Psyllid ID: psy14790

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650------
MSRALDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQPPQPLHNATCADLPRPAEREPCEGPCNAARWKFSPWGTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSKSCGTGVETRSAVCIDDYGREVDESQCSAAEKIIQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPCPEWITGQFSAEVGKNPDQKMGKGTAIRDVRCNLGDDSLCASIPRPPSVESCVCSVTCGEGTATRDVRCNLGDDSLCASIPRPPSVETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGRLWPVS
cccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccEEEccEEEEcccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccEEEccccccccccccHHHHHHHHHcccccccccccccEEEEEcccccccccEEEEEEccccEEEEEccccccccccccccccEEEccEEEEEcccccccccccEEccccccccccccEEEcccEEcccccEEEEEEEcccccEEEEEEcccccccccccEEEEEcccccEEEEccccEEcccccEEEEccEEEEEEEccccEEEEEEcccccccEEEEEEccccccEEEEEEEEEEccccccccccccccccccccccccccccccEEcccccccccccccEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccEEEEcc
cccHHccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHEEcccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccccccEEEEEcccccccccccccHHHHHHHHccccccccccccccEEEEEcccccccccEEEEEEccccEEEEEccccccccccccccccEEEccEEcccccccccccccccccccccccccccEEEEEEEEcccccccEEEEEEccccccEEEEEcccccccccccEEEEEEccccEEEEcccEEEcccccEEEEccEEEEEcccccccccccccccccccEEEEcccccccccEEEEEEEEcccccccccHcccccccccccccccccccccEccccccccccccccEEEEEEEEEcccccccHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEEcccccccccccccccHccccccccccccccccccccccccccccccccEEEEccccccccccccccEcccc
msraldnytypwswsncsrHYLTEFLEWQVisqsecsahcgpgtrsvslqcvqhfpassqppqplhnatcadlprpaerepcegpcnaarwkfspwgtpvcqhlwctsdegeregchtqtspwadgtpcygathwcqrgscvardtsslrprdggwgpwqsfgscsrpcgggikksyrecsspapanggkycvgkrvryrscntrdcapgtmdfrEEQCvkfngnnfsvpglsrnvkwtpkylggdnacKLYCRVAQSSAYYLLkdkvidgtpcgpdtfdvcingkcmkagcnhvldsdskldfcgvcegnnqtcqeirgshntsqygytrvlripagssnlditqygyggtssddnylalsdgetnepilngknvvskSHKVIVFGGIaidytgtdAVVERINCSRPLTKELIVECSKscgtgvetrsavciddygrevdESQCSAAEKIIQRvcgtskcpqwsvdkwsacsvscgkgerrreiwcqrdnhvvhdsycaddpvparkeicymapcpewitgqfsaevgknpdqkmgkgtairdvrcnlgddslcasiprppsvescvcsvtcgegtatrdvrcnlgddslcasiprppsvetcvvhpcdddtldhyndipgsrydmqdspyylwrhghwteqwnncyigrlwpvs
msraldnytypwswsNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFpassqppqplhNATCADLPRPAEREPCEGPCNAARWKFSPWGTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPrdggwgpwqsfgscSRPCGGGIKKSyrecsspapanggkycvgkrvryRSCNTRDCAPGTMDFREEQCVKFNgnnfsvpglsrnVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNqtcqeirgshntsqyGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSkscgtgvetrsAVCIDDYGREVDESQCSAAEKIIQRVCGtskcpqwsvdkwsaCSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPCPEWITGQFSAEVGKNPDQKMGKGTAIRDVRCNLGDDSLcasiprppsveSCVCSVTCGEGTATRDVRCNLGDDSLCASIPRPPSVETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGRLWPVS
MSRALDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQPPQPLHNATCADLPRPAEREPCEGPCNAARWKFSPWGTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSKSCGTGVETRSAVCIDDYGREVDESQCSAAEKIIQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPCPEWITGQFSAEVGKNPDQKMGKGTAIRDVRCNLGDDSLCASIPRPPSVESCVCSVTCGEGTATRDVRCNLGDDSLCASIPRPPSVETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGRLWPVS
*****DNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQ******************************GPCNAARWKFSPWGTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGIKKSYR********NGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALS*****EPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSKSCGTGVETRSAVCIDDYGREVDESQCSAAEKIIQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPCPEWITGQFSAEV***********TAIRDVRCNLGDDSLCASIPRPPSVESCVCSVTCGEGTATRDVRCNLGDDSLCASIPRPPSVETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGRLWP**
MSRAL**YTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQPPQPLHNATCADLPRPAEREPCEGPCNAARWKFSPWGTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVAR********DGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSKSCGTGVETRSAVCIDD*************************CPQWSVDKWSACSVSCGKGERRREIWCQ**N******************ICYMAPCPEWITGQFSAEVGKNPDQKMGKGTAIRDVRCNLGDDSLCASIPRPPSVESCVCSVTCGEGTATRDVRCN***************VETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGRLWP**
MSRALDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQPPQPLHNATCADLPRPAEREPCEGPCNAARWKFSPWGTPVCQHLWCTSD**********TSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSKSCGTGVETRSAVCIDDYGREVDESQCSAAEKIIQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPCPEWITGQFSAEVGKNPDQKMGKGTAIRDVRCNLGDDSLCASIPRPPSVESCVCSVTCGEGTATRDVRCNLGDDSLCASIPRPPSVETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGRLWPVS
**R*LDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQPPQPLHNATCADLPRPAEREPCEGPCNAARWKFSPWGTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSKSCGTGVETRSAVCIDDYGREVDESQCSAAEK*IQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPCPEWITGQFSAEVGKNPDQKMGKGTAIRDVRCNLGDDSLCASIPRPPSVESCVCSVTCGEGTATRDVRCNLGDDSLCASIPRPPSVETCVVHPCDDDTL**YNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGR*****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSRALDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQPPQPLHNATCADLPRPAEREPCEGPCNAARWKFSPWGTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKWTPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVECSKSCGTGVETRSAVCIDDYGREVDESQCSAAEKIIQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPCPEWITGQFSAEVGKNPDQKMGKGTAIRDVRCNLGDDSLCASIPRPPSVESCVCSVTCGEGTATRDVRCNLGDDSLCASIPRPPSVETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWTEQWNNCYIGRLWPVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query656 2.2.26 [Sep-21-2011]
P59510 1910 A disintegrin and metallo yes N/A 0.916 0.314 0.344 1e-106
Q9P2N4 1935 A disintegrin and metallo no N/A 0.871 0.295 0.372 1e-105
P59511 1906 A disintegrin and metallo yes N/A 0.870 0.299 0.359 1e-101
Q19791 2150 A disintegrin and metallo yes N/A 0.881 0.268 0.329 3e-89
Q9UP79889 A disintegrin and metallo no N/A 0.625 0.461 0.396 2e-82
P59384950 A disintegrin and metallo no N/A 0.641 0.443 0.401 1e-81
Q9UHI8967 A disintegrin and metallo no N/A 0.736 0.499 0.343 2e-78
Q9WUQ1967 A disintegrin and metallo no N/A 0.634 0.430 0.365 8e-78
Q8TE58950 A disintegrin and metallo no N/A 0.634 0.437 0.389 9e-78
P97857968 A disintegrin and metallo no N/A 0.660 0.447 0.367 3e-77
>sp|P59510|ATS20_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Homo sapiens GN=ADAMTS20 PE=2 SV=2 Back     alignment and function desciption
 Score =  386 bits (991), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 266/773 (34%), Positives = 363/773 (46%), Gaps = 172/773 (22%)

