Psyllid ID: psy14697

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
FGGCGSSWVLPSSFCWFGDWCGYFGLWSGRIGPSGRLMSPMELISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAGIV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
fggcgsswvlpssfcwfgdwcgyfglwsgrigpsgrlmspmelisgnKVVTAVAVGAAVVVGYCLYfdkkrrsdplFKEKLKERRRKNRELLQQKNkrgipdlkdhSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTvcgqpnqllgvlqqtlppnVFNALIEklppagiv
Flexible Loop (DISEMBL)
fggcgsswVLPSSFCWFGDWCGYFGLWSGRIGPSGRLMSPMELISGNKVVTAVAVGAAVVVGYCLyfdkkrrsdplfkeklkerrrknrellqqknkrgipdlkdhSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEklppagiv
Low Complexity Region (SEG)
FGGCGSSWVLPSSFCWFGDWCGYFGLWSGRIGPSGRLMSPMELISGNKvvtavavgaavvvgYCLYFDKKRRSDPlfkeklkerrrknrellQQKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAGIV
Disordered region (IsUnstruct)
****GSSWVLPSSFCWFGDWCGYFGLWSGRIGPSGRLMSPMELISGNKVVTAVAVGAAVVVGYCLYFDK*************************************SAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIE********
Disordered Region (DISOPRED)
*****SSWVLPSSFCWFGDWCGYFGLWSGRIG*************GNKVVTAVAVGAAVVVGYCLYFDKKRRSD*********************************AVQQYFLQEIQLGETLLAA*DLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPA***
Disordered Region (DISEMBL)
FGGCGSSWVLPSSFCWFGDWCGYFGLWSGRIGPSGRLMSPMELISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAGIV
Disordered Region (DISPRO)
**GCGSSWVLPSSFCWFGDWCGYFGLWSGRIGPSGRLMSPMELISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQ****RGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPP****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
FGGCGSSWVLPSSFCWFGDWCGYFGLWSGRIGPSGRLMSPMELISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFxxxxxxxxxxxxxxxxxxxxxGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAGIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
Q6DH66	146	Mitochondrial import rece	yes	N/A	0.731	0.876	0.578	6e-31
Q8AVY0	147	Mitochondrial import rece	N/A	N/A	0.714	0.850	0.568	3e-29
Q6DFM9	147	Mitochondrial import rece	yes	N/A	0.731	0.870	0.554	3e-29
Q62760	145	Mitochondrial import rece	yes	N/A	0.714	0.862	0.576	5e-29
Q9DCC8	145	Mitochondrial import rece	yes	N/A	0.714	0.862	0.576	5e-29
Q5RA31	145	Mitochondrial import rece	yes	N/A	0.714	0.862	0.568	2e-28
Q15388	145	Mitochondrial import rece	yes	N/A	0.714	0.862	0.568	2e-28
A6H7B1	145	Mitochondrial import rece	yes	N/A	0.714	0.862	0.568	2e-28
Q19766	188	Mitochondrial import rece	yes	N/A	0.708	0.659	0.412	2e-25
A8Y3V5	188	Mitochondrial import rece	N/A	N/A	0.617	0.574	0.417	4e-21

>sp|Q6DH66|TM20B_DANRE Mitochondrial import receptor subunit TOM20 homolog B OS=Danio rerio GN=tomm20b PE=1 SV=1

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/128 (57%), Positives = 95/128 (74%)

Query: 43  LISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPD 102
           ++ G+    A  +GAA+ VGYC+YFD+KRRSDP +K KL+ERR+K +   ++     +PD
Sbjct: 1   MMGGSSSRIAAGLGAALFVGYCIYFDRKRRSDPNYKNKLRERRKKQKAAQEKAGLSRLPD 60

Query: 103 LKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVF 162
           LKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF
Sbjct: 61  LKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVF 120

Query: 163 NALIEKLP 170
             L+ KLP
Sbjct: 121 QMLLTKLP 128

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with tom22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the tom40 translocation pore.
Danio rerio (taxid: 7955)

>sp|Q8AVY0|TOM20_XENLA Mitochondrial import receptor subunit TOM20 homolog OS=Xenopus laevis GN=tomm20 PE=2 SV=1

 Score =  127 bits (320), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 92/125 (73%)

Query: 46  GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           G     A  V  A+++GYC+YFD+KRRSDP FK +L+E+RRK +   ++  +  +PDLKD
Sbjct: 5   GKTSAIAAGVCGALLLGYCIYFDRKRRSDPNFKNRLREKRRKQKIAKERAGQSRLPDLKD 64

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
             AVQ++FL+EIQLGE LLA GD + GV+HL NA+ +CGQP QLL VLQQTLPP VF  L
Sbjct: 65  AEAVQKFFLEEIQLGEELLAQGDFEKGVDHLTNAIAICGQPQQLLQVLQQTLPPPVFQML 124

Query: 166 IEKLP 170
           + KLP
Sbjct: 125 LTKLP 129

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with tom22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the tom40 translocation pore.

Xenopus laevis (taxid: 8355)

>sp|Q6DFM9|TOM20_XENTR Mitochondrial import receptor subunit TOM20 homolog OS=Xenopus tropicalis GN=tomm20 PE=2 SV=1

 Score =  127 bits (320), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/128 (55%), Positives = 93/128 (72%)

Query: 43  LISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPD 102
           ++ G     A  V  A+ +GYC+YFD+KRRSDP FK +L+E+RRK +   ++  +  +PD
Sbjct: 2   VVVGKTSAIAAGVCGALFLGYCIYFDRKRRSDPNFKNRLREKRRKQKIAKERAGQSRLPD 61

Query: 103 LKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVF 162
           LKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ +CGQP QLL VLQQTLPP VF
Sbjct: 62  LKDAEAVQKFFLEEIQLGEELLAQGDFEKGVDHLTNAIAICGQPQQLLQVLQQTLPPPVF 121

Query: 163 NALIEKLP 170
             L+ KLP
Sbjct: 122 QMLLTKLP 129

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with tom22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the tom40 translocation pore.

Xenopus tropicalis (taxid: 8364)

>sp|Q62760|TOM20_RAT Mitochondrial import receptor subunit TOM20 homolog OS=Rattus norvegicus GN=Tomm20 PE=1 SV=2

 Score =  127 bits (318), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 90/125 (72%)

Query: 46  GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           G     A  V  A+ +GYC+YFD+KRRSDP FK +L+ERR+K +   ++     +PDLKD
Sbjct: 3   GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
             AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L
Sbjct: 63  AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122

Query: 166 IEKLP 170
           + KLP
Sbjct: 123 LTKLP 127

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the TOM40 translocation pore.

Rattus norvegicus (taxid: 10116)

>sp|Q9DCC8|TOM20_MOUSE Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus GN=Tomm20 PE=1 SV=1

 Score =  127 bits (318), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 90/125 (72%)

Query: 46  GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           G     A  V  A+ +GYC+YFD+KRRSDP FK +L+ERR+K +   ++     +PDLKD
Sbjct: 3   GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
             AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L
Sbjct: 63  AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122

Query: 166 IEKLP 170
           + KLP
Sbjct: 123 LTKLP 127

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the TOM40 translocation pore.

Mus musculus (taxid: 10090)

>sp|Q5RA31|TOM20_PONAB Mitochondrial import receptor subunit TOM20 homolog OS=Pongo abelii GN=TOMM20 PE=2 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 90/125 (72%)

Query: 46  GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           G     A  V  A+ +GYC+YFD+KRRSDP FK +L+ERR+K +   ++     +PDLKD
Sbjct: 3   GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
             AVQ++FL+EIQLGE LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L
Sbjct: 63  AEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122

Query: 166 IEKLP 170
           + KLP
Sbjct: 123 LTKLP 127

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the TOM40 translocation pore.

Pongo abelii (taxid: 9601)

>sp|Q15388|TOM20_HUMAN Mitochondrial import receptor subunit TOM20 homolog OS=Homo sapiens GN=TOMM20 PE=1 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 90/125 (72%)

Query: 46  GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           G     A  V  A+ +GYC+YFD+KRRSDP FK +L+ERR+K +   ++     +PDLKD
Sbjct: 3   GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
             AVQ++FL+EIQLGE LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L
Sbjct: 63  AEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122

Query: 166 IEKLP 170
           + KLP
Sbjct: 123 LTKLP 127

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the TOM40 translocation pore.

Homo sapiens (taxid: 9606)

>sp|A6H7B1|TOM20_BOVIN Mitochondrial import receptor subunit TOM20 homolog OS=Bos taurus GN=TOMM20 PE=2 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 90/125 (72%)

Query: 46  GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           G     A  V  A+ +GYC+YFD+KRRSDP FK +L+ERR+K +   ++     +PDLKD
Sbjct: 3   GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
             AVQ++FL+EIQLGE LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L
Sbjct: 63  AEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122

Query: 166 IEKLP 170
           + KLP
Sbjct: 123 LTKLP 127

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the TOM40 translocation pore.

