchhhhHHHHHHHHhhcCCCcEEEEc
Confidence            99986 443333324578999999999988875

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.41  E-value=0.12  Score=50.96  Aligned_cols=94  Identities=11%  Similarity=0.076  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-----------ChHHHHHHH--------------------hCCCcE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-----------CPVGVAKAY--------------------GLGADY  158 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-----------s~~k~~~a~--------------------~LGAd~  158 (655)
                      .|.+|+|.|- |.||..+++.+...|++|++++-           +.+++...+                    +..+|.
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~DI  113 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDI  113 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCCSCGGGCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCCcccccCCccE
Confidence            7999999999 99999999999999999988763           223443332                    234454


Q ss_pred             EEeCCccchhHH-HHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEE
Q psy14589        159 VVDHTIRELDRF-ANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       159 vId~~~~~~~d~-~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~  211 (655)
                      ++.-..+.  .+ .+.+.+.  ++.+|++..-++.   ...+.+.|+..|.+|.
T Consensus       114 liPaA~~~--~I~~~~a~~l--~ak~I~EgAN~P~---t~eA~~~L~~~gI~vi  160 (293)
T d1hwxa1         114 LIPAASEK--QLTKSNAPRV--KAKIIAEGANGPT---TPQADKIFLERNIMVI  160 (293)
T ss_dssp             EEECSSSS--CBCTTTGGGC--CCSEEECCSSSCB---CHHHHHHHHHTTCEEE
T ss_pred             Eeeccccc--cccHHHHHHH--hhCEEeccCCCCC---CcchHHHHHHCCCEEe
Confidence            44322110  00 0001111  5788999888885   4677788988886665

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.21  E-value=0.36  Score=44.63  Aligned_cols=96  Identities=10%  Similarity=0.046  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHH---cCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcC-CC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKA---YGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYG-SE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~---~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~-~g  180 (655)
                      ++|.+||=.|+  |.|..+..+++.   .|++|+++|.|++-++.|++    .+....+.....   +.    .... ..
T Consensus        38 ~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~---d~----~~~~~~~  108 (225)
T d1im8a_          38 TADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN---DI----RHVEIKN  108 (225)
T ss_dssp             CTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS---CT----TTCCCCS
T ss_pred             CCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc---hh----hcccccc
Confidence            68899999998  667777788875   47899999999987777753    332222211111   11    1111 25


Q ss_pred             eeEEEeCCCc------chHHHHHHHHHHhccccceEEEe
Q psy14589        181 LDADHPGFTD------PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       181 vDvV~D~vG~------~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+++-+..-      +....++.+.+.|+|||++++.-
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            6766543322      11245889999999999998863

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=92.19  E-value=0.053  Score=53.60  Aligned_cols=78  Identities=14%  Similarity=0.066  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-Hh----CCCcEEE-eCCccchhHHHHHHHhcCCCeeE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YG----LGADYVV-DHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~----LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      .|++|||+||+|-||..+++.+...|.+|+++++++.+...+ +.    -+...+. |-++.  +.+.+.+...  .+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~--~~l~~~~~~~--~~~~   82 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ--NKLLESIREF--QPEI   82 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH--HHHHHHHHHH--CCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccCh--Hhhhhhhhhc--hhhh
Confidence            578999999999999999999999999999999876532221 11    1333322 32222  1233333322  4688


Q ss_pred             EEeCCCcc
Q psy14589        184 DHPGFTDP  191 (655)
Q Consensus       184 V~D~vG~~  191 (655)
                      |+.+++..
T Consensus        83 v~~~aa~~   90 (356)
T d1rkxa_          83 VFHMAAQP   90 (356)
T ss_dssp             EEECCSCC
T ss_pred             hhhhhccc
Confidence            88888754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.07  E-value=0.15  Score=44.95  Aligned_cols=84  Identities=17%  Similarity=0.080  Sum_probs=60.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|.+.|+ |.+|.+.+.-....|.+|++.++++++.+.+ +++|+..+    .    +..+.+.    ..|+|+-|+...
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~----~----~~~~~~~----~~dvIilavkp~   68 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA----M----SHQDLID----QVDLVILGIKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC----S----SHHHHHH----TCSEEEECSCGG
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee----c----hhhhhhh----ccceeeeecchH
Confidence            5889999 9999987764445688999999998887776 56676432    1    2223333    479999999766


Q ss_pred             hHHHHHHHHHHhccccceEEE
Q psy14589        192 VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       192 ~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .   ....++.++++..++++
T Consensus        69 ~---~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          69 L---FETVLKPLHFKQPIISM   86 (152)
T ss_dssp             G---HHHHHTTSCCCSCEEEC
T ss_pred             h---HHHHhhhcccceeEecc
Confidence            6   77888888887777665

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.03  E-value=0.53  Score=41.70  Aligned_cols=97  Identities=12%  Similarity=0.035  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChH--H-HHHHHhCCCcEEEeCCccchhHHHHHH-----------
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPV--G-VAKAYGLGADYVVDHTIRELDRFANQI-----------  174 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~--k-~~~a~~LGAd~vId~~~~~~~d~~~~i-----------  174 (655)
                      .++|.|.|++|.||.-++++.+..  ..+|++.+....  + .+.++++....+.-......+++....           
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            378999999999999999999886  468877766543  2 233567888777544322111121111           


Q ss_pred             ---Hhc-CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceE
Q psy14589        175 ---LSY-GSELDADHPGFTDP-VYRARRKYFADLAFNYKHF  210 (655)
Q Consensus       175 ---~~~-~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv  210 (655)
                         .+. ...+|+|+.++.|- .   +...+.+++.|-++.
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~G---L~~tl~ai~~gk~ia  119 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAG---LKATLAAIRKGKTVA  119 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGG---HHHHHHHHHTTSEEE
T ss_pred             cchheecccccceeeeecCchhH---HHHHHHHHhcCCEEE
Confidence               111 12589999986554 7   888899998765543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.02  E-value=0.43  Score=43.23  Aligned_cols=94  Identities=15%  Similarity=0.094  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE-EeCCccchhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV-VDHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      ++| +||=.|+  |.|..+.-+++ +|++|++++.+++-++.++    +.|.+.+ +...+     +.+.  ...+.+|+
T Consensus        30 ~~g-rvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d-----~~~~--~~~~~fD~   98 (198)
T d2i6ga1          30 APG-RTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD-----LNTL--TFDGEYDF   98 (198)
T ss_dssp             CSC-EEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC-----TTTC--CCCCCEEE
T ss_pred             CCC-cEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhhee-----cccc--cccccccE
Confidence            455 8998898  58888888886 5999999999998776653    4565532 11111     0000  01236899


Q ss_pred             EEeCC-----Ccc-hHHHHHHHHHHhccccceEEEe
Q psy14589        184 DHPGF-----TDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       184 V~D~v-----G~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |+...     ..+ ....++.+.++|++||+++++.
T Consensus        99 I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          99 ILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             EEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            88532     111 1134677888899999998864

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.79  E-value=0.5  Score=42.35  Aligned_cols=97  Identities=11%  Similarity=0.067  Sum_probs=55.2

Q ss_pred             CCCCEEE-EEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCC-cEEEeCCccchhHHHHHHHhcCCCee
Q psy14589        109 PEPDTLF-IIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGA-DYVVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       109 ~~Gd~VL-I~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGA-d~vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .+|.+|| +.+|+|++|   +..+ ..|++|++++.+++..+.++    .+|. +.+.....   +.+..........+|
T Consensus        40 ~~g~~vLDl~~G~G~~~---i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~~~~~~~~~~~~fD  112 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVG---LEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLPEAKAQGERFT  112 (171)
T ss_dssp             TTCCEEEEETCSSCHHH---HHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHHHHHHTTCCEE
T ss_pred             cCCCeEEEeccccchhh---hhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hcccccccccCCccc
Confidence            5788888 444444444   4433 46999999999998877664    3454 34544332   233333333345799


Q ss_pred             EEEeCC--CcchHHHHHHHHH--HhccccceEEE
Q psy14589        183 ADHPGF--TDPVYRARRKYFA--DLAFNYKHFFF  212 (655)
Q Consensus       183 vV~D~v--G~~~~~~l~~~l~--~l~~gGrlv~v  212 (655)
                      +|+-.-  +.+..+.+...++  .++++|.+|+-
T Consensus       113 ~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             eeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            997322  1121122444443  47888876653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.71  E-value=0.31  Score=47.34  Aligned_cols=33  Identities=15%  Similarity=0.132  Sum_probs=30.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC  144 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s  144 (655)
                      +++||+||+|-||..++..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            579999999999999999888899999999974

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.63  E-value=0.13  Score=47.08  Aligned_cols=37  Identities=22%  Similarity=0.051  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG  147 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k  147 (655)
                      .|.+|.|.|. |.||...+++++..|++|++.++...+
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            6889999999 999999999999999999999876544

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.57  E-value=0.57  Score=41.62  Aligned_cols=89  Identities=17%  Similarity=0.146  Sum_probs=52.7

Q ss_pred             CEEEEEcCCCchHH-HHHHHHHHc-CCeEEEEec-Ch--HHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC--CCeeEE
Q psy14589        112 DTLFIIGANRGNGL-AAIQVGKAY-GLTVFASVG-CP--VGVAKAYGLGADYVVDHTIRELDRFANQILSYG--SELDAD  184 (655)
Q Consensus       112 d~VLI~GasGgVG~-~avQlAk~~-Ga~Viat~~-s~--~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~--~gvDvV  184 (655)
                      =+|.|.|+ |++|. +.+++.+.. ..+++++++ ++  .+.+++++.|....  +.     + .+.+.+..  .++|+|
T Consensus         5 irvaIIGa-G~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~--~~-----~-~d~l~~~~~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YA-----G-VEGLIKLPEFADIDFV   75 (157)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SS-----H-HHHHHHSGGGGGEEEE
T ss_pred             cEEEEEcC-cHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccc--cc-----c-eeeeeecccccccCEE
Confidence            47999995 99997 567787765 457777654 33  34567788886543  22     1 22222221  279999


Q ss_pred             EeCCCcc-hHHHHHHHHHHhccccceEE
Q psy14589        185 HPGFTDP-VYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       185 ~D~vG~~-~~~~l~~~l~~l~~gGrlv~  211 (655)
                      ++++... . ..-..+.+.++ .|..|+
T Consensus        76 f~ATpag~h-~~~~~~~~aa~-~G~~VI  101 (157)
T d1nvmb1          76 FDATSASAH-VQNEALLRQAK-PGIRLI  101 (157)
T ss_dssp             EECSCHHHH-HHHHHHHHHHC-TTCEEE
T ss_pred             EEcCCchhH-HHhHHHHHHHH-cCCEEE
Confidence            9998765 2 00123344454 465554

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.42  E-value=1.2  Score=42.76  Aligned_cols=33  Identities=12%  Similarity=0.006  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV  142 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~  142 (655)
                      -.|.+|+|.|. |.||..+++.+..+|++|+++.
T Consensus        34 l~g~~v~IQGf-GnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             STTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEe
Confidence            38999999998 9999999999999999998874

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.30  E-value=0.65  Score=41.91  Aligned_cols=97  Identities=10%  Similarity=-0.014  Sum_probs=59.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEe-cC-hHHHHHHHhCCCcEEEeCCccchhHHHHH-------HHhcCCCee
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYG-LTVFASV-GC-PVGVAKAYGLGADYVVDHTIRELDRFANQ-------ILSYGSELD  182 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~G-a~Viat~-~s-~~k~~~a~~LGAd~vId~~~~~~~d~~~~-------i~~~~~gvD  182 (655)
                      +|.|+|- |-||...++.+.... .+|+++- .+ ......+...|.+........ ...+.+.       +.+...++|
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vD   81 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEF-IPRFEKEGFEVAGTLNDLLEKVD   81 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGG-HHHHHHHTCCCSCBHHHHHTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccc-eeeecccCccccchhhhhhccCC
Confidence            6899998 999999988776554 5766553 22 244556677776654422211 0111110       000012799


Q ss_pred             EEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        183 ADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       183 vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +|+||+|.-.  ..+.+-..+..|-+.|+++
T Consensus        82 vViEcTG~f~--~~~~~~~hl~~G~k~Vi~s  110 (172)
T d2czca2          82 IIVDATPGGI--GAKNKPLYEKAGVKAIFQG  110 (172)
T ss_dssp             EEEECCSTTH--HHHHHHHHHHHTCEEEECT
T ss_pred             EEEECCCCCC--CHHHHHHHHHcCCCEEEEC
Confidence            9999999873  1566666788887877764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.30  E-value=0.2  Score=49.24  Aligned_cols=74  Identities=11%  Similarity=-0.059  Sum_probs=47.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecC----hHHHHH---HHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGC----PVGVAK---AYGLGADYV-VDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s----~~k~~~---a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      +|||+||+|=||+.++..+...|.+|+++++.    .+....   ...-+...+ .|-.+.  +.+.+.+++.  ++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~l~~~~~~~--~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE--ALMTEILHDH--AIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCH--HHHHHHHHHT--TCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCH--HHHHHHHhcc--CCCEE
Confidence            69999999999999999888889999998742    222222   222334332 233332  2344444433  58999


Q ss_pred             EeCCCc
Q psy14589        185 HPGFTD  190 (655)
Q Consensus       185 ~D~vG~  190 (655)
                      +.+++.
T Consensus        78 iHlAa~   83 (338)
T d1udca_          78 IHFAGL   83 (338)
T ss_dssp             EECCSC
T ss_pred             EECCCc
Confidence            998753

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.29  E-value=0.24  Score=49.62  Aligned_cols=32  Identities=16%  Similarity=0.081  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASV  142 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~  142 (655)
                      |.+|||+||+|=||..+++.+...|.+|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            78999999999999999988888999999987

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.26  E-value=1.8  Score=41.57  Aligned_cols=133  Identities=10%  Similarity=0.065  Sum_probs=77.9