Query: 1    MSRALDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQ 60
            M+ AL  +  PWSWSNCSR Y+TEFL+       EC                       +
Sbjct: 430  MAPALSFHMSPWSWSNCSRKYVTEFLD---TGYGEC--------------------LLDK 466

Query: 61   PPQPLHNATCADLPR--PAEREPCEGPCNAARWKFSPWG-----TPVCQHLWCTSDEGER 113
            P + ++N     LP   P  R      C  A   F P         +C HLWCTS E   
Sbjct: 467  PDEEIYN-----LPSELPGSRYDGNKQCELA---FGPGSQMCPHINICMHLWCTSTEKLH 518

Query: 114  EGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGI 173
            +GC TQ  P ADGT C    H C+ G CV ++T + RP +G WGPW+ + SCSR CGGGI
Sbjct: 519  KGCFTQHVPPADGTDCGPGMH-CRHGLCVNKETET-RPVNGEWGPWEPYSSCSRTCGGGI 576

Query: 174  KKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLS 233
            + + R C+ P P NGG YCVG+R+++RSCNT  C  GT DFRE+QC  FNG +  + G+ 
Sbjct: 577  ESATRRCNRPEPRNGGNYCVGRRMKFRSCNTDSCPKGTQDFREKQCSDFNGKHLDISGIP 636

Query: 234  RNVKWTPKY--LGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAG 291
             NV+W P+Y  +G  + CKLYC+VA ++ +YLLKD V DGTPCG +T D+C+ G+CM AG
Sbjct: 637  SNVRWLPRYSGIGTKDRCKLYCQVAGTNYFYLLKDMVEDGTPCGTETHDICVQGQCMAAG 696

Query: 292  CNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPAGSSNLDITQYGYGG 351
            C+HVL+S +K+D CGVC G+N +C+ I G  N+S YGY  V++IPAG++N+DI QY Y G
Sbjct: 697  CDHVLNSSAKIDKCGVCGGDNSSCKTITGVFNSSHYGYNVVVKIPAGATNVDIRQYSYSG 756

Query: 352  TSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGG--IAIDYTGTDAVVERINCSRPL 409
               DD+YLALSD E N  + NG  ++S S K I   G    I+Y+G++  VERIN +   
Sbjct: 757  -QPDDSYLALSDAEGNF-LFNGNFLLSTSKKEINVQGTRTVIEYSGSNNAVERINSTNRQ 814

Query: 410  TKELIVE-------------------------------------CSKSCGTGVETRSAVC 432
             KE+++E                                     C+K C  G++ R+  C
Sbjct: 815  EKEILIEVLCVGNLYNPDVHYSFNIPLEERSDMFTWDPYGPWEGCTKMC-QGLQRRNITC 873

Query: 433  IDDYGRE-VDESQCSA--AEKIIQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWCQR 489
            I       V + +C        + + C T    +W V   S CS  CG+G R  +I C +
Sbjct: 874  IHKSDHSVVSDKECDHLPLPSFVTQSCNTDCELRWHVIGKSECSSQCGQGYRTLDIHCMK 933

Query: 490  ------DNHVVHDSYCADDPVPARKEICY------------MAPCPE-----------WI 520
                      V D YC D   P  +E+C+             + C             + 
Sbjct: 934  YSIHEGQTVQVDDHYCGDQLKPPTQELCHGNCVFTRWHYSEWSQCSRSCGGGERSRESYC 993

Query: 521  TGQFSAEVGKNPDQKM----------------------------GKGTAIRDVRCNLGDD 552
               F   +  N  Q++                            GKGT  R V C L  D
Sbjct: 994  MNNFGHRLADNECQELSRVTRENCNEFSCPSWAASEWSECLVTCGKGTKQRQVWCQLNVD 1053

Query: 553  SL----CASIPRPPSVESCV--------------CSVTCGEGTATRDVRC------NLGD 588
             L    C S  +P S+  C               C+ TCG G   RDV+C       + +
Sbjct: 1054 HLSDGFCNSSTKPESLSPCELHTCASWQVGPWGPCTTTCGHGYQMRDVKCVNELASAVLE 1113

Query: 589  DSLCASIPRPPSVETCVVHPCDDDTLDHYNDIPGSRYDMQDSPYYLWRHGHWT 641
            D+ C    RP   ++CV+ PC   +      +P             WRHG WT
Sbjct: 1114 DTECHEASRPSDRQSCVLTPCSFISKLETALLPTVLIKKMAQ----WRHGSWT 1162
May play a role in tissue-remodeling process occurring in both normal and pathological conditions.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: -
>sp|Q9P2N4|ATS9_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 9 OS=Homo sapiens GN=ADAMTS9 PE=2 SV=4 Back     alignment and function description
>sp|P59511|ATS20_MOUSE A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Mus musculus GN=Adamts20 PE=2 SV=2 Back     alignment and function description
>sp|Q19791|GON1_CAEEL A disintegrin and metalloproteinase with thrombospondin motifs gon-1 OS=Caenorhabditis elegans GN=gon-1 PE=1 SV=3 Back     alignment and function description
>sp|Q9UP79|ATS8_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 8 OS=Homo sapiens GN=ADAMTS8 PE=2 SV=2 Back     alignment and function description
>sp|P59384|ATS15_MOUSE A disintegrin and metalloproteinase with thrombospondin motifs 15 OS=Mus musculus GN=Adamts15 PE=2 SV=2 Back     alignment and function description
>sp|Q9UHI8|ATS1_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Homo sapiens GN=ADAMTS1 PE=1 SV=4 Back     alignment and function description
>sp|Q9WUQ1|ATS1_RAT A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Rattus norvegicus GN=Adamts1 PE=2 SV=1 Back     alignment and function description
>sp|Q8TE58|ATS15_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 15 OS=Homo sapiens GN=ADAMTS15 PE=2 SV=1 Back     alignment and function description
>sp|P97857|ATS1_MOUSE A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Mus musculus GN=Adamts1 PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query656
328712328 1527 PREDICTED: A disintegrin and metalloprot 0.887 0.381 0.413 1e-128
321470769 1475 hypothetical protein DAPPUDRAFT_303360 [ 0.873 0.388 0.410 1e-119
307177515 1810 A disintegrin and metalloproteinase with 0.861 0.312 0.391 1e-111
383858720 1772 PREDICTED: A disintegrin and metalloprot 0.919 0.340 0.364 1e-110
332018382 1564 A disintegrin and metalloproteinase with 0.798 0.335 0.406 1e-109
307210302 1143 A disintegrin and metalloproteinase with 0.868 0.498 0.391 1e-109
340718252 1718 PREDICTED: A disintegrin and metalloprot 0.855 0.326 0.393 1e-109
350401802 1718 PREDICTED: A disintegrin and metalloprot 0.855 0.326 0.393 1e-109
410920165 1945 PREDICTED: A disintegrin and metalloprot 0.928 0.313 0.349 1e-109
348510550 1951 PREDICTED: A disintegrin and metalloprot 0.920 0.309 0.348 1e-109
>gi|328712328|ref|XP_001947361.2| PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 9 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/679 (41%), Positives = 376/679 (55%), Gaps = 97/679 (14%)

