Psyllid ID: psy14612

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Protein Sequence
MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV
Secondary Structure (PSIPRED)
ccccHHHHcccccEEEEcccccccccccHHHHHHHHHHHHcccccEEEEEEcccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEEEEEEEEcccEEEEEEccccccccccccHHHHccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHcEEEEEEcccccccccHHHHHHHHHHHHHHccHHHccEEEcccccccEEEcHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHcccccccccccEcEEccccccccccEEccccHHHcEcccccHHHHH
Coil and Loop (DISEMBL)
MLASKKDLAKCKLYaqfdsedgldyggpsREFFFLLSRQlfnpyyglfeysandtytvqispmsafvdnyhepvalsdlesldNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKerelkpggrniavteknkktyv
Flexible Loop (DISEMBL)
mlaskkdlaKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGqakerelkpggrniavteknkktyv
Low Complexity Region (SEG)
MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV
Disordered region (IsUnstruct)
*********KCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFG*************************
Disordered Region (DISOPRED)
*********KCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV
Disordered Region (DISEMBL)
MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV
Disordered Region (DISPRO)
***SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNK*TYV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHEPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	140	2.2.26 [Sep-21-2011]
Q6I6G8	1578	E3 ubiquitin-protein liga	yes	N/A	0.992	0.088	0.586	2e-49
Q9P2P5	1572	E3 ubiquitin-protein liga	yes	N/A	0.992	0.088	0.586	2e-49
Q8K4P8	1604	E3 ubiquitin-protein liga	no	N/A	0.992	0.086	0.563	5e-47
Q76N89	1606	E3 ubiquitin-protein liga	no	N/A	0.992	0.086	0.557	1e-46
P46934	1319	E3 ubiquitin-protein liga	no	N/A	0.985	0.104	0.428	1e-34
Q9VVI3	1007	E3 ubiquitin-protein liga	no	N/A	0.971	0.135	0.421	7e-34
P46935	887	E3 ubiquitin-protein liga	no	N/A	0.985	0.155	0.434	1e-33
Q92462	767	E3 ubiquitin-protein liga	yes	N/A	0.985	0.179	0.448	2e-32
Q8CFI0	1004	E3 ubiquitin-protein liga	no	N/A	0.985	0.137	0.411	1e-31
Q96PU5	975	E3 ubiquitin-protein liga	no	N/A	0.985	0.141	0.411	1e-31

>sp|Q6I6G8|HECW2_MOUSE E3 ubiquitin-protein ligase HECW2 OS=Mus musculus GN=Hecw2 PE=2 SV=1

 Score =  194 bits (493), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/174 (58%), Positives = 117/174 (67%), Gaps = 35/174 (20%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M  S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQI
Sbjct: 1240 MGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQI 1299

Query: 61   SPMSAFVDNYHE-------------------------P---------VALSDLESLDNEF 86
            SPMSAFVDN+HE                         P           LSDLE LD EF
Sbjct: 1300 SPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRILCDLSDLEYLDEEF 1359

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL W+K++D+ +++LDL F V EE+FGQ  ERELKPGG NI VTEKNKK Y+
Sbjct: 1360 HQSLQWMKDNDI-HDILDLTFTVNEEVFGQITERELKPGGANIPVTEKNKKEYI 1412

E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.
Mus musculus (taxid: 10090)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q9P2P5|HECW2_HUMAN E3 ubiquitin-protein ligase HECW2 OS=Homo sapiens GN=HECW2 PE=1 SV=2

 Score =  194 bits (492), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/174 (58%), Positives = 117/174 (67%), Gaps = 35/174 (20%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M  S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQI
Sbjct: 1234 MGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQI 1293

Query: 61   SPMSAFVDNYHE-------------------------P---------VALSDLESLDNEF 86
            SPMSAFVDN+HE                         P           LSDLE LD EF
Sbjct: 1294 SPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRILCDLSDLEYLDEEF 1353

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL W+K++D+ +++LDL F V EE+FGQ  ERELKPGG NI VTEKNKK Y+
Sbjct: 1354 HQSLQWMKDNDI-HDILDLTFTVNEEVFGQITERELKPGGANIPVTEKNKKEYI 1406

E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q8K4P8|HECW1_MOUSE E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=3

 Score =  185 bits (470), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/174 (56%), Positives = 114/174 (65%), Gaps = 35/174 (20%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M  S+K+L + KLY  F  E+GLDY GPSREFFFLLS++LFNPYYGLFEYSANDTYTVQI
Sbjct: 1266 MAYSRKELQRNKLYITFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQI 1325

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFV+NY E                                  P  LSDLE LD EF
Sbjct: 1326 SPMSAFVENYLEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLKLPCDLSDLEYLDEEF 1385

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL W+K++++T+ +LDL F V EE+FGQ  ERELK GG N  VTEKNKK Y+
Sbjct: 1386 HQSLQWMKDNNITD-ILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYI 1438

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent degradation of DVL1.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q76N89|HECW1_HUMAN E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3

 Score =  184 bits (467), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/174 (55%), Positives = 114/174 (65%), Gaps = 35/174 (20%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M  S+K+L + KLY  F  E+GLDY GPSREFFFLLS++LFNPYYGLFEYSANDTYTVQI
Sbjct: 1268 MAYSRKELQRNKLYVTFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQI 1327

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFV+N+ E                                  P  LSDLE LD EF
Sbjct: 1328 SPMSAFVENHLEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLPCDLSDLEYLDEEF 1387

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL W+K++++T+ +LDL F V EE+FGQ  ERELK GG N  VTEKNKK Y+
Sbjct: 1388 HQSLQWMKDNNITD-ILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYI 1440

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent degradation of DVL1. Also targets the mutant SOD1 protein involved in familial amyotrophic lateral sclerosis (FALS). Forms cytotoxic aggregates with DVL1, SSR3 and mutant SOD1 that lead to motor neuron death in FALS.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|P46934|NEDD4_HUMAN E3 ubiquitin-protein ligase NEDD4 OS=Homo sapiens GN=NEDD4 PE=1 SV=4

 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 100/175 (57%), Gaps = 37/175 (21%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M   + D  K +L+ +FD E GLDYGG +RE+FFL+S+++FNPYYGLFEYSA D YT+QI
Sbjct: 980  MGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQI 1039

Query: 61   SPMSAFVDN-----------------------------------YHEPVALSDLESLDNE 85
            +P S   +                                     H+P+ L D+ES+D+E
Sbjct: 1040 NPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVDSE 1099

Query: 86   FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            ++ SL WI E+D T   LDL F + EE+FGQ  + ELK GG  I VT KNKK Y+
Sbjct: 1100 YYNSLRWILENDPTE--LDLRFIIDEELFGQTHQHELKNGGSEIVVTNKNKKEYI 1152

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in the pathway leading to the degradation of VEGFR-2/KDFR, independently of its ubiquitin-ligase activity. Monoubiquitinates IGF1R at multiple sites, thus leading to receptor internalization and degradation in lysosomes. Ubiquitinates FGFR1, leading to receptor internalization and degradation in lysosomes. According to PubMed:18562292 the direct link between NEDD4 and PTEN regulation through polyubiquitination described in PubMed:17218260 is questionable. Involved in ubiquitination of ERBB4 intracellular domain E4ICD. Involved in the budding of many viruses. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. Ubiquitinates TNK2 and regulates EGF-induced degradation of EGFR and TNF2.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9VVI3|NEDD4_DROME E3 ubiquitin-protein ligase Nedd-4 OS=Drosophila melanogaster GN=Nedd4 PE=1 SV=2

 Score =  142 bits (358), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 37/173 (21%)

Query: 3   ASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISP 62
            +K DL K KL+ +F+ E GLDYGG +RE+F+LLS+++FNPYYGLFEYSA D YT+QI+ 
Sbjct: 670 VTKTDLLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINN 729

Query: 63  MSAFVDNYH-----------------------------------EPVALSDLESLDNEFH 87
            S   +  H                                   +P+ L D+ES+D E++
Sbjct: 730 GSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYY 789

Query: 88  QSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            SL+WIKE+D    +L+L F + E++FGQ  + ELKPGG NI VT +NK  Y+
Sbjct: 790 NSLMWIKENDP--RILELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYI 840

Essential E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Down-regulates Notch/N signaling pathway by promoting Notch ubiquitination, endocytosis and degradation.

Drosophila melanogaster (taxid: 7227)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|P46935|NEDD4_MOUSE E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus GN=Nedd4 PE=1 SV=3

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 37/175 (21%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M   + DL K +L+ +FD E GLDYGG +RE+FFL+S+++FNPYYGLFEYSA D YT+QI
Sbjct: 548 MGVKRADLLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQI 607

Query: 61  SPMSAFVDNYH--------------------------EP---------VALSDLESLDNE 85
           +P S   +  H                           P         + L D+ES+D+E
Sbjct: 608 NPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLQKLITLHDMESVDSE 667

Query: 86  FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++ SL WI E+D T   LDL F + EE+FGQ  + ELK GG  I VT KNKK Y+
Sbjct: 668 YYSSLRWILENDPTE--LDLRFIIDEELFGQTHQHELKTGGSEIVVTNKNKKEYI 720

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Monoubiquitinates IGF1R at multiple sites, thus leading to receptor internalization and degradation in lysosomes. Ubiquitinates FGFR1, leading to receptor internalization and degradation in lysosomes. Involved in ubiquitination of ERBB4 intracellular domain E4ICD1 (PubMed:19193720). Predominantly involved in ubiquitination of membrane bound forms of ERBB4 rather than processed precursors and intermediate membrane-anchored 80 kDa fragments (m80HER4), with a lesser role in ubiquitination of ERBB4 intracellular domain E4ICD1 (PubMed:19047365). Involved in the pathway leading to the degradation of VEGFR-2/KDFR, independently of its ubiquitin-ligase activity. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. Ubiquitinates TNK2 and regulates EGF-induced degradation of EGFR and TNF2.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q92462|PUB1_SCHPO E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pub1 PE=1 SV=2

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 104/174 (59%), Gaps = 36/174 (20%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M  S  DL K +L  +FD EDGLDYGG SRE+FFLLS ++FNP+Y LFEYS+ D YT+QI
Sbjct: 431 MRQSATDLKK-RLMIKFDGEDGLDYGGLSREYFFLLSHEMFNPFYCLFEYSSVDNYTLQI 489

Query: 61  SPMSA------------------------FVDNY----------HEPVALSDLESLDNEF 86
           +P S                         FVD +           + V L D+ES+D E+
Sbjct: 490 NPHSGINPEHLNYFKFIGRVIGLAIFHRRFVDAFFVVSFYKMILQKKVTLQDMESMDAEY 549

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++SL+WI ++D+T  VLDL F+V +  FG+    +LKP GRNI VTE+NK+ YV
Sbjct: 550 YRSLVWILDNDITG-VLDLTFSVEDNCFGEVVTIDLKPNGRNIEVTEENKREYV 602

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Regulates ubiquitination of cdc25.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q8CFI0|NED4L_MOUSE E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus GN=Nedd4l PE=1 SV=2

 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 37/175 (21%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M   + D+ K +L+ +F+SE GLDYGG +RE+FFLLS+++FNPYYGLFEYSA D YT+QI
Sbjct: 665 MSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQI 724

Query: 61  SPMSAFVDNYH-----------------------------------EPVALSDLESLDNE 85
           +P S   +  H                                   + + L+D+ES+D+E
Sbjct: 725 NPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSE 784

Query: 86  FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++ SL WI E+D T   LDL F + EE FGQ  + +LKP G  I VT +NK+ Y+
Sbjct: 785 YYNSLKWILENDPTE--LDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYI 837

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Inhibits TGF-beta signaling by triggering SMAD2 and TGFBR1 ubiquitination and proteasome-dependent degradation. Promotes ubiquitination and internalization of various plasma membrane channels such as ENaC, Nav1.2, Nav1.3, Nav1.5, Nav1.7, Nav1.8, Kv1.3, EAAT1 or CLC5. Promotes ubiquitination and degradation of SGK1 and TNK2.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q96PU5|NED4L_HUMAN E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2

 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 37/175 (21%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M   + D+ K +L+ +F+SE GLDYGG +RE+FFLLS+++FNPYYGLFEYSA D YT+QI
Sbjct: 636 MSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQI 695

Query: 61  SPMSAFVDNYH-----------------------------------EPVALSDLESLDNE 85
           +P S   +  H                                   + + L+D+ES+D+E
Sbjct: 696 NPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSE 755

Query: 86  FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++ SL WI E+D T   LDL F + EE FGQ  + +LKP G  I VT +NK+ Y+
Sbjct: 756 YYNSLKWILENDPTE--LDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYI 808