Q ss_pred             ecCCCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---ChHHHHH
Q psy14589         74 PVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG---CPVGVAK  150 (655)
Q Consensus        74 ~v~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~---s~~k~~~  150 (655)
                      +...+-+.-|+.+=.+..     +...+.+.+.+ .++.+ +|...+|.-|+++...|+.+|.+++++..   ++.|.+.
T Consensus        29 K~E~~~ptGSfK~Rga~~-----~i~~a~~~g~~-~~~~~-vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~  101 (292)
T d2bhsa1          29 KLEGNNPAGSVKDRAALS-----MIVEAEKRGEI-KPGDV-LIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA  101 (292)
T ss_dssp             EEGGGSTTSBTHHHHHHH-----HHHHHHHTTSC-CTTSE-EEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHH
T ss_pred             EeCCCCCCCCcHHHHHHH-----HHHHHHHhCCc-CCCce-eeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHH
Confidence            334444455666543321     12223345655 45554 55555599999999999999997544443   5678888


Q ss_pred             HHhCCCcEEEeCCccc-------------------------hhHH-------HHHH-HhcCCCeeEEEeCCCcc-hHHHH
Q psy14589        151 AYGLGADYVVDHTIRE-------------------------LDRF-------ANQI-LSYGSELDADHPGFTDP-VYRAR  196 (655)
Q Consensus       151 a~~LGAd~vId~~~~~-------------------------~~d~-------~~~i-~~~~~gvDvV~D~vG~~-~~~~l  196 (655)
                      ++.+||..++......                         .+++       ..++ .+..+.+|+++-++|+. ....+
T Consensus       102 ~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~  181 (292)
T d2bhsa1         102 MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGV  181 (292)
T ss_dssp             HHHTTCEEEEECTTTHHHHHHHHHHHHHHHTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHH
T ss_pred             HHHhCCCcceeecccchHHHHHHHhhccccccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhh
Confidence            9999998654322110                         0001       1111 12223589998888876 42335


Q ss_pred             HHHHHHhccccceEEEe
Q psy14589        197 RKYFADLAFNYKHFFFF  213 (655)
Q Consensus       197 ~~~l~~l~~gGrlv~v~  213 (655)
                      ...++...+..+++.+-
T Consensus       182 ~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         182 SRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             HHHHHTSSSCCEEEEEE
T ss_pred             hhhhhhccCcceEEEec
Confidence            56666677778877763

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.12  E-value=0.089  Score=52.15  Aligned_cols=92  Identities=12%  Similarity=0.046  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHH---HHHHhCCCc---EEEeCCccchhHHHHHHHhcCCCe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGV---AKAYGLGAD---YVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~---~~a~~LGAd---~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      .+|++||-.|+  |.|.+++.+|| +|| +|++++.++.-.   +.++..|..   .++.....   +    +......+
T Consensus        32 ~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~---~----~~~~~~~~  101 (316)
T d1oria_          32 FKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVE---E----VELPVEKV  101 (316)
T ss_dssp             HTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTT---T----CCCSSSCE
T ss_pred             CCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHH---H----ccccccee
Confidence            58999999998  34667776666 687 799999876321   122333432   22322111   1    11112368


Q ss_pred             eEEEeC-CCcc-----hH-HHHHHHHHHhccccceE
Q psy14589        182 DADHPG-FTDP-----VY-RARRKYFADLAFNYKHF  210 (655)
Q Consensus       182 DvV~D~-vG~~-----~~-~~l~~~l~~l~~gGrlv  210 (655)
                      |+|+.. .+..     .. ..+...-+.|++||+++
T Consensus       102 D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         102 DIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             EEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            998643 2221     21 12344456899999886

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.07  E-value=0.28  Score=42.32  Aligned_cols=92  Identities=12%  Similarity=-0.019  Sum_probs=58.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~  191 (655)
                      +|.|+|++|-+|++..++++..|.++++....... +.  --.+|.+||.+.++  ...+.++... .+.-+|+-++|-.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-~~--~~~~DVvIDFS~p~--~~~~~l~~~~~~~~p~ViGTTG~~   76 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-EE--LDSPDVVIDFSSPE--ALPKTVDLCKKYRAGLVLGTTALK   76 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-EE--CSCCSEEEECSCGG--GHHHHHHHHHHHTCEEEECCCSCC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-HH--hccCCEEEEecCHH--HHHHHHHHHHhcCCCEEEEcCCCC
Confidence            68999999999999999999999987655322211 11  13589999998863  2333332221 2678999999865


Q ss_pred             hHHHHHHHHHHhccccceEE
Q psy14589        192 VYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       192 ~~~~l~~~l~~l~~gGrlv~  211 (655)
                      .  .-.+.++.+++.-.++.
T Consensus        77 ~--~~~~~i~~~ak~~pv~~   94 (128)
T d1vm6a3          77 E--EHLQMLRELSKEVPVVQ   94 (128)
T ss_dssp             H--HHHHHHHHHTTTSEEEE
T ss_pred             H--HHHHHHHHHHhhCCEEe
Confidence            2  13344555554433333

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.07  E-value=0.11  Score=48.16  Aligned_cols=35  Identities=31%  Similarity=0.281  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      .|.+|.|.|. |.||...+++++.+|++|++.++..
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            7899999999 9999999999999999999988754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.07  E-value=0.12  Score=51.46  Aligned_cols=75  Identities=19%  Similarity=-0.039  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE--EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV--VDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ++.+|||+||+|=||..++..+...|.+|+++++...+. ......-...  +|..+.  +++.+.    ..++|.|+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~D~~~~--~~~~~~----~~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-MTEDMFCDEFHLVDLRVM--ENCLKV----TEGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-SCGGGTCSEEEECCTTSH--HHHHHH----HTTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc-hhhhcccCcEEEeechhH--HHHHHH----hhcCCeEeec
Confidence            578999999999999999998888999999997654321 1112222222  232221  122222    2368999887


Q ss_pred             CCcc
Q psy14589        188 FTDP  191 (655)
Q Consensus       188 vG~~  191 (655)
                      ++..
T Consensus        87 a~~~   90 (363)
T d2c5aa1          87 AADM   90 (363)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            7443

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.91  E-value=0.06  Score=48.64  Aligned_cols=77  Identities=6%  Similarity=-0.093  Sum_probs=49.2

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhhhhHHHHHHHHhhcCC
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAFRVFHSTQYIRHPSKP  105 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL~~~~  105 (655)
                      .++.|..|..|..++|.+..+.-....+         ....|.+++...   ++++++++.++++.+++.|++++++ .+
T Consensus        96 ~~g~~~~~~~g~~~~~~~~~~~G~~~~g---------g~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~~-~g  165 (175)
T d1llua1          96 ACGCCEHCLTGWETLCESQQNTGYSVNG---------GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMR-AG  165 (175)
T ss_dssp             CCSSSHHHHTTCGGGCTTCEEBTTTBCC---------SSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHHH-TT
T ss_pred             cCCccccccCCccccccccccccccccc---------ccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHHH-hC
Confidence            4678899999987776554431111110         112233444332   4467788888888999999999874 55


Q ss_pred             CCCCCCCEEEEE
Q psy14589        106 LYTPEPDTLFII  117 (655)
Q Consensus       106 ~l~~~Gd~VLI~  117 (655)
                      .+  +|++|||+
T Consensus       166 ~~--~G~~VLVl  175 (175)
T d1llua1         166 QI--EGRIVLEM  175 (175)
T ss_dssp             CC--SSEEEEEC
T ss_pred             CC--CCCEEEeC
Confidence            55  79999984

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=90.89  E-value=0.25  Score=49.19  Aligned_cols=34  Identities=15%  Similarity=0.095  Sum_probs=29.3

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      +.|||+||+|=||..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            5789999999999999988888899999999743

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.84  E-value=0.11  Score=47.52  Aligned_cols=69  Identities=12%  Similarity=0.110  Sum_probs=44.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      ++|||+||+|-||..+++.+...|-  +|++..+++..        ...-++....   ++.+........+|.|+.++|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~~~~~~~---d~~~~~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVG---PLAELLPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBS---CHHHHGGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hccccccccc---chhhhhhccccchheeeeeee
Confidence            6899999999999999988777785  67766654311        1101121111   333333334447899999987


Q ss_pred             cc
Q psy14589        190 DP  191 (655)
Q Consensus       190 ~~  191 (655)
                      ..
T Consensus        72 ~~   73 (212)
T d2a35a1          72 TT   73 (212)
T ss_dssp             CC
T ss_pred             ee
Confidence            65

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.75  E-value=0.17  Score=49.62  Aligned_cols=73  Identities=14%  Similarity=0.072  Sum_probs=46.9

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHh-CCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYG-LGADYVV-DHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~-LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +|||+||+|-||..+++.....| .+|++++....+.....+ ..+..+. |-+..  +++.+.+.+   ++|+|+-+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~--~~~~~~~~~---~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIH--SEWIEYHVK---KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTC--SHHHHHHHH---HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCCh--HHHHHHHHh---CCCccccccc
Confidence            69999999999999998776777 589999876554443333 2232221 22221  134443332   5899998877


Q ss_pred             c
Q psy14589        190 D  190 (655)
Q Consensus       190 ~  190 (655)
                      -
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=90.53  E-value=0.15  Score=47.01  Aligned_cols=36  Identities=17%  Similarity=0.101  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV  146 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~  146 (655)
                      .|.+|.|.|. |.||...+++++..|.+|++.+....
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            4899999999 99999999999999999999887543

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=90.41  E-value=0.11  Score=49.57  Aligned_cols=160  Identities=13%  Similarity=-0.017  Sum_probs=87.8

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .+ ....+||=.|+  |.|..+..+++.. ++++++++. ++-.+.+    .+.|...-+.....   |+.+   ....+
T Consensus        77 d~-~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~---D~~~---~~~~~  146 (253)
T d1tw3a2          77 DW-TNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG---DFFE---PLPRK  146 (253)
T ss_dssp             CC-TTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC---CTTS---CCSSC
T ss_pred             CC-ccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc---cchh---hcccc
Confidence            44 56678998786  6788999999987 678888886 4333333    33443211111111   1110   11236


Q ss_pred             eeEEEeCCC-----cc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCC
Q psy14589        181 LDADHPGFT-----DP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCH  254 (655)
Q Consensus       181 vDvV~D~vG-----~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~  254 (655)
                      +|+|+-..-     .+ ..+.++.+.++|+|||++++.-..                               .+..  ..
T Consensus       147 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~~-------------------------------~~~~--~~  193 (253)
T d1tw3a2         147 ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD-------------------------------DLHE--NS  193 (253)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC-------------------------------BCGG--GC
T ss_pred             hhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEecc-------------------------------CCCC--Cc
Confidence            899873321     11 113477888999999999886310                               0000  00


Q ss_pred             CCCCCCeEE--EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEE
Q psy14589        255 SCPFSLFDF--VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMV  309 (655)
Q Consensus       255 ~~~~~~kts--l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfV  309 (655)
                      .........  ++..... +.-+..+..+++++.|..+..+...|....++.....+
T Consensus       194 ~~~~~~~~dl~~~~~~~g-~~rt~~e~~~ll~~AGf~~~~v~~~~~p~~~~~~~li~  249 (253)
T d1tw3a2         194 FNEQFTELDLRMLVFLGG-ALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLV  249 (253)
T ss_dssp             CSHHHHHHHHHHHHHHSC-CCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEE
T ss_pred             chhHHHHhhHHHHhhCCC-cCCCHHHHHHHHHHCCCeEEEEEECCCCCCCccEEEEE
Confidence            000000000  0000111 22246678889999999988888888877776655443

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.38  E-value=0.9  Score=44.88  Aligned_cols=98  Identities=9%  Similarity=-0.093  Sum_probs=59.9

Q ss_pred             CCCCEEE-EEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh------CCCc--EEEeCCccchhHHHHHHHhcC
Q psy14589        109 PEPDTLF-IIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG------LGAD--YVVDHTIRELDRFANQILSYG  178 (655)
Q Consensus       109 ~~Gd~VL-I~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~------LGAd--~vId~~~~~~~d~~~~i~~~~  178 (655)
                      .+|++|| +..++|+.+   +.+| ..|| +|++++.++..++.+++      ++.+  .++.....   ++.+...+.+
T Consensus       143 ~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~---~~l~~~~~~~  215 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF---DYFKYARRHH  215 (317)
T ss_dssp             TBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH---HHHHHHHHTT
T ss_pred             hCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH---HHHHHHHhhc
Confidence            5799999 444455554   3333 3577 79999999987777652      3322  23432221   3444444445


Q ss_pred             CCeeEEEeCCCc-------------chHHHHHHHHHHhccccceEEEe
Q psy14589        179 SELDADHPGFTD-------------PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       179 ~gvDvV~D~vG~-------------~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ..+|+|+---..             ..-+.+..++++|++||.++...
T Consensus       216 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~s  263 (317)
T d2b78a2         216 LTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST  263 (317)
T ss_dssp             CCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            589998742211             01145678889999999988764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.36  E-value=0.41  Score=42.26  Aligned_cols=66  Identities=15%  Similarity=0.060  Sum_probs=50.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|.|.|. |.+|...++-....|.+|++.++++++.+.+.+.|+..+ +       +..+.++    ..|+|+-|+..+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~-~-------~~~e~~~----~~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA-S-------TAKAIAE----QCDVIITMLPNS   67 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-S-------SHHHHHH----HCSEEEECCSSH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhc-c-------cHHHHHh----CCCeEEEEcCCH
Confidence            5889999 999998887666689999999999999999999887532 1       1222333    368999998765

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.19  E-value=0.36  Score=45.33  Aligned_cols=101  Identities=10%  Similarity=0.005  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc--CCCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY--GSEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~--~~gv  181 (655)
                      ..++||-.|.  +.|..++.+|+++  +.+|++++.+++..+.++    ..|....+.....+..+....+...  .+.+
T Consensus        59 ~~k~vLEiGt--~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~f  136 (219)
T d2avda1          59 QAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF  136 (219)
T ss_dssp             TCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred             CCCeEEEEec--hhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCCc
Confidence            5678999996  6666777888876  569999999998877665    3565443332222111222222222  2379