Query: 1   MSRALDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQ 60
           MSR LD+ ++PW+WS CSRH+LTE+LE             G G      +C+Q  P  S+
Sbjct: 175 MSRMLDHNSHPWTWSACSRHFLTEYLE------------AGNG------RCLQDDP--SK 214

Query: 61  PPQPLHNATCADLPRPAEREPCEGPCNAARWKFSPWGT--PVCQHLWCTSDEGEREGCHT 118
               + N T  +   P E    +  C       S   +  PVCQ LWCT+  GE++GC T
Sbjct: 215 DYLEIENQT-EEKHFPGENYTGDKQCELIYGSGSKICSYMPVCQRLWCTTGSGEKDGCRT 273

Query: 119 QTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPWQSFGSCSRPCGGGIKKSYR 178
           Q  PWADGT C+ + +WCQ+G CV +D ++L+P DGGWG WQ +G C+R CGGG+KKSYR
Sbjct: 274 QHMPWADGTQCWSSKNWCQQGKCVPKDRNALKPVDGGWGSWQPYGECTRTCGGGVKKSYR 333

Query: 179 ECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGNNFSVPGLSRNVKW 238
           +C+ P P+NGGKYC GKRVR RSC T DC PGT DFR EQC  FN   F++  L  +V+W
Sbjct: 334 DCTDPPPSNGGKYCTGKRVRVRSCATSDCPPGTPDFRGEQCAMFNNKTFNIADLEPDVQW 393

Query: 239 TPKYLGGDNA-CKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLD 297
            PK+ G D   C+L+CRVA S+AYY LK+KV+DGTPC PD +D+C+NG C KAGC+H L 
Sbjct: 394 LPKFGGYDEERCRLFCRVAASTAYYQLKEKVVDGTPCAPDKYDICVNGMCEKAGCDHALG 453

Query: 298 SDSKLDFCGVCEGNNQTCQEIRGSHNTSQ-YGYTRVLRIPAGSSNLDITQYGYGGTSSDD 356
           SDS+LD CGVC GNN +CQ++ G+HN+S   GY++VLRIPAGSSNLDI Q+G+ G+S DD
Sbjct: 454 SDSQLDMCGVCGGNNSSCQQVAGTHNSSSPNGYSKVLRIPAGSSNLDIRQHGHNGSSKDD 513

Query: 357 NYLALSDGETNEPILNGKNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVE 416
           NYLAL D  T E +LNG  V+S  +KVIV+GG  I+Y+G+DA VERIN S+PL K++ VE
Sbjct: 514 NYLALVDSVTGEYVLNGNYVLSTFNKVIVYGGTTIEYSGSDAPVERINSSKPLNKDVTVE 573

Query: 417 ------------------------------------CSKSCGTGVETRSAVCIDDYGREV 440
                                               C K C +G +T+  VC+     E 
Sbjct: 574 LLSIGNSYAPDIEYQYTVMRDKRDIYVWALTDEWGQCDKMC-SGEQTKIYVCVRKETGEE 632

Query: 441 DESQCSA--AEKIIQRVCGTSKCPQWSVDKWSACSVSCGKGERRREIWC-----QRDNHV 493
               C+   A +  ++ C      +W     S CS  CG G R + + C     +R    
Sbjct: 633 ARGYCNEHDAPRTKKQPCNLHCTIKWKTVSQSECSAQCGPGTRTQSVACVQEYDKRTPSQ 692

Query: 494 VHDSYCADDPVPARKEICYMAPCP-EWITGQFSAEVGKNPDQKMGKGTAIRDVRC----- 547
           + D+ C+  P PA        PC  + +  ++S        +  G G   R+ RC     
Sbjct: 693 ISDTMCSHLPKPAN-----TIPCDGKCLESRWSFTEWTPCSKTCGSGVQHREARCVNDNG 747

Query: 548 NLGDDSLCAS----IPRPPSVESC---------VCSVTCGEGTATRDVRCNLGDDSLCAS 594
              D++ C      I R    + C          CSVTCGEG   R V C + +  + A+
Sbjct: 748 EPRDETSCNESEKIITRVCGTDKCPQWSVGEWSSCSVTCGEGQIERSVWCRMDNGRVLAA 807

Query: 595 ----IPRPPSVETCVVHPC 609
                  P + ETC + PC
Sbjct: 808 EYCGSNMPATKETCSMKPC 826

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|321470769|gb|EFX81744.1| hypothetical protein DAPPUDRAFT_303360 [Daphnia pulex] Back     alignment and taxonomy information
>gi|307177515|gb|EFN66626.1| A disintegrin and metalloproteinase with thrombospondin motifs 9 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383858720|ref|XP_003704847.1| PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332018382|gb|EGI58976.1| A disintegrin and metalloproteinase with thrombospondin motifs 20 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307210302|gb|EFN86932.1| A disintegrin and metalloproteinase with thrombospondin motifs 20 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340718252|ref|XP_003397585.1| PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350401802|ref|XP_003486266.1| PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|410920165|ref|XP_003973554.1| PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 9-like [Takifugu rubripes] Back     alignment and taxonomy information
>gi|348510550|ref|XP_003442808.1| PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 9 [Oreochromis niloticus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query656
UNIPROTKB|G3V1X8 1504 ADAMTS20 "ADAM metallopeptidas 0.477 0.208 0.514 2.3e-130
UNIPROTKB|P59510 1910 ADAMTS20 "A disintegrin and me 0.477 0.163 0.510 7.1e-129
UNIPROTKB|J3QT00 1910 ADAMTS20 "A disintegrin and me 0.477 0.163 0.514 9.2e-129
ZFIN|ZDB-GENE-070814-6 1443 adamts9 "ADAM metallopeptidase 0.484 0.220 0.503 3.7e-125
UNIPROTKB|F1SFS3 1936 ADAMTS9 "Uncharacterized prote 0.477 0.161 0.506 1.7e-123
UNIPROTKB|B7ZVX9 1907 ADAMTS9 "ADAMTS9 protein" [Hom 0.477 0.164 0.490 2.4e-122
UNIPROTKB|Q9P2N4 1935 ADAMTS9 "A disintegrin and met 0.477 0.161 0.490 2.7e-122
UNIPROTKB|E1BI72 1941 ADAMTS9 "Uncharacterized prote 0.478 0.161 0.503 2.4e-121
UNIPROTKB|E2RDJ3 1930 ADAMTS9 "Uncharacterized prote 0.472 0.160 0.496 5.9e-120
MGI|MGI:2660628 1906 Adamts20 "a disintegrin-like a 0.477 0.164 0.518 6.1e-120
UNIPROTKB|G3V1X8 ADAMTS20 "ADAM metallopeptidase with thrombospondin type 1 motif, 20, isoform CRA_c" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 914 (326.8 bits), Expect = 2.3e-130, Sum P(4) = 2.3e-130
 Identities = 165/321 (51%), Positives = 221/321 (68%)