E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Inhibits TGF-beta signaling by triggering SMAD2 and TGFBR1 ubiquitination and proteasome-dependent degradation. Promotes ubiquitination and internalization of various plasma membrane channels such as ENaC, Nav1.2, Nav1.3, Nav1.5, Nav1.7, Nav1.8, Kv1.3, EAAT1 or CLC5. Promotes ubiquitination and degradation of SGK1 and TNK2.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
307207975	1376	E3 ubiquitin-protein ligase HECW2 [Harpe	1.0	0.101	0.632	1e-54
332024049	1298	E3 ubiquitin-protein ligase HECW2 [Acrom	1.0	0.107	0.632	2e-54
350399424	1280	PREDICTED: E3 ubiquitin-protein ligase H	1.0	0.109	0.620	2e-54
380029644	1267	PREDICTED: E3 ubiquitin-protein ligase H	1.0	0.110	0.620	2e-54
328784479	1276	PREDICTED: e3 ubiquitin-protein ligase H	1.0	0.109	0.620	2e-54
307183265	1191	E3 ubiquitin-protein ligase HECW2 [Campo	1.0	0.117	0.632	2e-54
383853892	1261	PREDICTED: E3 ubiquitin-protein ligase H	1.0	0.111	0.620	6e-54
156545459	1205	PREDICTED: E3 ubiquitin-protein ligase H	1.0	0.116	0.620	1e-53
322787529	329	hypothetical protein SINV_15550 [Solenop	1.0	0.425	0.632	2e-53
91090886	1285	PREDICTED: similar to E3 ubiquitin-prote	1.0	0.108	0.634	3e-53

>gi|307207975|gb|EFN85534.1| E3 ubiquitin-protein ligase HECW2 [Harpegnathos saltator]

 Score =  217 bits (553), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/174 (63%), Positives = 122/174 (70%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M ASKKDL K KL   FD E+GLDYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQI
Sbjct: 1037 MAASKKDLQKGKLVVIFDHEEGLDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQI 1096

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 1097 SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 1156

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNIAVTEKNKK Y+
Sbjct: 1157 HQSLMWIKEKDISIEPLELTFSVTEELLGRVAERELKPGGRNIAVTEKNKKEYL 1210

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024049|gb|EGI64267.1| E3 ubiquitin-protein ligase HECW2 [Acromyrmex echinatior]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/174 (63%), Positives = 122/174 (70%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M ASKKDL K KL   FD E+GLDYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQI
Sbjct: 959  MAASKKDLQKGKLVVIFDHEEGLDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQI 1018

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 1019 SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 1078

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNIAVTEKNKK Y+
Sbjct: 1079 HQSLMWIKEKDISIEPLELTFSVTEELLGRVAERELKPGGRNIAVTEKNKKEYL 1132

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399424|ref|XP_003485518.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Bombus impatiens]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/174 (62%), Positives = 122/174 (70%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M ASKKDL K KL   FD E+G+DYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQ+
Sbjct: 941  MAASKKDLQKSKLVIMFDEEEGVDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQV 1000

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 1001 SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 1060

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNIAVTEKNKK Y+
Sbjct: 1061 HQSLMWIKERDISIEPLELTFSVTEELLGRVAERELKPGGRNIAVTEKNKKEYL 1114

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029644|ref|XP_003698477.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Apis florea]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/174 (62%), Positives = 122/174 (70%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M ASKKDL K KL   FD E+G+DYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQ+
Sbjct: 928  MAASKKDLQKSKLVIMFDEEEGVDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQV 987

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 988  SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 1047

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNIAVTEKNKK Y+
Sbjct: 1048 HQSLMWIKERDISIEPLELTFSVTEELLGRVAERELKPGGRNIAVTEKNKKEYL 1101

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328784479|ref|XP_392900.4| PREDICTED: e3 ubiquitin-protein ligase HECW2-like [Apis mellifera]

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/174 (62%), Positives = 122/174 (70%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M ASKKDL K KL   FD E+G+DYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQ+
Sbjct: 937  MAASKKDLQKSKLVIMFDEEEGVDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQV 996

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 997  SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 1056

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNIAVTEKNKK Y+
Sbjct: 1057 HQSLMWIKERDISIEPLELTFSVTEELLGRVAERELKPGGRNIAVTEKNKKEYL 1110

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183265|gb|EFN70134.1| E3 ubiquitin-protein ligase HECW2 [Camponotus floridanus]

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/174 (63%), Positives = 122/174 (70%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M ASKKDL K KL   FD E+GLDYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQI
Sbjct: 852  MAASKKDLQKGKLVIIFDHEEGLDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQI 911

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 912  SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 971

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNIAVTEKNKK Y+
Sbjct: 972  HQSLMWIKEKDISIEPLELTFSVTEELLGRVAERELKPGGRNIAVTEKNKKEYL 1025

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853892|ref|XP_003702456.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Megachile rotundata]

 Score =  215 bits (547), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 108/174 (62%), Positives = 121/174 (69%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M ASKKDL K KL   FD E+GLDYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQ+
Sbjct: 922  MAASKKDLQKGKLVVMFDHEEGLDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQV 981

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 982  SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 1041

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNI VTEKNKK Y+
Sbjct: 1042 HQSLMWIKEKDISIESLELTFSVTEELLGRVAERELKPGGRNIPVTEKNKKEYL 1095

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156545459|ref|XP_001606831.1| PREDICTED: E3 ubiquitin-protein ligase HECW2-like [Nasonia vitripennis]

 Score =  214 bits (544), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/174 (62%), Positives = 120/174 (68%), Gaps = 34/174 (19%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M  SKKDL K KL   FD E+GLDYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQ+
Sbjct: 866  MAVSKKDLQKGKLVVIFDREEGLDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQV 925

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 926  SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDVFFTRPFYKALLRIPASLSDLESLDQEF 985

Query: 87   HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL+WIKE D+T E L+L F+VTEE+ G+  ERELKPGGRNI VTEKNKK Y+
Sbjct: 986  HQSLMWIKEKDITIEPLELTFSVTEELLGRVAERELKPGGRNIPVTEKNKKEYL 1039

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787529|gb|EFZ13617.1| hypothetical protein SINV_15550 [Solenopsis invicta]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 110/174 (63%), Positives = 122/174 (70%), Gaps = 34/174 (19%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M ASKKDL K KL   FD E+GLDYGGPSREFFF LSR+LFNPYYGLFEYSANDTYTVQI
Sbjct: 18  MAASKKDLQKGKLVIIFDHEEGLDYGGPSREFFFHLSRELFNPYYGLFEYSANDTYTVQI 77

Query: 61  SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
           SPMSAFVDNYH+                                  P +LSDLESLD EF
Sbjct: 78  SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRIPASLSDLESLDQEF 137

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           HQSL+WIKE D++ E L+L F+VTEE+ G+  ERELKPGGRNIAVTEKNKK Y+
Sbjct: 138 HQSLMWIKEKDISIEPLELTFSVTEELLGRVAERELKPGGRNIAVTEKNKKEYL 191

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090886|ref|XP_973247.1| PREDICTED: similar to E3 ubiquitin-protein ligase HECW2 (HECT, C2 and WW domain-containing protein 2) (NEDD4-like E3 ubiquitin-protein ligase 2) [Tribolium castaneum] gi|270013232|gb|EFA09680.1| hypothetical protein TcasGA2_TC011808 [Tribolium castaneum]

 Score =  212 bits (540), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 111/175 (63%), Positives = 125/175 (71%), Gaps = 35/175 (20%)

Query: 1    MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            M A+KK+L K KL   +D+E+GLDYGGPSREFFFLLSR+LFNPYYGLFEYSANDTYTVQI
Sbjct: 945  MSANKKELQKGKLCVVWDNEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQI 1004

Query: 61   SPMSAFVDNYHE----------------------------------PVALSDLESLDNEF 86
            SPMSAFVDNYH+                                  PVALSDLESLD EF
Sbjct: 1005 SPMSAFVDNYHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVALSDLESLDFEF 1064

Query: 87   HQSLLWIKEHDVTNE-VLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            HQSL WI+EHDV+ +  L+L FAVTEE+FGQ  ERELKPGGRN+ VTEKNKK Y+
Sbjct: 1065 HQSLQWIREHDVSMQGELELTFAVTEEVFGQVLERELKPGGRNVPVTEKNKKEYL 1119

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	140
UNIPROTKB|I3L5X8	366	LOC100738946 "Uncharacterized	0.492	0.188	0.811	4.7e-50
UNIPROTKB|F1PQF5	1263	HECW2 "Uncharacterized protein	0.492	0.054	0.811	2.9e-47
UNIPROTKB|G3MXP2	1368	G3MXP2 "Uncharacterized protei	0.492	0.050	0.811	3.7e-47
UNIPROTKB|J9NSV9	1432	HECW2 "Uncharacterized protein	0.492	0.048	0.811	4.2e-47
UNIPROTKB|F1N645	1434	F1N645 "Uncharacterized protei	0.492	0.048	0.811	4.2e-47
UNIPROTKB|Q9P2P5	1572	HECW2 "E3 ubiquitin-protein li	0.492	0.043	0.811	5.4e-47
UNIPROTKB|F1NTZ8	1576	HECW2 "Uncharacterized protein	0.492	0.043	0.811	5.5e-47
RGD|1593244	1578	Hecw2 "HECT, C2 and WW domain	0.492	0.043	0.811	5.5e-47
MGI|MGI:2685817	1578	Hecw2 "HECT, C2 and WW domain	0.492	0.043	0.811	5.5e-47
ZFIN|ZDB-GENE-090311-22	1411	hecw2a "HECT, C2 and WW domain	0.514	0.051	0.777	1.3e-46

UNIPROTKB|I3L5X8 LOC100738946 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 304 (112.1 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:   101 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 160

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:   161 SAFVDNHHE 169

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|F1PQF5 HECW2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 304 (112.1 bits), Expect = 2.9e-47, Sum P(2) = 2.9e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:   928 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 987

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:   988 SAFVDNHHE 996

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|G3MXP2 G3MXP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 304 (112.1 bits), Expect = 3.7e-47, Sum P(2) = 3.7e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:  1033 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 1092

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:  1093 SAFVDNHHE 1101

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|J9NSV9 HECW2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 304 (112.1 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:  1097 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 1156

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:  1157 SAFVDNHHE 1165

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|F1N645 F1N645 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 304 (112.1 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:  1099 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 1158

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:  1159 SAFVDNHHE 1167

GO:0005622 "intracellular" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|Q9P2P5 HECW2 "E3 ubiquitin-protein ligase HECW2" [Homo sapiens (taxid:9606)]

 Score = 304 (112.1 bits), Expect = 5.4e-47, Sum P(2) = 5.4e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:  1237 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 1296

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:  1297 SAFVDNHHE 1305

GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0042787 "protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IBA

UNIPROTKB|F1NTZ8 HECW2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 304 (112.1 bits), Expect = 5.5e-47, Sum P(2) = 5.5e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:  1241 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 1300

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:  1301 SAFVDNHHE 1309

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|1593244 Hecw2 "HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2" [Rattus norvegicus (taxid:10116)]

 Score = 304 (112.1 bits), Expect = 5.5e-47, Sum P(2) = 5.5e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:  1243 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 1302

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:  1303 SAFVDNHHE 1311

GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0042787 "protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IBA

MGI|MGI:2685817 Hecw2 "HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2" [Mus musculus (taxid:10090)]

 Score = 304 (112.1 bits), Expect = 5.5e-47, Sum P(2) = 5.5e-47
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query:     4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPM 63
             S+KDL + KLY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQISPM
Sbjct:  1243 SRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPM 1302

Query:    64 SAFVDNYHE 72
             SAFVDN+HE
Sbjct:  1303 SAFVDNHHE 1311

GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0042787 "protein ubiquitination involved in ubiquitin-dependent protein catabolic process" evidence=IBA

ZFIN|ZDB-GENE-090311-22 hecw2a "HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a" [Danio rerio (taxid:7955)]

 Score = 306 (112.8 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
 Identities = 56/72 (77%), Positives = 63/72 (87%)

Query:     1 MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
             M  S+KDL + +LY  F  E+GLDY GPSREFFFL+SR+LFNPYYGLFEYSANDTYTVQI
Sbjct:  1073 MCYSRKDLQRSRLYVSFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQI 1132

Query:    61 SPMSAFVDNYHE 72
             SPMSAFVDN+HE
Sbjct:  1133 SPMSAFVDNHHE 1144

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006464 "cellular protein modification process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9P2P5	HECW2_HUMAN	6, ., 3, ., 2, ., -	0.5862	0.9928	0.0884	yes	N/A
Q6I6G8	HECW2_MOUSE	6, ., 3, ., 2, ., -	0.5862	0.9928	0.0880	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.3.2	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	140
cd00078	352	cd00078, HECTc, HECT domain; C-terminal catalytic	1e-41
smart00119	328	smart00119, HECTc, Domain Homologous to E6-AP Carb	3e-41
COG5021	872	COG5021, HUL4, Ubiquitin-protein ligase [Posttrans	6e-36
pfam00632	298	pfam00632, HECT, HECT-domain (ubiquitin-transferas	4e-20

>gnl|CDD|238033 cd00078, HECTc, HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3)

 Score =  140 bits (356), Expect = 1e-41
 Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 36/175 (20%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
              S  DL K  L  +F  E+G+D GG +REFF L+S++LFNP YGLF Y+ +D+  +  
Sbjct: 19  SKVSSSDLKK-VLEVEFVGEEGIDAGGVTREFFTLVSKELFNPSYGLFRYTPDDSGLLYP 77

