Psyllid ID: psy14648


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLMKILQTSSNQKIGRRRRGRKGKTAISLSKTKEW
cHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHEEEEEccHHHHHHHHHHHHHcccccccccEEEEEEEEEHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHcccccccccccc
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVgracnifplAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLhlefsdetrHVIITSTLIIVLVTTLVFGGSTMPLMKILQTSsnqkigrrrrgrkgktaislsktkew
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLmkilqtssnqkigrrrrgrkgktaislsktkew
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHviitstliivlvttlvFGGSTMPLMKILQTSSNQkigrrrrgrkgkTAISLSKTKEW
***YLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLMKIL*****************************
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLMKI******************************
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLMKILQTS**************************
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLMKILQTSSNQ***********************
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVKYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLMKILQTSSNQKIGRRRRGRKGKTAISLSKTKEW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query154 2.2.26 [Sep-21-2011]
Q4R8V4542 Sodium/hydrogen exchanger N/A N/A 0.896 0.254 0.537 7e-37
Q9Y2E8581 Sodium/hydrogen exchanger yes N/A 0.889 0.235 0.527 3e-36
Q4L208575 Sodium/hydrogen exchanger yes N/A 0.889 0.238 0.541 7e-36
Q8R4D1576 Sodium/hydrogen exchanger yes N/A 0.889 0.237 0.534 1e-35
Q5ZJ75574 Sodium/hydrogen exchanger yes N/A 0.889 0.238 0.527 3e-35
Q8BZ00 644 Sodium/hydrogen exchanger no N/A 0.753 0.180 0.389 6e-18
Q8IVB4 645 Sodium/hydrogen exchanger no N/A 0.753 0.179 0.389 6e-18
Q552S0 674 Sodium/hydrogen exchanger yes N/A 0.792 0.181 0.349 5e-16
Q92581 669 Sodium/hydrogen exchanger no N/A 0.876 0.201 0.317 1e-15
Q8BLV3 726 Sodium/hydrogen exchanger no N/A 0.753 0.159 0.355 2e-15
>sp|Q4R8V4|SL9A8_MACFA Sodium/hydrogen exchanger 8 OS=Macaca fascicularis GN=SLC9A8 PE=2 SV=1 Back     alignment and function desciption
 Score =  152 bits (385), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/145 (53%), Positives = 105/145 (72%), Gaps = 7/145 (4%)

Query: 10  SKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMM 69
           S+T VF   GL+IFSF H+ E + VIW ++L L GRA NIFPL+ L+N FR+H+IT +MM
Sbjct: 319 SETCVFAFLGLSIFSFPHKFEISFVIWCIVLVLFGRAVNIFPLSYLLNFFRDHKITPKMM 378

Query: 70  FIMWFSGLRGAISYALSLHLEFSD-ETRHVIITSTLIIVLVTTLVFGGSTMPLMKILQTS 128
           FIMWFSGLRGAI YALSLHL+    E R +I T+T++IVL T L+ GGSTMPL++++   
Sbjct: 379 FIMWFSGLRGAIPYALSLHLDLEPMEKRQLIGTTTIVIVLFTILLLGGSTMPLIRLMDIE 438