Query:   100 VCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPW 159
             +C HLWCTS E   +GC TQ  P ADGT C    H C+ G CV ++T + RP +G WGPW
Sbjct:   505 ICMHLWCTSTEKLHKGCFTQHVPPADGTDCGPGMH-CRHGLCVNKETET-RPVNGEWGPW 562

Query:   160 QSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQC 219
             + + SCSR CGGGI+ + R C+ P P NGG YCVG+R+++RSCNT  C  GT DFRE+QC
Sbjct:   563 EPYSSCSRTCGGGIESATRRCNRPEPRNGGNYCVGRRMKFRSCNTDSCPKGTQDFREKQC 622

Query:   220 VKFNGNNFSVPGLSRNVKWTPKY--LGGDNACKLYCRVAQSSAYYLLKDKVIDGTPCGPD 277
               FNG +  + G+  NV+W P+Y  +G  + CKLYC+VA ++ +YLLKD V DGTPCG +
Sbjct:   623 SDFNGKHLDISGIPSNVRWLPRYSGIGTKDRCKLYCQVAGTNYFYLLKDMVEDGTPCGTE 682

Query:   278 TFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQYGYTRVLRIPA 337
             T D+C+ G+CM AGC+HVL+S +K+D CGVC G+N +C+ I G  N+S YGY  V++IPA
Sbjct:   683 THDICVQGQCMAAGCDHVLNSSAKIDKCGVCGGDNSSCKTITGVFNSSHYGYNVVVKIPA 742

Query:   338 GSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGGI--AIDYTG 395
             G++N+DI QY Y G   DD+YLALSD E N  + NG  ++S S K I   G    I+Y+G
Sbjct:   743 GATNVDIRQYSYSG-QPDDSYLALSDAEGNF-LFNGNFLLSTSKKEINVQGTRTVIEYSG 800

Query:   396 TDAVVERINCSRPLTKELIVE 416
             ++  VERIN +    KELI++
Sbjct:   801 SNNAVERINSTNRQEKELILQ 821
GO:0004222 "metalloendopeptidase activity" evidence=IEA
GO:0005578 "proteinaceous extracellular matrix" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
UNIPROTKB|P59510 ADAMTS20 "A disintegrin and metalloproteinase with thrombospondin motifs 20" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J3QT00 ADAMTS20 "A disintegrin and metalloproteinase with thrombospondin motifs 20" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070814-6 adamts9 "ADAM metallopeptidase with thrombospondin type 1 motif, 9" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFS3 ADAMTS9 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|B7ZVX9 ADAMTS9 "ADAMTS9 protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9P2N4 ADAMTS9 "A disintegrin and metalloproteinase with thrombospondin motifs 9" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BI72 ADAMTS9 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDJ3 ADAMTS9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2660628 Adamts20 "a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query656
pfam05986114 pfam05986, ADAM_spacer1, ADAM-TS Spacer 1 8e-19
smart0020953 smart00209, TSP1, Thrombospondin type 1 repeats 2e-10
cd04273207 cd04273, ZnMc_ADAMTS_like, Zinc-dependent metallop 9e-07
smart0020953 smart00209, TSP1, Thrombospondin type 1 repeats 3e-05
pfam0009048 pfam00090, TSP_1, Thrombospondin type 1 domain 0.002
>gnl|CDD|218841 pfam05986, ADAM_spacer1, ADAM-TS Spacer 1 Back     alignment and domain information 
 Score = 81.9 bits (203), Expect = 8e-19
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 13/103 (12%)

Query: 318 IRGSHNTS--QYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLAL--SDGETNEPILNG 373
           ++G+   +   +GY  V+ IPAG++++ I +    G     NYLAL  SDGE     LNG
Sbjct: 3   VKGTFTKALLSHGYNDVVTIPAGATHILIRELKASG-----NYLALKNSDGEY---YLNG 54

Query: 374 KNVVSKSHKVIVFGGIAIDYTGTDAVVERINCSRPLTKELIVE 416
              +S S       G   +Y+ +D   ER+  + P  + L V+
Sbjct: 55  NWTISWSGT-FELAGTVFEYSRSDDAPERLTATGPTNEPLTVQ 96

This family represents the Spacer-1 region from the ADAM-TS family of metalloproteinases. Length = 114
>gnl|CDD|214559 smart00209, TSP1, Thrombospondin type 1 repeats Back     alignment and domain information
>gnl|CDD|239801 cd04273, ZnMc_ADAMTS_like, Zinc-dependent metalloprotease, ADAMTS_like subgroup Back     alignment and domain information
>gnl|CDD|214559 smart00209, TSP1, Thrombospondin type 1 repeats Back     alignment and domain information
>gnl|CDD|215709 pfam00090, TSP_1, Thrombospondin type 1 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 656
KOG3538|consensus845 100.0
KOG4597|consensus 560 99.96
KOG4597|consensus560 99.86
PF05986114 ADAM_spacer1: ADAM-TS Spacer 1; InterPro: IPR01029 99.52
smart0020953 TSP1 Thrombospondin type 1 repeats. Type 1 repeats 99.09
PTZ00087340 thrombosponding-related protein; Provisional 98.93
KOG3538|consensus845 98.86
PF0009049 TSP_1: Thrombospondin type 1 domain; InterPro: IPR 98.82
KOG3539|consensus508 98.82
KOG3607|consensus716 98.82
smart0020953 TSP1 Thrombospondin type 1 repeats. Type 1 repeats 98.78
KOG3539|consensus508 98.71
PF0009049 TSP_1: Thrombospondin type 1 domain; InterPro: IPR 98.5
PTZ00087340 thrombosponding-related protein; Provisional 97.84
PTZ00441576 sporozoite surface protein 2 (SSP2); Provisional 97.67
KOG1480|consensus 909 97.54
KOG1480|consensus 909 97.42
smart00608137 ACR ADAM Cysteine-Rich Domain. 97.35
PTZ00441 576 sporozoite surface protein 2 (SSP2); Provisional 97.3
KOG3658|consensus764 85.11
smart00608137 ACR ADAM Cysteine-Rich Domain. 84.17
>KOG3538|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.3e-64  Score=589.35  Aligned_cols=476  Identities=37%  Similarity=0.778  Sum_probs=411.3