Query: 61  SPMSAFVDNY----------------------------------HEPVALSDLESLDNEF 86
           +P S   +++                                   +P++L DLE LD E 
Sbjct: 78  NPSSFADEDHLKLFRFLGRLLGKALYEGRLLDLPFSRAFYKKLLGKPLSLEDLEELDPEL 137

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEI-FGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++SL  + ++D   + L+L F +  +  FG A   ELKPGGR+I VT +NK+ YV
Sbjct: 138 YKSLKELLDNDGDEDDLELTFTIELDSSFGGAVTVELKPGGRDIPVTNENKEEYV 192

It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains. Length = 352

>gnl|CDD|214523 smart00119, HECTc, Domain Homologous to E6-AP Carboxyl Terminus with

 Score =  139 bits (352), Expect = 3e-41
 Identities = 76/170 (44%), Positives = 94/170 (55%), Gaps = 37/170 (21%)

Query: 7   DLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAF 66
           DL K  L  +F+ E+GLD GG +REFFFLLS++LFNP YGLF YS ND Y +  +P S F
Sbjct: 1   DLKKRVLEIEFEGEEGLDGGGVTREFFFLLSKELFNPDYGLFRYSPND-YLLYPNPRSGF 59

Query: 67  VDNYH-----------------------------------EPVALSDLESLDNEFHQSLL 91
            +  H                                   +PV L DLESLD E ++SL 
Sbjct: 60  ANEEHLSYFRFIGRVLGKALYDNRLLDLFFARPFYKKLLGKPVTLHDLESLDPELYKSLK 119

Query: 92  WIKEHDVTNEVLDLNFA-VTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           W+  ++ T+E LDL F+ V    FGQ K  ELKPGG NI VTE+NKK YV
Sbjct: 120 WLLLNNDTSEELDLTFSIVLTSEFGQVKVVELKPGGSNIPVTEENKKEYV 169

E3 ubiquitin-protein ligases. Can bind to E2 enzymes. Length = 328

>gnl|CDD|227354 COG5021, HUL4, Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

 Score =  129 bits (327), Expect = 6e-36
 Identities = 66/169 (39%), Positives = 93/169 (55%), Gaps = 34/169 (20%)

Query: 6   KDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMS- 64
            D  K  L  +F  E+G+D GG +RE+ FLLS+++FNP YGLFEY   D YT+ I+P+S 
Sbjct: 537 GDDLKKTLEIEFVGEEGIDAGGLTREWLFLLSKEMFNPDYGLFEYITEDLYTLPINPLSS 596

Query: 65  ----------------------------AFVD-----NYHEPVALSDLESLDNEFHQSLL 91
                                        F          +PV+L DLESLD E ++SL+
Sbjct: 597 INPEHLSYFKFLGRVIGKAIYDSRILDVQFSKAFYKKLLGKPVSLVDLESLDPELYRSLV 656

Query: 92  WIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           W+  +D+   +LDL F V ++ FG+++  EL P GRNI+VT +NKK YV
Sbjct: 657 WLLNNDIDETILDLTFTVEDDSFGESRTVELIPNGRNISVTNENKKEYV 705

Length = 872

>gnl|CDD|216035 pfam00632, HECT, HECT-domain (ubiquitin-transferase)

 Score = 83.1 bits (206), Expect = 4e-20
 Identities = 44/140 (31%), Positives = 60/140 (42%), Gaps = 37/140 (26%)

Query: 35  LLSRQLFNPYYGLFEYSANDTYTVQISPMS-------------------AFVDNYH---- 71
           LLS++LFNP YGLF Y   ++  +  +P S                   A  +       
Sbjct: 2   LLSKELFNPDYGLFFYVTPNSGLLWPNPGSPESSADEELFKFLGALIGKAIYNGILLDLP 61

Query: 72  -----------EPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKER 120
                      +P+ L DLE +D E ++SL  + E D   E L L F V+ E        
Sbjct: 62  FPPAFWKKLLGKPITLEDLEEVDPELYRSLKSLLELDGDEEELCLTFTVSGEGE---GTI 118

Query: 121 ELKPGGRNIAVTEKNKKTYV 140
           EL P G NI VT +NK+ YV
Sbjct: 119 ELIPNGSNIPVTNENKEEYV 138

The name HECT comes from Homologous to the E6-AP Carboxyl Terminus. Length = 298

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	140
COG5021	872	HUL4 Ubiquitin-protein ligase [Posttranslational m	100.0
KOG0941|consensus	850		100.0
KOG0939|consensus	720		100.0
cd00078	352	HECTc HECT domain; C-terminal catalytic domain of	100.0
smart00119	336	HECTc Domain Homologous to E6-AP Carboxyl Terminus	100.0
KOG0942|consensus	1001		99.97
KOG4427|consensus	1096		99.95
KOG0940|consensus	358		99.9
PF00632	317	HECT: HECT-domain (ubiquitin-transferase); InterPr	99.68
KOG0170|consensus	621		99.6
KOG0943|consensus	3015		97.92

>COG5021 HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.6e-36  Score=265.38  Aligned_cols=138  Identities=50%  Similarity=0.863  Sum_probs=128.8

Q ss_pred             CCCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcCC--------
Q psy14612          1 MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE--------   72 (140)
Q Consensus         1 ~~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l~--------   72 (140)
                      |..++.++ ++.|.|+|.||+|+|+||++||||.++++++|+|+++||.++.++.+.++|||.+..+++||.        
T Consensus       533 ~~~~~~~~-k~~L~i~F~~EeGiD~GGltrE~~~lLs~~~Fnp~y~LF~y~t~d~~~~~~n~~s~~npe~L~yf~fiGrv  611 (872)
T COG5021         533 MDESGDDL-KKTLEIEFVGEEGIDAGGLTREWLFLLSKEMFNPDYGLFEYITEDLYTLPINPLSSINPEHLSYFKFLGRV  611 (872)
T ss_pred             HHhchhhh-cceEEEEecCcccccCCccchHHHHHHhHHhcCCcccceeeecccccccCcCccccCCHHHHHHHHHHHHH
Confidence            34566777 568999999999999999999999999999999999999999998888999999887777763        


Q ss_pred             --------------------------CCChhhHHhhCHHHHHHHHHHHhcCCCcc-ceeeEEEEEeeeCCeeEEEEccCC
Q psy14612         73 --------------------------PVALSDLESLDNEFHQSLLWIKEHDVTNE-VLDLNFAVTEEIFGQAKERELKPG  125 (140)
Q Consensus        73 --------------------------~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e-~l~l~F~~~~~~~G~~~~veL~~~  125 (140)
                                                |++++|++++||++|++|.||++++++ + .+++||++..+.+|..++||||||
T Consensus       612 IGkaIyd~~~LD~~F~~~fyKklL~~~~sl~Dl~s~Dpe~y~sLv~ll~~~~d-~~~l~l~Fsve~~~fg~~~tVeLipn  690 (872)
T COG5021         612 IGKAIYDSRILDVQFSKAFYKKLLGKPVSLVDLESLDPELYRSLVWLLNNDID-ETILDLTFTVEDDSFGESRTVELIPN  690 (872)
T ss_pred             HHHHHHhcceeeecchHHHHHHHhCCCCchhhhhhcCHHHHHHHHHHHcCCCC-cceeeeeEEEeecccCceeEEEeccC
Confidence                                      999999999999999999999999998 6 999999999999999999999999


Q ss_pred             CCccccCcchHhhcC
Q psy14612        126 GRNIAVTEKNKKTYV  140 (140)
Q Consensus       126 G~~i~VT~~N~~eYV  140 (140)
                      |++|+||++||++||
T Consensus       691 G~ni~VT~~Nk~eYV  705 (872)
T COG5021         691 GRNISVTNENKKEYV  705 (872)
T ss_pred             CccccccchHHHHHH
Confidence            999999999999997

>KOG0941|consensus

Probab=100.00  E-value=2.8e-34  Score=247.52  Aligned_cols=136  Identities=34%  Similarity=0.590  Sum_probs=117.9

Q ss_pred             CChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccC-------------
Q psy14612          3 ASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDN-------------   69 (140)
Q Consensus         3 ~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~-------------   69 (140)
                      ++..|| ||+|+|+|.||+|+|+|||+||||.++.+||++|++|||++.+++ ..+|++|.....++             
T Consensus       522 ~~~~Dl-~K~L~V~F~gE~g~DaGGv~kEfF~ll~~ei~~p~~GmF~~~e~s-~~~WF~~~~~~~~~~y~liGil~GLAI  599 (850)
T KOG0941|consen  522 ISMSDL-KKQLKVEFVGEEGVDAGGVRKEFFQLLVEEIFNPEYGMFTYDEES-SLLWFNPSPFEEEKQYHLIGILCGLAI  599 (850)
T ss_pred             hhhhhh-hcceEEEECCCcccccCchHHHHHHHHHHHHcCccccCeeccccc-ceeeecCCCCCccceeeehhHHHHHHH
Confidence            355688 689999999999999999999999999999999999999999876 46777765321111             


Q ss_pred             --------cC----------CCCChhhHHhhCHHHHHHHHHHHhcCC-C-ccceeeEEEEEeeeCCeeEEEEccCCCCcc
Q psy14612         70 --------YH----------EPVALSDLESLDNEFHQSLLWIKEHDV-T-NEVLDLNFAVTEEIFGQAKERELKPGGRNI  129 (140)
Q Consensus        70 --------~l----------~~~~l~DL~~~Dp~~~~sL~~ll~~~~-~-~e~l~l~F~~~~~~~G~~~~veL~~~G~~i  129 (140)
                              ++          .|+|++||.++.|.+++||+.||++.. + .+.++|||++.++.+|..++++|+|||.+|
T Consensus       600 yN~~ildlpFPlAlykkLl~~~~sl~DL~elsP~~~~sL~~lL~y~gdd~ed~f~l~F~i~~~~~g~~~~~~L~~nG~~i  679 (850)
T KOG0941|consen  600 YNNTILDLPFPLALYKKLLDKPPSLEDLKELSPSLGKSLKELLDYEGDDVEDVFDLTFQISQDDNGIPRTYELKPNGDEI  679 (850)
T ss_pred             hccceecCCCcHHHHHHHhcCCCCHHHHHhhChHhhhhHHHHHhccccchhhheeeEEEEEehhcCccceeeccCCCccc
Confidence                    11          199999999999999999999998754 2 388999999999999988999999999999


Q ss_pred             ccCcchHhhcC
Q psy14612        130 AVTEKNKKTYV  140 (140)
Q Consensus       130 ~VT~~N~~eYV  140 (140)
                      +||++||+|||
T Consensus       680 ~vt~~Nr~efV  690 (850)
T KOG0941|consen  680 PVTNENRREFV  690 (850)
T ss_pred             ccccccHHHHH
Confidence            99999999997

>KOG0939|consensus

Probab=100.00  E-value=1.5e-34  Score=245.22  Aligned_cols=137  Identities=42%  Similarity=0.692  Sum_probs=128.6

Q ss_pred             CCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcCC---------
Q psy14612          2 LASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE---------   72 (140)
Q Consensus         2 ~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l~---------   72 (140)
                      ..++++| +.++.|+|.||+|+|+|||.||||.++++++|+|+++||+..++++-+++|||.|..++.||.         
T Consensus       383 ~~s~~e~-~~rl~I~f~gEEg~D~gG~~rEw~~ll~r~ifnp~~alf~~~~~d~tt~~pn~~s~~np~hLs~fkf~Grii  461 (720)
T KOG0939|consen  383 YKSPEEL-KTRLEVTFQGEEGSDAGGVTREWLQLLSREIFNPRYALFTTVGSDQTTFHPNPNSYVNPEHLSYFKFVGRII  461 (720)
T ss_pred             hCCHHHH-hcceEEEEecccccccchHHHHHHHHHHHHHcCCCcceEEEcCCCceEEeeCCcccCChhhhhHHHhhHHHH
Confidence            4688999 579999999999999999999999999999999999999999888778999999988887773         


Q ss_pred             -------------------------CCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCCC
Q psy14612         73 -------------------------PVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGR  127 (140)
Q Consensus        73 -------------------------~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G~  127 (140)
                                               +++++|+++.||++|++|.||++++++ +.+++||+...+.+|..+++||+|||+
T Consensus       462 gKal~d~ql~~c~ftrsfyk~ilG~~v~~~d~es~DP~y~k~l~~il~ndis-~~l~ltfs~e~~~~g~~~~~eL~p~G~  540 (720)
T KOG0939|consen  462 GKALFDGQLLECYFTRSFYKHILGLPVTYHDMESADPEYYKSLVWILKNDIS-DTLELTFSEEDDEFGVESVVELKPGGA  540 (720)
T ss_pred             HHHHhcchhhhheeeHHHHhhccCCceeeeehhhcChHHhhceeehhcCCcc-cceeEEEEEeeccccccceeecccCCC
Confidence                                     899999999999999999999999998 779999999999999888999999999


Q ss_pred             ccccCcchHhhcC
Q psy14612        128 NIAVTEKNKKTYV  140 (140)
Q Consensus       128 ~i~VT~~N~~eYV  140 (140)
                      +|.||++||++||
T Consensus       541 ~i~Vt~~nK~~yv  553 (720)
T KOG0939|consen  541 KIYVTEANKQEYV  553 (720)
T ss_pred             ceeeccccHHHHH
Confidence            9999999999997