Q ss_pred             eEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        182 DADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       182 DvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |.|+--.... ..+-++.+++.|++||-++.=
T Consensus       137 D~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         137 DVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence            9987554444 324478999999999988764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=90.18  E-value=0.089  Score=46.20  Aligned_cols=80  Identities=10%  Similarity=-0.020  Sum_probs=49.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc--EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD--YVVDHTIRELDRFANQILSYGSELDADHPGFTD  190 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd--~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~  190 (655)
                      +|+|.|+ |.+|.+........|..|..+++++++.+.....+.+  ........   +..+.+.    .+|+++-++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~D~iii~vka   73 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTA---NDPDFLA----TSDLLLVTLKA   73 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEE---SCHHHHH----TCSEEEECSCG
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCcccccccccc---chhhhhc----ccceEEEeecc
Confidence            7999999 9999887776666799999999887654332222211  11000000   1122222    58999999988


Q ss_pred             chHHHHHHHHHHh
Q psy14589        191 PVYRARRKYFADL  203 (655)
Q Consensus       191 ~~~~~l~~~l~~l  203 (655)
                      ..   .+..++.+
T Consensus        74 ~~---~~~~~~~l   83 (167)
T d1ks9a2          74 WQ---VSDAVKSL   83 (167)
T ss_dssp             GG---HHHHHHHH
T ss_pred             cc---hHHHHHhh
Confidence            75   44444444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=90.08  E-value=1.4  Score=38.10  Aligned_cols=93  Identities=14%  Similarity=0.073  Sum_probs=59.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH----HHHHHhCCCcEEEe-CCccchhHHHHHHHhcC-CCeeEEE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG----VAKAYGLGADYVVD-HTIRELDRFANQILSYG-SELDADH  185 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k----~~~a~~LGAd~vId-~~~~~~~d~~~~i~~~~-~gvDvV~  185 (655)
                      ++++|.|. |.+|..+++..+..|.+|++++.++++    .+.++..|...+.- ..+      .+.+++.+ ..+|.++
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d------~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND------SSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS------HHHHHHHTTTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcc------hHHHHHhccccCCEEE
Confidence            57999999 999999999988999999888887654    33344567655432 222      22333333 2688999


Q ss_pred             eCCCcchHHHHHH--HHHHhccccceEEE
Q psy14589        186 PGFTDPVYRARRK--YFADLAFNYKHFFF  212 (655)
Q Consensus       186 D~vG~~~~~~l~~--~l~~l~~gGrlv~v  212 (655)
                      -+++.+. .++..  ..+-+.+.-+++.-
T Consensus        77 ~~~~~d~-~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          77 ALSDNDA-DNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             ECSSCHH-HHHHHHHHHHHHTSSSCEEEE
T ss_pred             EccccHH-HHHHHHHHHHHhCCCCceEEE
Confidence            8887763 12333  33344555566654

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.99  E-value=0.029  Score=49.89  Aligned_cols=44  Identities=7%  Similarity=-0.084  Sum_probs=34.6

Q ss_pred             EeecCC---CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEc
Q psy14589         72 LRPVAG---LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIG  118 (655)
Q Consensus        72 ~~~v~~---l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~G  118 (655)
                      ++|...   +++++| .+||+++++++|||+++...+++  +|++|||+|
T Consensus       106 ~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~--~G~tVL~l~  152 (152)
T d1xa0a1         106 RLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGEL--RGRTVVRLA  152 (152)
T ss_dssp             EECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCC--CSEEEEECC
T ss_pred             eehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCC--CCCEEEEcC
Confidence            455433   345666 57899999999999999888888  499999986

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.99  E-value=0.47  Score=46.60  Aligned_cols=75  Identities=9%  Similarity=-0.005  Sum_probs=47.2

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HH---HHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VG---VAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDA  183 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k---~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDv  183 (655)
                      +.|||+||+|=||..++......|.+|+++++..    +.   .+....-+...+. |-.+.  +++...+...  ++|+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~--~~d~   77 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR--KGLEKVFKEY--KIDS   77 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCH--HHHHHHHHHS--CCCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCH--HHHHHHHhcc--CCCE
Confidence            4799999999999999988888899999886421    11   1222333444332 33322  2343333332  6899


Q ss_pred             EEeCCCc
Q psy14589        184 DHPGFTD  190 (655)
Q Consensus       184 V~D~vG~  190 (655)
                      |+.+++.
T Consensus        78 VihlAa~   84 (347)
T d1z45a2          78 VIHFAGL   84 (347)
T ss_dssp             EEECCSC
T ss_pred             EEEcccc
Confidence            9998764

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=89.80  E-value=0.36  Score=37.24  Aligned_cols=57  Identities=25%  Similarity=0.247  Sum_probs=40.8

Q ss_pred             EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589        264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS  327 (655)
Q Consensus       264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~  327 (655)
                      +.+.++| +||+|+++++.|++.+||+..+...+.++. .-..|-  ++   +..++.+.|++.
T Consensus         2 iaV~v~d-~pG~L~~v~~~L~~~~InI~~~y~~~~~~~-~~~vl~--vd---d~~~a~~~L~~~   58 (71)
T d2f06a1           2 VGISCPN-VPGALAKVLGFLSAEGVFIEYMYSFANNNV-ANVVIR--PS---NMDKCIEVLKEK   58 (71)
T ss_dssp             EEEEEES-STTHHHHHHHHHHHTTCCEEEEEEEEETTE-EEEEEE--ES---CHHHHHHHHHHT
T ss_pred             EEEEecC-CccHHHHHHHHHHHCCCCEEEEEEEcCCCc-EEEEEE--EC---CHHHHHHHHHHC
Confidence            4466788 999999999999999999999888776532 112222  22   345777777765

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=89.67  E-value=0.15  Score=46.69  Aligned_cols=43  Identities=12%  Similarity=0.042  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG  153 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~  153 (655)
                      .|.+|.|.|. |.||...+++++.+|.+|++.++........+.
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~   85 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE   85 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccc
Confidence            6889999999 999999999999999999999875433333333

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.66  E-value=0.82  Score=40.21  Aligned_cols=67  Identities=12%  Similarity=-0.015  Sum_probs=50.8

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      ++|.+.|. |-+|...+.-....|.+|.+.++++++.+.+.+.|+...   .     +..+.+.    ..|+++-|+...
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~---~-----~~~e~~~----~~diii~~v~~~   68 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA---R-----SARDAVQ----GADVVISMLPAS   68 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC---S-----SHHHHHT----SCSEEEECCSCH
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc---c-----hhhhhcc----ccCeeeecccch
Confidence            46899999 999987666555579999999999999999999887643   1     1223332    479999999765

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.49  E-value=0.13  Score=50.61  Aligned_cols=100  Identities=11%  Similarity=0.001  Sum_probs=55.1

Q ss_pred             hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHH---HHHhCCCc---EEEeCCccchhHHHHH
Q psy14589        101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVA---KAYGLGAD---YVVDHTIRELDRFANQ  173 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~---~a~~LGAd---~vId~~~~~~~d~~~~  173 (655)
                      +.+...+ .+|++||-.|+  |.|..++.+|| .|| +|++++.++.-..   .+++.|..   .++.....   +    
T Consensus        27 i~~~~~~-~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~---~----   95 (311)
T d2fyta1          27 IYQNPHI-FKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIE---E----   95 (311)
T ss_dssp             HHHCGGG-TTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTT---T----
T ss_pred             HHhcccc-CCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHH---H----
Confidence            3333344 58999999998  36667776666 487 8999999875332   22333432   22322111   1    


Q ss_pred             HHhcCCCeeEEEe-CCCc----c-hHHHHHHH-HHHhccccceEE
Q psy14589        174 ILSYGSELDADHP-GFTD----P-VYRARRKY-FADLAFNYKHFF  211 (655)
Q Consensus       174 i~~~~~gvDvV~D-~vG~----~-~~~~l~~~-l~~l~~gGrlv~  211 (655)
                      +......+|+|+- ..+.    + ..+.+..+ -+.|+|||+++-
T Consensus        96 l~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~iip  140 (311)
T d2fyta1          96 VHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP  140 (311)
T ss_dssp             SCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred             hcCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEec
Confidence            1111237999874 2222    1 21223333 347999998873

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=89.45  E-value=0.41  Score=44.77  Aligned_cols=91  Identities=10%  Similarity=-0.026  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc-EEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD-YVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd-~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      ++++||=.|+  |.|..+..+++ +|.+|++++.|++-++.|++    .|.. .++. .+-  .++     +..+.+|+|
T Consensus        37 ~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~-~d~--~~~-----~~~~~fD~i  105 (246)
T d1y8ca_          37 VFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLAC-QDI--SNL-----NINRKFDLI  105 (246)
T ss_dssp             CTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEEC-CCG--GGC-----CCSCCEEEE
T ss_pred             CCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeec-cch--hhh-----ccccccccc
Confidence            6789999998  35667777776 58899999999987666643    4432 2232 111  011     112379999


Q ss_pred             EeCCCc------c--hHHHHHHHHHHhccccceEE
Q psy14589        185 HPGFTD------P--VYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       185 ~D~vG~------~--~~~~l~~~l~~l~~gGrlv~  211 (655)
                      +-..+.      .  ..+.++.+.+.|++||.+++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             ceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            853221      1  11236677778999998875

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.45  E-value=0.59  Score=46.24  Aligned_cols=98  Identities=12%  Similarity=-0.020  Sum_probs=56.3

Q ss_pred             CCCCEEE-EEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc----EEEeCCccchhHHHHHHHhcCC
Q psy14589        109 PEPDTLF-IIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD----YVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       109 ~~Gd~VL-I~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd----~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      .+|.+|| +..++|+.++   ++|+ .||+|+.++.++..++.+++    .|.+    .++. .+.  -++.+...+.+.
T Consensus       131 ~~~~rVLdlf~~tG~~sl---~aa~-~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~-~D~--~~~l~~~~~~~~  203 (309)
T d2igta1         131 DRPLKVLNLFGYTGVASL---VAAA-AGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC-EDA--MKFIQREERRGS  203 (309)
T ss_dssp             SSCCEEEEETCTTCHHHH---HHHH-TTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC-SCH--HHHHHHHHHHTC
T ss_pred             cCCCeEEEecCCCcHHHH---HHHh-CCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEe-CCH--HHhHHHHhhcCC
Confidence            4688999 5555555444   4443 58999999999988888753    2322    2232 211  123333333455


Q ss_pred             CeeEEEeC-C-------Cc-----ch-HHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPG-F-------TD-----PV-YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~-v-------G~-----~~-~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+|+|+-- -       +.     .. ..+++.+.++++++|.+++..
T Consensus       204 ~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t  251 (309)
T d2igta1         204 TYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT  251 (309)
T ss_dssp             CBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred             CCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEe
Confidence            79998631 1       11     11 133456777889999866653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.45  E-value=0.2  Score=42.16  Aligned_cols=37  Identities=16%  Similarity=0.232  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV  146 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~  146 (655)
                      +.+.+|.|.|+ |-+|.|.++-|+.+|.+|++.+.+++
T Consensus         9 ~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2           9 PAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            45567999999 99999999999999999999998754

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.36  E-value=0.25  Score=46.28  Aligned_cols=99  Identities=15%  Similarity=0.044  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC--CCe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG--SEL  181 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~--~gv  181 (655)
                      ..++||-.|.  +.|..++.+|+++  |.+|++++.+++..+.++    ..|...-|.....+..+....+.+..  +.+
T Consensus        56 kpk~ILEiGt--~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~~  133 (214)
T d2cl5a1          56 SPSLVLELGA--YCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL  133 (214)
T ss_dssp             CCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCCE
T ss_pred             CCCEEEEEcc--CchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhccccccc
Confidence            4568999996  5566777888876  579999999988777664    34643212211111112222333222  369


Q ss_pred             eEEEeCCCcchH---HHHHHHHHHhccccceE
Q psy14589        182 DADHPGFTDPVY---RARRKYFADLAFNYKHF  210 (655)
Q Consensus       182 DvV~D~vG~~~~---~~l~~~l~~l~~gGrlv  210 (655)
                      |+|+--.....+   ..+..+++.|++||.+|
T Consensus       134 D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         134 DMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             EEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             ceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            987644333321   12445666799999544

>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
domain: Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.28  E-value=0.79  Score=35.80  Aligned_cols=60  Identities=17%  Similarity=0.184  Sum_probs=40.4

Q ss_pred             EEEEEccCCCcchHHHHHHHHHhCCcceeeeec-ccCCCCCcceEEEEEecC--CchHHHHHHHHH
Q psy14589        263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIES-RSSTRIENNYEFMVECAP--GGDLSSVIESLR  325 (655)
Q Consensus       263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeS-RP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~  325 (655)
                      .+++...+ +||-|.++-.+|++++||+..+.. |..+.  +.-.-.++++.  .+.+.+.|+++.
T Consensus         5 ~L~i~~~D-~PGvi~~I~~~l~~~~iNI~~m~~~~~~~g--~~a~~vi~vD~~~~~~vl~~I~~~~   67 (78)
T d1ygya3           5 NLIIHYVD-RPGALGKIGTLLGTAGVNIQAAQLSEDAEG--PGATILLRLDQDVPDDVRTAIAAAV   67 (78)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHHTTCCEEEEEEEECSSS--SCEEEEEEESSCCCHHHHHHHHHHH
T ss_pred             EEEEEeCC-cCCHHHHHHHHHHhcCcChhhheeeecCCC--CeEEEEEEcCCCccHHHHHHHHcCC
Confidence            45555556 999999999999999999998864 43322  23344667776  555444444443

>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=89.22  E-value=0.77  Score=35.29  Aligned_cols=62  Identities=16%  Similarity=0.212  Sum_probs=44.0