Q ss_pred             CCCccCCCCCCcccccchHHHHHHHhhhccccccccccccCCCcccccccccCCCCCCCCCCCCCCCcccCCCCCCCCC-
Q psy14790          1 MSRALDNYTYPWSWSNCSRHYLTEFLEWQVISQSECSAHCGPGTRSVSLQCVQHFPASSQPPQPLHNATCADLPRPAER-   79 (656)
Q Consensus         1 m~~~~~~~~~~~~wS~Cs~~~~~~fl~~~~~~ws~Cs~~CG~G~r~r~~~Cl~~~p~~~~~~~~~~~~~~~~~~~Pg~~-   79 (656)
                      |++++...++.++||+||+.+|++||+.+                  ..+||.|.|....+  .++.      .+||+. 
T Consensus       347 m~~~~~~~~~~~~WS~CS~~~~t~fl~~~------------------~~~Cl~d~p~~~~~--~~p~------~lPg~~y  400 (845)
T KOG3538|consen  347 MSSDTCGGNHELTWSECSREYLTRFLDDG------------------EGNCLSDQPFSALP--KLPS------QLPGQTY  400 (845)
T ss_pred             cCcccccCCCCccCCcchHHHHHHHhccC------------------ccceeecCCccccC--CCCc------cCCcccc
Confidence            99999999999999999999999999987                  77999999963333  4555      799965 


Q ss_pred             ---CCCccccCCCCceeCCCCc--CccceeeccCCCCCCCccccCCCCCCCCCcccCC-CeeeecCeEeccCCCCCC--C
Q psy14790         80 ---EPCEGPCNAARWKFSPWGT--PVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGA-THWCQRGSCVARDTSSLR--P  151 (656)
Q Consensus        80 ---~qC~~~~~g~~~~~c~~~~--~~C~~lwC~~~~~~~~~C~t~~~p~~~Gt~C~G~-~~wC~~g~C~~~~~~~~~--~  151 (656)
                         +||+++| |..+++|+.+.  ++|..|||....+.. .|+|++.|+++||.| |. +|||.+|.|+......+.  +
T Consensus       401 ~~~~qC~~~f-g~~~~~c~~~~~~~~c~~lWC~~~~g~~-~C~t~~~p~~~gt~C-g~~~~~c~~g~c~~~~~~~~~~~~  477 (845)
T KOG3538|consen  401 DADEQCEFQF-GPKSKECPDMRAPDPCRELWCHTDGGSS-SCSTKHLPAADGTEC-GEFGKWCRKGRCTPRTPRAPPCIP  477 (845)
T ss_pred             CCCCcccccc-CCcceeccccCccchhhhhcccCCCCCC-ccccCcCCcccCCCc-CCcCCcccCCcccCcccccCCCCC
Confidence               9999999 99999999844  599999999777765 899999999999999 96 999999999998766333  4


Q ss_pred             cCCCCCCCCCCcCCCCCCCCCceEEEEEeecCCCCCCCccccCCCeeeeccCcCCCCC-CCCcccchhhccccCccCCCC
Q psy14790        152 RDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAP-GTMDFREEQCVKFNGNNFSVP  230 (656)
Q Consensus       152 ~~g~Ws~Ws~Ws~CS~tCG~G~~~r~R~C~~p~p~~gg~~C~G~~~~~~~Cn~~~Cp~-~~~~~r~~qC~~~~~~~~~~~  230 (656)
                      .+|.|+.|++|+.||+|||+|+++|.|.|+||.|.++|++|.|...+++.||+.+||. ...+||+.||+.++...+...
T Consensus       478 ~dg~w~~w~~ws~Cs~TCg~Gv~~~~r~C~np~p~~gg~~C~g~~~~~~~c~~~~C~~~~~~~fr~~qc~~~~~~~~~~~  557 (845)
T KOG3538|consen  478 FDGGWSSWSPWSPCSRTCGGGVQTRSRLCNNPRPANGGKYCPGERLRYRSCNTEPCPPPESESFREQQCSAFNGQELEPT  557 (845)
T ss_pred             CCCCccccCCCCccccccCCceeeeeEECCCCCCCCCCccCCCCCceeeecCCCCCCCCCccCHHHHhhhhhccccccCC
Confidence            5999999999999999999999999999999999999999999999999999999999 889999999999999887642


Q ss_pred             CCCCCceeccccCCCccc-ccccccccccceEEEecCcccCCCCCCCCCcccccCCeeecccccccccCCCccccccccC
Q psy14790        231 GLSRNVKWTPKYLGGDNA-CKLYCRVAQSSAYYLLKDKVIDGTPCGPDTFDVCINGKCMKAGCNHVLDSDSKLDFCGVCE  309 (656)
Q Consensus       231 ~~~~~~~W~p~~~~~~~~-C~l~C~~~~~~~~~~~~~~v~dGt~C~~~~~~~Ci~G~C~~~gCd~~l~S~~~~D~CgvC~  309 (656)
                        ...+.|.+++... .+ |+|+|+..+...++.+...|+|||+|.++..++|+.|.|+++|||++++|.+++|+|+||+
T Consensus       558 --~~~~~w~~~~~~~-~~~Ckl~C~~~~~~~~~~~~~~v~dgt~C~~~~~~~c~~g~C~~~~Cd~~~~s~~~~d~cgvCg  634 (845)
T KOG3538|consen  558 --LKPLQWVPKTAGV-EPDCKLFCRARGTGCVKSRSEQVKDGTPCGPDSVDVCVQGSCKKVGCDSELGSEAREDKCGVCG  634 (845)
T ss_pred             --cccceecccccCC-CCcceeccccccccccEEccccccCCCccCCCCcccccccEEeccCCCCccccccccccCCccC
Confidence              3567999988765 34 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccccccCccccCCCC-ccEEEecCCCCCeeeEEeeccCCCCCCCCcccccCCCCCceEecCceeeeCCcceEEEcc
Q psy14790        310 GNNQTCQEIRGSHNTSQYG-YTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHKVIVFGG  388 (656)
Q Consensus       310 Gd~s~C~~~~g~~~~~~~g-~~~v~~iP~ga~~i~i~~~~~s~~~~~~~~la~~~~~~~~~~lng~~~~~~~~~~~~~~g  388 (656)
                      ||+++|..+.++|+..... |..++.||+++++|.|.+..    ....+|++++....++|.+|+.|.+.+.. .+.++|
T Consensus       635 G~~s~c~~~~g~~~~~~~~~y~~v~~ip~~a~~i~v~~~~----~~~~~~~a~k~~~~~~~~~n~~~~i~~~~-~~~~~g  709 (845)
T KOG3538|consen  635 GDGSSCKTVSGTFNPSSKAGYNKVVEIPAGASHIRVRECL----CGSPHYLALKSSDCGKYSLNGRWQIQWPS-EFCCAG  709 (845)
T ss_pred             CCcccCceeeCCcccccCCccceeEEEeCCCceeeeeccc----cccccchhhhccCcCccccCCCccccccC-cccccc
Confidence            9999999999999986443 99999999999999999941    13579999999865899999999999555 788888