>cd00078 HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3)

Probab=100.00  E-value=8.2e-34  Score=230.48  Aligned_cols=137  Identities=44%  Similarity=0.703  Sum_probs=119.8

Q ss_pred             CChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcC-----------
Q psy14612          3 ASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH-----------   71 (140)
Q Consensus         3 ~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l-----------   71 (140)
                      +++.+| +++|+|+|.||.|+|+|||+||||+++|+|+++|+++||+.+++++..++|||.+...+.++           
T Consensus        21 ~~~~~l-~~~l~V~F~gE~g~D~GG~~rE~~~~l~~el~~~~~~lF~~~~~~~~~~~~~p~~~~~~~~~~~f~~~G~lig   99 (352)
T cd00078          21 VSSSDL-KKVLEVEFVGEEGIDAGGVTREFFTLVSKELFNPSYGLFRYTPDDSGLLYPNPSSFADEDHLKLFRFLGRLLG   99 (352)
T ss_pred             cCHHHh-cCceEEEECCCCccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCceEEeCCCcccchhHHHHHHHHHHHHH
Confidence            455678 57999999999999999999999999999999999999999988445788999875321111           


Q ss_pred             -----------------------CCCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeee-CCeeEEEEccCCCC
Q psy14612         72 -----------------------EPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEI-FGQAKERELKPGGR  127 (140)
Q Consensus        72 -----------------------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~-~G~~~~veL~~~G~  127 (140)
                                             .+++++||+++||++|++|++|++++.+.+.++|+|++..+. .|...++||+|||+
T Consensus       100 ~al~~~~~l~l~f~~~f~k~L~g~~~t~~Dl~~iD~~~~~sl~~l~~~~~~~~~l~l~F~~~~~~~~~~~~~veL~~~G~  179 (352)
T cd00078         100 KALYEGRLLDLPFSRAFYKKLLGKPLSLEDLEELDPELYKSLKELLDNDGDEDDLELTFTIELDSSFGGAVTVELKPGGR  179 (352)
T ss_pred             HHHHcCceeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhcCCchhhhcceeEEEEeecCCCcceEecCCCCC
Confidence                                   199999999999999999999999876447899999998766 78889999999999


Q ss_pred             ccccCcchHhhcC
Q psy14612        128 NIAVTEKNKKTYV  140 (140)
Q Consensus       128 ~i~VT~~N~~eYV  140 (140)
                      +++||.+|+++||
T Consensus       180 ~~~VT~~N~~eYv  192 (352)
T cd00078         180 DIPVTNENKEEYV  192 (352)
T ss_pred             CCcCCHHHHHHHH
Confidence            9999999999997

It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.

>smart00119 HECTc Domain Homologous to E6-AP Carboxyl Terminus with

Probab=100.00  E-value=4.1e-33  Score=225.52  Aligned_cols=135  Identities=54%  Similarity=0.851  Sum_probs=115.2

Q ss_pred             CChhhhcccc-eEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCccc-ccCcC---------
Q psy14612          3 ASKKDLAKCK-LYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAF-VDNYH---------   71 (140)
Q Consensus         3 ~~~~~l~~~~-l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~-~~~~l---------   71 (140)
                      .+..+| |++ |+|+|.||+|+|+|||+||||+++++++++|++|||+++++++ .++|+|.+.. .+.|+         
T Consensus         2 ~~~~~~-~~~~l~V~F~gE~g~d~gG~~rEf~~~l~~el~~~~~~lf~~~~~~~-~~~~~p~~~~~~~~~l~~f~~~G~l   79 (336)
T smart00119        2 SSDEDL-KKSVLEIEFEGEEGLDGGGVTREFFFLLSKELFNPDYGLFRYSPNDY-LLYPNPRAFFANPEHLAYFRFIGRV   79 (336)
T ss_pred             CChHHh-CCCeEEEEECCCCCccCCchHHHHHHHHHHHHhCcccCCceEcCCCC-eEEeCCCccccchHHHHHHHHHHHH
Confidence            356788 567 9999999999999999999999999999999999999998764 6788886532 12221         


Q ss_pred             -------------------------CCCChhhHHhhCHHHHHHHHHH-HhcCCCccceeeEEEEEe-eeCCeeEEEEccC
Q psy14612         72 -------------------------EPVALSDLESLDNEFHQSLLWI-KEHDVTNEVLDLNFAVTE-EIFGQAKERELKP  124 (140)
Q Consensus        72 -------------------------~~~~l~DL~~~Dp~~~~sL~~l-l~~~~~~e~l~l~F~~~~-~~~G~~~~veL~~  124 (140)
                                               .+++++||+++||++|++|++| ++++.. +.++++|++.. ...|...++||+|
T Consensus        80 ig~al~~~~~~~l~f~~~f~k~L~~~~~tl~Dl~~~D~~~~~sl~~l~~~~~~~-~~~~l~F~~~~~~~~g~~~~~eL~~  158 (336)
T smart00119       80 LGKALYDNRLLDLFFARPFYKKLLGKPVTLHDLESLDPELYKSLKWLLLNNDTS-EELDLTFSIVLTSEFGQVKVVELKP  158 (336)
T ss_pred             HHHHHHcCCeeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHHhCCCc-ccccceEEEEeeecCCCcceEecCC
Confidence                                     1999999999999999999999 566665 67999999654 4477788999999


Q ss_pred             CCCccccCcchHhhcC
Q psy14612        125 GGRNIAVTEKNKKTYV  140 (140)
Q Consensus       125 ~G~~i~VT~~N~~eYV  140 (140)
                      ||++++||.+||++||
T Consensus       159 ~G~~~~Vt~~N~~eYv  174 (336)
T smart00119      159 GGSNIPVTEENKKEYV  174 (336)
T ss_pred             CCCCCcCCHHHHHHHH
Confidence            9999999999999997

E3 ubiquitin-protein ligases. Can bind to E2 enzymes.

>KOG0942|consensus

Probab=99.97  E-value=2.2e-31  Score=230.90  Aligned_cols=134  Identities=34%  Similarity=0.557  Sum_probs=118.0

Q ss_pred             ChhhhcccceEEEEec-----ccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccc-----------
Q psy14612          4 SKKDLAKCKLYAQFDS-----EDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFV-----------   67 (140)
Q Consensus         4 ~~~~l~~~~l~V~F~g-----E~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~-----------   67 (140)
                      ...|| |..++|+|++     |+|||+||++|||++.++++.|+|++|+|+.+++  +.++|||.+++.           
T Consensus       661 ~e~dl-k~~iRVtfVne~G~~EaGIDGGGIfkEFLtel~ktaFdpn~GlF~~T~~--~lLYPNp~~~~l~~~~~lkhy~F  737 (1001)
T KOG0942|consen  661 GEPDL-KSSIRVTFVNEHGVDEAGIDGGGIFKEFLTELLKTAFDPNYGLFKETED--HLLYPNPTAAMLLDVDCLKHYYF  737 (1001)
T ss_pred             CCccc-ccceEEEEecccCccccCccCcccHHHHHHHHHHhhcCccccceeeccc--ceecCCCCchhhhhhHHHHHHHH
Confidence            34566 6789999996     7999999999999999999999999999999865  478999987531           


Q ss_pred             ----------cCcC-----------------CCCChhhHHhhCHHHHHHHHHHHhcCC-CccceeeEEEEEeeeCCeeEE
Q psy14612         68 ----------DNYH-----------------EPVALSDLESLDNEFHQSLLWIKEHDV-TNEVLDLNFAVTEEIFGQAKE  119 (140)
Q Consensus        68 ----------~~~l-----------------~~~~l~DL~~~Dp~~~~sL~~ll~~~~-~~e~l~l~F~~~~~~~G~~~~  119 (140)
                                +..|                 ..++++||.++||++|++|..|++++. ++++|.|+|+|..+.+|..+.
T Consensus       738 LGrllGK~iYE~iLvdvpFA~FFlaKllg~~~~vd~~dL~SlDPeLY~nLifLk~y~gddi~eL~L~FtVv~~e~G~~~v  817 (1001)
T KOG0942|consen  738 LGRLLGKCIYEGILVDVPFAEFFLAKLLGTSNDVDLHDLASLDPELYKNLIFLKNYNGDDISELQLDFTVVNSELGERQV  817 (1001)
T ss_pred             HHHHHHHHHHhcceecccHHHHHHHHHhCCCCCCChhhhcccCHHHHHHHHHHHhcCCCchhhccceEEEecccccccee
Confidence                      1111                 167999999999999999999999876 578999999999999999999


Q ss_pred             EEccCCCCccccCcchHhhcC
Q psy14612        120 RELKPGGRNIAVTEKNKKTYV  140 (140)
Q Consensus       120 veL~~~G~~i~VT~~N~~eYV  140 (140)
                      |||+|||++|+||++||.+||
T Consensus       818 VeLkPnGs~i~VTneNvi~Yi  838 (1001)
T KOG0942|consen  818 VELKPNGSKIRVTNENVIEYI  838 (1001)
T ss_pred             EEeccCCccceeechhhhhhh
Confidence            999999999999999999997

>KOG4427|consensus

Probab=99.95  E-value=4e-28  Score=207.86  Aligned_cols=134  Identities=33%  Similarity=0.518  Sum_probs=121.1

Q ss_pred             hhhhcccceEEEEec-----ccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcCC-------
Q psy14612          5 KKDLAKCKLYAQFDS-----EDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE-------   72 (140)
Q Consensus         5 ~~~l~~~~l~V~F~g-----E~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l~-------   72 (140)
                      ..-| |..++|+|++     |+|||.+||+|||+..+.+..|+|+++||..++.++ .++|.|.|...++||+       
T Consensus       734 ~~al-Ks~IrVkFVNeqGl~EAGiDqdGvfKEFLeeiiKkvFdp~lnLFstTs~d~-~LyPSPts~~~en~lqlfeFvGr  811 (1096)
T KOG4427|consen  734 SPAL-KSVIRVKFVNEQGLDEAGIDQDGVFKEFLEEIIKKVFDPELNLFSTTSTDR-RLYPSPTSYHHENHLQLFEFVGR  811 (1096)
T ss_pred             chhh-hceEEEEEecccCCcccccCccchHHHHHHHHHHHHhcccccccccCCCCc-eecCCchhhhhhchhHHHHHHHH
Confidence            3345 7899999997     688899999999999999999999999999988643 6789999987777763       


Q ss_pred             -----------------------------CCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEcc
Q psy14612         73 -----------------------------PVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELK  123 (140)
Q Consensus        73 -----------------------------~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~  123 (140)
                                                   ...++.|.++||++|+||..++.++.+..+|||||+|+.+..|+..++||+
T Consensus       812 mlGKAvYEGIvvDv~fa~vflsqlLG~~~~s~~DELs~LDpElYrnLtfvKhYdgd~~dL~LtfSvdedfmGkis~~eL~  891 (1096)
T KOG4427|consen  812 MLGKAVYEGIVVDVPFASVFLSQLLGRHSLSFIDELSSLDPELYRNLTFVKHYDGDLKDLCLTFSVDEDFMGKISTIELK  891 (1096)
T ss_pred             HHHHHHhcceEEecccHHHHHHHHhcccchhhhhhccccCHHHHhhhhHHHhhcccHhhheeeeEechhhccceeEEEec
Confidence                                         447899999999999999999999998899999999999999999999999


Q ss_pred             CCCCccccCcchHhhcC
Q psy14612        124 PGGRNIAVTEKNKKTYV  140 (140)
Q Consensus       124 ~~G~~i~VT~~N~~eYV  140 (140)
                      |||+.|.||++||-+||
T Consensus       892 PgGkt~sVtneNKi~YI  908 (1096)
T KOG4427|consen  892 PGGKTISVTNENKIQYI  908 (1096)
T ss_pred             cCCcceeccccchHHHH
Confidence            99999999999999997

>KOG0940|consensus

Probab=99.90  E-value=2.8e-25  Score=180.54  Aligned_cols=135  Identities=49%  Similarity=0.829  Sum_probs=125.8

Q ss_pred             CCCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcCC--------
Q psy14612          1 MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE--------   72 (140)
Q Consensus         1 ~~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l~--------   72 (140)
                      |.+++++| |+.+-+.|.||+|.|.||+.||||.++++++|.|-+++|.++.++ +++|++|.+..++.||.        
T Consensus        35 M~~~~~~~-~~~l~~~~~~ee~ldy~glprewf~~lS~e~~~p~~~~~~~~~~~-~tlq~~P~sg~~p~~l~~~~~vg~~  112 (358)
T KOG0940|consen   35 MNPKPSDL-QKRLMREFKGEEGLDYGGLPREWFFLLSHEGFNPWYGLFQHSRKD-YTLWLNPRSGVNPGHLTYFRFVGGV  112 (358)
T ss_pred             hCCCchhh-hhcceeecccccccccCCCCcceeeeeccccCCcceeeeeecccc-cccccCCccCCCCCccccccccccc
Confidence            88999997 689999999999999999999999999999999999999999887 88999999887776652        