Q ss_pred             EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCCcEE
Q psy14589        264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCSYIN  332 (655)
Q Consensus       264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~~v~  332 (655)
                      +.+.+.| +||.|+++..+|++++||+..+...|+... +-.++-+|     .-.++.+.|++..-.++
T Consensus         6 isV~~eN-kpG~L~~v~~~~~~~~inI~sl~v~~t~~~-~i~Riiv~-----~~e~a~~~L~~~g~~v~   67 (70)
T d2f06a2           6 LSIFLEN-KSGRLTEVTEVLAKENINLSALCIAENADF-GILRGIVS-----DPDKAYKALKDNHFAVN   67 (70)
T ss_dssp             EEEEECS-SSSHHHHHHHHHHHTTCCEEEEEEEECSSC-EEEEEEES-----CHHHHHHHHHHTTCCEE
T ss_pred             EEEEEeC-CCcHHHHHHHHHHHCCCCEEEEEEeecCCC-CEEEEEEC-----ChHHHHHHHHHCCCEEe
Confidence            3444677 999999999999999999999988886543 34444332     33566777776654443

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.18  E-value=0.59  Score=47.49  Aligned_cols=92  Identities=7%  Similarity=-0.131  Sum_probs=60.8

Q ss_pred             CchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcE--------EEeCCc---cchhHHHHHHHhcCCCeeEE
Q psy14589        121 RGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADY--------VVDHTI---RELDRFANQILSYGSELDAD  184 (655)
Q Consensus       121 GgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~--------vId~~~---~~~~d~~~~i~~~~~gvDvV  184 (655)
                      ++.|..+++.|+..|+ +|++.|.+++..+.+++    .|.+.        ..+...   ....|....+.+....+|+|
T Consensus        54 sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~fDvI  133 (375)
T d2dula1          54 SATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFI  133 (375)
T ss_dssp             CTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEE
T ss_pred             CCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHhhcCcCCcc
Confidence            6778888999998888 89999999988877753    22211        111110   00013344444445579964


Q ss_pred             -EeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        185 -HPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       185 -~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                       +|.-|++. .-++.++++++.||-|.+..
T Consensus       134 DiDPfGs~~-pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         134 DLDPFGSPM-EFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             EECCSSCCH-HHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCCCCcH-HHHHHHHHHhccCCEEEEEe
Confidence             89999872 12899999999988777663

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.17  E-value=0.17  Score=48.94  Aligned_cols=45  Identities=16%  Similarity=0.127  Sum_probs=35.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhCCC
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGLGA  156 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~LGA  156 (655)
                      ++|||+||+|-||..++......|.+|+++++...  +.+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc
Confidence            47999999999999999877778999999987542  2344555554

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=88.92  E-value=0.19  Score=46.84  Aligned_cols=36  Identities=25%  Similarity=0.381  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      +..++|+|.|| |..|++++..++..|.+|++.++++
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            56789999999 9999999888888899999998754

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.91  E-value=0.081  Score=48.95  Aligned_cols=82  Identities=7%  Similarity=-0.162  Sum_probs=47.6

Q ss_pred             ccccchhHhhhhhhHHHhCCCCCC--CCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhH-HHHHHHHhh
Q psy14589         29 PTHACKEHNHVFPLLIQNCGYAED--NIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVF-HSTQYIRHP  102 (655)
Q Consensus        29 ~~~aC~~~~~G~~~l~~~~~y~~~--~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a-~~TA~~aL~  102 (655)
                      ....|..|..|..++|.+......  ...+...    -.....+.+++..   .++++++++ .|++.++ ..|||+++.
T Consensus        99 ~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~----~Ggfaey~~v~~~~~~~iP~~l~~e-~Aal~~~~~~ta~~~l~  173 (192)
T d1piwa1          99 SCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVS----QGGYANYVRVHEHFVVPIPENIWVE-TLPVGEAGVHEAFERME  173 (192)
T ss_dssp             CCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBC----CCSSBSEEEEEGGGEEECCTTCCEE-EEESSHHHHHHHHHHHH
T ss_pred             CCCCchhhhcCCccccccccccccccccccccc----ccceeeEEEeehHHeEECCCCCCHH-HHHHHHHHHHHHHHHHH
Confidence            577899999998877766433111  1111100    0011122233332   234566665 4566666 568999985


Q ss_pred             cCCCCCCCCCEEEEE
Q psy14589        103 SKPLYTPEPDTLFII  117 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~  117 (655)
                       .+++ ++|++|+|.
T Consensus       174 -~~~v-k~g~~Vvv~  186 (192)
T d1piwa1         174 -KGDV-RYRFTLVGY  186 (192)
T ss_dssp             -HTCC-SSEEEEECC
T ss_pred             -HhCC-CCCCEEEEE
Confidence             5788 999999985

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=88.79  E-value=0.79  Score=44.06  Aligned_cols=98  Identities=14%  Similarity=-0.019  Sum_probs=64.4

Q ss_pred             CCCCCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589        106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      .+ .++.+||=.|+  |.|..+..+++..  |++|++++.+++-++.+++    .+.+.-+-..+     ..+ + ...+
T Consensus        24 ~~-~~~~~ILDiGc--G~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d-----~~~-~-~~~~   93 (281)
T d2gh1a1          24 KI-TKPVHIVDYGC--GYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD-----ATE-I-ELND   93 (281)
T ss_dssp             CC-CSCCEEEEETC--TTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESC-----TTT-C-CCSS
T ss_pred             cc-CCcCEEEEecC--cCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccc-----ccc-c-cccC
Confidence            45 67789998887  4688888999875  5799999999987777653    45432221111     110 1 1123


Q ss_pred             CeeEEEeCCCcc----hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGFTDP----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~vG~~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+|+|+-.-.-.    ....++.+.+.|++||+++.+-
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            699997543211    1234788999999999998864

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.71  E-value=0.04  Score=50.57  Aligned_cols=84  Identities=8%  Similarity=-0.094  Sum_probs=46.5

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRH  101 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL  101 (655)
                      .+....+.|.+|..|..++|.+..+...  +....      ....+.+++.   ..++++++++++++++.  .+|++++
T Consensus        94 ~~~~~cg~c~~c~~G~~~~c~~~~~~g~--~~~~G------~~aey~~~~~~~~~~lP~~~~~~~aa~~pl--~~a~~a~  163 (185)
T d1pl8a1          94 EPGAPRENDEFCKMGRYNLSPSIFFCAT--PPDDG------NLCRFYKHNAAFCYKLPDNVKPLVTHRFPL--EKALEAF  163 (185)
T ss_dssp             CSEECSSCCHHHHTTCGGGCTTCEETTB--TTBCC------SCBSEEEEEGGGEEECCTTCGGGEEEEEEG--GGHHHHH
T ss_pred             cceeccccchhhccchhchhccceeeec--ccccc------cceEEEEEchHHEEECCCCCCHHHHHHHHH--HHHHHHH
Confidence            4556778899999998877765544210  11100      1122333332   23456777777765543  3344443


Q ss_pred             hcCCCCCCCCCEEEEEcCCCc
Q psy14589        102 PSKPLYTPEPDTLFIIGANRG  122 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGg  122 (655)
                      . ...+ +.|++|+| |+ |+
T Consensus       164 ~-~~~~-~~G~~VlI-g~-GP  180 (185)
T d1pl8a1         164 E-TFKK-GLGLKIML-KC-DP  180 (185)
T ss_dssp             H-HHHT-TCCSEEEE-EC-CT
T ss_pred             H-HhCC-CCCCEEEE-Ee-CC
Confidence            2 2234 68999998 65 54

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.66  E-value=0.44  Score=43.98  Aligned_cols=98  Identities=13%  Similarity=-0.080  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC----CCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL----GADYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L----GAd~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      +++.+||=.|+  |.|..+..+++..+.+|++++.|++-++.|++.    |...+ .....   ++.+ +....+.+|+|
T Consensus        59 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~-~f~~~---d~~~-~~~~~~~fD~I  131 (222)
T d2ex4a1          59 TGTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVR-NYFCC---GLQD-FTPEPDSYDVI  131 (222)
T ss_dssp             CCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEE-EEEEC---CGGG-CCCCSSCEEEE
T ss_pred             CCCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccc-ccccc---cccc-ccccccccccc
Confidence            57789999897  777788888777677999999999888887652    33222 11111   1111 11112378998


Q ss_pred             EeCC-----Ccc-hHHHHHHHHHHhccccceEEEe
Q psy14589        185 HPGF-----TDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       185 ~D~v-----G~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +..-     ..+ ..+.+..+.+.|++||++++.-
T Consensus       132 ~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         132 WIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            7532     221 1134778888999999988764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.57  E-value=0.26  Score=48.01  Aligned_cols=32  Identities=16%  Similarity=0.014  Sum_probs=28.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVG  143 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~  143 (655)
                      ++|||+||+|=||..++......|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57999999999999999888778999999875

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.38  E-value=1.7  Score=43.28  Aligned_cols=133  Identities=11%  Similarity=0.045  Sum_probs=79.6

Q ss_pred             ecCCCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---ChHHHHH
Q psy14589         74 PVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG---CPVGVAK  150 (655)
Q Consensus        74 ~v~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~---s~~k~~~  150 (655)
                      +...+-+.-|+.+-.+...     .....+.+.+ ++++.|. .+.||.-|.++...|+.+|.+++++..   +++|.+.
T Consensus        66 K~E~~nptGSfKdRga~~~-----i~~a~~~g~~-~~~~~vv-~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~  138 (355)
T d1jbqa_          66 KCEFFNAGGSVKDRISLRM-----IEDAERDGTL-KPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDV  138 (355)
T ss_dssp             EEGGGSTTSBTHHHHHHHH-----HHHHHHHTCS-CTTCEEE-EECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHH
T ss_pred             EECCCCCccCHHHHHHHHH-----HHHHHHcCCc-ccCceEE-EecccchhhHHHHHHHhccCCeEEEeeccchHHHHHH
Confidence            3344445556666543221     1112334555 5666544 555599999999999999997655443   3478888


Q ss_pred             HHhCCCcEEEeCCcc-----------------------------chhHH-------HHHH-HhcCCCeeEEEeCCCcc-h
Q psy14589        151 AYGLGADYVVDHTIR-----------------------------ELDRF-------ANQI-LSYGSELDADHPGFTDP-V  192 (655)
Q Consensus       151 a~~LGAd~vId~~~~-----------------------------~~~d~-------~~~i-~~~~~gvDvV~D~vG~~-~  192 (655)
                      ++.+||+.+......                             +..+.       ..++ .+..+.+|.|+-++|+. .
T Consensus       139 i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~  218 (355)
T d1jbqa_         139 LRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGT  218 (355)
T ss_dssp             HHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHH
T ss_pred             HHhcCCeEEEecccccchhhhhhhhHHHHHHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCch
Confidence            999999876521100                             00001       1112 22234689999999887 3


Q ss_pred             HHHHHHHHHHhccccceEEEe
Q psy14589        193 YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       193 ~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ...+...++..+++-+++.+-
T Consensus       219 ~~Gi~~~lk~~~~~~kii~ve  239 (355)
T d1jbqa_         219 ITGIARKLKEKCPGCRIIGVD  239 (355)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHHHHHHhhcCCcceEEeec
Confidence            233566677777788888874

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=88.31  E-value=0.58  Score=46.30  Aligned_cols=96  Identities=21%  Similarity=0.057  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhC------CC-----cEEEeCCccchhHHHHHHHh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGL------GA-----DYVVDHTIRELDRFANQILS  176 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~L------GA-----d~vId~~~~~~~d~~~~i~~  176 (655)
                      +..++|||.|+  |.|..+-.++|... .+|.++..+++-.+.+++.      |+     -+++.      .|..+.+++
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~  147 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER  147 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhh
Confidence            45689999997  44566677777764 4899999998877777642      21     12221      145566666


Q ss_pred             cCCCeeEEE-eC---CCc--c-----hHHHHHHHHHHhccccceEEE
Q psy14589        177 YGSELDADH-PG---FTD--P-----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       177 ~~~gvDvV~-D~---vG~--~-----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ..+.+|+|+ |.   .+.  .     +.+-++.+-++|+++|.+++=
T Consensus       148 ~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            556899986 43   221  1     223367888999999987763

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.28  E-value=0.46  Score=41.39  Aligned_cols=32  Identities=16%  Similarity=0.207  Sum_probs=28.8

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV  142 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~  142 (655)
                      +|.+|||.|| |.+|.--+......||+|++++
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVva   43 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVS   43 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe
Confidence            7999999999 9999999999988999887764

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=88.23  E-value=0.3  Score=46.62  Aligned_cols=99  Identities=14%  Similarity=-0.064  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      ..+.+||=.|+  |+|..+.++++..+.+|.+++.+++-++.|++ +.....+++...   ++.+ ..-..+.+|+|+-.
T Consensus        92 ~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~---d~~~-~~~~~~~fD~I~~~  165 (254)
T d1xtpa_          92 HGTSRALDCGA--GIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA---SMET-ATLPPNTYDLIVIQ  165 (254)
T ss_dssp             CCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES---CGGG-CCCCSSCEEEEEEE
T ss_pred             CCCCeEEEecc--cCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc---cccc-cccCCCccceEEee
Confidence            46778998887  77888888887767799999999988888875 332223332221   1110 00012369998753


Q ss_pred             CCcc--h----HHHHHHHHHHhccccceEEEe
Q psy14589        188 FTDP--V----YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       188 vG~~--~----~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      -.-.  .    -+.+..+.+.|++||++++.-
T Consensus       166 ~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         166 WTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            3222  1    134678888999999988753

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=88.15  E-value=0.53  Score=45.70  Aligned_cols=96  Identities=11%  Similarity=-0.019  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhC-----CC-----cEEEeCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGL-----GA-----DYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~L-----GA-----d~vId~~~~~~~d~~~~i~~~  177 (655)
                      ++.++|||.|+  |-|..+-.+.|..+. +|.+++.+++-.+.+++.     |+     -.++..      |..+.+++.
T Consensus        74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~------D~~~~l~~~  145 (274)
T d1iy9a_          74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAKS  145 (274)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHTC
T ss_pred             CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec------hHHHHHhhc
Confidence            35689999996  445566677777765 899999998877777652     22     122221      344556665


Q ss_pred             CCCeeEEE-eCCC---cc----hHHHHHHHHHHhccccceEEE
Q psy14589        178 GSELDADH-PGFT---DP----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~-D~vG---~~----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      ...+|+|+ |...   .+    +-+-.+.+-++|+++|.++.=
T Consensus       146 ~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence            55899986 3321   11    213367888899999987763