Q ss_pred             eEEEeccCCCceeeEecCCCCceeeee----ccccccCCCeEEEEEEeecCCCccccCCCCCcccccceeecCCCCCCCc
Q psy14790        389 IAIDYTGTDAVVERINCSRPLTKELIV----ECSKSCGTGVETRSAVCIDDYGREVDESQCSAAEKIIQRVCGTSKCPQW  464 (656)
Q Consensus       389 ~~~~y~~~~~~~e~i~~~gp~~~~~~~----~CS~tCG~G~q~R~~~C~~~~~~~v~~~~C~~~~~~~~~~C~~~~Cp~W  464 (656)
                      +.+.|....+..|.|...+|+.+.+.+    ........++++......+.  .     .     ..         =..|
T Consensus       710 ~~~~~~~~~~~~e~l~~~gp~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~--~-----~-----~~---------~~~w  768 (845)
T KOG3538|consen  710 TTRRYSRRPNTPESLEASGPLPETLTVQVLVQGDTVPNPGVRYEFTVPKDT--E-----P-----RR---------QYTW  768 (845)
T ss_pred             ceeeeccCcccceecccCCCcCCCceEEEEEecCCCCCCccceEEEcccCC--C-----c-----cc---------ceee
Confidence            999999999999999999999988754    33433333555555422111  0     0     00         0158


Q ss_pred             ccCCCcccccccCCCeEEEEEEEEcCCcccCCCCCCCCCCCCceeccCCCCC-CCCccCCCCCCCCCCCCccCCCCeEEE
Q psy14790        465 SVDKWSACSVSCGKGERRREIWCQRDNHVVHDSYCADDPVPARKEICYMAPC-PEWITGQFSAEVGKNPDQKMGKGTAIR  543 (656)
Q Consensus       465 ~~~~Ws~CS~tCG~G~~~R~~~C~~~~~~v~~~~C~~~~~p~~~~~C~~~~C-p~W~~~~Ws~~~~~~Cs~~Cg~G~q~R  543 (656)
                      ..+.|++||++||+|+|.|.+.|..... .          ....+.|+..+| +.|.+++|++     ||++||.|++.|
T Consensus       769 ~~~~w~~Cs~~cg~g~~~~~~~C~~~~~-~----------~~~~~~C~~~~c~~~w~~~~w~~-----Cs~~cg~g~~~r  832 (845)
T KOG3538|consen  769 AHGPWSECSASCGGGVQSRKVSCRRTFD-E----------VPRWRKCNLQPCPPRWVAGEWSE-----CSRTCGSGLRAR  832 (845)
T ss_pred             ecCCccccccccCCCceecccceeeccc-c----------CccccccCCCCCCCcceecCCch-----hhhhhcCccccc
Confidence            8899999999999999999999985422 1          356789999999 4499999999     999999999999


Q ss_pred             EEEeccC
Q psy14790        544 DVRCNLG  550 (656)
Q Consensus       544 ~~~C~~~  550 (656)
                      .|.|...
T Consensus       833 ~v~C~~~  839 (845)
T KOG3538|consen  833 SVACRDS  839 (845)
T ss_pred             ccccccc
Confidence            9999875

>KOG4597|consensus Back     alignment and domain information
>KOG4597|consensus Back     alignment and domain information
>PF05986 ADAM_spacer1: ADAM-TS Spacer 1; InterPro: IPR010294 This domain represents the Spacer-1 domain from the ADAM-TS family of metalloproteinases [] Back     alignment and domain information
>smart00209 TSP1 Thrombospondin type 1 repeats Back     alignment and domain information
>PTZ00087 thrombosponding-related protein; Provisional Back     alignment and domain information
>KOG3538|consensus Back     alignment and domain information
>PF00090 TSP_1: Thrombospondin type 1 domain; InterPro: IPR000884 Thrombospondins are multimeric multidomain glycoproteins that function at cell surfaces and in the extracellular matrix milieu Back     alignment and domain information
>KOG3539|consensus Back     alignment and domain information
>KOG3607|consensus Back     alignment and domain information
>smart00209 TSP1 Thrombospondin type 1 repeats Back     alignment and domain information
>KOG3539|consensus Back     alignment and domain information
>PF00090 TSP_1: Thrombospondin type 1 domain; InterPro: IPR000884 Thrombospondins are multimeric multidomain glycoproteins that function at cell surfaces and in the extracellular matrix milieu Back     alignment and domain information
>PTZ00087 thrombosponding-related protein; Provisional Back     alignment and domain information
>PTZ00441 sporozoite surface protein 2 (SSP2); Provisional Back     alignment and domain information
>KOG1480|consensus Back     alignment and domain information
>KOG1480|consensus Back     alignment and domain information
>smart00608 ACR ADAM Cysteine-Rich Domain Back     alignment and domain information
>PTZ00441 sporozoite surface protein 2 (SSP2); Provisional Back     alignment and domain information
>KOG3658|consensus Back     alignment and domain information
>smart00608 ACR ADAM Cysteine-Rich Domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query656
3vn4_A410 Crystal Structure Of The Exosite-Containing Fragmen 3e-30
3ghm_A410 Crystal Structure Of The Exosite-Containing Fragmen 8e-30
3ghn_A419 Crystal Structure Of The Exosite-Containing Fragmen 9e-30
2rjq_A378 Crystal Structure Of Adamts5 With Inhibitor Bound L 7e-21
3r6b_A153 Crystal Structure Of Thrombospondin-1 Tsr Domains 2 3e-11
1lsl_A113 Crystal Structure Of The Thrombospondin-1 Type 1 Re 3e-10
1w0r_A442 Solution Structure Of Dimeric Form Of Properdin By 1e-05
2jih_A300 Crystal Structure Of Human Adamts-1 Catalytic Domai 2e-04
3q2g_A297 Adamts1 In Complex With A Novel N-Hydroxyformamide 2e-04
2rjp_B316 Crystal Structure Of Adamts4 With Inhibitor Bound L 4e-04
>pdb|3VN4|A Chain A, Crystal Structure Of The Exosite-Containing Fragment Of Human Adamts13 (P475s Mutant) Length = 410 Back     alignment and structure 
Iteration: 1