Q ss_pred             -------------------------CCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCCC
Q psy14612         73 -------------------------PVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGR  127 (140)
Q Consensus        73 -------------------------~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G~  127 (140)
                                               +++++|++.+|+++|+++.|+++++.. .  +++|+++...+|+....+|+|+|.
T Consensus       113 ~~l~~~h~~~~~~g~r~F~~~i~~ktt~ldd~e~~d~e~~~s~~~~~en~~~-~--~~~f~~~~~~~g~~~~~~l~p~g~  189 (358)
T KOG0940|consen  113 LALAGWHMRFTDTGQRPFYKHILKKTTTLDDREAVDPEFYNSLTWIRENDPT-N--DLTFSVESEVLGQITTQELKPNGA  189 (358)
T ss_pred             ccccceeeEecCCCceehhhhhhcCccccCchhhcCccccccccccccCCcc-c--chhhhcchhhcCCccceeecCCCc
Confidence                                     889999999999999999999999987 4  999999999999999999999999


Q ss_pred             ccccCcchHhhcC
Q psy14612        128 NIAVTEKNKKTYV  140 (140)
Q Consensus       128 ~i~VT~~N~~eYV  140 (140)
                      ++.||.+|+++||
T Consensus       190 ~~~v~~~n~~~yi  202 (358)
T KOG0940|consen  190 NIQVTEENKKEYI  202 (358)
T ss_pred             ccccccccHHHHH
Confidence            9999999999996

>PF00632 HECT: HECT-domain (ubiquitin-transferase); InterPro: IPR000569 The name HECT comes from 'Homologous to the E6-AP Carboxyl Terminus' []

Probab=99.68  E-value=4.1e-17  Score=130.37  Aligned_cols=106  Identities=42%  Similarity=0.586  Sum_probs=80.0

Q ss_pred             HHHHHHhcCCCCCceEEecCCeeEEEeCCCcc-------cccC------------------------cC-----------
Q psy14612         34 FLLSRQLFNPYYGLFEYSANDTYTVQISPMSA-------FVDN------------------------YH-----------   71 (140)
Q Consensus        34 ~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~-------~~~~------------------------~l-----------   71 (140)
                      ++||+|||+|++|||..++++. .++++|...       ..+.                        +|           
T Consensus         1 ~l~~~el~~~~~~lF~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~lig~ai~~~~~l~~~f~~~~~k~l~~g   79 (317)
T PF00632_consen    1 TLLCKELFDPNLGLFYQTSNNG-LFWPNPNSNRDSPSPASSEEHLKMFRFLGRLIGKAIRNGIPLPLPFSPAFWKYLLSG   79 (317)
T ss_dssp             HHHHHHHTSGGGSSEESSTTTC-EEEEECCH----TTGGGSTTHHHHHHHHHHHHHHHHHTTS-ESSEB-HHHHHHHT-T
T ss_pred             CHHHHHhcCccCCCceEcCCCC-EEeCCCcccccccccccCHHHHHHHHHHHHHHHHHHHcCCccccCcCHHHHHHHhcC
Confidence            5899999999999998777654 677776410       0000                        01           


Q ss_pred             CCCChhhHHhhCHHHHHHHHHHHhcCC---CccceeeEEEEEeee-CCeeEEEEccCCCCccccCcchHhhcC
Q psy14612         72 EPVALSDLESLDNEFHQSLLWIKEHDV---TNEVLDLNFAVTEEI-FGQAKERELKPGGRNIAVTEKNKKTYV  140 (140)
Q Consensus        72 ~~~~l~DL~~~Dp~~~~sL~~ll~~~~---~~e~l~l~F~~~~~~-~G~~~~veL~~~G~~i~VT~~N~~eYV  140 (140)
                      .+++++||+++||+++++|++|++.+.   ++++++++|++.... .|..+++||++||++++||.+||++||
T Consensus        80 ~~~t~~Dl~~iD~~~~~sl~~l~~~~~~~~~~~~l~l~F~~~~~~~~~~~~~~eL~~~G~~~~Vt~~N~~eyv  152 (317)
T PF00632_consen   80 EPLTLEDLEEIDPELYKSLKKLLDMDNDEEDVEDLDLTFSVPSSSGGGQVEEVELIPGGSNIPVTNENKEEYV  152 (317)
T ss_dssp             ----HHHHHCCSHHHHHHHHHHHHSHSGSCTTSGCTEBSEEEEEECTTEEEEEESSTTGGGSB-TTTTHHHHH
T ss_pred             CCCccccchhcCchhhcchhhheeccccccceeecceEEEEecccccCceeEeeecCCCcccccchhhhhHHH
Confidence            178999999999999999999996532   246899999987543 567788999999999999999999996

Proteins containing this domain at the C terminus include ubiquitin-protein ligase, which regulates ubiquitination of CDC25. Ubiquitin-protein ligase accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester, and then directly transfers the ubiquitin to targeted substrates. A cysteine residue is required for ubiquitin-thiolester formation. Human thyroid receptor interacting protein 12, which also contains this domain, is a component of an ATP-dependent multisubunit protein that interacts with the ligand binding domain of the thyroid hormone receptor. It could be an E3 ubiquitin-protein ligase. Human ubiquitin-protein ligase E3A interacts with the E6 protein of the cancer-associated Human papillomavirus type 16 and Human papillomavirus type 18. The E6/E6-AP complex binds to and targets the P53 tumour-suppressor protein for ubiquitin-mediated proteolysis.; GO: 0016881 acid-amino acid ligase activity, 0006464 protein modification process, 0005622 intracellular; PDB: 3TUG_A 1ZVD_A 1C4Z_C 1D5F_B 1ND7_A 2XBB_A 2XBF_A 3PT3_A 3G1N_B 3H1D_A ....

>KOG0170|consensus

Probab=99.60  E-value=6.1e-16  Score=129.03  Aligned_cols=125  Identities=26%  Similarity=0.416  Sum_probs=95.7

Q ss_pred             ccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEec----------CCee-----EEEeCCCccc-----ccC
Q psy14612         10 KCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSA----------NDTY-----TVQISPMSAF-----VDN   69 (140)
Q Consensus        10 ~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~----------~~~~-----~~~~~p~s~~-----~~~   69 (140)
                      +..|.|+|.+|.|.. -||+-|||++++++++.++.|||+.+.          +..+     .+.|.|...+     +++
T Consensus       250 ~~vLEIEY~~EvGTG-LGPTLEFYtlVSk~fq~~sLgmWR~~s~s~~~~k~~~~t~~v~~~sgLFp~P~~~ts~~se~~k  328 (621)
T KOG0170|consen  250 KAVLEIEYEEEVGTG-LGPTLEFYTLVSKEFQRASLGMWRCNSVSYRSGKPQENTKDVYITSGLFPRPWPPTSNSSENEK  328 (621)
T ss_pred             cceEEEEeccccccC-CCcceeeHHHHHHHHhhccccccccCceeeccCCCCCCcchhhhccccCCCCCCCCCCchhHHH
Confidence            567999999999997 599999999999999999999999741          2111     1223333211     000


Q ss_pred             --------------cC--------------------CCCChhhHHhhCHHHHHHHHHHHh--------------------
Q psy14612         70 --------------YH--------------------EPVALSDLESLDNEFHQSLLWIKE--------------------   95 (140)
Q Consensus        70 --------------~l--------------------~~~~l~DL~~~Dp~~~~sL~~ll~--------------------   95 (140)
                                    .|                    +++|..|+..+||+++++|..|..                    
T Consensus       329 vi~~F~~LG~~vAkal~D~Rildlpls~~Fykl~l~q~Lt~~dv~~vd~~l~~sL~~Le~vv~~k~~~~~~~~d~~~a~~  408 (621)
T KOG0170|consen  329 VIELFRLLGTFVAKALQDGRILDLPLSKAFYKLILGQELTSHDVTTVDPELAKSLLELELVVPRKKKLEKYIGDVANADD  408 (621)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEeeeccHHHHHHHhcCCcccccceecCHHHHHHHHHHHHHhhhhhhhhhhccccccccc
Confidence                          00                    289999999999999999988743                    


Q ss_pred             ----cCCCccceeeEEEEEeeeCCeeEEEEccCCCCccccCcchHhhcC
Q psy14612         96 ----HDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV  140 (140)
Q Consensus        96 ----~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G~~i~VT~~N~~eYV  140 (140)
                          ++..+|+|+|+|++..     ...+||+|||.+++||..|.+|||
T Consensus       409 dltl~g~~iEdL~LdFTLPG-----~p~ieL~p~g~~~~V~~~NleEYi  452 (621)
T KOG0170|consen  409 DLTLNGCSIEDLSLDFTLPG-----FPDIELIPGGANKPVTISNLEEYI  452 (621)
T ss_pred             ceeecCcchhhceeeEecCC-----CCCeeeccCCCCCccccccHHHHH
Confidence                0112489999999872     246999999999999999999996

>KOG0943|consensus

Probab=97.92  E-value=4.5e-06  Score=76.53  Aligned_cols=67  Identities=24%  Similarity=0.328  Sum_probs=49.6

Q ss_pred             CCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeee-CC------eeEEEEccCCCCccccCcchHhhcC
Q psy14612         73 PVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEI-FG------QAKERELKPGGRNIAVTEKNKKTYV  140 (140)
Q Consensus        73 ~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~-~G------~~~~veL~~~G~~i~VT~~N~~eYV  140 (140)
                      ++.+.|+..+||.+|.+|+.|-...-. .+++-.|++.... -|      ...+|+|+|||-+|+||.+|+.|||
T Consensus      2778 ~icW~Df~FfDPVlfenLRaLfkAhps-Sd~DadFS~md~aa~gdlckee~a~qVeL~PNGdeilVnkdNViEYV 2851 (3015)
T KOG0943|consen 2778 KICWHDFAFFDPVLFENLRALFKAHPS-SDADADFSAMDLAAAGDLCKEEGAGQVELIPNGDEILVNKDNVIEYV 2851 (3015)
T ss_pred             ceehhhhccccHHHHHHHHHHHhcCCc-ccccchhhHHHHhhccchhhhcCceeEEEecCCceeeecchhHHHHH
Confidence            899999999999999999998643221 2333444432111 11      2467999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	140
2xbb_A	386	Nedd4 Hect:ub Complex Length = 386		1e-35
3jw0_C	385	E2~ubiquitin-Hect Length = 385		2e-32
3jvz_C	385	E2~ubiquitin-Hect Length = 385		2e-32
2oni_A	392	Catalytic Domain Of The Human Nedd4-Like E3 Ligase		3e-31
3olm_A	429	Structure And Function Of A Ubiquitin Binding Site		2e-29
3tug_A	398	Crystal Structure Of The Hect Domain Of Itch E3 Ubi		3e-29
1zvd_A	380	Regulation Of Smurf2 Ubiquitin Ligase Activity By A		2e-26
1nd7_A	374	Conformational Flexibility Underlies Ubiquitin Liga		8e-26
3h1d_A	405	Structure Of The Huwe1 Hect Domain Length = 405		1e-20
3g1n_A	388	Catalytic Domain Of The Human E3 Ubiquitin-Protein		4e-20
1c4z_A	358	Structure Of E6ap: Insights Into Ubiquitination Pat		1e-06

>pdb|2XBB|A Chain A, Nedd4 Hect:ub Complex Length = 386

Iteration: 1
 Score =  144 bits (363), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 100/175 (57%), Gaps = 37/175 (21%)
Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M   + D  K +L+ +FD E GLDYGG +RE+FFL+S+++FNPYYGLFEYSA D YT+QI
Sbjct: 47  MGVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQI 106
Query: 61  SPMSAFVDN-----------------------------------YHEPVALSDLESLDNE 85
           +P S   +                                     H+P+ L D+ES+D+E
Sbjct: 107 NPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLHKPITLHDMESVDSE 166
Query: 86  FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++ SL WI E+D T   LDL F + EE+FGQ  + ELK GG  I VT KNKK Y+
Sbjct: 167 YYNSLRWILENDPTE--LDLRFIIDEELFGQTHQHELKNGGSEIVVTNKNKKEYI 219

>pdb|3JW0|C Chain C, E2~ubiquitin-Hect Length = 385

Iteration: 1
 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 37/175 (21%)
Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M   + D+ K +L+ +F+SE GLDYGG +RE+FFLLS+++FNPYYGLFEYSA D YT+QI
Sbjct: 46  MSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQI 105
Query: 61  SPMSAFVDNYH-----------------------------------EPVALSDLESLDNE 85
           +P S   +  H                                   + + L+D+ES+D+E
Sbjct: 106 NPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSE 165
Query: 86  FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++ SL WI E+D T   LDL F + EE FGQ  + +LKP G  I VT +NK+ Y+
Sbjct: 166 YYNSLKWILENDPTE--LDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYI 218

>pdb|3JVZ|C Chain C, E2~ubiquitin-Hect Length = 385

Iteration: 1
 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 37/175 (21%)
Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M   + D+ K +L+ +F+SE GLDYGG +RE+FFLLS+++FNPYYGLFEYSA D YT+QI
Sbjct: 46  MSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQI 105
Query: 61  SPMSAFVDNYH-----------------------------------EPVALSDLESLDNE 85
           +P S   +  H                                   + + L+D+ES+D+E
Sbjct: 106 NPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSE 165
Query: 86  FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++ SL WI E+D T   LDL F + EE FGQ  + +LKP G  I VT +NK+ Y+
Sbjct: 166 YYNSLKWILENDPTE--LDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYI 218