Bos taurus (taxid: 9913)

>sp|Q19766|TOM20_CAEEL Mitochondrial import receptor subunit TOM20 homolog OS=Caenorhabditis elegans GN=tomm-20 PE=1 SV=1

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 7/131 (5%)

Query: 47  NKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKR-------G 99
           + VV A  +  A  +GYC+YFD KR + P +K+K++++RR          +R        
Sbjct: 11  SNVVLAAGIAGAAFLGYCIYFDHKRINAPDYKDKIRQKRRAQAGAGGMAPRRPAAAGNDA 70

Query: 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPP 159
            PD+ D S +Q++FLQE+QLGE L+AAG++D G  H+ANA+ +CG+  QLL + QQTL  
Sbjct: 71  APDVTDPSQMQRFFLQEVQLGEELMAAGNVDEGAVHIANAVMLCGESQQLLSIFQQTLSE 130

Query: 160 NVFNALIEKLP 170
           + F A++++LP
Sbjct: 131 DQFRAVVQQLP 141

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore.

Caenorhabditis elegans (taxid: 6239)

>sp|A8Y3V5|TOM20_CAEBR Mitochondrial import receptor subunit TOM20 homolog OS=Caenorhabditis briggsae GN=tomm-20 PE=3 SV=1

 Score =  100 bits (250), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 7/115 (6%)

Query: 63  YCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRG-------IPDLKDHSAVQQYFLQ 115
           YC+YFD KR + P +K+K++++RR          +R         PD+ D S +Q++FLQ
Sbjct: 27  YCIYFDHKRINAPDYKDKIRQKRRAQAGSGGMAARRPPAGGNEMAPDVTDPSQMQRFFLQ 86

Query: 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
           E+QLGE L+AAG+++ G  H+ANA+ +CG+  QLL + QQTL    F A++++LP
Sbjct: 87  EVQLGEELMAAGNVEEGAVHIANAVMLCGESQQLLSIFQQTLSEEQFRAVVQQLP 141

Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with TOM22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the translocation pore.

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
322782671	153	hypothetical protein SINV_09567 [Solenop	0.782	0.895	0.564	4e-38
332016382	145	Mitochondrial import receptor subunit TO	0.742	0.896	0.578	1e-37
307195488	144	Mitochondrial import receptor subunit TO	0.72	0.875	0.593	2e-37
383862593	142	PREDICTED: mitochondrial import receptor	0.697	0.859	0.592	3e-37
307187697	143	Mitochondrial import receptor subunit TO	0.714	0.874	0.578	6e-37
410931531	145	PREDICTED: mitochondrial import receptor	0.708	0.855	0.579	3e-35
350400677	145	PREDICTED: mitochondrial import receptor	0.725	0.875	0.553	4e-35
340710926	145	PREDICTED: mitochondrial import receptor	0.725	0.875	0.553	5e-35
213972549	143	mitochondrial import receptor subunit TO	0.731	0.895	0.557	1e-34
48141950	145	PREDICTED: mitochondrial import receptor	0.725	0.875	0.553	2e-34

>gi|322782671|gb|EFZ10534.1| hypothetical protein SINV_09567 [Solenopsis invicta]

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 79/140 (56%), Positives = 103/140 (73%), Gaps = 3/140 (2%)

Query: 34  SGRLMSPMELISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQ 93
           +G L   M +IS   V  AV + A + VGYC YFD+KRRSDP FK+KL+ERR+  ++   
Sbjct: 2   NGDLYIRMTMISKTAVGIAVGI-AGIFVGYCFYFDQKRRSDPDFKKKLRERRKAKKQA-- 58

Query: 94  QKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVL 153
           QK+   IPDL+DH  VQ++FLQE+QLGE +LA G++D GVEHLANA+ VCGQP QLL VL
Sbjct: 59  QKSSSKIPDLRDHELVQKFFLQEVQLGEEMLACGEIDGGVEHLANAVAVCGQPAQLLTVL 118

Query: 154 QQTLPPNVFNALIEKLPPAG 173
           Q+TLPP +F  L+++LP  G
Sbjct: 119 QKTLPPPIFQILVQRLPVIG 138

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016382|gb|EGI57295.1| Mitochondrial import receptor subunit TOM20-like protein [Acromyrmex echinatior]

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 3/133 (2%)

Query: 41  MELISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGI 100
           M +IS   V  AV + A + VGYC YFD+KRRSDP FK+KL+ERR+  ++   QK    +
Sbjct: 1   MAMISKTAVGIAVGI-AGIFVGYCFYFDQKRRSDPDFKKKLRERRKAKKQA--QKTSSKM 57

Query: 101 PDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPN 160
           PDL+DH  VQ++FLQE+QLGE LLA G++D GVEHLANA+ VCGQP QLL VLQ+TLPP 
Sbjct: 58  PDLRDHELVQKFFLQEVQLGEELLACGEIDGGVEHLANAVAVCGQPAQLLTVLQKTLPPP 117

Query: 161 VFNALIEKLPPAG 173
           +F  L+++LP  G
Sbjct: 118 IFQILVQRLPVVG 130

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195488|gb|EFN77374.1| Mitochondrial import receptor subunit TOM20-like protein [Harpegnathos saltator]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 76/128 (59%), Positives = 97/128 (75%), Gaps = 2/128 (1%)

Query: 47  NKVVTAVAVG-AAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           +K    +AVG A + VGYC YFD+KRRSDP FK+KL+ERRR  ++  QQK    I DL+D
Sbjct: 3   SKAAMGLAVGIAGIFVGYCFYFDQKRRSDPDFKKKLRERRRAKKQA-QQKASTKILDLRD 61

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
           H  VQ++FLQE+QLGE +LA GD+D+G+EHLANA+ VCGQP QLL VLQ+TLP  VF  L
Sbjct: 62  HEMVQKFFLQEVQLGEEMLAYGDVDSGIEHLANAVAVCGQPTQLLQVLQKTLPLQVFQTL 121

Query: 166 IEKLPPAG 173
           +++LP  G
Sbjct: 122 VQRLPTVG 129

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862593|ref|XP_003706768.1| PREDICTED: mitochondrial import receptor subunit TOM20 homolog [Megachile rotundata]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 96/125 (76%), Gaps = 3/125 (2%)

Query: 47  NKVVTAVAVG-AAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           +K    +AVG A + VGYC YFD+KRRSDP FK+KL+ERR+  ++   QK    IPDLKD
Sbjct: 3   SKAAVGIAVGIAGIFVGYCFYFDQKRRSDPDFKKKLRERRKAKKQA--QKASSKIPDLKD 60

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
           H  VQ++FLQE+QLGE LL  GD++ G+EH+ANA+ VCGQP QLL VLQ+TLPP VF+ L
Sbjct: 61  HEVVQKFFLQEVQLGEELLTYGDIEGGIEHIANAVAVCGQPTQLLQVLQKTLPPQVFHLL 120

Query: 166 IEKLP 170
           +++LP
Sbjct: 121 LQRLP 125

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187697|gb|EFN72669.1| Mitochondrial import receptor subunit TOM20-like protein [Camponotus floridanus]

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/128 (57%), Positives = 97/128 (75%), Gaps = 3/128 (2%)

Query: 47  NKVVTAVAVG-AAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
           +K    +AVG A + VGYC YFD+KRRSDP FK+KL+ERRR  ++   QK    IPDL+D
Sbjct: 3   SKAAVGIAVGIAGIFVGYCFYFDQKRRSDPDFKKKLRERRRAKKQA--QKASSKIPDLRD 60

Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
           H  VQ++FLQE+QLGE +LA G+++ G+EHLANA+ VCGQP QLL VLQ+TLPP +F  L
Sbjct: 61  HELVQKFFLQEVQLGEEMLACGEIEGGIEHLANAVAVCGQPAQLLTVLQKTLPPPIFQIL 120

Query: 166 IEKLPPAG 173
           +++LP  G
Sbjct: 121 VQRLPMVG 128

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|410931531|ref|XP_003979149.1| PREDICTED: mitochondrial import receptor subunit TOM20 homolog [Takifugu rubripes]

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/126 (57%), Positives = 95/126 (75%), Gaps = 2/126 (1%)

Query: 50  VTAVAVGA--AVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHS 107
            +AV VGA  A++V YC+YFD+KRR++P FKEKL+ERRR+ R   ++     +PDLKD  
Sbjct: 5   TSAVVVGACGALLVAYCIYFDRKRRNEPHFKEKLRERRRQKRVAFEKSGLSELPDLKDPE 64

Query: 108 AVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIE 167
           AVQ++FLQEIQLGE  LAAG+L+ GV+HL NA+ VC QP +LL VLQQTLPP VF  ++ 
Sbjct: 65  AVQRFFLQEIQLGEEHLAAGELETGVDHLTNAIAVCEQPQKLLQVLQQTLPPPVFQMMLS 124

Query: 168 KLPPAG 173
           +LP  G
Sbjct: 125 RLPAVG 130

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350400677|ref|XP_003485919.1| PREDICTED: mitochondrial import receptor subunit TOM20 homolog [Bombus impatiens]

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 5/132 (3%)

Query: 41  MELISGNKVVTAVAVG-AAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRG 99
           M +IS  K    +AVG A + VGYC YFD+KRRSDP FK+KL+ERR+  ++   Q +   
Sbjct: 1   MTMIS--KAAVGIAVGIAGIFVGYCFYFDQKRRSDPDFKKKLRERRKAKKQA--QSSTSK 56

Query: 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPP 159
           I DLKDH  VQ++FLQE+QLGE +L  GD++ G+EHL NA+ VCGQP QLL VLQ+TLPP
Sbjct: 57  IQDLKDHEVVQRFFLQEVQLGEEMLTCGDVEGGIEHLGNAVAVCGQPAQLLQVLQKTLPP 116