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.04  E-value=0.18  Score=45.11  Aligned_cols=35  Identities=9%  Similarity=0.065  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecCh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCP  145 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~  145 (655)
                      .+++|+|.|| |+.|+.++..++.+|+ .|.+..+++
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            4789999999 9999999999999998 488887754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.69  E-value=0.66  Score=44.15  Aligned_cols=33  Identities=21%  Similarity=0.322  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHH-HHcCCeEEEEec
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVG-KAYGLTVFASVG  143 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlA-k~~Ga~Viat~~  143 (655)
                      +|.+|+|.|. |.||..+++++ +..|++|+++.-
T Consensus        31 ~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          31 KGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            8999999999 99999999865 567999987753

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=87.43  E-value=1.3  Score=39.68  Aligned_cols=96  Identities=15%  Similarity=0.027  Sum_probs=57.1

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcC-CeEEEEec-C-hHHHHHHHhCCCcEEEeCCccchhHHHHH-------HHhcCCCee
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYG-LTVFASVG-C-PVGVAKAYGLGADYVVDHTIRELDRFANQ-------ILSYGSELD  182 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~G-a~Viat~~-s-~~k~~~a~~LGAd~vId~~~~~~~d~~~~-------i~~~~~gvD  182 (655)
                      +|.|+|- |-||.++++++...+ .+|+++.. + ......+...+.+......... ..+.+.       ..+...++|
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~v~g~~~~~~~~vD   80 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERV-KLFEKAGIEVAGTVDDMLDEAD   80 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGH-HHHHHTTCCCCEEHHHHHHTCS
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccc-eeecccCcccCCChhHhhcCCC
Confidence            6899998 999999999876665 46665532 2 2344556677766544322210 001100       000012799


Q ss_pred             EEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        183 ADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       183 vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      +|+||+|.-.  ..+.+-..+..|-+.|+.
T Consensus        81 vViEcTG~f~--~~~~~~~hl~~G~K~vi~  108 (171)
T d1cf2o1          81 IVIDCTPEGI--GAKNLKMYKEKGIKAIFQ  108 (171)
T ss_dssp             EEEECCSTTH--HHHHHHHHHHTTCEEEEC
T ss_pred             EEEEccCCCC--CHHHHHHHHHcCCCEEEE
Confidence            9999999872  145555667777676654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.31  E-value=0.42  Score=43.76  Aligned_cols=39  Identities=28%  Similarity=0.191  Sum_probs=34.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA  151 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a  151 (655)
                      ++|.|.|+ |-+|...++++...|.+|+..+++++.++.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            57999999 9999999999989999999999998776655

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=87.13  E-value=0.24  Score=45.47  Aligned_cols=85  Identities=11%  Similarity=-0.051  Sum_probs=55.9

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC------cEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA------DYVVDHTIRELDRFANQILSYGSELDADH  185 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA------d~vId~~~~~~~d~~~~i~~~~~gvDvV~  185 (655)
                      .+|.|.|+ |..|.+...++...|-+|...+++++..+.+.+-+-      +..+...-....++.+.+.    +.|+++
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~----~ad~ii   82 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN----GAEIIL   82 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT----TCSCEE
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC----CCCEEE
Confidence            47999999 999999888887778899999999888877743221      1111100000013444443    579999


Q ss_pred             eCCCcchHHHHHHHHHHhc
Q psy14589        186 PGFTDPVYRARRKYFADLA  204 (655)
Q Consensus       186 D~vG~~~~~~l~~~l~~l~  204 (655)
                      -++....   ++..++.++
T Consensus        83 iavPs~~---~~~~~~~~~   98 (189)
T d1n1ea2          83 FVIPTQF---LRGFFEKSG   98 (189)
T ss_dssp             ECSCHHH---HHHHHHHHC
T ss_pred             EcCcHHH---HHHHHHHHH
Confidence            9998886   666666554

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.05  E-value=1.3  Score=38.52  Aligned_cols=69  Identities=9%  Similarity=0.015  Sum_probs=42.5

Q ss_pred             CCCEEE-EEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH----hCCCcE-EEeCCccchhHHHHHHHhcCCCee
Q psy14589        110 EPDTLF-IIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY----GLGADY-VVDHTIRELDRFANQILSYGSELD  182 (655)
Q Consensus       110 ~Gd~VL-I~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~----~LGAd~-vId~~~~~~~d~~~~i~~~~~gvD  182 (655)
                      .|.+|| +..|+|++|.   ..+ .+|| +|++++.+++..+.++    .+|... +--...    |..+.+....+.+|
T Consensus        14 ~g~~vlDl~~GtG~~~i---ea~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~----D~~~~l~~~~~~fD   85 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAI---EAV-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM----EAERAIDCLTGRFD   85 (152)
T ss_dssp             CSCEEEEETCTTCHHHH---HHH-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS----CHHHHHHHBCSCEE
T ss_pred             CCCeEEEcCCccCHHHH---HHH-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc----cccccccccccccc
Confidence            688888 5445555555   333 4687 8999999987766553    466532 211122    34445555556899


Q ss_pred             EEEe
Q psy14589        183 ADHP  186 (655)
Q Consensus       183 vV~D  186 (655)
                      +|+=
T Consensus        86 iIf~   89 (152)
T d2esra1          86 LVFL   89 (152)
T ss_dssp             EEEE
T ss_pred             eeEe
Confidence            9874

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=87.04  E-value=0.9  Score=44.92  Aligned_cols=102  Identities=15%  Similarity=-0.006  Sum_probs=61.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCc--EEEeCCccc--hhHHHHHHHhcCCCeeE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGAD--YVVDHTIRE--LDRFANQILSYGSELDA  183 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd--~vId~~~~~--~~d~~~~i~~~~~gvDv  183 (655)
                      +..++|||.|+  |-|..+-.++|.... +|.++..+++-.+.+++.-..  ...+..+-.  ..|..+.+++....+|+
T Consensus       105 ~~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred             CCCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCE
Confidence            45678999996  445566677787764 899999998888887763110  001111000  01455667665568999


Q ss_pred             EEeC----CCcc----hHHHHHHHHHHhccccceEEE
Q psy14589        184 DHPG----FTDP----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       184 V~D~----vG~~----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      |+--    .|.+    +-+-++.+-++|+++|.++.=
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q  219 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ  219 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEe
Confidence            8732    2221    112256777899999988774

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.03  E-value=0.17  Score=44.20  Aligned_cols=82  Identities=6%  Similarity=-0.174  Sum_probs=50.7

Q ss_pred             EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchH
Q psy14589        114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVY  193 (655)
Q Consensus       114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~  193 (655)
                      |-+.|+ |.+|...++..+..+..+.+..|+++|.+.+.+.++....+..+            .....|+|+-|+..+. 
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~------------~~~~~DiVil~v~d~~-   67 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEK------------HPELNGVVFVIVPDRY-   67 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCC------------CCC---CEEECSCTTT-
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhh------------hhccCcEEEEeccchh-
Confidence            346788 99998877655443323346789999988887655543322211            1225799999998777 


Q ss_pred             HHHHHHHHHhccccceEE
Q psy14589        194 RARRKYFADLAFNYKHFF  211 (655)
Q Consensus       194 ~~l~~~l~~l~~gGrlv~  211 (655)
                        +...++.++..|+++.
T Consensus        68 --i~~v~~~l~~~~~ivi   83 (153)
T d2i76a2          68 --IKTVANHLNLGDAVLV   83 (153)
T ss_dssp             --HHHHHTTTCCSSCCEE
T ss_pred             --hhHHHhhhcccceeee
Confidence              7788888876676655

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=86.97  E-value=0.66  Score=41.41  Aligned_cols=43  Identities=21%  Similarity=0.070  Sum_probs=35.7

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA  156 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA  156 (655)
                      .|.|.|. |.+|...+.-....|.+|++.+++++|.+.+.+.++
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTT
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcc
Confidence            4889999 999987766555679999999999999988876654

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.80  E-value=0.69  Score=45.13  Aligned_cols=96  Identities=13%  Similarity=-0.047  Sum_probs=61.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCC----------CcEEEeCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLG----------ADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LG----------Ad~vId~~~~~~~d~~~~i~~~  177 (655)
                      +..++|||.|+  |-|..+-.+.|..+. +|.++..+++-.+.+++.-          -.+++.      .|..+.+++.
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~------~Da~~~l~~~  148 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQN  148 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHTC
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE------ccHHHHHhcC
Confidence            46689999996  445566677777655 8999999988777776521          112221      1445566655


Q ss_pred             CCCeeEEE-eCCCc---c----hHHHHHHHHHHhccccceEEE
Q psy14589        178 GSELDADH-PGFTD---P----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~-D~vG~---~----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+|+|+ |....   .    +.+-++.+-++|+++|.++.=
T Consensus       149 ~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q  191 (285)
T d2o07a1         149 QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ  191 (285)
T ss_dssp             SSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEe
Confidence            55899976 43321   1    113367778899999988764

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=86.78  E-value=1.4  Score=40.54  Aligned_cols=97  Identities=15%  Similarity=0.069  Sum_probs=61.3

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH----HhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEE
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA----YGLGADYVV-DHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a----~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      +-.||=.|+  |.|..++.+|+.. ++.+++++.++..+..+    ++.|.+.|- -..+.  .++.+...  .+.+|.|
T Consensus        30 ~PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da--~~l~~~~~--~~~~d~v  103 (204)
T d2fcaa1          30 NPIHIEVGT--GKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA--DTLTDVFE--PGEVKRV  103 (204)
T ss_dssp             CCEEEEECC--TTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG--GGHHHHCC--TTSCCEE
T ss_pred             CceEEEEEe--cCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccch--hhhhcccC--chhhhcc
Confidence            346787787  7788889999986 67999999998776554    457776542 22221  12322111  2256766


Q ss_pred             EeCCCcch------------HHHHHHHHHHhccccceEEEe
Q psy14589        185 HPGFTDPV------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       185 ~D~vG~~~------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +-....+.            .+.++...+.|++||.+++..
T Consensus       104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~T  144 (204)
T d2fcaa1         104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT  144 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred             ccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEEE
Confidence            53332220            134788889999999998764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.51  E-value=0.38  Score=43.24  Aligned_cols=40  Identities=13%  Similarity=0.042  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA  151 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a  151 (655)
                      +|++|+|.|+ ||++.+++..++..| +|....|+.+|.+.+
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHH
Confidence            8999999999 999998876654445 898999998887654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=86.44  E-value=2.3  Score=37.36  Aligned_cols=97  Identities=13%  Similarity=0.166  Sum_probs=62.1

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChH--HH-HHHHhCCCcEEEeCCccchhHHHHHHH-----------
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPV--GV-AKAYGLGADYVVDHTIRELDRFANQIL-----------  175 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~--k~-~~a~~LGAd~vId~~~~~~~d~~~~i~-----------  175 (655)
                      ++|.|.|++|.||.-++.+.+..  ..+|++.+....  ++ +.++++....++-..+....++.+.+.           
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            46999999999999999999887  358877665432  22 234667777776544321111222221           


Q ss_pred             -----hc-C-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589        176 -----SY-G-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       176 -----~~-~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                           +. . ..+|+|+.+..|- .   +...+.+++.| +-+.+
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aG---L~~t~~aik~g-k~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAG---LLPTLAAIRAG-KTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGG---HHHHHHHHHTT-CEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccH---HHHHHHHHhcC-CeEEE
Confidence                 11 1 2689999988665 6   88888888765 44443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=86.41  E-value=0.28  Score=45.20  Aligned_cols=33  Identities=33%  Similarity=0.254  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC
Q psy14589        111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC  144 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s  144 (655)
                      |++|+|.|| |.-|++++..++..|.+|.++..+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            678999999 999999998888889999999764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=86.35  E-value=0.51  Score=43.60  Aligned_cols=71  Identities=15%  Similarity=0.032  Sum_probs=47.2

Q ss_pred             hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589        102 PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       102 ~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      ...+++  +|++||=.|++  .|.+++.++ .+|+ +|++++.+++.++.+++ ...-.++...-          .+..+
T Consensus        42 ~~~~dl--~Gk~VLDlGcG--tG~l~i~a~-~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~----------~~l~~  106 (197)
T d1ne2a_          42 YNDGNI--GGRSVIDAGTG--NGILACGSY-LLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV----------SEISG  106 (197)
T ss_dssp             HHHTSS--BTSEEEEETCT--TCHHHHHHH-HTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG----------GGCCC
T ss_pred             HHcCCC--CCCEEEEeCCC--CcHHHHHHH-HcCCCcccccccCHHHHHHHHHccccccEEEEeh----------hhcCC
Confidence            344777  89999988983  355555444 4676 79999999988888875 33334443221          22345


Q ss_pred             CeeEEEeC
Q psy14589        180 ELDADHPG  187 (655)
Q Consensus       180 gvDvV~D~  187 (655)
                      .+|+|+-.
T Consensus       107 ~fD~Vi~N  114 (197)
T d1ne2a_         107 KYDTWIMN  114 (197)
T ss_dssp             CEEEEEEC
T ss_pred             cceEEEeC
Confidence            79999854

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.30  E-value=0.92  Score=40.97  Aligned_cols=95  Identities=9%  Similarity=0.008  Sum_probs=54.7

Q ss_pred             CCCEEE-EEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhcCCC
Q psy14589        110 EPDTLF-IIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       110 ~Gd~VL-I~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      +|.+|| +..++|++|+-|+    .+|| +|+.++.+++..+.+++    ++..   .++....   .++.+.....+..
T Consensus        41 ~~~~vLDlfaGsG~~g~ea~----srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~---~~~l~~~~~~~~~  113 (182)
T d2fhpa1          41 DGGMALDLYSGSGGLAIEAV----SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA---NRALEQFYEEKLQ  113 (182)
T ss_dssp             SSCEEEETTCTTCHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH---HHHHHHHHHTTCC
T ss_pred             CCCEEEEcccccccccceee----ecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc---hhhhhhhcccCCC
Confidence            788888 6666777776432    4788 79999999887777643    4543   2333221   1233333333447