Query: 129 SNQKIGRRRRGRKGKTAISLSKTKE 153
             +    RRR +K    ++LSKT++
Sbjct: 439 DAKA---RRRNKKD---VNLSKTEK 457




Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.
Macaca fascicularis (taxid: 9541)
>sp|Q9Y2E8|SL9A8_HUMAN Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4 Back     alignment and function description
>sp|Q4L208|SL9A8_RAT Sodium/hydrogen exchanger 8 OS=Rattus norvegicus GN=Slc9a8 PE=2 SV=1 Back     alignment and function description
>sp|Q8R4D1|SL9A8_MOUSE Sodium/hydrogen exchanger 8 OS=Mus musculus GN=Slc9a8 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZJ75|SL9A8_CHICK Sodium/hydrogen exchanger 8 OS=Gallus gallus PE=2 SV=1 Back     alignment and function description
>sp|Q8BZ00|SL9A9_MOUSE Sodium/hydrogen exchanger 9 OS=Mus musculus GN=Slc9a9 PE=2 SV=1 Back     alignment and function description
>sp|Q8IVB4|SL9A9_HUMAN Sodium/hydrogen exchanger 9 OS=Homo sapiens GN=SLC9A9 PE=1 SV=1 Back     alignment and function description
>sp|Q552S0|NHE1_DICDI Sodium/hydrogen exchanger 1 OS=Dictyostelium discoideum GN=nhe1 PE=2 SV=1 Back     alignment and function description
>sp|Q92581|SL9A6_HUMAN Sodium/hydrogen exchanger 6 OS=Homo sapiens GN=SLC9A6 PE=1 SV=2 Back     alignment and function description
>sp|Q8BLV3|SL9A7_MOUSE Sodium/hydrogen exchanger 7 OS=Mus musculus GN=Slc9a7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query154
350406249 726 PREDICTED: sodium/hydrogen exchanger 8-l 0.928 0.196 0.772 5e-59
383853275 729 PREDICTED: sodium/hydrogen exchanger 8-l 0.928 0.196 0.779 7e-59
340716045 679 PREDICTED: sodium/hydrogen exchanger 8-l 0.928 0.210 0.772 7e-59
307213497 730 Sodium/hydrogen exchanger 8 [Harpegnatho 0.922 0.194 0.758 1e-58
328789038 608 PREDICTED: sodium/hydrogen exchanger 8, 0.928 0.235 0.765 2e-58
193666950 621 PREDICTED: sodium/hydrogen exchanger 8-l 0.922 0.228 0.772 3e-58
380018427 621 PREDICTED: sodium/hydrogen exchanger 8-l 0.928 0.230 0.758 4e-58
307187519 730 Sodium/hydrogen exchanger 8 [Camponotus 0.928 0.195 0.744 5e-58
322798700 724 hypothetical protein SINV_03720 [Solenop 0.928 0.197 0.744 5e-58
357624766 670 sodium/hydrogen exchanger 8 [Danaus plex 0.922 0.211 0.744 8e-57
>gi|350406249|ref|XP_003487707.1| PREDICTED: sodium/hydrogen exchanger 8-like [Bombus impatiens] Back     alignment and taxonomy information
 Score =  232 bits (591), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 112/145 (77%), Positives = 126/145 (86%), Gaps = 2/145 (1%)

Query: 10  SKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMM 69
           ++T VF   GLA+FSFRHRVEPALVIWS++LCL+GRA NIFPLA LVNRFREHQITR+MM
Sbjct: 468 AETCVFAYLGLALFSFRHRVEPALVIWSIVLCLIGRAANIFPLAFLVNRFREHQITRKMM 527

Query: 70  FIMWFSGLRGAISYALSLHLEFSDETRHVIITSTLIIVLVTTLVFGGSTMPLMKILQTSS 129
           FIMWFSGLRGAISYALSLHL+FSDETRHVIIT+TLIIVL TTL+FGGSTMPL+K L+   
Sbjct: 528 FIMWFSGLRGAISYALSLHLDFSDETRHVIITTTLIIVLFTTLIFGGSTMPLLKFLRAEK 587

Query: 130 NQKIGRRRRGRKGKTAISLSKTKEW 154
            QK   RR+ RK K  ISLSKT+EW
Sbjct: 588 KQKSNSRRK-RKDK-EISLSKTREW 610




Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853275|ref|XP_003702148.1| PREDICTED: sodium/hydrogen exchanger 8-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340716045|ref|XP_003396514.1| PREDICTED: sodium/hydrogen exchanger 8-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|307213497|gb|EFN88906.1| Sodium/hydrogen exchanger 8 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|328789038|ref|XP_397447.3| PREDICTED: sodium/hydrogen exchanger 8, partial [Apis mellifera] Back     alignment and taxonomy information
>gi|193666950|ref|XP_001944697.1| PREDICTED: sodium/hydrogen exchanger 8-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|380018427|ref|XP_003693130.1| PREDICTED: sodium/hydrogen exchanger 8-like, partial [Apis florea] Back     alignment and taxonomy information
>gi|307187519|gb|EFN72570.1| Sodium/hydrogen exchanger 8 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|322798700|gb|EFZ20298.1| hypothetical protein SINV_03720 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|357624766|gb|EHJ75420.1| sodium/hydrogen exchanger 8 [Danaus plexippus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query154
FB|FBgn0026787649 Nhe1 "Na[+]/H[+] hydrogen exch 0.941 0.223 0.493 7.3e-34
UNIPROTKB|B4DIV9281 SLC9A8 "cDNA FLJ61281, highly 0.746 0.409 0.525 3.5e-27
UNIPROTKB|B7Z3B1362 SLC9A8 "cDNA FLJ61631, highly 0.746 0.317 0.525 3.5e-27
ZFIN|ZDB-GENE-041212-7640 slc9a8 "solute carrier family 0.785 0.189 0.516 6.8e-27
UNIPROTKB|D4A210290 Slc9a8 "Sodium/hydrogen exchan 0.746 0.396 0.525 1.2e-26
UNIPROTKB|E2R7C3581 SLC9A8 "Sodium/hydrogen exchan 0.746 0.197 0.525 1.8e-26
UNIPROTKB|Q9Y2E8581 SLC9A8 "Sodium/hydrogen exchan 0.746 0.197 0.525 1.8e-26
UNIPROTKB|F1MWW1585 LOC617800 "Sodium/hydrogen exc 0.746 0.196 0.525 2.3e-26
RGD|1308193575 Slc9a8 "solute carrier family 0.746 0.2 0.525 6e-26
UNIPROTKB|Q4L208575 Slc9a8 "Sodium/hydrogen exchan 0.746 0.2 0.525 6e-26
FB|FBgn0026787 Nhe1 "Na[+]/H[+] hydrogen exchanger 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 374 (136.7 bits), Expect = 7.3e-34, P = 7.3e-34
 Identities = 78/158 (49%), Positives = 98/158 (62%)