>pdb|2ONI|A Chain A, Catalytic Domain Of The Human Nedd4-Like E3 Ligase Length = 392

Iteration: 1
 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 37/173 (21%)
Query: 3   ASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISP 62
             + D+ K +L+ +F+SE GLDYGG +RE+FFLLS++ FNPYYGLFEYSA D YT+QI+P
Sbjct: 63  VKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEXFNPYYGLFEYSATDNYTLQINP 122
Query: 63  MSAFVDNYH-----------------------------------EPVALSDLESLDNEFH 87
            S   +  H                                   + + L+D ES+D+E++
Sbjct: 123 NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKXXLGKQITLNDXESVDSEYY 182
Query: 88  QSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
            SL WI E+D T   LDL F + EE FGQ  + +LKP G  I VT +NK+ Y+
Sbjct: 183 NSLKWILENDPTE--LDLXFCIDEENFGQTYQVDLKPNGSEIXVTNENKREYI 233

>pdb|3OLM|A Chain A, Structure And Function Of A Ubiquitin Binding Site Within The Catalytic Domain Of A Hect Ubiquitin Ligase Length = 429

Iteration: 1
 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 99/174 (56%), Gaps = 36/174 (20%)
Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M  + +DL K +L  +FD E+GLDYGG SREFFFLLS ++FNP+Y LFEYSA D YT+QI
Sbjct: 93  MRQTPEDLKK-RLMIKFDGEEGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAYDNYTIQI 151
Query: 61  SPMSA------------------------FVDNY----------HEPVALSDLESLDNEF 86
           +P S                         F+D +           + V L D+E +D E 
Sbjct: 152 NPNSGINPEHLNYFKFIGRVVGLGVFHRRFLDAFFVGALYKMMLRKKVVLQDMEGVDAEV 211
Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           + SL W+ E+ + + VLDL F+  +E FG+    +LKP GRNI VT+ NKK YV
Sbjct: 212 YNSLNWMLENSI-DGVLDLTFSADDERFGEVVTVDLKPDGRNIEVTDGNKKEYV 264

>pdb|3TUG|A Chain A, Crystal Structure Of The Hect Domain Of Itch E3 Ubiquitin Ligase Length = 398

Iteration: 1
 Score =  123 bits (309), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 35/174 (20%)
Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M  S +DL + +L+  F  E+GLDYGG +RE+FFLLS ++ NP Y LFEY+  D Y +QI
Sbjct: 61  MSFSPQDLRR-RLWVIFPGEEGLDYGGVAREWFFLLSHEVSNPMYCLFEYAGKDNYCLQI 119
Query: 61  SPMS------------------------AFVDN----------YHEPVALSDLESLDNEF 86
           +P S                         F+D            ++PV L DLES+D EF
Sbjct: 120 NPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEF 179
Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           + SL+W+KE+++    L++ F+V +EI G+ K  +LKP G NI VTE+NK+ Y+
Sbjct: 180 YNSLIWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYI 233

>pdb|1ZVD|A Chain A, Regulation Of Smurf2 Ubiquitin Ligase Activity By Anchoring The E2 To The Hect Domain Length = 380

Iteration: 1
 Score =  114 bits (285), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 94/169 (55%), Gaps = 36/169 (21%)
Query: 6   KDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSA 65
           KDL K +L  +F  E+GLDYGG +RE+ +LLS +  NPYYGLF+YS +D YT+QI+P SA
Sbjct: 48  KDLWK-RLXIKFRGEEGLDYGGVAREWLYLLSHEXLNPYYGLFQYSRDDIYTLQINPDSA 106
Query: 66  ----------FVDN------YH------------------EPVALSDLESLDNEFHQSLL 91
                     FV        +H                  + + L D E +D + H SL+
Sbjct: 107 VNPEHLSYFHFVGRIXGXAVFHGHYIDGGFTLPFYKQLLGKSITLDDXELVDPDLHNSLV 166
Query: 92  WIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           WI E+D+T  VLD  F V    +G+  + ELKP G++I V E+NKK YV
Sbjct: 167 WILENDITG-VLDHTFCVEHNAYGEIIQHELKPNGKSIPVNEENKKEYV 214

>pdb|1ND7|A Chain A, Conformational Flexibility Underlies Ubiquitin Ligation Mediated By The Wwp1 Hect Domain E3 Ligase Length = 374

Iteration: 1
 Score =  112 bits (279), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 34/163 (20%)
Query: 12  KLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSA------ 65
           +LY  F  E+GLDYGG +RE+FFLLS ++ NP Y LFEY+  + Y +QI+P S       
Sbjct: 52  RLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHL 111
Query: 66  ------------------FVDN----------YHEPVALSDLESLDNEFHQSLLWIKEHD 97
                             F+D             + + + DLES+D EF+ SL+WI++++
Sbjct: 112 SYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNN 171
Query: 98  VTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           +    L++ F+V  EI G+    +LK GG NI VTE+NK  Y+
Sbjct: 172 IEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYI 214

>pdb|3H1D|A Chain A, Structure Of The Huwe1 Hect Domain Length = 405

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 84/165 (50%), Gaps = 34/165 (20%)
Query: 10  KCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMS----- 64
           K +LY  F+ E+G D GG  RE++ ++SR++FNP Y LF  S  D  T  I+P S     
Sbjct: 74  KNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHANPN 133
Query: 65  --------------AFVDN---------------YHEPVALSDLESLDNEFHQSLLWIKE 95
                         A  DN                 + V  +D+ES D  F+Q L+++ E
Sbjct: 134 HLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLE 193
Query: 96  HDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           +DV+    DL F+   + FG A+ R+LKP G NI VTE+NKK YV
Sbjct: 194 NDVSTLGYDLTFSTEVQEFGVAEVRDLKPNGANILVTEENKKEYV 238

>pdb|3G1N|A Chain A, Catalytic Domain Of The Human E3 Ubiquitin-Protein Ligase Huwe1 Length = 388

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 34/165 (20%)
Query: 10  KCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMS----- 64
           K +LY  F+ E+G D GG  RE++ ++SR++FNP Y LF  S  D  T  I+P S     
Sbjct: 57  KNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPN 116
Query: 65  --------------AFVDN---------------YHEPVALSDLESLDNEFHQSLLWIKE 95
                         A  DN                 + V  +D+ES D  F+Q L+++ E
Sbjct: 117 HLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLE 176
Query: 96  HDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           +DV+    DL F+   + FG  + R+LKP G NI VTE+NKK YV
Sbjct: 177 NDVSTLGYDLTFSTEVQEFGVCEVRDLKPNGANILVTEENKKEYV 221

>pdb|1C4Z|A Chain A, Structure Of E6ap: Insights Into Ubiquitination Pathway Length = 358

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 36/165 (21%)
Query: 10  KCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMS----- 64
           K +LY +F+ E G+D GG S+EFF L+  ++FNP  G+F Y  + T     +P S     
Sbjct: 35  KKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDES-TKLFWFNPSSFETEG 93
Query: 65  -----------AFVDN----YHEPVAL-----------SDLESLDNEFHQSL--LWIKEH 96
                      A  +N     H P+ +            DL       +QSL  L   E 
Sbjct: 94  QFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEG 153
Query: 97  DVTNEVLDLNFAVTE-EIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           +V ++++ + F +++ ++FG     +LK  G  I +T +N+K +V
Sbjct: 154 NVEDDMM-ITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFV 197

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	140
1zvd_A	380	SMAD ubiquitination regulatory factor 2; ubiquitin	2e-59
3h1d_A	405	E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT,	3e-58
2oni_A	392	E3 ubiquitin-protein ligase NEDD4-like protein; al	7e-58
1nd7_A	374	WW domain-containing protein 1; HECT, ubiquitin, l	5e-57
3olm_A	429	E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {S	2e-56
1c4z_A	358	E6AP, ubiquitin-protein ligase E3A; bilobal struct	5e-51

>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens} Length = 380

 Score =  187 bits (476), Expect = 2e-59
 Identities = 67/174 (38%), Positives = 94/174 (54%), Gaps = 36/174 (20%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M    KDL   +L  +F  E+GLDYGG +RE+ +LLS ++ NPYYGLF+YS +D YT+QI
Sbjct: 43  MKMRPKDL-WKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQI 101

Query: 61  SPMSAFVDN----------------YH------------------EPVALSDLESLDNEF 86
           +P SA                    +H                  + + L D+E +D + 
Sbjct: 102 NPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDL 161

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           H SL+WI E+D+T  VLD  F V    +G+  + ELKP G++I V E+NKK YV
Sbjct: 162 HNSLVWILENDIT-GVLDHTFCVEHNAYGEIIQHELKPNGKSIPVNEENKKEYV 214

>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A Length = 405

 Score =  184 bits (470), Expect = 3e-58
 Identities = 60/174 (34%), Positives = 87/174 (50%), Gaps = 35/174 (20%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
              S +++ K +LY  F+ E+G D GG  RE++ ++SR++FNP Y LF  S  D  T  I
Sbjct: 66  HRKSPEEM-KNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTI 124

Query: 61  SPMSAFVDN----------------YH------------------EPVALSDLESLDNEF 86
           +P S    N                Y                   + V  +D+ES D  F
Sbjct: 125 NPSSHANPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHF 184

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           +Q L+++ E+DV+    DL F+   + FG A+ R+LKP G NI VTE+NKK YV
Sbjct: 185 YQGLVYLLENDVSTLGYDLTFSTEVQEFGVAEVRDLKPNGANILVTEENKKEYV 238

>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A Length = 392

 Score =  183 bits (466), Expect = 7e-58
 Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 37/175 (21%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M   + D+ K +L+ +F+SE GLDYGG +RE+FFLLS+++FNPYYGLFEYSA D YT+QI
Sbjct: 61  MSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQI 120

Query: 61  SPMSAFVDNYH-----------------------------------EPVALSDLESLDNE 85
           +P S   +  H                                   + + L+D+ES+D+E
Sbjct: 121 NPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSE 180

Query: 86  FHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           ++ SL WI E+D T   LDL F + EE FGQ  + +LKP G  I VT +NK+ Y+
Sbjct: 181 YYNSLKWILENDPTE--LDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYI 233

>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A Length = 374

 Score =  180 bits (459), Expect = 5e-57
 Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 35/174 (20%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M     DL + +LY  F  E+GLDYGG +RE+FFLLS ++ NP Y LFEY+  + Y +QI
Sbjct: 42  MALKPYDL-RRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQI 100

Query: 61  SPMSAFVDN----------------YH------------------EPVALSDLESLDNEF 86
           +P S    +                +H                  + + + DLES+D EF
Sbjct: 101 NPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEF 160

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           + SL+WI+++++    L++ F+V  EI G+    +LK GG NI VTE+NK  Y+
Sbjct: 161 YNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYI 214

>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae} Length = 429

 Score =  180 bits (459), Expect = 2e-56
 Identities = 73/174 (41%), Positives = 96/174 (55%), Gaps = 36/174 (20%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M  + +DL K +L  +FD E+GLDYGG SREFFFLLS ++FNP+Y LFEYSA D YT+QI
Sbjct: 93  MRQTPEDL-KKRLMIKFDGEEGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAYDNYTIQI 151

Query: 61  SPMSAFVDN----------------YH------------------EPVALSDLESLDNEF 86
           +P S                     +H                  + V L D+E +D E 
Sbjct: 152 NPNSGINPEHLNYFKFIGRVVGLGVFHRRFLDAFFVGALYKMMLRKKVVLQDMEGVDAEV 211

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           + SL W+ E+ +   VLDL F+  +E FG+    +LKP GRNI VT+ NKK YV
Sbjct: 212 YNSLNWMLENSID-GVLDLTFSADDERFGEVVTVDLKPDGRNIEVTDGNKKEYV 264

>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A Length = 358

 Score =  164 bits (418), Expect = 5e-51
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 37/174 (21%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            + +  DL K +LY +F+ E G+D GG S+EFF L+  ++FNP  G+F Y    T     
Sbjct: 27  AMENPADL-KKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDE-STKLFWF 84

Query: 61  SPMSAFVDNY-------------------------------HEPVALSDLESLDNEFHQS 89
           +P S   +                                  +     DL       +QS
Sbjct: 85  NPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQS 144

Query: 90  LLWIKEH--DVTNEVLDLNFAVTE-EIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           L  + E+  +V  + + + F +++ ++FG     +LK  G  I +T +N+K +V
Sbjct: 145 LKDLLEYEGNVE-DDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFV 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	140
1zvd_A	380	SMAD ubiquitination regulatory factor 2; ubiquitin	100.0
3olm_A	429	E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {S	100.0
3h1d_A	405	E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT,	100.0
1nd7_A	374	WW domain-containing protein 1; HECT, ubiquitin, l	100.0
2oni_A	392	E3 ubiquitin-protein ligase NEDD4-like protein; al	100.0
1c4z_A	358	E6AP, ubiquitin-protein ligase E3A; bilobal struct	100.0