Q ss_pred             eeEEEeCCC--cc-hHHHHHHHHH--HhccccceEE
Q psy14589        181 LDADHPGFT--DP-VYRARRKYFA--DLAFNYKHFF  211 (655)
Q Consensus       181 vDvV~D~vG--~~-~~~~l~~~l~--~l~~gGrlv~  211 (655)
                      +|+|+=.-.  .. ..+.++...+  .|+++|.+|+
T Consensus       114 fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~giIi~  149 (182)
T d2fhpa1         114 FDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVC  149 (182)
T ss_dssp             EEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cceEEechhhhhhHHHHHHHHHHHCCCCCCCEEEEE
Confidence            999874432  12 2123444443  3777775553

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.23  E-value=1.2  Score=42.22  Aligned_cols=108  Identities=14%  Similarity=0.055  Sum_probs=60.3

Q ss_pred             cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHc-----C--CeEEEEecChHHHHHHHhC--C----CcEEEeCCccchhH
Q psy14589        103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAY-----G--LTVFASVGCPVGVAKAYGL--G----ADYVVDHTIRELDR  169 (655)
Q Consensus       103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-----G--a~Viat~~s~~k~~~a~~L--G----Ad~vId~~~~~~~d  169 (655)
                      ..+.. +++-+||=.|+  |.|.++..+++..     +  .++++++.++.-++.+++.  +    ....++......++
T Consensus        34 ~l~~~-~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~  110 (280)
T d1jqea_          34 RIGDT-KSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSE  110 (280)
T ss_dssp             TTTTT-CSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHH
T ss_pred             HhccC-CCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhh
Confidence            33444 45557898887  4455555555432     3  3678999988877776541  1    11122222221112


Q ss_pred             HHHHHHhc--CCCeeEEEeCCCc----chHHHHHHHHHHhccccceEEEe
Q psy14589        170 FANQILSY--GSELDADHPGFTD----PVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       170 ~~~~i~~~--~~gvDvV~D~vG~----~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.......  .+.+|+|+-.-.-    +....+..+.++|++||.++++.
T Consensus       111 ~~~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~  160 (280)
T d1jqea_         111 YQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV  160 (280)
T ss_dssp             HHHHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hcchhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEE
Confidence            22222222  2379998753221    12245888999999999988875

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=86.20  E-value=0.25  Score=45.71  Aligned_cols=35  Identities=29%  Similarity=0.363  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      .|.+|.|.|. |.||..++++++..|++|++.++..
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            6889999999 9999999999999999999998754

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.11  E-value=0.7  Score=45.37  Aligned_cols=96  Identities=15%  Similarity=0.053  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCC-----C-----cEEEeCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLG-----A-----DYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LG-----A-----d~vId~~~~~~~d~~~~i~~~  177 (655)
                      +..++|||.|++  -|..+-.++|..+. +|.+++.+++-.+.+++.-     +     -.++.      .|..+.+++.
T Consensus        88 ~~pk~VLiiGgG--~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~~  159 (295)
T d1inla_          88 PNPKKVLIIGGG--DGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRKF  159 (295)
T ss_dssp             SSCCEEEEEECT--TCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGGC
T ss_pred             CCCceEEEecCC--chHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh------hhHHHHHhcC
Confidence            356799999973  34456677777654 8999999988777776521     1     12221      1455666665


Q ss_pred             CCCeeEEE-eCC----Ccc----hHHHHHHHHHHhccccceEEE
Q psy14589        178 GSELDADH-PGF----TDP----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~gvDvV~-D~v----G~~----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+.+|+|+ |+.    +..    +.+-++.+-++|+++|.++.=
T Consensus       160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q  203 (295)
T d1inla_         160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE  203 (295)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEe
Confidence            55899986 332    111    224467888899999988763

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=86.01  E-value=0.38  Score=43.84  Aligned_cols=84  Identities=13%  Similarity=0.033  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      .|++|.|.|. |.||...+++++.+|++|++.++++..       +.....   .    ++.+.+.    ..|+|+-++.
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~-------~~~~~~---~----~l~ell~----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE-------GPWRFT---N----SLEEALR----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC-------SSSCCB---S----CSHHHHT----TCSEEEECCC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc-------cceeee---e----chhhhhh----ccchhhcccc
Confidence            6899999999 999999999999999999999876431       111111   1    2222222    4688776664


Q ss_pred             cc--hHHH-HHHHHHHhccccceEEE
Q psy14589        190 DP--VYRA-RRKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~--~~~~-l~~~l~~l~~gGrlv~v  212 (655)
                      ..  +... -.+.++.|+++..+|-+
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~  127 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNV  127 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEEC
T ss_pred             cccccccccccceeeeccccceEEec
Confidence            32  1000 14666777776665554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.70  E-value=2.1  Score=38.13  Aligned_cols=81  Identities=11%  Similarity=-0.078  Sum_probs=51.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhC------CC---cEEEeCCccchhHHHHHHHhcCCCe
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGL------GA---DYVVDHTIRELDRFANQILSYGSEL  181 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~L------GA---d~vId~~~~~~~d~~~~i~~~~~gv  181 (655)
                      +|.|.|+ |..|.+.+..+...|-+|....+..+  ..+...+-      +.   ...+...    +++.+.+.    +.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~----~a   72 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWP----EQLEKCLE----NA   72 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECG----GGHHHHHT----TC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhcccccccc----ccHHHHHh----cc
Confidence            6899999 99999888877777889988876433  33333221      11   1112111    14444443    57


Q ss_pred             eEEEeCCCcchHHHHHHHHHHhcc
Q psy14589        182 DADHPGFTDPVYRARRKYFADLAF  205 (655)
Q Consensus       182 DvV~D~vG~~~~~~l~~~l~~l~~  205 (655)
                      |+|+-++....   ++..++.+++
T Consensus        73 d~Ii~avps~~---~~~~~~~l~~   93 (180)
T d1txga2          73 EVVLLGVSTDG---VLPVMSRILP   93 (180)
T ss_dssp             SEEEECSCGGG---HHHHHHHHTT
T ss_pred             chhhcccchhh---hHHHHHhhcc
Confidence            99999999887   6666665544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.66  E-value=0.53  Score=46.00  Aligned_cols=34  Identities=15%  Similarity=0.105  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG  143 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~  143 (655)
                      ..++|||+||+|-||+.++......|.+|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4578999999999999999988889999999875

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.62  E-value=1.2  Score=39.82  Aligned_cols=85  Identities=9%  Similarity=-0.027  Sum_probs=55.8

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEE-ecChHHHHH-HHhCCC---cEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY-GLTVFAS-VGCPVGVAK-AYGLGA---DYVVDHTIRELDRFANQILSYGSELDADHP  186 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~-Ga~Viat-~~s~~k~~~-a~~LGA---d~vId~~~~~~~d~~~~i~~~~~gvDvV~D  186 (655)
                      +|.|.|+ |.+|...++..+.. +++|+++ ++++++.+. +++.+.   ..+.+       ++.+.+..  ..+|+|+-
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ll~~--~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG-------SYESLLED--PEIDALYV   72 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES-------SHHHHHHC--TTCCEEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC-------cHHHhhhc--cccceeee
Confidence            5889998 99999888877776 6787765 556665544 355553   22322       34333332  26899999


Q ss_pred             CCCcc-hHHHHHHHHHHhccccceEE
Q psy14589        187 GFTDP-VYRARRKYFADLAFNYKHFF  211 (655)
Q Consensus       187 ~vG~~-~~~~l~~~l~~l~~gGrlv~  211 (655)
                      ++... .   .+.+..+++. |+-|+
T Consensus        73 ~tp~~~h---~~~~~~~l~~-g~~v~   94 (184)
T d1ydwa1          73 PLPTSLH---VEWAIKAAEK-GKHIL   94 (184)
T ss_dssp             CCCGGGH---HHHHHHHHTT-TCEEE
T ss_pred             cccchhh---cchhhhhhhc-cceee
Confidence            88777 4   6777777775 56554

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.52  E-value=0.72  Score=45.11  Aligned_cols=96  Identities=13%  Similarity=-0.019  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCC----------CcEEEeCCccchhHHHHHHHhc
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLG----------ADYVVDHTIRELDRFANQILSY  177 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LG----------Ad~vId~~~~~~~d~~~~i~~~  177 (655)
                      +..++|||.|+  |-|..+-.++|..+. +|.+++.+++-.+.+++.-          --.++.      .|..+.+++.
T Consensus        79 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~  150 (290)
T d1xj5a_          79 PNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNA  150 (290)
T ss_dssp             SCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTS
T ss_pred             CCCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhc
Confidence            45679999996  445566677887775 7999999988877776521          112221      1345566665


Q ss_pred             CC-CeeEEE-eCCC---cc----hHHHHHHHHHHhccccceEEE
Q psy14589        178 GS-ELDADH-PGFT---DP----VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       178 ~~-gvDvV~-D~vG---~~----~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+ .+|+|+ |+..   .+    +-+-++.+-++|+++|.++.=
T Consensus       151 ~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q  194 (290)
T d1xj5a_         151 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  194 (290)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEe
Confidence            43 799876 4432   11    223367888899999988874

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.42  E-value=2.7  Score=40.55  Aligned_cols=32  Identities=9%  Similarity=0.031  Sum_probs=28.7

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEec
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVG  143 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~  143 (655)
                      ++|||+||+|=||..++..+...|.+|+++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            68999999999999999888888999999863

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=85.14  E-value=0.85  Score=41.11  Aligned_cols=89  Identities=12%  Similarity=-0.101  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      ++.+||=.|++  .|..+.++     .++++++.|++-++.+++-+...+.....    ++    .-..+.+|+|+..-.
T Consensus        36 ~~~~vLDiGcG--~G~~~~~~-----~~~~giD~s~~~~~~a~~~~~~~~~~d~~----~l----~~~~~~fD~I~~~~~  100 (208)
T d1vlma_          36 PEGRGVEIGVG--TGRFAVPL-----KIKIGVEPSERMAEIARKRGVFVLKGTAE----NL----PLKDESFDFALMVTT  100 (208)
T ss_dssp             CSSCEEEETCT--TSTTHHHH-----TCCEEEESCHHHHHHHHHTTCEEEECBTT----BC----CSCTTCEEEEEEESC
T ss_pred             CCCeEEEECCC--Cccccccc-----ceEEEEeCChhhccccccccccccccccc----cc----ccccccccccccccc
Confidence            56689988983  45555555     35789999999999998876544332111    11    011236899875322


Q ss_pred             cc----hHHHHHHHHHHhccccceEEEe
Q psy14589        190 DP----VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       190 ~~----~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      -.    ....++...++|++||++++..
T Consensus       101 l~h~~d~~~~l~~~~~~L~pgG~l~i~~  128 (208)
T d1vlma_         101 ICFVDDPERALKEAYRILKKGGYLIVGI  128 (208)
T ss_dssp             GGGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccchhhhhhcCCCCceEEEEe
Confidence            21    1234788899999999988875

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=85.00  E-value=0.38  Score=44.62  Aligned_cols=93  Identities=12%  Similarity=0.020  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc--EEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD--YVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd--~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +|++||=.|+  |.|..+..+++ .|.+|++++.+++..+.+++...+  .++...-   ++.     ...+.+|+|+-.
T Consensus        20 ~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~---~~~-----~~~~~fD~I~~~   88 (225)
T d2p7ia1          20 RPGNLLELGS--FKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRF---EDA-----QLPRRYDNIVLT   88 (225)
T ss_dssp             CSSCEEEESC--TTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCG---GGC-----CCSSCEEEEEEE
T ss_pred             CCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhcccccccccccccc---ccc-----cccccccccccc
Confidence            5778998887  56777777765 588999999999988888753322  2232111   111     112379998732


Q ss_pred             CCcc----hHHHHHHHH-HHhccccceEEEe
Q psy14589        188 FTDP----VYRARRKYF-ADLAFNYKHFFFF  213 (655)
Q Consensus       188 vG~~----~~~~l~~~l-~~l~~gGrlv~v~  213 (655)
                      --=.    ....+.... ++|++||++++..
T Consensus        89 ~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~~  119 (225)
T d2p7ia1          89 HVLEHIDDPVALLKRINDDWLAEGGRLFLVC  119 (225)
T ss_dssp             SCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ceeEecCCHHHHHHHHHHHhcCCCceEEEEe
Confidence            1111    112244555 5789999998864

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=84.90  E-value=0.11  Score=48.05  Aligned_cols=91  Identities=11%  Similarity=-0.032  Sum_probs=55.7

Q ss_pred             ccccccccchhHhhhhhhHHHhCCC------CCCCCCCcc----cccccccccCCcE---EeecC---CCCCCCCHHhHh
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGY------AEDNIPQLE----DISKFLKDSTGFS---LRPVA---GLLSSRDFLAGL   88 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y------~~~~iP~le----~V~~~l~~~~g~~---~~~v~---~l~~~~s~~eAA   88 (655)
                      .+......|..|..|...+|++...      ..+.-+...    .+... ...+||+   +++..   .++++++++++|
T Consensus        91 ~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~-~g~GgfAey~vvp~~~~~~vp~~l~~~~aa  169 (197)
T d2fzwa1          91 LYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHY-MGTSTFSEYTVVADISVAKIDPLIKVDEFV  169 (197)
T ss_dssp             CSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCC-TTTCCSBSEEEEEGGGEEECCTTSCSGGGE
T ss_pred             ccccccccccccccCccccCccccccccccccCCccceeccCCcceecc-cccccceeEEEechHHEEECCCCCCHHHHh
Confidence            5567778899999997766654221      122111111    11111 1123444   44433   345778889999


Q ss_pred             hhhhHHHHHHHHhhcCCCCCCCCCEEEEE
Q psy14589         89 AFRVFHSTQYIRHPSKPLYTPEPDTLFII  117 (655)
Q Consensus        89 al~~a~~TA~~aL~~~~~l~~~Gd~VLI~  117 (655)
                      ++++++.|++.++.+...- +.+++|+|+
T Consensus       170 ~~~~~~~t~~~a~~~~~~g-~~~~tvvvi  197 (197)
T d2fzwa1         170 THNLSFDEINKAFELMHSG-KSIRTVVKI  197 (197)
T ss_dssp             EEEEEGGGHHHHHHHHHHT-CCSEEEEEC
T ss_pred             hhhhHHHHHHHHHHhccCC-CcCCEEEeC
Confidence            9999999999998554444 578999984