Query: 160 NVFNALIEKLPP 171
            +F+ L+++L P
Sbjct: 117 QIFHLLLQRLQP 128

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710926|ref|XP_003394034.1| PREDICTED: mitochondrial import receptor subunit TOM20 homolog [Bombus terrestris]

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 5/132 (3%)

Query: 41  MELISGNKVVTAVAVG-AAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRG 99
           M +IS  K    +AVG A + VGYC YFD+KRRSDP FK+KL+ERR+  ++   Q +   
Sbjct: 1   MTMIS--KAAVGIAVGIAGIFVGYCFYFDQKRRSDPDFKKKLRERRKAKKQA--QSSTSK 56

Query: 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPP 159
           I DLKDH  VQ++FLQE+QLGE +L  GD++ G+EHL NA+ VCGQP QLL VLQ+TLPP
Sbjct: 57  IQDLKDHEVVQRFFLQEVQLGEEMLTCGDVEGGIEHLGNAVAVCGQPAQLLQVLQKTLPP 116

Query: 160 NVFNALIEKLPP 171
            +F+ L+++L P
Sbjct: 117 QIFHLLLQRLQP 128

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|213972549|ref|NP_001135431.1| mitochondrial import receptor subunit TOM20 homolog [Nasonia vitripennis]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/131 (55%), Positives = 97/131 (74%), Gaps = 3/131 (2%)

Query: 43  LISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPD 102
           +IS   V  AV V A + VGYC YFD+KRR+DP FK+KL+ERR+  +E   +K    +P+
Sbjct: 1   MISKTAVSLAVGV-AGIFVGYCFYFDQKRRNDPDFKKKLRERRKARKEA--RKVGSRVPN 57

Query: 103 LKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVF 162
           LKDH  VQ++F+QE+++GE LLA GDLD G EHLANA+ VCGQP+QLL VLQ +LPP V 
Sbjct: 58  LKDHDVVQKFFIQEVEMGEELLAQGDLDGGTEHLANAVAVCGQPHQLLQVLQNSLPPQVS 117

Query: 163 NALIEKLPPAG 173
           + L+++LP  G
Sbjct: 118 HLLLQRLPSTG 128

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48141950|ref|XP_397284.1| PREDICTED: mitochondrial import receptor subunit TOM20 homolog [Apis mellifera] gi|380022113|ref|XP_003694898.1| PREDICTED: mitochondrial import receptor subunit TOM20 homolog [Apis florea]

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 5/132 (3%)

Query: 41  MELISGNKVVTAVAVG-AAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRG 99
           M +IS  K    +AVG A + VGYC YFD+KRRSDP FK+KL+ERR+  ++   Q     
Sbjct: 1   MTMIS--KAAVGIAVGIAGIFVGYCFYFDQKRRSDPDFKKKLRERRKAKKQA--QNATSK 56

Query: 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPP 159
           I DLKDH  VQ++FLQE+QLGE +L+ GD++  VEHL NA+ VCGQP QLL VLQ+TLPP
Sbjct: 57  IQDLKDHEVVQRFFLQEVQLGEEMLSCGDIEGAVEHLGNAVAVCGQPAQLLQVLQKTLPP 116

Query: 160 NVFNALIEKLPP 171
            +F+ L+++L P
Sbjct: 117 QIFHLLLQRLQP 128

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
MGI|MGI:1915202	145	Tomm20 "translocase of outer m	0.617	0.744	0.555	1.7e-27
RGD|708467	145	Tomm20 "translocase of outer m	0.617	0.744	0.555	1.7e-27
UNIPROTKB|F1NW20	147	TOMM20 "Uncharacterized protei	0.617	0.734	0.546	4.5e-27
UNIPROTKB|A6H7B1	145	TOMM20 "Mitochondrial import r	0.617	0.744	0.546	4.5e-27
UNIPROTKB|Q15388	145	TOMM20 "Mitochondrial import r	0.617	0.744	0.546	4.5e-27
UNIPROTKB|F2Z4X6	146	TOMM20 "Uncharacterized protei	0.617	0.739	0.546	4.5e-27
UNIPROTKB|E2R2I1	145	TOMM20 "Uncharacterized protei	0.617	0.744	0.546	7.3e-27
FB|FBgn0036928	171	Tom20 "Translocase of outer me	0.622	0.637	0.540	9.4e-27
UNIPROTKB|G3N058	143	G3N058 "Uncharacterized protei	0.594	0.727	0.509	8e-21
UNIPROTKB|F1SSK3	152	TOMM20L "Uncharacterized prote	0.611	0.703	0.425	1.9e-19

MGI|MGI:1915202 Tomm20 "translocase of outer mitochondrial membrane 20 homolog (yeast)" [Mus musculus (taxid:10090)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/108 (55%), Positives = 72/108 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRRSDP                 ++     +PDLKD  AVQ++FL+EIQLGE 
Sbjct:    20 YCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEE 79

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    80 LLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP 127

GO:0005739 "mitochondrion" evidence=IDA

GO:0005740 "mitochondrial envelope" evidence=IDA

GO:0005741 "mitochondrial outer membrane" evidence=ISO

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=ISO

RGD|708467 Tomm20 "translocase of outer mitochondrial membrane 20 homolog (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/108 (55%), Positives = 72/108 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRRSDP                 ++     +PDLKD  AVQ++FL+EIQLGE 
Sbjct:    20 YCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEE 79

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    80 LLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP 127

GO:0005739 "mitochondrion" evidence=ISO

GO:0005740 "mitochondrial envelope" evidence=ISO

GO:0005741 "mitochondrial outer membrane" evidence=IDA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=NAS

GO:0006626 "protein targeting to mitochondrion" evidence=ISO;ISS

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=ISO;TAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=ISO;IDA

UNIPROTKB|F1NW20 TOMM20 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 59/108 (54%), Positives = 72/108 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRRSDP                 ++     +PDLKD  AVQ++FL+EIQLGE 
Sbjct:    22 YCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEE 81

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    82 LLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP 129

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|A6H7B1 TOMM20 "Mitochondrial import receptor subunit TOM20 homolog" [Bos taurus (taxid:9913)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 59/108 (54%), Positives = 72/108 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRRSDP                 ++     +PDLKD  AVQ++FL+EIQLGE 
Sbjct:    20 YCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEE 79

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    80 LLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP 127

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

UNIPROTKB|Q15388 TOMM20 "Mitochondrial import receptor subunit TOM20 homolog" [Homo sapiens (taxid:9606)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 59/108 (54%), Positives = 72/108 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRRSDP                 ++     +PDLKD  AVQ++FL+EIQLGE 
Sbjct:    20 YCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEE 79

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    80 LLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP 127

GO:0016021 "integral to membrane" evidence=IEA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=NAS;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IDA

GO:0051082 "unfolded protein binding" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=IDA;TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|F2Z4X6 TOMM20 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 59/108 (54%), Positives = 72/108 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRRSDP                 ++     +PDLKD  AVQ++FL+EIQLGE 
Sbjct:    21 YCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKDAEAVQKFFLEEIQLGEE 80

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    81 LLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP 128

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=IEA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

UNIPROTKB|E2R2I1 TOMM20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 59/108 (54%), Positives = 72/108 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRRSDP                 ++     +PDLKD  AVQ++FL+EIQLGE 
Sbjct:    20 YCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLCKLPDLKDAEAVQKFFLEEIQLGEE 79

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    80 LLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLP 127

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=IEA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

FB|FBgn0036928 Tom20 "Translocase of outer membrane 20" [Drosophila melanogaster (taxid:7227)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 60/111 (54%), Positives = 74/111 (66%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFDKKRRSDP                   K+  G+P+L DH A+++YFLQEIQLGET
Sbjct:    23 YCIYFDKKRRSDPEYKKKVRERRRRNKKTGTAKS--GVPNLNDHEAIERYFLQEIQLGET 80

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAG 173
             L+A GD ++GVEHLANA+ VCGQP +LL VLQ +LP  VF  LI K+   G
Sbjct:    81 LIARGDFESGVEHLANAIVVCGQPARLLQVLQSSLPAQVFAMLIVKMQEFG 131

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=ISS

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=ISS

GO:0006626 "protein targeting to mitochondrion" evidence=ISS

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|G3N058 G3N058 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 55/108 (50%), Positives = 67/108 (62%)

Query:    64 CLY-FDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             C + FD KRRS+P                 Q ++    PDLK   AVQ++FL+EIQLGE 
Sbjct:    21 CKFNFDHKRRSNPNFKNRLREKETEAC---QGESWAFQPDLKYAEAVQKFFLEEIQLGEE 77

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
             LLA G+ + GV+HL NA+  CGQP QLL VLQQTLPP VF  L+ KLP
Sbjct:    78 LLAQGEYEKGVDHLTNAIAACGQPQQLLQVLQQTLPPPVFQMLLTKLP 125

GO:0006605 "protein targeting" evidence=IEA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

UNIPROTKB|F1SSK3 TOMM20L "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 46/108 (42%), Positives = 64/108 (59%)

Query:    63 YCLYFDKKRRSDPXXXXXXXXXXXXXXXXXQQKNKRGIPDLKDHSAVQQYFLQEIQLGET 122
             YC+YFD+KRR DP                 + +  + + D   +  +Q+ FLQE+Q+GE 
Sbjct:    25 YCVYFDRKRRGDPAFKRRLREKRRAQQQKAEGRGAQ-LWDPAKNEKLQELFLQEVQMGEF 83