>1zvd_A SMAD ubiquitination regulatory factor 2; ubiquitin ligasecatalytic mechanism,X-RAY ligase; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.6e-39  Score=263.38  Aligned_cols=138  Identities=48%  Similarity=0.859  Sum_probs=125.9

Q ss_pred             CCCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcC---------
Q psy14612          1 MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH---------   71 (140)
Q Consensus         1 ~~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l---------   71 (140)
                      |.+++++| |++|+|+|.||+|+|+|||+||||+++++|+++|++|||++++++.++++|||.+..+++|+         
T Consensus        43 ~~~~~~~l-k~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~gLF~~~~~~~~~~~~np~s~~~~~~l~~f~flG~l  121 (380)
T 1zvd_A           43 MKMRPKDL-WKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRI  121 (380)
T ss_dssp             HTSCGGGG-GSEEEEEETTCCCSCHHHHHHHHHHHHHHHHTSGGGSSEEEETTEEEEEEECTTGGGSTTHHHHHHHHHHH
T ss_pred             HccCHHHh-cCceEEEECCCcCcCCCccHHHHHHHHHHHHcCCcCCCeeccCCCCeeeccCchhhcChHHHHHHHHhHHH
Confidence            35678899 58999999999999999999999999999999999999999988778889999886544432         


Q ss_pred             -------------------------CCCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCC
Q psy14612         72 -------------------------EPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGG  126 (140)
Q Consensus        72 -------------------------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G  126 (140)
                                               .+++++||+++||++|+||++|++++++ +.+++||+++.+.+|...++||+|||
T Consensus       122 ~g~al~~~~~ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~ll~~d~~-~~l~ltF~~~~~~~g~~~~veL~p~G  200 (380)
T 1zvd_A          122 MGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDIT-GVLDHTFCVEHNAYGEIIQHELKPNG  200 (380)
T ss_dssp             HHHHHHTTCCCCCCCCHHHHHHHTTCCCCSTTHHHHCHHHHHHHHHHHHSCCT-TTSCCCSEEEEEETTEEEEEESSTTC
T ss_pred             HHHHHhCCceeCCcCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhCCcc-ccccceeEEeeecCCcEeEEecCCCC
Confidence                                     1899999999999999999999999887 67999999999999999999999999


Q ss_pred             CccccCcchHhhcC
Q psy14612        127 RNIAVTEKNKKTYV  140 (140)
Q Consensus       127 ~~i~VT~~N~~eYV  140 (140)
                      ++|+||++||++||
T Consensus       201 ~~i~VT~~N~~eYv  214 (380)
T 1zvd_A          201 KSIPVNEENKKEYV  214 (380)
T ss_dssp             CCCCCTTTTHHHHH
T ss_pred             CCCccccccHHHHH
Confidence            99999999999997

>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-39  Score=265.63  Aligned_cols=137  Identities=52%  Similarity=0.874  Sum_probs=117.2

Q ss_pred             CCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcC----------
Q psy14612          2 LASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH----------   71 (140)
Q Consensus         2 ~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l----------   71 (140)
                      .+++.+| |++|+|+|.||+|+|+|||+||||+++++|+|+|++|||++++++++++++||.+...+.|+          
T Consensus        94 ~~~~~~l-k~~l~V~F~gE~G~D~GG~~rEff~ll~~elf~p~~gLF~~~~~~~~~~~~np~s~~~~~~l~~f~flG~li  172 (429)
T 3olm_A           94 RQTPEDL-KKRLMIKFDGEEGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAYDNYTIQINPNSGINPEHLNYFKFIGRVV  172 (429)
T ss_dssp             HSCHHHH-TSCEEEEEETTC--------CHHHHHHHHHHTCGGGSSEEESSSSSCCEEECGGGGGSTTHHHHHHHHHHHH
T ss_pred             hcChHhc-CcceEEEECCCCccCCChhHHHHHHHHHHHHcCccCCCceeeCCCCeeEeeCCcccCCHHHHHHHHHHHHHH
Confidence            3567889 68999999999999999999999999999999999999999887777889999886544433          


Q ss_pred             ------------------------CCCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCCC
Q psy14612         72 ------------------------EPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGR  127 (140)
Q Consensus        72 ------------------------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G~  127 (140)
                                              .+++++||+++||++|++|++|++++++ +.+++||+++.+.+|...++||+|||+
T Consensus       173 g~Al~~~~~ld~~f~~~f~k~Llg~~~~l~Dl~~~Dp~l~~sL~~ll~~d~~-~~l~l~F~~~~~~~g~~~~veL~p~G~  251 (429)
T 3olm_A          173 GLGVFHRRFLDAFFVGALYKMMLRKKVVLQDMEGVDAEVYNSLNWMLENSID-GVLDLTFSADDERFGEVVTVDLKPDGR  251 (429)
T ss_dssp             HHHHHTTCCCCCCBCHHHHHHHTTCCCCHHHHHHHCHHHHHHHHHHTTSCCT-TTCCCBSEEEEEETTEEEEEESSTTGG
T ss_pred             HHHHhcCCccCCCcCHHHHHhhcCCCCCHHHHHHHhHHHHHHHHHHHhCCHH-HhhcCceEEEeccCCceeeEeccCCCc
Confidence                                    1899999999999999999999999887 779999999999999999999999999


Q ss_pred             ccccCcchHhhcC
Q psy14612        128 NIAVTEKNKKTYV  140 (140)
Q Consensus       128 ~i~VT~~N~~eYV  140 (140)
                      +|+||++||++||
T Consensus       252 ~i~VT~~Nk~eYV  264 (429)
T 3olm_A          252 NIEVTDGNKKEYV  264 (429)
T ss_dssp             GSBCCTTTHHHHH
T ss_pred             ccccCchhHHHHH
Confidence            9999999999997

>3h1d_A E3 ubiquitin-protein ligase HUWE1; E3ligase, HECT, LOBE, alternative splicing, chromosomal rearrangement, cytoplasm, differentiation; 1.89A {Homo sapiens} PDB: 3g1n_A

Probab=100.00  E-value=9.8e-39  Score=262.46  Aligned_cols=138  Identities=43%  Similarity=0.677  Sum_probs=119.7

Q ss_pred             CCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcCC---------
Q psy14612          2 LASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYHE---------   72 (140)
Q Consensus         2 ~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l~---------   72 (140)
                      ..++.+| |++|+|+|.||+|+|+||++||||+++++|+|+|++|||+++++++++++|||.+..+++|+.         
T Consensus        67 ~~~~~~l-k~~l~V~F~gE~G~D~GG~~rEff~ll~~elf~p~~gLF~~~~~~~~~~~~np~s~~~~~~l~~f~flGrli  145 (405)
T 3h1d_A           67 RKSPEEM-KNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHANPNHLSYFKFVGRIV  145 (405)
T ss_dssp             TSCTTGG-GSEEEEEETTCCSCCCTTHHHHHHHHHHHHTTCGGGTSEEECSSCSSEEEECCC-----CHHHHHHHHHHHH
T ss_pred             ccCHHHh-hcceEEEECCCCCcCCChhHHHHHHHHHHHHhCCcccceeeccCCceeEeeCCccccChhHHHHHHHHhHHH
Confidence            4678899 689999999999999999999999999999999999999999887778889998754444431         


Q ss_pred             -------------------------CCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCCC
Q psy14612         73 -------------------------PVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGR  127 (140)
Q Consensus        73 -------------------------~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G~  127 (140)
                                               +++++||+++||++|+||++|++++++.-.+++||+++.+.+|...++||+|||+
T Consensus       146 G~Al~~~~~ld~~F~~~f~K~Llg~~~~l~DL~~~Dp~l~~sL~~ll~~~~~~l~l~ltF~~~~~~~G~~~~veL~p~G~  225 (405)
T 3h1d_A          146 AKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVAEVRDLKPNGA  225 (405)
T ss_dssp             HHHHHHTCCCCCEECHHHHHHHHTCCCCGGGHHHHCHHHHHHHHHHHHSCGGGSSSCEEEETTTCCEEECCGGGGSSCSS
T ss_pred             HHHHhCCCccCCCccHHHHHHhcCCCCCHHHHHHhhHHHHHHHhhhhcCChhhhcceeEEEEEeecCCceeeEeecCCCC
Confidence                                     8999999999999999999999998752247899998777788778899999999


Q ss_pred             ccccCcchHhhcC
Q psy14612        128 NIAVTEKNKKTYV  140 (140)
Q Consensus       128 ~i~VT~~N~~eYV  140 (140)
                      +|+||++||+|||
T Consensus       226 ~i~VT~~Nk~eYV  238 (405)
T 3h1d_A          226 NILVTEENKKEYV  238 (405)
T ss_dssp             EEECCTTTHHHHH
T ss_pred             CCccchHhHHHHH
Confidence            9999999999997

>1nd7_A WW domain-containing protein 1; HECT, ubiquitin, ligase, WWP1; 2.10A {Homo sapiens} SCOP: d.148.1.1 PDB: 3tug_A

Probab=100.00  E-value=2e-38  Score=258.46  Aligned_cols=139  Identities=44%  Similarity=0.821  Sum_probs=123.9

Q ss_pred             CCCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcC---------
Q psy14612          1 MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH---------   71 (140)
Q Consensus         1 ~~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l---------   71 (140)
                      |.+++.+| |++|+|+|.||+|+|+|||+||||+++++|+++|++|||++++++.+++++||.+...+.|+         
T Consensus        42 ~~~~~~~l-~~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l~~f~flG~l  120 (374)
T 1nd7_A           42 MALKPYDL-RRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRF  120 (374)
T ss_dssp             HTSCGGGG-GSEEEEEETTTCCCCCTHHHHHHHHHHHHHHTCGGGSSEEESSSSSCCEEECGGGGGSTTHHHHHHHHHHH
T ss_pred             HhcCHHhc-cceEEEEECCCCCcCCCccHHHHHHHHHHHHcCCccccccccCCCCceeccCCcccCCHHHHHHHHHHHHH
Confidence            35677888 68999999999999999999999999999999999999999887777889999875444332         


Q ss_pred             -------------------------CCCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCC
Q psy14612         72 -------------------------EPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGG  126 (140)
Q Consensus        72 -------------------------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G  126 (140)
                                               .+++++||+++||++|+||++|++++++.-++++||+++.+.+|...++||+|||
T Consensus       121 ig~al~~~~~ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~~~~~l~l~F~~~~~~~G~~~~veL~p~G  200 (374)
T 1nd7_A          121 IAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGG  200 (374)
T ss_dssp             HHHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHTTCHHHHHHHHHHHSSCSCSSCCCCBSEECCCSSTTCCCEESSTTG
T ss_pred             HHHHHhcCCeeCCcCCHHHHHHHhCCCCCHHHHHHhhHHHHHhhhhhccCChhhhhcceeEEEeeccCCceeeEecCCCC
Confidence                                     1899999999999999999999999886224899999998889988899999999


Q ss_pred             CccccCcchHhhcC
Q psy14612        127 RNIAVTEKNKKTYV  140 (140)
Q Consensus       127 ~~i~VT~~N~~eYV  140 (140)
                      ++|+||++||++||
T Consensus       201 ~~i~VT~~N~~eYv  214 (374)
T 1nd7_A          201 SNILVTEENKDEYI  214 (374)
T ss_dssp             GGCBCCTTTHHHHH
T ss_pred             cCceeccccHHHHH
Confidence            99999999999997

>2oni_A E3 ubiquitin-protein ligase NEDD4-like protein; alpha and beta protein (A + B), E3 ligase, HECT domain, UBL- conjugation pathway; HET: MSE; 2.20A {Homo sapiens} PDB: 3jvz_C 3jw0_C 2xbf_A 2xbb_A

Probab=100.00  E-value=1.2e-37  Score=255.12  Aligned_cols=135  Identities=51%  Similarity=0.937  Sum_probs=119.0

Q ss_pred             ChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCccc-ccCcC-----------
Q psy14612          4 SKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAF-VDNYH-----------   71 (140)
Q Consensus         4 ~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~-~~~~l-----------   71 (140)
                      ++.+++|++|.|+|.||+|+|+|||+||||+++++|+|+|++|||++++++.++++|||.+.. .++|+           
T Consensus        64 ~~~~~lk~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~gLF~~~~~~~~~~~~np~s~~~~~~~l~~f~flG~lig  143 (392)
T 2oni_A           64 KRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAG  143 (392)
T ss_dssp             SCGGGGGSEEEEEEC-CCSSCHHHHHHHHHHHHHHHHTCGGGSSEEESSTTCCCEEECTTHHHHCTTHHHHHHHHHHHHH
T ss_pred             CcHHhhCccEEEEECCCccccCCccHHHHHHHHHHHHcCcccCCceecCCCCceeccCCccccccHHHHHHHHhcchhhh
Confidence            334444789999999999999999999999999999999999999998877778899998642 22222           