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.68  E-value=1.1  Score=39.07  Aligned_cols=70  Identities=14%  Similarity=-0.042  Sum_probs=45.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhC--C-C---cEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGL--G-A---DYVVDHTIRELDRFANQILSYGSELDAD  184 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~L--G-A---d~vId~~~~~~~d~~~~i~~~~~gvDvV  184 (655)
                      +|.|.||+|.||..++.+.+..|.  +++..+..+.+.+ +..+  . +   ...+...    .+..+.++    +.|+|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a~Dl~~~~~~~~~~~~~~~----~~~~~~~~----~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSHIETRATVKGYLGP----EQLPDCLK----GCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-HHHHTTSSSSCEEEEEESG----GGHHHHHT----TCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-hHHHhhhhhhcCCCeEEcC----CChHHHhC----CCCEE
Confidence            689999889999999998888886  6888887665533 3221  1 1   1111111    13444443    68999


Q ss_pred             EeCCCcc
Q psy14589        185 HPGFTDP  191 (655)
Q Consensus       185 ~D~vG~~  191 (655)
                      +-+.|.+
T Consensus        73 Vitag~~   79 (144)
T d1mlda1          73 VIPAGVP   79 (144)
T ss_dssp             EECCSCC
T ss_pred             EECCCcC
Confidence            9998854

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=84.51  E-value=0.75  Score=41.75  Aligned_cols=91  Identities=12%  Similarity=0.025  Sum_probs=52.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEec-Ch-HHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-----------
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY-GLTVFASVG-CP-VGVAKAYGLGADYVVDHTIRELDRFANQILSYG-----------  178 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~-s~-~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-----------  178 (655)
                      +|.|.|- |-||...++.+... +.+|+++.. ++ .....+...+........     . .....+..           
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~i~v~g~~~~~~   75 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQ-----S-IKKFEESGIPVAGTVEDLI   75 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGG-----G-HHHHHTTTCCCCCCHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCc-----c-ceeccccceecCCchhhhh
Confidence            6899997 99999999988876 458877643 22 233334444433322111     1 11111110           


Q ss_pred             CCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589        179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .++|+|+||+|...  ..+.+-..++.|-++|+.
T Consensus        76 ~~vDiViecTG~f~--~~e~a~~hl~~G~KvIi~  107 (178)
T d1b7go1          76 KTSDIVVDTTPNGV--GAQYKPIYLQLQRNAIFQ  107 (178)
T ss_dssp             HHCSEEEECCSTTH--HHHHHHHHHHTTCEEEEC
T ss_pred             hcCCEEEECCCCcC--CHHHHHHHHHcCCEEEEE
Confidence            16899999999873  145555566555455543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=84.33  E-value=0.32  Score=38.44  Aligned_cols=34  Identities=18%  Similarity=0.232  Sum_probs=30.4

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV  146 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~  146 (655)
                      ++|.|.|+ |=+|.|.++-|+.+|.+|++.+.+++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            47999999 99999999999999999999986543

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.21  E-value=2.6  Score=40.54  Aligned_cols=95  Identities=13%  Similarity=-0.049  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC-CC---------------cEEEeCCccchhHHHH
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL-GA---------------DYVVDHTIRELDRFAN  172 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L-GA---------------d~vId~~~~~~~d~~~  172 (655)
                      ++.++|||.|++  -|..+-.+++.-..+|.+++.+++-.+.+++. +.               -+++..      |..+
T Consensus        71 ~~p~~vLiiG~G--~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~------Da~~  142 (276)
T d1mjfa_          71 PKPKRVLVIGGG--DGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG------DGFE  142 (276)
T ss_dssp             SCCCEEEEEECT--TSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES------CHHH
T ss_pred             CCCceEEEecCC--chHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC------hHHH
Confidence            467899999973  34455555665444899999998877777652 11               123321      3344


Q ss_pred             HHHhcCCCeeEEE-eCCCcc-------hHHHHHHHHHHhccccceEEE
Q psy14589        173 QILSYGSELDADH-PGFTDP-------VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       173 ~i~~~~~gvDvV~-D~vG~~-------~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .+++ .+.+|+|+ |+....       +.+-++.+-++|+++|.++.=
T Consensus       143 ~l~~-~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q  189 (276)
T d1mjfa_         143 FIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  189 (276)
T ss_dssp             HHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHhc-cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEe
Confidence            4544 35799975 444321       123367788899999987764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=84.07  E-value=2.2  Score=38.09  Aligned_cols=94  Identities=15%  Similarity=-0.019  Sum_probs=56.0

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecC--hHHHHHHHhC----C---CcE-------EEeC-----CccchhHHH
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGC--PVGVAKAYGL----G---ADY-------VVDH-----TIRELDRFA  171 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s--~~k~~~a~~L----G---Ad~-------vId~-----~~~~~~d~~  171 (655)
                      +|.|+|- |-||.++.+++...+.+|+++--.  .+....+.+.    |   .+.       ++|-     ....  + .
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~--~-p   77 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVK--D-P   77 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCS--S-G
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecC--C-h
Confidence            6899999 999999999888888887766432  2333334332    2   110       0110     0000  0 0


Q ss_pred             HHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        172 NQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       172 ~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      +.+.....++|+|+||+|.- +   .+.+-..++.|.+=|++.
T Consensus        78 ~~i~W~~~gvdiViEcTG~f~~---~~~~~~hl~~gakkViiS  117 (168)
T d2g82a1          78 KEIPWAEAGVGVVIESTGVFTD---ADKAKAHLEGGAKKVIIT  117 (168)
T ss_dssp             GGCCTGGGTEEEEEECSSSCCB---HHHHTHHHHTTCSEEEES
T ss_pred             HHCcccccCCceeEeccccccc---hHHhhhhhccccceeeec
Confidence            11111112799999999987 5   567777787777666653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.01  E-value=0.42  Score=46.58  Aligned_cols=33  Identities=18%  Similarity=0.172  Sum_probs=29.4

Q ss_pred             EE-EEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        113 TL-FIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       113 ~V-LI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      +| ||+||+|=||..++......|.+|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            57 9999999999999998888899999999853

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=83.81  E-value=0.77  Score=43.63  Aligned_cols=99  Identities=14%  Similarity=0.015  Sum_probs=59.6

Q ss_pred             CCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589        105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQILSYGS  179 (655)
Q Consensus       105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i~~~~~  179 (655)
                      -++ ....+||=.|+  |.|..++.++++. +.++++++. ++-.+.+    .+.|....+.....   +..   .....
T Consensus        77 ~d~-~~~~~vlDvG~--G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~---d~~---~~~p~  146 (256)
T d1qzza2          77 YDW-SAVRHVLDVGG--GNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG---DFF---KPLPV  146 (256)
T ss_dssp             SCC-TTCCEEEEETC--TTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC---CTT---SCCSC
T ss_pred             CCC-ccCCEEEEECC--CCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee---ecc---ccccc
Confidence            345 56678887785  7788999999987 779999986 5544443    33443211111111   111   11223


Q ss_pred             CeeEEEeCC-----Ccc-hHHHHHHHHHHhccccceEEEe
Q psy14589        180 ELDADHPGF-----TDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       180 gvDvV~D~v-----G~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      ++|+|+-.-     +.+ .-..++.+.++|+|||+++++-
T Consensus       147 ~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d  186 (256)
T d1qzza2         147 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD  186 (256)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEE
Confidence            689876321     111 1134678889999999999875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=83.80  E-value=0.5  Score=42.95  Aligned_cols=36  Identities=25%  Similarity=0.182  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      ..+++|+|.|| |+.|+.|+..++.+|.+|+.....+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            46789999999 9999999999999999999998754

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=83.78  E-value=0.14  Score=47.38  Aligned_cols=89  Identities=10%  Similarity=-0.040  Sum_probs=55.4

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCC-C---------CCCcc----cccccccccCCc---EEeecC---CCCCCCCH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAED-N---------IPQLE----DISKFLKDSTGF---SLRPVA---GLLSSRDF   84 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~-~---------iP~le----~V~~~l~~~~g~---~~~~v~---~l~~~~s~   84 (655)
                      .+......|.+|+.|..++|.+...... .         ...+-    .+.. ....++|   .+++..   .+++++++
T Consensus        92 ~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~-~~~~G~faey~~v~~~~l~~lP~~~~~  170 (202)
T d1e3ia1          92 FFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYH-FMGVSSFSQYTVVSEANLARVDDEFDL  170 (202)
T ss_dssp             CSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBC-CTTTCCSBSEEEEEGGGEEECCTTSCG
T ss_pred             EeeccccccccccCCcccccccccccccCccceecccccccccccCceeeec-ccccCCceEEEEEehhhEEECCCCCCH
Confidence            5667889999999998888876543210 0         00000    0000 0011334   345533   35577888


Q ss_pred             HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEc
Q psy14589         85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIG  118 (655)
Q Consensus        85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~G  118 (655)
                      +.++++.+++.|+++++..   + ++|++|.|..
T Consensus       171 ~~~~~~~~~~~~~~~a~~~---~-k~G~~V~vi~  200 (202)
T d1e3ia1         171 DLLVTHALPFESINDAIDL---M-KEGKSIRTIL  200 (202)
T ss_dssp             GGGEEEEEEGGGHHHHHHH---H-HTTCCSEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHh---C-CCCCEEEEEE
Confidence            8888999999999888743   4 6899998764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.26  E-value=0.69  Score=38.37  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      .+++|+|.|| |.+|+-+++....+|.+|..+.+.+
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            4578999999 9999999999999999998887764

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=83.10  E-value=0.0052  Score=55.65  Aligned_cols=44  Identities=2%  Similarity=-0.136  Sum_probs=36.0

Q ss_pred             CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCch
Q psy14589         78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGN  123 (655)
Q Consensus        78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgV  123 (655)
                      +++++|+++||++++.++|||.++.. ... ..+++|||+|++|++
T Consensus       115 iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~-~~~~~Vli~ga~G~v  158 (162)
T d1tt7a1         115 LPQNLSLKEAMVDQLLTIVDREVSLE-ETP-GALKDILQNRIQGRV  158 (162)
T ss_dssp             CCTTCCHHHHHHSCSTTSEEEEECST-THH-HHHHHTTTTCCSSEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh-cCC-CCCCEEEEECCcceE
Confidence            56789999999999999999988654 334 566889999998875

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.94  E-value=0.51  Score=44.02  Aligned_cols=43  Identities=14%  Similarity=-0.058  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG  153 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~  153 (655)
                      .+|++||=.|++  .|..++.+++..+.+|++++.|+.-++.+++
T Consensus        50 ~~g~~vLDlGcG--~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          50 LQGDTLIDIGSG--PTIYQVLAACDSFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             CCEEEEEESSCT--TCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred             CCCCEEEEECCC--CCHhHHHHhccccCcEEEecCCHHHHHHHHH
Confidence            589999988983  3545555555434479999999988887753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.91  E-value=0.57  Score=43.49  Aligned_cols=36  Identities=28%  Similarity=0.336  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      +.+++|+|.|| |+.|+.++..++.+|.+|..+..++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            57899999999 9999999999899999998887654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=82.49  E-value=2  Score=42.44  Aligned_cols=32  Identities=9%  Similarity=0.036  Sum_probs=27.3

Q ss_pred             CCEEEEEcCCCchHHHHHH-HHHHcCCeEEEEe
Q psy14589        111 PDTLFIIGANRGNGLAAIQ-VGKAYGLTVFASV  142 (655)
Q Consensus       111 Gd~VLI~GasGgVG~~avQ-lAk~~Ga~Viat~  142 (655)
                      +.+|||+||+|=||+.++. |.+..|.+|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            5689999999999987774 6677899999986

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.43  E-value=4.9  Score=36.37  Aligned_cols=100  Identities=9%  Similarity=-0.038  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHh----CCC-cEEEeCCccchhHHHHHHHhcC-CCe
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYG----LGA-DYVVDHTIRELDRFANQILSYG-SEL  181 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~----LGA-d~vId~~~~~~~d~~~~i~~~~-~gv  181 (655)
                      ++|+++ |-++ -|.|-.+-.+++.. +++|+++|++++.++.+++    ++- -.+++..-.   ++...+.... +.+
T Consensus        22 ~~~~~~-lD~t-~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~---~~~~~~~~~~~~~v   96 (192)
T d1m6ya2          22 EDEKII-LDCT-VGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR---EADFLLKTLGIEKV   96 (192)
T ss_dssp             CTTCEE-EETT-CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG---GHHHHHHHTTCSCE
T ss_pred             CCCCEE-EEec-CCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh---hHHHHHHHcCCCCc
Confidence            577755 4444 33344444555554 6799999999998888764    332 233333221   4444555543 378


Q ss_pred             eEEEeCCCcc-------------hHHHHHHHHHHhccccceEEEe
Q psy14589        182 DADHPGFTDP-------------VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       182 DvV~D~vG~~-------------~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      |.|+=-.|-+             ..+.+..+.+.|++||+++.+.
T Consensus        97 dgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~  141 (192)
T d1m6ya2          97 DGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVIS  141 (192)
T ss_dssp             EEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred             ceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeec
Confidence            8875444431             1244677778899999999875

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=82.33  E-value=0.97  Score=42.36  Aligned_cols=73  Identities=11%  Similarity=-0.066  Sum_probs=46.1

Q ss_pred             CCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589        110 EPDTLFIIGA----------------NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ  173 (655)
Q Consensus       110 ~Gd~VLI~Ga----------------sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~  173 (655)
                      .|.+|||++|                ||-.|.+.++-|..+||+|..+.+... .   ..-....++...+.  ++..+.
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~-~---~~p~~~~~~~~~t~--~~m~~~   78 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-L---PTPPFVKRVDVMTA--LEMEAA   78 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-C---CCCTTEEEEECCSH--HHHHHH
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc-c---Ccccccccceehhh--HHHHHH
Confidence            7889999987                899999999999999999988766321 1   11122344444432  244445