Query:   123 LLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
              L+ G+   GVEHL+NAL VCGQP +LL V + TLPP VF  L+ K+P
Sbjct:    84 WLSRGEHQMGVEHLSNALLVCGQPQELLKVFKHTLPPKVFEMLLHKIP 131

GO:0006605 "protein targeting" evidence=IEA

GO:0005742 "mitochondrial outer membrane translocase complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6H7B1	TOM20_BOVIN	No assigned EC number	0.568	0.7142	0.8620	yes	N/A
Q5RA31	TOM20_PONAB	No assigned EC number	0.568	0.7142	0.8620	yes	N/A
Q19766	TOM20_CAEEL	No assigned EC number	0.4122	0.7085	0.6595	yes	N/A
Q15388	TOM20_HUMAN	No assigned EC number	0.568	0.7142	0.8620	yes	N/A
Q9DCC8	TOM20_MOUSE	No assigned EC number	0.576	0.7142	0.8620	yes	N/A
Q62760	TOM20_RAT	No assigned EC number	0.576	0.7142	0.8620	yes	N/A
Q6DH66	TM20B_DANRE	No assigned EC number	0.5781	0.7314	0.8767	yes	N/A
Q6DFM9	TOM20_XENTR	No assigned EC number	0.5546	0.7314	0.8707	yes	N/A
O14225	TOM20_SCHPO	No assigned EC number	0.3255	0.6171	0.7105	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	175
TIGR00985	148	TIGR00985, 3a0801s04tom, mitochondrial import rece	3e-42
pfam02064	184	pfam02064, MAS20, MAS20 protein import receptor	1e-15

>gnl|CDD|233221 TIGR00985, 3a0801s04tom, mitochondrial import receptor subunit translocase of outer membrane 20 kDa subunit

 Score =  137 bits (347), Expect = 3e-42
 Identities = 60/140 (42%), Positives = 81/140 (57%), Gaps = 18/140 (12%)

Query: 49  VVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRK-------NRELLQQKNKRGI- 100
           VV A  + AA  +GY +YFD KRR+DP F++KL+ RR+K          L ++K ++ I 
Sbjct: 9   VVIAAGIAAAAFLGYAIYFDYKRRNDPDFRKKLRRRRKKQAGAEKQYGGLAKEKQRQRIR 68

Query: 101 ---------PDLKDHSAVQQYFLQEIQLGETLLAAGD-LDNGVEHLANALTVCGQPNQLL 150
                    PD  D S  + +FLQE+QLGE L+A G  +D G  H  NAL V  QP QLL
Sbjct: 69  PAAAGLAKAPDPTDPSEKEAFFLQEVQLGEELMAQGTNVDEGAVHFYNALKVYPQPQQLL 128

Query: 151 GVLQQTLPPNVFNALIEKLP 170
            + QQTLP  +F  +I +LP
Sbjct: 129 SIYQQTLPEPIFRLMIAQLP 148

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 148

>gnl|CDD|111006 pfam02064, MAS20, MAS20 protein import receptor

 Score = 70.5 bits (172), Expect = 1e-15
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 28/153 (18%)

Query: 46  GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKER-------------------RR 86
           G     A+A G+A+   Y +YFD KRR+DP F+++L++R                    +
Sbjct: 10  GLAATAAIAAGSAL--AYAIYFDYKRRNDPEFRKQLRQRAKEQAKMEEEAAEHAKEAKLQ 67

Query: 87  KNRELLQQKNKR-GIPDLKDHSAVQQYFLQEIQLGETL-LAAGDLDNGVEHLANALTVCG 144
           K RE L  +    G P   D    +  FL+ ++ GE L +  G   +       AL V  
Sbjct: 68  KIREFLDMEAAEDGFP--SDPDEKEATFLENVEAGEILGMDPGKAIDAALAFYKALKVYP 125

Query: 145 QPNQLLGVLQQTLPPNVFNALIEK---LPPAGI 174
           QP  L+G+  +++   + + + E     PPA I
Sbjct: 126 QPADLIGIYDKSIAEAILDIIAEMIAIDPPAKI 158

Length = 184

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PF02064	121	MAS20: MAS20 protein import receptor; InterPro: IP	100.0
TIGR00985	148	3a0801s04tom mitochondrial import receptor subunit	100.0
KOG4056|consensus	143		100.0
TIGR00990	615	3a0801s09 mitochondrial precursor proteins import	97.47
PF00515	34	TPR_1: Tetratricopeptide repeat; InterPro: IPR0014	94.54
PF07719	34	TPR_2: Tetratricopeptide repeat; InterPro: IPR0131	94.04
PF13428	44	TPR_14: Tetratricopeptide repeat	90.73
smart00028	34	TPR Tetratricopeptide repeats. Repeats present in	90.34
PF13371	73	TPR_9: Tetratricopeptide repeat	90.21
PF13176	36	TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_	89.45
PF13181	34	TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_	89.39
PF13414	69	TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A	88.33
PF14561	90	TPR_20: Tetratricopeptide repeat; PDB: 3QOU_A 2R5S	88.33
PRK10370	198	formate-dependent nitrite reductase complex subuni	83.98
PRK11677	134	hypothetical protein; Provisional	83.73
PRK13183	46	psbN photosystem II reaction center protein N; Pro	83.23

>PF02064 MAS20: MAS20 protein import receptor; InterPro: IPR002056 Virtually all mitochondrial precursors are imported via the same mechanism []: precursors first bind to receptors on the mitochondrial surface, then insert into the translocation channel in the outer membrane

Probab=100.00  E-value=9.3e-60  Score=366.74  Aligned_cols=121  Identities=50%  Similarity=0.899  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHhhhhheeccCCCCChhhHHHhHHHHHHhHHHHHHhhcCCCCCCCChHHHHHHHHHHHHhHhHHhhcCChh
Q psy14697         51 TAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLD  130 (175)
Q Consensus        51 ~~agvaga~flGYcIYFD~KRR~dP~FRKkLrerRrk~~~~~~~a~~~~~p~~~d~e~~E~fFl~eV~lGE~L~a~G~~~  130 (175)
                      +++|++|++|+|||||||||||||||||||||+|||+++++++.+....+|+++|++++|+|||+||++||+|+++|+++
T Consensus         1 ~~ag~a~~~~lgYciYFD~KRR~dP~frkkL~~rrk~~~~~~~~~~~~~~~~~~d~~~~e~~Fl~qV~lGE~L~~~G~~~   80 (121)
T PF02064_consen    1 IAAGVAAAAFLGYCIYFDYKRRSDPDFRKKLRERRKKQAKAQEQAKSEKLPDPNDPEEMERFFLQQVQLGEQLLAQGDYE   80 (121)
T ss_dssp             ------------------------------------------------SSSHHHHHHHHHHHHHHHHHHHHHHHHTT-HH
T ss_pred             ChHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHHHHHHHhhhhcccccCcCCHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence            47888999999999999999999999999999999988876556677889999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhcCC
Q psy14697        131 NGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPP  171 (175)
Q Consensus       131 eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kLp~  171 (175)
                      +|++||||||+|||||++||+|||+||||+||++|+++||+
T Consensus        81 ~aa~hf~nAl~V~~qP~~LL~i~q~tlP~~vf~~l~~~l~e  121 (121)
T PF02064_consen   81 EAAEHFYNALKVCPQPAELLQIYQKTLPPPVFEMLVQKLPE  121 (121)
T ss_dssp             HHHHHHHHHHHTSSSHHHHHHHHHHHS-HHHHHHHHHTS--
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHhhCCHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999999996

Many outer-membrane proteins participate in the early stages of import, four of which (MAS20, MAS22, MAS37 and MAS70) are components of the receptor. MAS20, which forms a subcomplex with MAS22, seems to interact with most or all mitochondrial precursors, suggesting that the protein binds directly to mitochondrial targeting sequences. The MAS37 and MAS70 components also form a subcomplex, the two subcomplexes possibly binding via their trans- membrane (TM) regions - the TM region of MAS70 promotes oligomerisation of attatched protein domains and shares sequence similarity with the TM region of MAS20 []. MAS20 is also known as TOM20.; GO: 0006605 protein targeting, 0006886 intracellular protein transport, 0005742 mitochondrial outer membrane translocase complex; PDB: 3AX3_A 3AWR_B 2V1S_A 3AX5_C 3AX2_C 1OM2_A 2V1T_B.