Query:    10 SKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMM 69
             ++T VF   GLAIFSF+H+VE + VIW+++LCL+GRACNIFPLA LVN+FREH+I  +M 
Sbjct:   398 AETCVFAYLGLAIFSFKHQVELSFVIWAIVLCLIGRACNIFPLAFLVNKFREHKINNKMQ 457

Query:    70 FIMWFSGLRGAISYALSLHLEF-SDETRHXXXXXXXXXXXXXXXXFGGSTMPLMKILQ-- 126
             FIMWFSGLRGAISYALSLHL   S E RH                 GGSTMP++K L+  
Sbjct:   458 FIMWFSGLRGAISYALSLHLNLDSQEKRHVIITTTLIIVLFTTLVLGGSTMPVLKYLKPG 517

Query:   127 ----------TSSNQXXXXXXXXXXXXTAISLSKTKEW 154
                        ++ +             +ISLSKT+EW
Sbjct:   518 KKRRARGSGRNAAEEGGRRNGSGRKRSKSISLSKTREW 555




GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS;NAS
GO:0006885 "regulation of pH" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0006814 "sodium ion transport" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
UNIPROTKB|B4DIV9 SLC9A8 "cDNA FLJ61281, highly similar to Sodium/hydrogen exchanger 8" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z3B1 SLC9A8 "cDNA FLJ61631, highly similar to Sodium/hydrogen exchanger 8" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041212-7 slc9a8 "solute carrier family 9 (sodium/hydrogen exchanger), member 8" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|D4A210 Slc9a8 "Sodium/hydrogen exchanger 8" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R7C3 SLC9A8 "Sodium/hydrogen exchanger" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y2E8 SLC9A8 "Sodium/hydrogen exchanger 8" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MWW1 LOC617800 "Sodium/hydrogen exchanger" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1308193 Slc9a8 "solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q4L208 Slc9a8 "Sodium/hydrogen exchanger 8" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8R4D1SL9A8_MOUSENo assigned EC number0.53470.88960.2378yesN/A
Q9Y2E8SL9A8_HUMANNo assigned EC number0.52770.88960.2358yesN/A
Q4L208SL9A8_RATNo assigned EC number0.54160.88960.2382yesN/A
Q5ZJ75SL9A8_CHICKNo assigned EC number0.52770.88960.2386yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query154
TIGR00840 559 TIGR00840, b_cpa1, sodium/hydrogen exchanger 3 1e-16
COG0025429 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiport 6e-10
COG3263 574 COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antip 8e-04
>gnl|CDD|233147 TIGR00840, b_cpa1, sodium/hydrogen exchanger 3 Back     alignment and domain information
 Score = 75.6 bits (186), Expect = 1e-16
 Identities = 38/139 (27%), Positives = 78/139 (56%), Gaps = 4/139 (2%)

Query: 2   VKYLARTY---SKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNR 58
           +KY  +     S+TL+F+  G+++ +  H    A V+ +L  C++ R   +  L+ + N 
Sbjct: 288 IKYFMKMLSSLSETLIFIFLGVSLVTENHEWNWAFVVATLSFCVIYRVLGVRTLSWITNE 347

Query: 59  FREHQITRRMMFIMWFSGLRGAISYALSLHL-EFSDETRHVIITSTLIIVLVTTLVFGGS 117
           FR  +I  +   +++++GLRGA+++AL+L L E     + + +T+TL++V  T +  GG+
Sbjct: 348 FRPVEIPYKDQLVIFYAGLRGAVAFALALLLDEKIFPYKFLFVTTTLVVVFFTVIFQGGT 407

Query: 118 TMPLMKILQTSSNQKIGRR 136
             PL+++L+         +
Sbjct: 408 IKPLVEVLKVKKGCISKTK 426


The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36)The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals.Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in(1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles.This model is specific for the eukaryotic members members of this family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 559