Q ss_pred             HHhcCCCeeEEEeCC
Q psy14589        174 ILSYGSELDADHPGF  188 (655)
Q Consensus       174 i~~~~~gvDvV~D~v  188 (655)
                      +.+.-...|+++-++
T Consensus        79 ~~~~~~~~D~~i~aA   93 (223)
T d1u7za_          79 VNASVQQQNIFIGCA   93 (223)
T ss_dssp             HHHHGGGCSEEEECC
T ss_pred             HHhhhccceeEeeee
Confidence            544333456665443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=82.24  E-value=0.85  Score=37.78  Aligned_cols=36  Identities=14%  Similarity=0.068  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      .++++|+|.|+ |.+|+=.++.++.+|.+|..+.+++
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            57899999999 9999998899999999998888764

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=82.04  E-value=0.071  Score=48.15  Aligned_cols=31  Identities=29%  Similarity=0.300  Sum_probs=25.4

Q ss_pred             EEEEEcCCCchHHHHHHHHHHc-CCeEEEEec
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAY-GLTVFASVG  143 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~  143 (655)
                      +|.|+|++|-+|+++++++... ++++++...
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~   37 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALE   37 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            6899999999999999988775 667765543

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=81.88  E-value=0.31  Score=43.70  Aligned_cols=80  Identities=8%  Similarity=-0.109  Sum_probs=46.7

Q ss_pred             ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecCC---CCCCCCHHhHhhh-hhHHHHHHHH
Q psy14589         25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAG---LLSSRDFLAGLAF-RVFHSTQYIR  100 (655)
Q Consensus        25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~~---l~~~~s~~eAAal-~~a~~TA~~a  100 (655)
                      .+......|.+|..|..++|.+..+-....++         ....+.+++...   .+++.++.++|++ .+++.|++++
T Consensus        93 ~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G---------~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a~~~  163 (177)
T d1jvba1          93 NPWQGEGNCYYCRIGEEHLCDSPRWLGINFDG---------AYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDN  163 (177)
T ss_dssp             CCEECCSSSHHHHTTCGGGCSSCEEBTTTBCC---------SSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHHHHH
T ss_pred             eeccccccccccccccccccCCcceeeecccc---------ccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHHHHH
Confidence            45566788999999988777654431111110         111122333222   2345555666655 5788999999


Q ss_pred             hhcCCCCCCCCCEEEE
Q psy14589        101 HPSKPLYTPEPDTLFI  116 (655)
Q Consensus       101 L~~~~~l~~~Gd~VLI  116 (655)
                      +. ..++  .|++|||
T Consensus       164 ~~-~~~~--~G~~VlI  176 (177)
T d1jvba1         164 LE-NFKA--IGRQVLI  176 (177)
T ss_dssp             HH-TTCC--CSEEEEE
T ss_pred             HH-hhcc--cCCceEC
Confidence            85 4454  5999998

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.87  E-value=0.53  Score=41.42  Aligned_cols=82  Identities=12%  Similarity=-0.028  Sum_probs=45.7

Q ss_pred             EEEEEcCCCchHHHHHH-HHHHcC---CeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589        113 TLFIIGANRGNGLAAIQ-VGKAYG---LTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGSELDADHPG  187 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQ-lAk~~G---a~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~  187 (655)
                      +|.|.||+|-||+-.+| |..+..   .++.+..++...-..... .....+.+..+     .. ...    ++|++|-|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~-----~~-~~~----~~DivF~a   72 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFD-----LE-ALK----ALDIIVTC   72 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTC-----HH-HHH----TCSEEEEC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccc-----hh-hhh----cCcEEEEe
Confidence            69999999999999997 555432   356666554322111111 11111122111     11 111    68999999


Q ss_pred             CCcchHHHHHHHHHHhcccc
Q psy14589        188 FTDPVYRARRKYFADLAFNY  207 (655)
Q Consensus       188 vG~~~~~~l~~~l~~l~~gG  207 (655)
                      ++.+.   .......+...|
T Consensus        73 ~~~~~---s~~~~~~~~~~g   89 (146)
T d1t4ba1          73 QGGDY---TNEIYPKLRESG   89 (146)
T ss_dssp             SCHHH---HHHHHHHHHHTT
T ss_pred             cCchH---HHHhhHHHHhcC
Confidence            99885   445555554555

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.78  E-value=0.59  Score=46.07  Aligned_cols=91  Identities=12%  Similarity=-0.004  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHH----HhCCCc---EEEeCCccchhHHHHHHHhcCCC
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKA----YGLGAD---YVVDHTIRELDRFANQILSYGSE  180 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a----~~LGAd---~vId~~~~~~~d~~~~i~~~~~g  180 (655)
                      .+|++||-.|+  |.|..++.+|+ +|| +|++++.++ ..+.+    ++.|..   .++.-...   ++    ......
T Consensus        37 ~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~---~l----~~~~~~  105 (328)
T d1g6q1_          37 FKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE---DV----HLPFPK  105 (328)
T ss_dssp             HTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT---TS----CCSSSC
T ss_pred             CCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh---hc----cCcccc
Confidence            47899999998  34666665555 687 899999875 22233    344432   22322111   11    101236


Q ss_pred             eeEEEeC-CCc-----chHH-HHHHHHHHhccccceE
Q psy14589        181 LDADHPG-FTD-----PVYR-ARRKYFADLAFNYKHF  210 (655)
Q Consensus       181 vDvV~D~-vG~-----~~~~-~l~~~l~~l~~gGrlv  210 (655)
                      +|+|+-. ++.     ...+ .+...-+.|+|||+++
T Consensus       106 ~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         106 VDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            8988642 221     1211 1333346899999885

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=81.72  E-value=0.62  Score=43.81  Aligned_cols=36  Identities=28%  Similarity=0.306  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      ....+|+|.|| |..|+.++..++..|.+|.+++.++
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            56779999999 9999988887777899999997653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=81.63  E-value=3.8  Score=34.07  Aligned_cols=92  Identities=13%  Similarity=0.015  Sum_probs=59.6

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~  191 (655)
                      .|+|.|. |.+|..+++..+  |..|++++.++++.+.++..|...+. -...   + .+.+++.+ ..++.++-++..+
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~---~-~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVH-GDPT---R-VSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEE-SCTT---S-HHHHHHTTCTTCSEEEECCSSH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccc-cccC---C-HHHHHHhhhhcCcEEEEeccch
Confidence            5889998 999998776553  55677788889998888888876543 2211   1 23344432 3678888777766


Q ss_pred             h-HHHHHHHHHHhccccceEEE
Q psy14589        192 V-YRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       192 ~-~~~l~~~l~~l~~gGrlv~v  212 (655)
                      . +-......+.+.+..+++..
T Consensus        74 ~~n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          74 SETIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHHCSSSCEEEE
T ss_pred             hhhHHHHHHHHHHCCCceEEEE
Confidence            2 11234455566677776665

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=81.60  E-value=4.6  Score=39.18  Aligned_cols=103  Identities=10%  Similarity=0.086  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC---hHHHHHHHhCCCcEEEeCCccch-------------------
Q psy14589        110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC---PVGVAKAYGLGADYVVDHTIREL-------------------  167 (655)
Q Consensus       110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s---~~k~~~a~~LGAd~vId~~~~~~-------------------  167 (655)
                      ++.+|+. ..+|..|..+...|+.+|.+++++...   +.|.+.++.+||+.+........                   
T Consensus        74 ~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          74 KAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             CSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            3444555 444999999999999999976555432   46778889999986643221000                   


Q ss_pred             ----------hHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589        168 ----------DRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       168 ----------~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                                .....++.+..+.+|.|+-++|+. +...+...++.+.+..+++.+-
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                      000111222223689999999887 4233567777777888888874

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=81.41  E-value=7.8  Score=34.64  Aligned_cols=99  Identities=17%  Similarity=0.114  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc--EEEeCCccchhHHHHHHHhcC-CCeeEEE
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD--YVVDHTIRELDRFANQILSYG-SELDADH  185 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd--~vId~~~~~~~d~~~~i~~~~-~gvDvV~  185 (655)
                      ++|++ .|-+..|+=|+. -.+.+. +.+|+++|+.++..+.+++.-..  ..+...-   .++.+.+.... +.+|.|+
T Consensus        17 ~~g~~-~vD~T~G~GGhs-~~iL~~-~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f---~~~~~~l~~~~~~~vdgIl   90 (182)
T d1wg8a2          17 RPGGV-YVDATLGGAGHA-RGILER-GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAALGVERVDGIL   90 (182)
T ss_dssp             CTTCE-EEETTCTTSHHH-HHHHHT-TCEEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHTTCSCEEEEE
T ss_pred             CCCCE-EEEeCCCCcHHH-HHHhcc-cCcEEEEhhhhhHHHHHhhccccceeEeehHH---HHHHHHHHHcCCCccCEEE
Confidence            56775 566665665654 444553 67999999999988888764222  2233332   24555555543 3788876


Q ss_pred             eCCCcch-------------HHHHHHHHHHhccccceEEEe
Q psy14589        186 PGFTDPV-------------YRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       186 D~vG~~~-------------~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      =-.|-..             .+.++.+.+.++++|+++++.
T Consensus        91 ~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~  131 (182)
T d1wg8a2          91 ADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIA  131 (182)
T ss_dssp             EECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEe
Confidence            4445432             124678888999999999885

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=81.37  E-value=0.7  Score=41.90  Aligned_cols=39  Identities=13%  Similarity=0.096  Sum_probs=34.0

Q ss_pred             CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH
Q psy14589        112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA  151 (655)
Q Consensus       112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a  151 (655)
                      ++|.|.|+ |-+|.-.++++...|.+|+..+.+++.++.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            56999999 9999988888888899999999998876655

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=81.24  E-value=0.83  Score=38.19  Aligned_cols=36  Identities=19%  Similarity=0.206  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589        109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP  145 (655)
Q Consensus       109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~  145 (655)
                      +..++|+|.|| |.+|.-+++..+.+|.+|..+.+++
T Consensus        20 ~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          20 KESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            45789999999 9999999999999999999888754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=81.16  E-value=2.7  Score=37.53  Aligned_cols=92  Identities=9%  Similarity=-0.176  Sum_probs=60.2

Q ss_pred             hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHH
Q psy14589         91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRF  170 (655)
Q Consensus        91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~  170 (655)
                      ||.+...+..|....-- -.|++|+|.|.|.-||.=+..+....||+|+...+..                   .   ++
T Consensus        18 PcTp~aI~~lL~~y~i~-l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t-------------------~---~l   74 (166)
T d1b0aa1          18 PCTPRGIVTLLERYNID-TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------------K---NL   74 (166)
T ss_dssp             CHHHHHHHHHHHHTTCC-CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------------S---CH
T ss_pred             CchHHHHHHHHHHcCcc-cccceEEEEeccccccHHHHHHHHHhhcccccccccc-------------------c---hh
Confidence            44444444444433322 3899999999999999999999999999987653221                   1   23


Q ss_pred             HHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589        171 ANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF  213 (655)
Q Consensus       171 ~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~  213 (655)
                      .+.++    ..|+++-++|.+.  .+.  -+.+++|-.+|-+|
T Consensus        75 ~~~~~----~ADivI~a~G~p~--~i~--~~~vk~g~vvIDvG  109 (166)
T d1b0aa1          75 RHHVE----NADLLIVAVGKPG--FIP--GDWIKEGAIVIDVG  109 (166)
T ss_dssp             HHHHH----HCSEEEECSCCTT--CBC--TTTSCTTCEEEECC
T ss_pred             HHHHh----hhhHhhhhccCcc--ccc--ccccCCCcEEEecC
Confidence            33343    3688888888872  011  23577777777777

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=80.29  E-value=2.1  Score=37.33  Aligned_cols=85  Identities=9%  Similarity=-0.012  Sum_probs=54.7

Q ss_pred             EEEEEcCCCchHHH-HHHHHHHc-CCeEEEEecChHHHHHH-HhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589        113 TLFIIGANRGNGLA-AIQVGKAY-GLTVFASVGCPVGVAKA-YGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT  189 (655)
Q Consensus       113 ~VLI~GasGgVG~~-avQlAk~~-Ga~Viat~~s~~k~~~a-~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG  189 (655)
                      +|.|.|+ |.+|.. .+...+.. +.++++.+.++++.+.+ .+++...+.+  +     +.+.+ +  .++|+|+-++.
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~-----~~~ll-~--~~iD~V~I~tp   71 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT--D-----YRDVL-Q--YGVDAVMIHAA   71 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS--S-----TTGGG-G--GCCSEEEECSC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc--c-----HHHhc-c--cccceeccccc
Confidence            6889999 999954 55555554 55777788887776655 5677655432  1     11112 2  15899998888


Q ss_pred             cc-hHHHHHHHHHHhccccceEEE
Q psy14589        190 DP-VYRARRKYFADLAFNYKHFFF  212 (655)
Q Consensus       190 ~~-~~~~l~~~l~~l~~gGrlv~v  212 (655)
                      .. .   .+.+..+++. |+-|++
T Consensus        72 ~~~H---~~~~~~al~~-gk~V~~   91 (167)
T d1xeaa1          72 TDVH---STLAAFFLHL-GIPTFV   91 (167)
T ss_dssp             GGGH---HHHHHHHHHT-TCCEEE
T ss_pred             cccc---cccccccccc-cccccc
Confidence            77 4   5666777765 555543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=80.27  E-value=1.7  Score=37.56  Aligned_cols=66  Identities=9%  Similarity=-0.013  Sum_probs=43.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589        113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP  191 (655)
Q Consensus       113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~  191 (655)
                      +|.|.|. |.+|+..+.-.+..|.+|++.++++++....+..|+.. .+...    +   .++    ..|+|+-|+..+
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~----e---~~~----~~diIi~~v~~~   67 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGV-TETSE----E---DVY----SCPVVISAVTPG   67 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTC-EECCH----H---HHH----TSSEEEECSCGG
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccc-cccHH----H---HHh----hcCeEEEEecCc
Confidence            5889998 99999888877778999988877766655554434332 22211    1   222    357777777655