>TIGR00985 3a0801s04tom mitochondrial import receptor subunit translocase of outer membrane 20 kDa subunit

Probab=100.00  E-value=2.5e-58  Score=369.53  Aligned_cols=127  Identities=45%  Similarity=0.746  Sum_probs=116.3

Q ss_pred             hhhhHHHHHHHHHHHHHhhhhheeccCCCCChhhHHHhHHHHHHhHHHH--------HH---------hhcCCCCCCCCh
Q psy14697         44 ISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELL--------QQ---------KNKRGIPDLKDH  106 (175)
Q Consensus        44 ~~~~~~~~~agvaga~flGYcIYFD~KRR~dP~FRKkLrerRrk~~~~~--------~~---------a~~~~~p~~~d~  106 (175)
                      ++++++++++|++|++|+||||||||||||||||||+||+|||++++++        ++         ++....|+|+|+
T Consensus         4 ~~~~~~~~~ag~a~~~flgYciYFD~KRR~dPdFRkkLr~rr~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~d~   83 (148)
T TIGR00985         4 SNKSNVVIAAGIAAAAFLGYAIYFDYKRRNDPDFRKKLRRRRKKQAGAEKQYGGLAKEKQRQRIRPAAAGLAKAPDPTDP   83 (148)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCH
Confidence            5677888999999999999999999999999999999999998877431        10         234568999999


Q ss_pred             HHHHHHHHHHHHhHhHHhhcC-ChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhcC
Q psy14697        107 SAVQQYFLQEIQLGETLLAAG-DLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP  170 (175)
Q Consensus       107 e~~E~fFl~eV~lGE~L~a~G-~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kLp  170 (175)
                      +++|+|||+||++||+|+++| +.++|+.||||||+|||||++||+|||+|||++||+|||.++|
T Consensus        84 ~e~E~~Fl~eV~~GE~L~~~g~~~~ega~hf~nAl~Vc~qP~~LL~iyq~tlP~~Vf~~lia~~p  148 (148)
T TIGR00985        84 SEKEAFFLQEVQLGEELMAQGTNVDEGAVHFYNALKVYPQPQQLLSIYQQTLPEPIFRLMIAQLP  148 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhCCCHHHHHHHHHhhCCHHHHHHHHhhcC
Confidence            999999999999999999999 8999999999999999999999999999999999999999987

>KOG4056|consensus

Probab=100.00  E-value=8.7e-56  Score=352.09  Aligned_cols=132  Identities=50%  Similarity=0.831  Sum_probs=121.1

Q ss_pred             hhhhHHHHHHHHHHHHHhhhhheeccCCCCChhhHHHhHHHHHHhHHH---HHHhhcCC---CCCCCChHHHHHHHHHHH
Q psy14697         44 ISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNREL---LQQKNKRG---IPDLKDHSAVQQYFLQEI  117 (175)
Q Consensus        44 ~~~~~~~~~agvaga~flGYcIYFD~KRR~dP~FRKkLrerRrk~~~~---~~~a~~~~---~p~~~d~e~~E~fFl~eV  117 (175)
                      ...+++.+++|+||++|+||||||||||||||+|||+||+||+++..+   +++++.++   .|||+|++++|+|||+||
T Consensus         6 ~v~~~~vI~agiag~af~gYciYFd~KRrsdP~fk~~lr~rrk~q~~ae~a~~~~a~sk~~~~pd~~d~~~~E~~Fmqqv   85 (143)
T KOG4056|consen    6 PVLRTSVIAAGIAGLAFIGYCIYFDKKRRSDPDFKKKLRERRKKQASAELAKERAAASKADNIPDPSDAEEVEKFFMQQV   85 (143)
T ss_pred             chhhhHHHHHHHHHHHHHHHHhhcccccccChhHHHHHHHHHHHHhhcccccccchhhccccCCCCCCHHHHHHHHHHHH
Confidence            445667799999999999999999999999999999999999998843   34444555   999999999999999999


Q ss_pred             HhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhcCCCCCC
Q psy14697        118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAGIV  175 (175)
Q Consensus       118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kLp~~~i~  175 (175)
                      ++||+|+++|++++||+||||||.|||||++||+|||+||||+||++|+.+||.+.++
T Consensus        86 ~lGE~L~~qg~~e~ga~h~~nAi~vcgqpaqLL~vlq~tlp~~if~~i~~~l~~~~~~  143 (143)
T KOG4056|consen   86 QLGEELLAQGNEEEGAEHLANAIVVCGQPAQLLQVLQQTLPEAIFAMLLKKLPSASER  143 (143)
T ss_pred             HhHHHHHHccCHHHHHHHHHHHHhhcCCHHHHHHHHHhhCCHHHHHHHHHHhhcccCC
Confidence            9999999999999999999999999999999999999999999999999999998753

>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)

Probab=97.47  E-value=0.00049  Score=63.92  Aligned_cols=45  Identities=11%  Similarity=0.200  Sum_probs=39.6

Q ss_pred             ChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697        105 DHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQL  149 (175)
Q Consensus       105 d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L  149 (175)
                      ++++++.+...-..+|..+...|++++|+.+|.+||...|+|.-.
T Consensus       119 ~~~~~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~~~~~  163 (615)
T TIGR00990       119 SEEERKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPDPVYY  163 (615)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHH
Confidence            455778888888999999999999999999999999999987543

>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]

Probab=94.54  E-value=0.061  Score=31.34  Aligned_cols=29  Identities=24%  Similarity=0.410  Sum_probs=25.5

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQ  145 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq  145 (175)
                      ..+|..+...|++++|+.+|.+||.+.|+
T Consensus         5 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~   33 (34)
T PF00515_consen    5 YNLGNAYFQLGDYEEALEYYQRALELDPD   33 (34)
T ss_dssp             HHHHHHHHHTT-HHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHhCCchHHHHHHHHHHHHCcC
Confidence            46899999999999999999999999885

It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees; within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. ; GO: 0005515 protein binding; PDB: 3SF4_C 2LNI_A 1ELW_A 2C0M_A 1FCH_B 3R9A_B 2J9Q_A 2C0L_A 1KT1_A 3FWV_A ....

>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]

Probab=94.04  E-value=0.083  Score=30.28  Aligned_cols=29  Identities=21%  Similarity=0.384  Sum_probs=25.7

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQ  145 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq  145 (175)
                      ..+|..+...|++++|..||-+|+..+|+
T Consensus         5 ~~lg~~~~~~~~~~~A~~~~~~al~l~p~   33 (34)
T PF07719_consen    5 YYLGQAYYQLGNYEEAIEYFEKALELDPN   33 (34)
T ss_dssp             HHHHHHHHHTT-HHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHCcC
Confidence            46899999999999999999999999986

It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. This repeat includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by IPR001440 from INTERPRO.; PDB: 1XNF_B 3Q15_A 4ABN_A 1OUV_A 3U4T_A 3MA5_C 2KCV_A 2KCL_A 2XEV_A 3NF1_A ....

>PF13428 TPR_14: Tetratricopeptide repeat

Probab=90.73  E-value=0.64  Score=29.00  Aligned_cols=37  Identities=19%  Similarity=0.199  Sum_probs=32.6

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVL  153 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~Iy  153 (175)
                      ..+|+.+...|++++|...|-++|+.+|+-.+....|
T Consensus         5 ~~la~~~~~~G~~~~A~~~~~~~l~~~P~~~~a~~~L   41 (44)
T PF13428_consen    5 LALARAYRRLGQPDEAERLLRRALALDPDDPEAWRAL   41 (44)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHCcCCHHHHHHh
Confidence            5789999999999999999999999999887766544

>smart00028 TPR Tetratricopeptide repeats

Probab=90.34  E-value=0.36  Score=24.76  Aligned_cols=29  Identities=31%  Similarity=0.460  Sum_probs=25.0

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQ  145 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq  145 (175)
                      ..+|..+...|++++|+.+|.+++.+.|+
T Consensus         5 ~~~a~~~~~~~~~~~a~~~~~~~~~~~~~   33 (34)
T smart00028        5 YNLGNAYLKLGDYDEALEYYEKALELDPN   33 (34)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHccCCC
Confidence            46788899999999999999999988653

Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.

>PF13371 TPR_9: Tetratricopeptide repeat

Probab=90.21  E-value=0.66  Score=30.61  Aligned_cols=39  Identities=18%  Similarity=0.267  Sum_probs=34.6

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQ  155 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQq  155 (175)
                      ...|..+...|++++|...|-+++..+|++.+...+.++
T Consensus        33 ~~~a~~~~~~g~~~~A~~~l~~~l~~~p~~~~~~~~~a~   71 (73)
T PF13371_consen   33 LQRARCLFQLGRYEEALEDLERALELSPDDPDARALRAM   71 (73)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHCCCcHHHHHHHHh
Confidence            347889999999999999999999999999998887654

>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A

Probab=89.45  E-value=0.22  Score=30.13  Aligned_cols=32  Identities=25%  Similarity=0.468  Sum_probs=26.2

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      ..+|..+...|++++|++.+-+||.+..+|.+
T Consensus         3 ~~Lg~~~~~~g~~~~Ai~~y~~aL~l~~~~~~   34 (36)
T PF13176_consen    3 NNLGRIYRQQGDYEKAIEYYEQALALARDPED   34 (36)
T ss_dssp             HHHHHHHHHCT-HHHHHHHHHHHHHHHHHCT-
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhcccccC
Confidence            36899999999999999999999988776653

>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A

Probab=89.39  E-value=0.58  Score=26.88  Aligned_cols=28  Identities=25%  Similarity=0.395  Sum_probs=25.5

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCG  144 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcp  144 (175)
                      ..+|..+...|++++|..+|-+|+.+.|
T Consensus         5 ~~lg~~y~~~~~~~~A~~~~~~a~~~~~   32 (34)
T PF13181_consen    5 YNLGKIYEQLGDYEEALEYFEKALELNP   32 (34)
T ss_dssp             HHHHHHHHHTTSHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence            4689999999999999999999999876

...

>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A

Probab=88.33  E-value=0.78  Score=30.02  Aligned_cols=34  Identities=18%  Similarity=0.375  Sum_probs=28.8

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL  150 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL  150 (175)
                      ..+|..+...|++++|+.+|.+||.+.|+=.+++
T Consensus         7 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~   40 (69)
T PF13414_consen    7 YNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAY   40 (69)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence            4678999999999999999999999988655543

...