Q ss_pred             -----------------------CCCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCCCc
Q psy14612         72 -----------------------EPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRN  128 (140)
Q Consensus        72 -----------------------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G~~  128 (140)
                                             .+++++||+++||++|+||++|+++++  ++++|||+++.+.+|...++||+|||++
T Consensus       144 ~Al~~~~~ld~~f~~~f~K~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~d~--~~l~L~F~v~~~~~G~~~~veL~p~G~~  221 (392)
T 2oni_A          144 LAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDP--TELDLMFCIDEENFGQTYQVDLKPNGSE  221 (392)
T ss_dssp             HHHHHTCCCSSCBCHHHHHHHTTCCCCTHHHHTTCHHHHHHHHHHHHSCC--GGGCCBSEEEEEETTEEEEEESSTTGGG
T ss_pred             hhhcCCcccCccchHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHhcCCh--hHceeeEEEeeecCCceeEEecCCCCcc
Confidence                                   189999999999999999999999876  5799999999999999999999999999


Q ss_pred             cccCcchHhhcC
Q psy14612        129 IAVTEKNKKTYV  140 (140)
Q Consensus       129 i~VT~~N~~eYV  140 (140)
                      |+||++||+|||
T Consensus       222 i~VT~~N~~eYv  233 (392)
T 2oni_A          222 IMVTNENKREYI  233 (392)
T ss_dssp             CBCCTTTHHHHH
T ss_pred             CccchhhHHHHH
Confidence            999999999997

>1c4z_A E6AP, ubiquitin-protein ligase E3A; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.148.1.1 PDB: 1d5f_A

Probab=100.00  E-value=5.8e-37  Score=248.66  Aligned_cols=136  Identities=30%  Similarity=0.520  Sum_probs=118.0

Q ss_pred             CChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCccccc--------------
Q psy14612          3 ASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVD--------------   68 (140)
Q Consensus         3 ~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~--------------   68 (140)
                      .++++| |++|+|+|.||+|+|+|||+||||+++++|+++|++|||+++++++ .+|+||.+....              
T Consensus        29 ~~~~~l-k~~l~V~F~gE~G~D~GG~~rEff~ll~~el~~p~~glF~~~~~~~-~~~~np~s~~~~~~f~flG~lig~Al  106 (358)
T 1c4z_A           29 ENPADL-KKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTK-LFWFNPSSFETEGQFTLIGIVLGLAI  106 (358)
T ss_dssp             SCGGGG-GSCCCEEETTCCCCCSSHHHHHHHHHHHHHHTSGGGCSEEEETTTT-EEEECTTCCSCHHHHHHHHHHHHHHH
T ss_pred             cCHHHh-cCceEEEECCCcCcCCCccHHHHHHHHHHHHcCCcCCceeecCCCC-eEeeCCccccchHHHHhHHHHHHHHH
Confidence            357888 6899999999999999999999999999999999999999987654 688999863211              


Q ss_pred             -------CcC----------CCCChhhHHhhCHHHHHHHHHHHhcCCCc-cceeeEEEEEe-eeCCeeEEEEccCCCCcc
Q psy14612         69 -------NYH----------EPVALSDLESLDNEFHQSLLWIKEHDVTN-EVLDLNFAVTE-EIFGQAKERELKPGGRNI  129 (140)
Q Consensus        69 -------~~l----------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~~-e~l~l~F~~~~-~~~G~~~~veL~~~G~~i  129 (140)
                             -++          .+++++||+++||++|+||++|++++.++ +.+++||+++. +.+|...++||+|||++|
T Consensus       107 ~~~~~ld~~f~~~f~k~llg~~~~l~Dl~~~Dp~l~~sL~~l~~~~~d~~~~l~ltF~~~~~~~~G~~~~~eL~p~G~~i  186 (358)
T 1c4z_A          107 YNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKI  186 (358)
T ss_dssp             HTTCCCCCCCCHHHHHHHTTCCCCHHHHHHHSHHHHHHHHHHHHCCSCHHHHTCCBSEEEECCTTTCCEEEESSTTTTTS
T ss_pred             HCCCCcCCcCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhcCCchhhhccceEEEeccccCCCeeeeecCCCCccc
Confidence                   111          18999999999999999999999976443 56999999985 678988999999999999


Q ss_pred             ccCcchHhhcC
Q psy14612        130 AVTEKNKKTYV  140 (140)
Q Consensus       130 ~VT~~N~~eYV  140 (140)
                      +||++||+|||
T Consensus       187 ~VT~~N~~eYv  197 (358)
T 1c4z_A          187 PITNENRKEFV  197 (358)
T ss_dssp             BCCTTTHHHHH
T ss_pred             ccccccHHHHH
Confidence            99999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	140
d1nd7a_	374	d.148.1.1 (A:) WW domain-containing protein 1, WWP	7e-33
d1c4za_	350	d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap)	3e-24

>d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 374

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: WW domain-containing protein 1, WWP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 7e-33
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 35/174 (20%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
           M     DL + +LY  F  E+GLDYGG +RE+FFLLS ++ NP Y LFEY+  + Y +QI
Sbjct: 42  MALKPYDL-RRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQI 100

Query: 61  SPMSAFVDNY----------------------------------HEPVALSDLESLDNEF 86
           +P S    ++                                   + + + DLES+D EF
Sbjct: 101 NPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEF 160

Query: 87  HQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGRNIAVTEKNKKTYV 140
           + SL+WI+++++    L++ F+V  EI G+    +LK GG NI VTE+NK  Y+
Sbjct: 161 YNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGSNILVTEENKDEYI 214

>d1c4za_ d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: Ubiquitin-protein ligase E3a (E6ap)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 3e-24
 Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 33/172 (19%)

Query: 1   MLASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQI 60
            + +  DL K +LY +F+ E G+D GG S+EFF L+  ++FNP  G+F Y  +       
Sbjct: 25  AMENPADL-KKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWFN 83

Query: 61  SPMSAFVDNYH------------------------------EPVALSDLESLDNEFHQSL 90
                    +                               +     DL       +QSL
Sbjct: 84  PSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSL 143

Query: 91  LWIKEHDVTNE-VLDLNFAVTE-EIFGQAKERELKPGGRNIAVTEKNKKTYV 140
             + E++   E  + + F +++ ++FG     +LK  G  I +T +N+K +V
Sbjct: 144 KDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFV 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	140
d1nd7a_	374	WW domain-containing protein 1, WWP1 {Human (Homo	100.0
d1c4za_	350	Ubiquitin-protein ligase E3a (E6ap) {Human (Homo s	99.97

>d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: WW domain-containing protein 1, WWP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-35  Score=236.58  Aligned_cols=138  Identities=43%  Similarity=0.817  Sum_probs=123.4

Q ss_pred             CCChhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccccCcC----------
Q psy14612          2 LASKKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFVDNYH----------   71 (140)
Q Consensus         2 ~~~~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~~~~l----------   71 (140)
                      .+++.+| |++|+|+|.||+|+|+|||+||||+++++|+++|++|||+.++++++++++||.+...++|+          
T Consensus        43 ~~~~~~l-~~~l~V~F~gE~g~D~GG~~rEff~~l~~el~~p~~~lf~~~~~~~~~~~~~p~~~~~~~~~~~f~~lG~li  121 (374)
T d1nd7a_          43 ALKPYDL-RRRLYVIFRGEEGLDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFI  121 (374)
T ss_dssp             TSCGGGG-GSEEEEEETTTCCCCCTHHHHHHHHHHHHHHTCGGGSSEEESSSSSCCEEECGGGGGSTTHHHHHHHHHHHH
T ss_pred             hcCHHHh-CCCeEEEECCCCccCCCccHHHHHHHHHHHHcCCccCCeeecCCCCcccccCCccccChhHHHHHHHhHHHH
Confidence            3577888 68999999999999999999999999999999999999999988888888999875433322          


Q ss_pred             ------------------------CCCChhhHHhhCHHHHHHHHHHHhcCCCccceeeEEEEEeeeCCeeEEEEccCCCC
Q psy14612         72 ------------------------EPVALSDLESLDNEFHQSLLWIKEHDVTNEVLDLNFAVTEEIFGQAKERELKPGGR  127 (140)
Q Consensus        72 ------------------------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~~e~l~l~F~~~~~~~G~~~~veL~~~G~  127 (140)
                                              .+++++||+++||++|++|+++++++++...++++|+++.+..|...++||+|||+
T Consensus       122 g~al~~~~~~~~~f~~~f~k~Llg~~~t~~DL~~iD~~~~~sl~~l~~~~~e~~~l~l~f~~~~~~~~~~~~~eL~~~G~  201 (374)
T d1nd7a_         122 AMALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLKLGGS  201 (374)
T ss_dssp             HHHHHTTCCCCCCCCHHHHHHHTTCCCCHHHHHTTCHHHHHHHHHHHSSCSCSSCCCCBSEECCCSSTTCCCEESSTTGG
T ss_pred             HHHHHcCcccCCCccHHHHHHhcCCCCCHHHHHHhCHHHHHhHHHHHhccccccccceeEEEEeecCCCcceeecCCCCC
Confidence                                    19999999999999999999999988765678999999988888888999999999


Q ss_pred             ccccCcchHhhcC
Q psy14612        128 NIAVTEKNKKTYV  140 (140)
Q Consensus       128 ~i~VT~~N~~eYV  140 (140)
                      +++||.+|+++||
T Consensus       202 ~~~VT~~N~~~yv  214 (374)
T d1nd7a_         202 NILVTEENKDEYI  214 (374)
T ss_dssp             GCBCCTTTHHHHH
T ss_pred             cccchHHHHHHHH
Confidence            9999999999996

>d1c4za_ d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Hect, E3 ligase catalytic domain
superfamily: Hect, E3 ligase catalytic domain
family: Hect, E3 ligase catalytic domain
domain: Ubiquitin-protein ligase E3a (E6ap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=213.03  Aligned_cols=134  Identities=31%  Similarity=0.538  Sum_probs=113.4

Q ss_pred             hhhhcccceEEEEecccccCCCCchHHHHHHHHHHhcCCCCCceEEecCCeeEEEeCCCcccc-----------------
Q psy14612          5 KKDLAKCKLYAQFDSEDGLDYGGPSREFFFLLSRQLFNPYYGLFEYSANDTYTVQISPMSAFV-----------------   67 (140)
Q Consensus         5 ~~~l~~~~l~V~F~gE~G~D~GG~~rE~~~~l~~el~~p~~~lF~~~~~~~~~~~~~p~s~~~-----------------   67 (140)
                      +.+| |++|+|+|.||+|+|+|||+||||+++++|+++|+.|||+.++++. .++++|.....                 
T Consensus        29 ~~~l-~~~~~V~F~gE~g~D~GG~~rE~~~~l~~el~~p~~~lf~~~~~~~-~~~~~~~~~~~~~~f~~lG~lig~al~~  106 (350)
T d1c4za_          29 PADL-KKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTK-LFWFNPSSFETEGQFTLIGIVLGLAIYN  106 (350)
T ss_dssp             GGGG-GSCCCEEETTCCCCCSSHHHHHHHHHHHHHHTSGGGCSEEEETTTT-EEEECTTCCSCHHHHHHHHHHHHHHHHT
T ss_pred             hHhc-CccEEEEecCCcccCCCcCHHHHHHHHHHHHcCCccCCccccCCCc-cccCCccchhhhhHHHHHHHHHHHHHHC
Confidence            4566 6899999999999999999999999999999999999999998764 56666654211                 


Q ss_pred             ----cCcC----------CCCChhhHHhhCHHHHHHHHHHHhcCCC-ccceeeEEEEEe-eeCCeeEEEEccCCCCcccc
Q psy14612         68 ----DNYH----------EPVALSDLESLDNEFHQSLLWIKEHDVT-NEVLDLNFAVTE-EIFGQAKERELKPGGRNIAV  131 (140)
Q Consensus        68 ----~~~l----------~~~~l~DL~~~Dp~~~~sL~~ll~~~~~-~e~l~l~F~~~~-~~~G~~~~veL~~~G~~i~V  131 (140)
                          +-.|          .+++++||+++||++|++|++|++++.+ .++++++|+++. +..|...++||+|||++++|
T Consensus       107 ~~~~~~~f~~~f~k~Llg~~~t~~Dl~~~D~~~~~sl~~l~~~~~~~~~~~~l~f~~~~~~~~g~~~~~eL~p~G~~~~V  186 (350)
T d1c4za_         107 NCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPI  186 (350)
T ss_dssp             TCCCCCCCCHHHHHHHTTCCCCHHHHHHHSHHHHHHHHHHHHCCSCHHHHTCCBSEEEECCTTTCCEEEESSTTTTTSBC
T ss_pred             CCCcCccCCHHHHHHHcCCCCcccchhhhCHHHHHHHHHHHHcCCchHhhcceeEEEecccCCCCeEEEEccCCCCcccc
Confidence                1111          1999999999999999999999987654 357899999985 45688899999999999999


Q ss_pred             CcchHhhcC
Q psy14612        132 TEKNKKTYV  140 (140)
Q Consensus       132 T~~N~~eYV  140 (140)
                      |.+|+.+||
T Consensus       187 t~~n~~~yv  195 (350)
T d1c4za_         187 TNENRKEFV  195 (350)
T ss_dssp             CTTTHHHHH
T ss_pred             cHHHHHHHH
Confidence            999999996