 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 113/239 (47%), Gaps = 15/239 (6%)
Query: 100 VCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDTSSLRPRDGGWGPW 159
           +CQ L C +D  ++  C     P  DGT C G   WC +G C  R    L P     G W
Sbjct: 47  MCQALSCHTDPLDQSSCSRLLVPLLDGTEC-GVEKWCSKGRC--RSLVELTPIAAVHGRW 103
Query: 160 QSFGS---CSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFRE 216
            S+G    CSR CGGG+    R+C++P PA GG+ CVG  ++   CNT+ C    ++F  
Sbjct: 104 SSWGPRSPCSRSCGGGVVTRRRQCNNPRPAFGGRACVGADLQAEMCNTQACEKTQLEFMS 163
Query: 217 EQCVKFNGNNF-SVPGLSRNVKW--TPKYLGGDNACKLYCRVAQSSAYYLLKDKVIDGTP 273
           +QC + +G    S PG +    W     +  GD  C+  CR    S      D  +DGT 
Sbjct: 164 QQCARTDGQPLRSSPGGASFYHWGAAVSHSQGDALCRHMCRAIGESFIMKRGDSFLDGTR 223
Query: 274 CGPD------TFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQ 326
           C P       T  +C++G C   GC+  +DS    D C VC G+N TC   +GS    +
Sbjct: 224 CMPSGPREDGTLSLCVSGSCRTFGCDGRMDSQQVWDRCQVCGGDNSTCSPRKGSFTAGR 282
>pdb|3GHM|A Chain A, Crystal Structure Of The Exosite-Containing Fragment Of Human Adamts13 (Form-1) Length = 410 Back     alignment and structure
>pdb|3GHN|A Chain A, Crystal Structure Of The Exosite-Containing Fragment Of Human Adamts13 (Form-2) Length = 419 Back     alignment and structure
>pdb|3R6B|A Chain A, Crystal Structure Of Thrombospondin-1 Tsr Domains 2 And 3 Length = 153 Back     alignment and structure
>pdb|1LSL|A Chain A, Crystal Structure Of The Thrombospondin-1 Type 1 Repeats Length = 113 Back     alignment and structure
>pdb|1W0R|A Chain A, Solution Structure Of Dimeric Form Of Properdin By X-Ray Solution Scattering And Analytical Ultracentrifugation Length = 442 Back     alignment and structure
>pdb|2JIH|A Chain A, Crystal Structure Of Human Adamts-1 Catalytic Domain And Cysteine-rich Domain (complex-form) Length = 300 Back     alignment and structure
>pdb|3Q2G|A Chain A, Adamts1 In Complex With A Novel N-Hydroxyformamide Inhibitors Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query656
3ghm_A410 A disintegrin and metalloproteinase with thrombos 2e-60
2rjq_A378 Adamts-5; metalloprotease domain, aggrecanase, cle 4e-35
3r6b_A153 Thrombospondin-1; cell adhesion, disulfide bond, E 3e-27
3r6b_A153 Thrombospondin-1; cell adhesion, disulfide bond, E 7e-07
1lsl_A113 Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: 4e-21
1lsl_A113 Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: 6e-15
1lsl_A113 Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: 5e-06
2rjp_A316 Adamts-4; metalloprotease domain, aggrecanase, cle 7e-17
2v4b_A300 Adamts-1; zymogen, protease, hydrolase, metallopro 4e-16
3ojy_A554 Complement component C8 alpha chain; macpf, lipoca 9e-16
3ojy_B537 Complement component C8 beta chain; macpf, lipocal 5e-15
3ojy_B537 Complement component C8 beta chain; macpf, lipocal 6e-05
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 6e-13
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 1e-09
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 2e-09
1w0r_A 442 Properdin, factor P; X-RAY scattering, analytical 3e-09
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 4e-08
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 6e-06
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 1e-04
1vex_A56 F-spondin; TSR, cell adhesion; NMR {Rattus norvegi 6e-13
3k7n_A397 K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A { 4e-12
2ero_A427 VAP-1, vascular apoptosis-inducing protein 1; meta 2e-09
3g5c_A510 ADAM 22; alpha/beta fold, cross-linked domain, cel 3e-09
3t5o_A913 Complement component C6; macpf, MAC, membrane atta 2e-07
3t5o_A 913 Complement component C6; macpf, MAC, membrane atta 3e-05
3t5o_A913 Complement component C6; macpf, MAC, membrane atta 1e-04
3t5o_A 913 Complement component C6; macpf, MAC, membrane atta 3e-04
2dw0_A419 Catrocollastatin; apoptotic toxin, SVMP, metallopr 3e-07
3b8z_A217 Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1e-04
2e3x_A427 Coagulation factor X-activating enzyme light CHAI; 5e-04
>3ghm_A A disintegrin and metalloproteinase with thrombos motifs 13; thrombospondin type-1 motif, beta sandwich, hydrolase; HET: NAG FUC BGC; 2.60A {Homo sapiens} PDB: 3ghn_A* Length = 410 Back     alignment and structure
 Score =  206 bits (525), Expect = 2e-60
 Identities = 89/337 (26%), Positives = 138/337 (40%), Gaps = 25/337 (7%)

Query: 97  GTPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDT-SSLRPRDGG 155
              +CQ L C +D  ++  C     P  DGT C G   WC +G C +    + +    G 
Sbjct: 44  HLDMCQALSCHTDPLDQSSCSRLLVPLLDGTEC-GVEKWCSKGRCRSLVELTPIAAVHGR 102

Query: 156 WGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFR 215
           W  W     CSR CGGG+    R+C++P PA GG+ CVG  ++   CNT+ C    ++F 
Sbjct: 103 WSSWGPRSPCSRSCGGGVVTRRRQCNNPRPAFGGRACVGADLQAEMCNTQACEKTQLEFM 162

Query: 216 EEQCVKFNGNNF-SVPGLSRNVKWTPKYLGGD--NACKLYCRVAQSSAYYLLKDKVIDGT 272
            +QC + +G    S PG +    W            C+  CR    S      D  +DGT
Sbjct: 163 SQQCARTDGQPLRSSPGGASFYHWGAAVPHSQGDALCRHMCRAIGESFIMKRGDSFLDGT 222

Query: 273 PCGPD------TFDVCINGKCMKAGCNHVLDSDSKLDFCGVCEGNNQTCQEIRGSHNTSQ 326
            C P       T  +C+ G C   GC+  +DS    D C VC G+N TC   +GS    +
Sbjct: 223 RCMPSGPREDGTLSLCVLGSCRTFGCDGRMDSQQVWDRCQVCGGDNSTCSPRKGSFTAGR 282

Query: 327 -YGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKNVVSKSHK-VI 384
              Y   L +    +++ I             +LA+        ++ GK  +S +     
Sbjct: 283 AREYVTFLTVTPNLTSVYIAN-----HRPLFTHLAVRI--GGRYVVAGKMSISPNTTYPS 335