>PF14561 TPR_20: Tetratricopeptide repeat; PDB: 3QOU_A 2R5S_A 3QDN_B

Probab=88.33  E-value=1.1  Score=32.79  Aligned_cols=47  Identities=26%  Similarity=0.400  Sum_probs=36.5

Q ss_pred             CCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCCh------HHHHHHHhh
Q psy14697        102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQP------NQLLGVLQQ  155 (175)
Q Consensus       102 ~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP------~~LL~IyQq  155 (175)
                      +|+|++++       .++++.++..|++++|.++|-..++.-+..      ..||.||+-
T Consensus        18 ~P~D~~ar-------~~lA~~~~~~g~~e~Al~~Ll~~v~~dr~~~~~~ar~~ll~~f~~   70 (90)
T PF14561_consen   18 NPDDLDAR-------YALADALLAAGDYEEALDQLLELVRRDRDYEDDAARKRLLDIFEL   70 (90)
T ss_dssp             STT-HHHH-------HHHHHHHHHTT-HHHHHHHHHHHHCC-TTCCCCHHHHHHHHHHHH
T ss_pred             CCCCHHHH-------HHHHHHHHHCCCHHHHHHHHHHHHHhCccccccHHHHHHHHHHHH
Confidence            46787766       678999999999999999999999987766      677777763

>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional

Probab=83.98  E-value=13  Score=30.30  Aligned_cols=39  Identities=31%  Similarity=0.388  Sum_probs=33.3

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQ  155 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQq  155 (175)
                      ..+|..+...|++++|+.+|.+|++.-|+-.+++.-|-.
T Consensus        77 ~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~  115 (198)
T PRK10370         77 ALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALAT  115 (198)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence            668999999999999999999999999987777655433

>PRK11677 hypothetical protein; Provisional

Probab=83.73  E-value=9.5  Score=30.60  Aligned_cols=36  Identities=17%  Similarity=0.216  Sum_probs=28.0

Q ss_pred             HHHHHHHHHHHHhHhHHhhcCChhhHHHHHHH-HHHhcC
Q psy14697        107 SAVQQYFLQEIQLGETLLAAGDLDNGVEHLAN-ALTVCG  144 (175)
Q Consensus       107 e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~n-Al~Vcp  144 (175)
                      .++...|.+-.+|=+.|.  .+|.+=-.|+++ |-.+||
T Consensus        50 qeV~~HFa~TA~Ll~~L~--~~Y~~Ly~HlA~~s~~Llp   86 (134)
T PRK11677         50 QELVSHFARSAELLDTMA--KDYRQLYQHMAKSSSELLP   86 (134)
T ss_pred             HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcc
Confidence            357889998888877776  467788889977 667777

>PRK13183 psbN photosystem II reaction center protein N; Provisional

Probab=83.23  E-value=1  Score=30.46  Aligned_cols=25  Identities=8%  Similarity=0.215  Sum_probs=18.0

Q ss_pred             hhhhhHHHHHHHHHHHHHhhhhhee
Q psy14697         43 LISGNKVVTAVAVGAAVVVGYCLYF   67 (175)
Q Consensus        43 m~~~~~~~~~agvaga~flGYcIYF   67 (175)
                      |-+.+.+++..+....+++||+||=
T Consensus         4 me~A~~~~i~i~~lL~~~TgyaiYt   28 (46)
T PRK13183          4 MSPALSLAITILAILLALTGFGIYT   28 (46)
T ss_pred             cchhHHHHHHHHHHHHHHhhheeee
Confidence            3456666666666667899999993

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	175
1om2_A	95	Solution Nmr Structure Of The Mitochondrial Protein		2e-15
2v1s_A	73	Crystal Structure Of Rat Tom20-Aldh Presequence Com		2e-13
2v1t_A	73	Crystal Structure Of Rat Tom20-Aldh Presequence Com		2e-13
3ax3_A	73	Crystal Structure Of Rat Tom20-Aldh Presequence Com		2e-12

>pdb|1OM2|A Chain A, Solution Nmr Structure Of The Mitochondrial Protein Import Receptor Tom20 From Rat In A Complex With A Presequence Peptide Derived From Rat Aldehyde Dehydrogenase (Aldh) Length = 95

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 57/71 (80%)
Query: 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPP 159
           +PDLKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP
Sbjct: 7   LPDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPP 66
Query: 160 NVFNALIEKLP 170
            VF  L+ KLP
Sbjct: 67  PVFQMLLTKLP 77

>pdb|2V1S|A Chain A, Crystal Structure Of Rat Tom20-Aldh Presequence Complex Length = 73

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNV 161
           DLKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP V
Sbjct: 6   DLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPV 65
Query: 162 FNALIEKL 169
           F  L+ KL
Sbjct: 66  FQMLLTKL 73

>pdb|2V1T|A Chain A, Crystal Structure Of Rat Tom20-Aldh Presequence Complex Length = 73

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 54/68 (79%)
Query: 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNV 161
           DLKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP V
Sbjct: 6   DLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPV 65
Query: 162 FNALIEKL 169
           F  L+ KL
Sbjct: 66  FQXLLTKL 73

>pdb|3AX3|A Chain A, Crystal Structure Of Rat Tom20-Aldh Presequence Complex: A Complex (Form2) Between Tom20 And A Disulfide-Bridged Presequence Peptide Containing D-Cys And L-Cys At The I And I+3 Positions. Length = 73

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 53/68 (77%)
Query: 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNV 161
           DLKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ V GQP QLL VLQQTLPP V
Sbjct: 6   DLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVSGQPQQLLQVLQQTLPPPV 65
Query: 162 FNALIEKL 169
           F  L+ KL
Sbjct: 66  FQMLLTKL 73

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	175
1om2_A	95	Protein (mitochondrial import receptor subunit TOM	6e-35
3ax2_A	73	Mitochondrial import receptor subunit TOM20 homol;	8e-34
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1 Length = 95

 Score =  116 bits (293), Expect = 6e-35
 Identities = 49/80 (61%), Positives = 58/80 (72%)

Query: 94  QKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVL 153
           +     +PDLKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VL
Sbjct: 1   RAGLSKLPDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 60

Query: 154 QQTLPPNVFNALIEKLPPAG 173
           QQTLPP VF  L+ KLP   
Sbjct: 61  QQTLPPPVFQMLLTKLPTIS 80

>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A Length = 73

 Score =  113 bits (285), Expect = 8e-34
 Identities = 47/69 (68%), Positives = 54/69 (78%)

Query: 101 PDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPN 160
            DLKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP 
Sbjct: 5   SDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPP 64

Query: 161 VFNALIEKL 169
           VF  L+ KL
Sbjct: 65  VFQMLLTKL 73

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 56/194 (28%)

Query: 2   GGCGSSW----VLPSS--FCWFGDWCGYFGLW--SGRIGPSGRLMSPMELISGNKVVTAV 53
            G G +W    V  S    C        F  W           ++  ++ +         
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDF--KIF--WLNLKNCNSPETVLEMLQKL--------- 205

Query: 54  AVGAAVVVGYCLYFDKK--RRSDPLFKEKLK---ERRRKNRELLQQKNKRGIPDLKD--H 106
                         D     RSD     KL+    +    R L  +  +  +  L +  +
Sbjct: 206 ----------LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255

Query: 107 SAVQQYF------L---QEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTL 157
           +     F      L   +  Q+ + L AA      ++H +  LT    P+++  +L    
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT----PDEVKSLLL--- 308

Query: 158 PPNVFNALIEKLPP 171
                +   + LP 
Sbjct: 309 --KYLDCRPQDLPR 320

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
3ax2_A	73	Mitochondrial import receptor subunit TOM20 homol;	100.0
1om2_A	95	Protein (mitochondrial import receptor subunit TOM	99.98
4gcn_A	127	Protein STI-1; structural genomics, PSI-biology, m	89.87
4gco_A	126	Protein STI-1; structural genomics, PSI-biology, m	89.77
3gyz_A	151	Chaperone protein IPGC; asymmetric homodimer, tetr	88.91
2kc7_A	99	BFR218_protein; tetratricopeptide repeat, all-alph	86.51
4gco_A	126	Protein STI-1; structural genomics, PSI-biology, m	85.87
4gcn_A	127	Protein STI-1; structural genomics, PSI-biology, m	85.7
2kc7_A	99	BFR218_protein; tetratricopeptide repeat, all-alph	85.68
3k9i_A	117	BH0479 protein; putative protein binding protein,	85.45
2l6j_A	111	TPR repeat-containing protein associated with HSP;	85.08
3vtx_A	184	MAMA; tetratricopeptide repeats (TPR) containing p	84.65
2vgx_A	148	Chaperone SYCD; alternative dimer assembly, tetrat	84.27
2r5s_A	176	Uncharacterized protein VP0806; APC090868.1, vibri	83.91
1a17_A	166	Serine/threonine protein phosphatase 5; hydrolase,	83.43
1na3_A	91	Designed protein CTPR2; de novo protein; HET: IPT;	83.23
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	83.16
1na3_A	91	Designed protein CTPR2; de novo protein; HET: IPT;	82.77
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	82.43
2xcb_A	142	PCRH, regulatory protein PCRH; protein transport,	81.29
2dba_A	148	Smooth muscle cell associated protein-1, isoform 2	81.07
2xev_A	129	YBGF; tetratricopeptide, alpha-helical, metal bind	80.99
2dba_A	148	Smooth muscle cell associated protein-1, isoform 2	80.68
1elw_A	118	TPR1-domain of HOP; HOP, TPR-domain, peptide-compl	80.29
2l6j_A	111	TPR repeat-containing protein associated with HSP;	80.23