>gnl|CDD|223104 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|225802 COG3263, COG3263, NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 154
TIGR00840 559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.94
KOG1966|consensus 670 99.94
KOG1965|consensus575 99.9
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.83
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.83
COG3263 574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.69
PRK05326 562 potassium/proton antiporter; Reviewed 99.62
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.14
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 98.45
KOG4505|consensus467 96.64
PRK03659 601 glutathione-regulated potassium-efflux system prot 94.96
COG0475397 KefB Kef-type K+ transport systems, membrane compo 92.5
PLN03159 832 cation/H(+) antiporter 15; Provisional 91.1
PRK10669 558 putative cation:proton antiport protein; Provision 90.3
PRK03562 621 glutathione-regulated potassium-efflux system prot 87.65
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
Probab=99.94  E-value=8.8e-27  Score=207.15  Aligned_cols=137  Identities=26%  Similarity=0.492  Sum_probs=124.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhhhhhhhhcchhHHH
Q psy14648          3 KYLARTYSKTLVFLITGLAIFSFRHRVEPALVIWSLILCLVGRACNIFPLAILVNRFREHQITRRMMFIMWFSGLRGAIS   82 (154)
Q Consensus         3 k~~la~l~e~~IFillGl~l~~~~~~~~~~~ii~~~v~~~vaR~v~v~~~~~~~~~~~~~~i~~~~~~v~~~~GlRGaVs   82 (154)
                      .+.+++++|+++|+++|++++...+.|++.++++++++|+++|+++|++++++.|++++.+++++||++++|+|+||+||
T Consensus       292 ~~~ls~l~e~~IFvlLGl~l~~~~~~~~~~~i~~~l~~~ll~R~l~V~~~~~~~~~~~~~~~~~~e~~il~w~GlRGaVa  371 (559)
T TIGR00840       292 MKMLSSLSETLIFIFLGVSLVTENHEWNWAFVVATLSFCVIYRVLGVRTLSWITNEFRPVEIPYKDQLVIFYAGLRGAVA  371 (559)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChhhhhheeeeccccHHH
Confidence            46789999999999999999777677888888888999999999999999999999887889999999999999999999


Q ss_pred             HHHHhhcccC-chhhHHHHHHHHHHHHHHHhhhhhcHHHHHHHhCCCCCccccccccc
Q psy14648         83 YALSLHLEFS-DETRHVIITSTLIIVLVTTLVFGGSTMPLMKILQTSSNQKIGRRRRG  139 (154)
Q Consensus        83 lALal~l~~~-~~~~~~i~~~t~~vVl~Tl~vqG~t~~~l~~~L~i~~~~~~~~~~~~  139 (154)
                      +|+|+.+|.+ .|+++.++++|+++|++|+++||+|++|++++|+++++++.++++++
T Consensus       372 ~aLAl~l~~~~~~~~~~i~~~t~~VVl~TvlvqG~T~~pl~~~L~l~~~~~~~~~~~e  429 (559)
T TIGR00840       372 FALALLLDEKIFPYKFLFVTTTLVVVFFTVIFQGGTIKPLVEVLKVKKGCISKTKINE  429 (559)
T ss_pred             HHHHHhCCCCCcchHHHHHHHHHeeehHHHHHHHhhHHHHHHHhCCCCCccchhhHHH
Confidence            9999998865 48999999999999999999999999999999999988876555443



This model is specific for the eukaryotic members members of this family.

>KOG1966|consensus Back     alignment and domain information
>KOG1965|consensus Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>KOG4505|consensus Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query154
2kbv_A28 Sodium/hydrogen exchanger 1; transmembrane, peptid 98.76
>2kbv_A Sodium/hydrogen exchanger 1; transmembrane, peptide, NHE1, micelle, alternative splicing, antiport, glycoprotein, ION transport, membrane; NMR {Synthetic} Back     alignment and structure
Probab=98.76  E-value=2e-09  Score=58.54  Aligned_cols=25  Identities=40%  Similarity=0.741  Sum_probs=23.1

Q ss_pred             hhhhhhhhhcchhHHHHHHHhhccc
Q psy14648         67 RMMFIMWFSGLRGAISYALSLHLEF   91 (154)
Q Consensus        67 ~~~~v~~~~GlRGaVslALal~l~~   91 (154)
                      ++|++|+|+|+||||++||++.+|.
T Consensus         2 ~~Q~i~~~~GLRGAvafaL~~~l~~   26 (28)
T 2kbv_A            2 KDQFIIAYGGLRGAIAFSLGYLLDK   26 (28)
T ss_dssp             CHHHHTTTTSSCHHHHHHHHHHHHH
T ss_pred             CceeEEEeecchHHHHHHHHHhccC
Confidence            5899999999999999999998764




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00