>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A

Probab=100.00  E-value=8.5e-34  Score=203.54  Aligned_cols=72  Identities=65%  Similarity=1.003  Sum_probs=68.9

Q ss_pred             CCCCCCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhc
Q psy14697         98 RGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKL  169 (175)
Q Consensus        98 ~~~p~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kL  169 (175)
                      +.+|+|+|+|++|+||++||++||+|+++|++++|+.||||||+|||||++||+|||+||||+||++|++||
T Consensus         2 ~~~p~~~d~e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~tlP~~vf~~Li~kl   73 (73)
T 3ax2_A            2 PLGSDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKL   73 (73)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHSCHHHHHHHHHHC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHHHHHHHHHhC
Confidence            457899999999999999999999999999999999999999999999999999999999999999999986

>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1

Probab=99.98  E-value=2.7e-33  Score=209.75  Aligned_cols=78  Identities=63%  Similarity=1.029  Sum_probs=74.9

Q ss_pred             hcCCCCCCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhcCCCC
Q psy14697         96 NKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAG  173 (175)
Q Consensus        96 ~~~~~p~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kLp~~~  173 (175)
                      +.+++|+|+|++++|+||++||++||.|+++|++++|+.||||||+|||||++||+|||+||||+||++|+++||+++
T Consensus         3 ~~~~~p~~~d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP~~Vf~~Li~~l~~~~   80 (95)
T 1om2_A            3 GLSKLPDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTIS   80 (95)
T ss_dssp             CCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCCHHHHHHHHHSCSHH
T ss_pred             ccccCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999999999999999999999999999999999999999763

>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}

Probab=89.87  E-value=0.74  Score=32.17  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=23.7

Q ss_pred             HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      +-.+|..+..+|++++|+.+|-+||.+.|+-..
T Consensus        11 ~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~   43 (127)
T 4gcn_A           11 EKDLGNAAYKQKDFEKAHVHYDKAIELDPSNIT   43 (127)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence            345777777777777788888788777766443

>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}

Probab=89.77  E-value=0.78  Score=32.20  Aligned_cols=27  Identities=19%  Similarity=0.321  Sum_probs=13.9

Q ss_pred             hHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697        119 LGETLLAAGDLDNGVEHLANALTVCGQ  145 (175)
Q Consensus       119 lGE~L~a~G~~~eaa~hf~nAl~Vcpq  145 (175)
                      +|..+..+|++++|+.+|-+||...|+
T Consensus        19 ~G~~~~~~g~~~~A~~~~~~al~~~p~   45 (126)
T 4gco_A           19 KGNEYFKKGDYPTAMRHYNEAVKRDPE   45 (126)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence            455555555555555555555555443

>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A

Probab=88.91  E-value=0.73  Score=34.21  Aligned_cols=31  Identities=10%  Similarity=0.057  Sum_probs=27.2

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN  147 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~  147 (175)
                      ..+|..+...|++++|..+|-+|+...|++.
T Consensus       108 ~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~  138 (151)
T 3gyz_A          108 FHTGQCQLRLKAPLKAKECFELVIQHSNDEK  138 (151)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence            4689999999999999999999999998875

>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}

Probab=86.51  E-value=0.51  Score=30.43  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=28.3

Q ss_pred             HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697        116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL  150 (175)
Q Consensus       116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL  150 (175)
                      ...+|..+...|++++|..+|-+|+...|+-.+..
T Consensus        38 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~   72 (99)
T 2kc7_A           38 YYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ   72 (99)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence            34578888888999999999999999988776655

>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}

Probab=85.87  E-value=1.2  Score=31.23  Aligned_cols=39  Identities=15%  Similarity=0.151  Sum_probs=27.7

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQ  155 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQq  155 (175)
                      ..+|..+...|++++|..+|-+||.+.|+=.+...-+.+
T Consensus        85 ~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~  123 (126)
T 4gco_A           85 IRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRN  123 (126)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence            456777777778888888888888877776666555443

>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}

Probab=85.70  E-value=1.2  Score=31.10  Aligned_cols=33  Identities=18%  Similarity=0.323  Sum_probs=29.3

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL  149 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L  149 (175)
                      ..+|..+...|++++|+.+|-+||.+.|+|..+
T Consensus        87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~~~~~  119 (127)
T 4gcn_A           87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELV  119 (127)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHSCCHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhhCcCHHHH
Confidence            468999999999999999999999999998543

>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}

Probab=85.68  E-value=0.77  Score=29.54  Aligned_cols=33  Identities=18%  Similarity=0.325  Sum_probs=27.3

Q ss_pred             HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      .+.+|..+...|++++|+..|-+|+...|+-..
T Consensus         3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~   35 (99)
T 2kc7_A            3 QLKTIKELINQGDIENALQALEEFLQTEPVGKD   35 (99)
T ss_dssp             THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH
Confidence            467888888889999999999999988887555

>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}

Probab=85.45  E-value=1.2  Score=29.95  Aligned_cols=29  Identities=24%  Similarity=0.303  Sum_probs=14.5

Q ss_pred             HhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697        118 QLGETLLAAGDLDNGVEHLANALTVCGQP  146 (175)
Q Consensus       118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP  146 (175)
                      .+|..+...|++++|+.+|-+|+...|+-
T Consensus        32 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~   60 (117)
T 3k9i_A           32 GLGSTFRTLGEYRKAEAVLANGVKQFPNH   60 (117)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence            44445555555555555555555554443

>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}

Probab=85.08  E-value=1.4  Score=28.19  Aligned_cols=30  Identities=10%  Similarity=0.196  Sum_probs=22.3

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQP  146 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP  146 (175)
                      ..+|..+...|++++|..+|-+|+...|+-
T Consensus        42 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~   71 (111)
T 2l6j_A           42 SNKAMALIKLGEYTQAIQMCQQGLRYTSTA   71 (111)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence            356777777777878888888888777764

>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A

Probab=84.65  E-value=1.1  Score=31.78  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=19.2

Q ss_pred             HhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697        118 QLGETLLAAGDLDNGVEHLANALTVCGQPN  147 (175)
Q Consensus       118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~  147 (175)
                      .+|+.+..+|++++|..+|-+||...|+=.
T Consensus        10 ~lG~~~~~~g~~~~A~~~~~~al~~~p~~~   39 (184)
T 3vtx_A           10 DIGDKKRTKGDFDGAIRAYKKVLKADPNNV   39 (184)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence            466666666666666666666666665433

>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*

Probab=84.27  E-value=1.4  Score=31.58  Aligned_cols=30  Identities=23%  Similarity=0.285  Sum_probs=26.5

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQP  146 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP  146 (175)
                      ..+|..+...|++++|..+|-+|+.+.|+.
T Consensus        93 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~  122 (148)
T 2vgx_A           93 FHAAECLLQXGELAEAESGLFLAQELIANX  122 (148)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence            567999999999999999999999998863

>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}

Probab=83.91  E-value=1.8  Score=31.15  Aligned_cols=31  Identities=23%  Similarity=0.160  Sum_probs=28.1

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN  147 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~  147 (175)
                      ..+|..+...|++++|..+|-+++...|++.
T Consensus       112 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~  142 (176)
T 2r5s_A          112 CELAVQYNQVGRDEEALELLWNILKVNLGAQ  142 (176)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred             HHHHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence            5689999999999999999999999998863

>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A

Probab=83.43  E-value=3.7  Score=27.86  Aligned_cols=32  Identities=6%  Similarity=-0.079  Sum_probs=23.2

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      ..+|..+...|++++|..+|-+|+...|+-.+
T Consensus        51 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~   82 (166)
T 1a17_A           51 GNRSLAYLRTECYGYALGDATRAIELDKKYIK   82 (166)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhCcccHH
Confidence            34667777778888888888888888775433

>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A

Probab=83.23  E-value=2  Score=26.49  Aligned_cols=34  Identities=24%  Similarity=0.346  Sum_probs=29.0

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL  150 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL  150 (175)
                      ..+|..+...|++++|..+|-+|+...|+-.+.+
T Consensus        47 ~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~   80 (91)
T 1na3_A           47 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK   80 (91)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence            4689999999999999999999999988755444

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=83.16  E-value=1.8  Score=29.01  Aligned_cols=32  Identities=6%  Similarity=-0.039  Sum_probs=22.6

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      ..+|..+...|++++|..+|-+|+.+.|+-.+
T Consensus        42 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~   73 (126)
T 3upv_A           42 SNRAAALAKLMSFPEAIADCNKAIEKDPNFVR   73 (126)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHH
Confidence            34677777777777788888888877766433

>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A

Probab=82.77  E-value=2.2  Score=26.35  Aligned_cols=32  Identities=25%  Similarity=0.402  Sum_probs=27.7

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      ..+|..+...|++++|..+|-+|+...|+..+
T Consensus        13 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~   44 (91)
T 1na3_A           13 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAE   44 (91)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH
Confidence            46788999999999999999999999886544

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=82.43  E-value=2  Score=28.76  Aligned_cols=39  Identities=15%  Similarity=0.168  Sum_probs=32.6

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhc------CChHHHHHHHhh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVC------GQPNQLLGVLQQ  155 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~Vc------pqP~~LL~IyQq  155 (175)
                      ..+|..+...|++++|..+|-+|+...      |+-.+++..+.+
T Consensus        76 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~  120 (126)
T 3upv_A           76 IRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYK  120 (126)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHH
Confidence            568999999999999999999999999      766666655543

>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A

Probab=81.29  E-value=3.8  Score=28.42  Aligned_cols=32  Identities=9%  Similarity=0.108  Sum_probs=22.7

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      ..+|..+...|++++|+.+|-+|+...|+-.+
T Consensus        56 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~   87 (142)
T 2xcb_A           56 LGLGACRQSLGLYEQALQSYSYGALMDINEPR   87 (142)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH
Confidence            35677777777777777788887777765433

>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.07  E-value=2.3  Score=28.33  Aligned_cols=38  Identities=18%  Similarity=0.250  Sum_probs=29.1

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ  154 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ  154 (175)
                      ..+|..+...|++++|..+|-+|+...|+-.++...+.
T Consensus       103 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~  140 (148)
T 2dba_A          103 YRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALR  140 (148)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence            35788888888888999999999988887665554443

>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}

Probab=80.99  E-value=2.8  Score=27.67  Aligned_cols=34  Identities=15%  Similarity=0.180  Sum_probs=24.7

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL  150 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL  150 (175)
                      ..+|..+...|++++|..+|-+++..+|+.....
T Consensus        80 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~  113 (129)
T 2xev_A           80 LKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAAR  113 (129)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHH
Confidence            3567777777888888888888888887765443

>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=80.68  E-value=2.4  Score=28.23  Aligned_cols=28  Identities=21%  Similarity=0.373  Sum_probs=13.7

Q ss_pred             HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697        118 QLGETLLAAGDLDNGVEHLANALTVCGQ  145 (175)
Q Consensus       118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq  145 (175)
                      .+|..+...|++++|+.+|.+|+...|+
T Consensus        33 ~~a~~~~~~~~~~~A~~~~~~a~~~~~~   60 (148)
T 2dba_A           33 KEGNELFKCGDYGGALAAYTQALGLDAT   60 (148)
T ss_dssp             HHHHHHHTTTCHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHccc
Confidence            3444444445555555555555554444

>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1

Probab=80.29  E-value=2.9  Score=26.35  Aligned_cols=31  Identities=10%  Similarity=0.057  Sum_probs=22.5

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN  147 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~  147 (175)
                      ..+|..+...|++++|...|-+|+...|.-.
T Consensus        42 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~   72 (118)
T 1elw_A           42 SNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG   72 (118)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHhCcccH
Confidence            4456677777888888888888888877533

>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}

Probab=80.23  E-value=2.8  Score=26.77  Aligned_cols=34  Identities=18%  Similarity=0.141  Sum_probs=28.6

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL  150 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL  150 (175)
                      ..+|..+...|++++|+.+|-+|+...|+-...+
T Consensus         8 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~   41 (111)
T 2l6j_A            8 KEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGY   41 (111)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Confidence            5689999999999999999999999998655443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	175
d1om2a_	95	a.23.4.1 (A:) Mitochondrial import receptor subuni	3e-38

>d1om2a_ a.23.4.1 (A:) Mitochondrial import receptor subunit Tom20 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 95

class: All alpha proteins
fold: Open three-helical up-and-down bundle
superfamily: Mitochondrial import receptor subunit Tom20
family: Mitochondrial import receptor subunit Tom20
domain: Mitochondrial import receptor subunit Tom20
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  124 bits (313), Expect = 3e-38
 Identities = 49/74 (66%), Positives = 57/74 (77%)

Query: 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPP 159
           +PDLKD  AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP
Sbjct: 7   LPDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPP 66

Query: 160 NVFNALIEKLPPAG 173
            VF  L+ KLP   
Sbjct: 67  PVFQMLLTKLPTIS 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d1om2a_	95	Mitochondrial import receptor subunit Tom20 {Rat (	100.0
d2ff4a2	179	Probable regulatory protein EmbR, middle domain {M	90.91
d1elra_	128	Hop {Human (Homo sapiens) [TaxId: 9606]}	86.7
d2c2la1	201	STIP1 homology and U box-containing protein 1, STU	83.33
d1a17a_	159	Protein phosphatase 5 {Human (Homo sapiens) [TaxId	81.19
d1elwa_	117	Hop {Human (Homo sapiens) [TaxId: 9606]}	81.02
d2fbna1	153	Putative 70 kda peptidylprolyl isomerase PFL2275c	80.22

>d1om2a_ a.23.4.1 (A:) Mitochondrial import receptor subunit Tom20 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Open three-helical up-and-down bundle
superfamily: Mitochondrial import receptor subunit Tom20
family: Mitochondrial import receptor subunit Tom20
domain: Mitochondrial import receptor subunit Tom20
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.6e-35  Score=217.18  Aligned_cols=80  Identities=61%  Similarity=1.007  Sum_probs=77.0

Q ss_pred             HhhcCCCCCCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhcCCCC
Q psy14697         94 QKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAG  173 (175)
Q Consensus        94 ~a~~~~~p~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kLp~~~  173 (175)
                      +++.+++||++|++++|+||++||++||+|+++|++++|+.||||||+|||||++||+|||+||||+||++|++|||+++
T Consensus         1 ~a~~~~~P~~~D~~~~e~~Fl~eV~lGE~Ll~~G~~~~g~~h~~nAi~Vc~qP~~LL~ilq~tlP~~Vf~~Ll~kLp~~~   80 (95)
T d1om2a_           1 RAGLSKLPDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTIS   80 (95)
T ss_dssp             CCCCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCCHHHHHHHHHSCSHH
T ss_pred             CCccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999999999999999999999999999999999999999999999864

>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: BTAD-like
domain: Probable regulatory protein EmbR, middle domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.91  E-value=0.097  Score=38.64  Aligned_cols=34  Identities=32%  Similarity=0.462  Sum_probs=32.0

Q ss_pred             HHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697        113 FLQEIQLGETLLAAGDLDNGVEHLANALTVCGQP  146 (175)
Q Consensus       113 Fl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP  146 (175)
                      |-..+..|..+...|++++|..+|.+||.+|+.+
T Consensus        11 f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~   44 (179)
T d2ff4a2          11 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGP   44 (179)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCccc
Confidence            7889999999999999999999999999999865

>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.70  E-value=0.46  Score=32.14  Aligned_cols=30  Identities=20%  Similarity=0.293  Sum_probs=22.2

Q ss_pred             HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697        117 IQLGETLLAAGDLDNGVEHLANALTVCGQP  146 (175)
Q Consensus       117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP  146 (175)
                      -.+|..+...|++++|+.+|.+||.+.|+=
T Consensus         8 k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~   37 (128)
T d1elra_           8 KELGNDAYKKKDFDTALKHYDKAKELDPTN   37 (128)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence            357777777777777888888887777663

>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.33  E-value=0.68  Score=31.78  Aligned_cols=28  Identities=14%  Similarity=0.175  Sum_probs=15.1

Q ss_pred             HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697        118 QLGETLLAAGDLDNGVEHLANALTVCGQ  145 (175)
Q Consensus       118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq  145 (175)
                      +.|..+...|++++|+.+|-+||..-|+
T Consensus         9 ~~Gn~~~~~g~~~~Ai~~~~kal~~~p~   36 (201)
T d2c2la1           9 EQGNRLFVGRKYPEAAACYGRAITRNPL   36 (201)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence            3455555555555555555555555443

>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Protein phosphatase 5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.19  E-value=0.91  Score=31.16  Aligned_cols=29  Identities=7%  Similarity=-0.020  Sum_probs=15.8

Q ss_pred             HhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697        118 QLGETLLAAGDLDNGVEHLANALTVCGQP  146 (175)
Q Consensus       118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP  146 (175)
                      .+|..+...|++++|..+|-+||.+-|+=
T Consensus        49 ~lg~~~~~~~~~~~A~~~~~kal~~~p~~   77 (159)
T d1a17a_          49 NRSLAYLRTECYGYALGDATRAIELDKKY   77 (159)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             hhHHHHHhccccchHHHHHHHHHHHcccc
Confidence            34555555555555555555555555443

>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.02  E-value=0.98  Score=29.88  Aligned_cols=30  Identities=17%  Similarity=0.390  Sum_probs=16.9

Q ss_pred             hHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697        119 LGETLLAAGDLDNGVEHLANALTVCGQPNQ  148 (175)
Q Consensus       119 lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~  148 (175)
                      .|..++..|++++|+.+|-+||...|+=..
T Consensus         9 ~g~~~~~~g~~~eAi~~~~~al~~~p~~~~   38 (117)
T d1elwa_           9 KGNKALSVGNIDDALQCYSEAIKLDPHNHV   38 (117)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHhcCCcchh
Confidence            455555555555566666665555555443

>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Putative 70 kda peptidylprolyl isomerase PFL2275c
species: Plasmodium falciparum [TaxId: 5833]

Probab=80.22  E-value=1  Score=31.19  Aligned_cols=39  Identities=18%  Similarity=0.164  Sum_probs=33.5

Q ss_pred             HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697        116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ  154 (175)
Q Consensus       116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ  154 (175)
                      -..+|..+...|++++|..+|-+|+.+.|+-.+...-++
T Consensus       104 ~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~  142 (153)
T d2fbna1         104 LYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYE  142 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred             hHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence            357899999999999999999999999998877665554