Query: 385 VFGGIAIDYT-----GTDAVVERINCSRPLTKELIVE 416
           +     ++Y           +E I    PL ++  ++
Sbjct: 336 LLEDGRVEYRVALTEDRLPRLEEIRIWGPLQEDADIQ 372
>3r6b_A Thrombospondin-1; cell adhesion, disulfide bond, EGF-like domain, TSP-1 type 1; 2.40A {Homo sapiens} Length = 153 Back     alignment and structure
>3r6b_A Thrombospondin-1; cell adhesion, disulfide bond, EGF-like domain, TSP-1 type 1; 2.40A {Homo sapiens} Length = 153 Back     alignment and structure
>1lsl_A Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: FUL FUC; 1.90A {Homo sapiens} SCOP: g.60.1.1 g.60.1.1 Length = 113 Back     alignment and structure
>1lsl_A Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: FUL FUC; 1.90A {Homo sapiens} SCOP: g.60.1.1 g.60.1.1 Length = 113 Back     alignment and structure
>1lsl_A Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: FUL FUC; 1.90A {Homo sapiens} SCOP: g.60.1.1 g.60.1.1 Length = 113 Back     alignment and structure
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A* Length = 300 Back     alignment and structure
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Length = 554 Back     alignment and structure
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Length = 537 Back     alignment and structure
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Length = 537 Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Length = 442 Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Length = 442 Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Length = 442 Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Length = 442 Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Length = 442 Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Length = 442 Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Length = 442 Back     alignment and structure
>1vex_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus} Length = 56 Back     alignment and structure
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra} Length = 397 Back     alignment and structure
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A* Length = 427 Back     alignment and structure
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens} Length = 510 Back     alignment and structure
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Length = 913 Back     alignment and structure
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Length = 913 Back     alignment and structure
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Length = 913 Back     alignment and structure
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Length = 913 Back     alignment and structure
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A* Length = 419 Back     alignment and structure
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A* Length = 217 Back     alignment and structure
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis} Length = 427 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query656
3ghm_A410 A disintegrin and metalloproteinase with thrombos 100.0
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 100.0
1w0r_A442 Properdin, factor P; X-RAY scattering, analytical 100.0
2rjq_A378 Adamts-5; metalloprotease domain, aggrecanase, cle 99.94
3r6b_A153 Thrombospondin-1; cell adhesion, disulfide bond, E 99.76
1lsl_A113 Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: 99.72
3r6b_A153 Thrombospondin-1; cell adhesion, disulfide bond, E 99.72
1lsl_A113 Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: 99.66
2ero_A427 VAP-1, vascular apoptosis-inducing protein 1; meta 99.62
2rjp_A316 Adamts-4; metalloprotease domain, aggrecanase, cle 99.54
2e3x_A427 Coagulation factor X-activating enzyme light CHAI; 99.41
1vex_A56 F-spondin; TSR, cell adhesion; NMR {Rattus norvegi 99.4
2v4b_A300 Adamts-1; zymogen, protease, hydrolase, metallopro 99.4
2dw0_A419 Catrocollastatin; apoptotic toxin, SVMP, metallopr 99.39
1szl_A61 F-spondin; TSR, cell adhesion; NMR {Rattus norvegi 99.23
2bbx_A49 Trap, thrombospondin-related anonymous protein; el 99.13
3t5o_A 913 Complement component C6; macpf, MAC, membrane atta 99.08
3ojy_B537 Complement component C8 beta chain; macpf, lipocal 99.0
3k7n_A397 K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A { 98.95
3t5o_A 913 Complement component C6; macpf, MAC, membrane atta 98.95
3k7l_A422 Atragin; SVMP, metalloprotease, hydrolase; HET: NA 98.95
3ojy_A554 Complement component C8 alpha chain; macpf, lipoca 98.94
3g5c_A510 ADAM 22; alpha/beta fold, cross-linked domain, cel 98.93
3vdj_A77 Circumsporozoite (CS) protein; TSR, ATSR, cell inv 98.64
1vex_A56 F-spondin; TSR, cell adhesion; NMR {Rattus norvegi 98.6
2bbx_A49 Trap, thrombospondin-related anonymous protein; el 98.52
4hqf_A281 Thrombospondin-related anonymous protein, trap; ma 98.38
1szl_A61 F-spondin; TSR, cell adhesion; NMR {Rattus norvegi 98.32
3vdj_A77 Circumsporozoite (CS) protein; TSR, ATSR, cell inv 98.12
2rjq_A378 Adamts-5; metalloprotease domain, aggrecanase, cle 98.03
4hqf_A281 Thrombospondin-related anonymous protein, trap; ma 97.55
3ghm_A 410 A disintegrin and metalloproteinase with thrombos 97.39
3ojy_B537 Complement component C8 beta chain; macpf, lipocal 97.24
4hqo_A266 Sporozoite surface protein 2; malaria, gliding mot 97.09
3ojy_A554 Complement component C8 alpha chain; macpf, lipoca 96.89
2i47_A288 ADAM 17; TACE-inhibitor complex, hydrolase; HET: I 94.53
4hqo_A266 Sporozoite surface protein 2; malaria, gliding mot 93.93
2ero_A427 VAP-1, vascular apoptosis-inducing protein 1; meta 84.23
>3ghm_A A disintegrin and metalloproteinase with thrombos motifs 13; thrombospondin type-1 motif, beta sandwich, hydrolase; HET: NAG FUC BGC; 2.60A {Homo sapiens} PDB: 3ghn_A* 3vn4_A* Back     alignment and structure
Probab=100.00  E-value=5.9e-70  Score=582.36  Aligned_cols=333  Identities=28%  Similarity=0.583  Sum_probs=294.6

Q ss_pred             CCCCCC----CCCccccCCCCceeCCCC---cCccceeeccCCCCCCCccccCCCCCCCCCcccCCCeeeecCeEeccCC
Q psy14790         74 PRPAER----EPCEGPCNAARWKFSPWG---TPVCQHLWCTSDEGEREGCHTQTSPWADGTPCYGATHWCQRGSCVARDT  146 (656)
Q Consensus        74 ~~Pg~~----~qC~~~~~g~~~~~c~~~---~~~C~~lwC~~~~~~~~~C~t~~~p~~~Gt~C~G~~~wC~~g~C~~~~~  146 (656)
                      .+||++    +||+|+| |..+++|++.   +++|..|||.+..+.+..|+|+++||+|||.| |.+|||+.|+|+....
T Consensus        15 ~lPG~~y~~d~QC~l~f-G~~~~~C~~~~~~~~~C~~LwC~~~~~~~~~C~t~~~P~~dGT~C-g~~kwC~~G~Cv~~~~   92 (410)
T 3ghm_A           15 AQPGLYYSANEQCRVAF-GPKAVACTFAREHLDMCQALSCHTDPLDQSSCSRLLVPLLDGTEC-GVEKWCSKGRCRSLVE   92 (410)
T ss_dssp             CCGGGTSCHHHHHHHHT-CTTCEEC--------CCSSCCEESSTTCCSCCBCCSSCCCTTCEE-ETTEEEETTEEEEHHH
T ss_pred             CCCcceEccccCcCccc-CCCceecCCccccCCcCcccCCCCCCCCCccceeCCCCCCCCccC-CCCCeEcCCccccccC
Confidence            899999    9999999 9999999974   37999999998766667899999999999999 9999999999998543


Q ss_pred             C-CCCCcCCCCCCCCCCcCCCCCCCCCceEEEEEeecCCCCCCCccccCCCeeeeccCcCCCCCCCCcccchhhccccCc
Q psy14790        147 S-SLRPRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDCAPGTMDFREEQCVKFNGN  225 (656)
Q Consensus       147 ~-~~~~~~g~Ws~Ws~Ws~CS~tCG~G~~~r~R~C~~p~p~~gg~~C~G~~~~~~~Cn~~~Cp~~~~~~r~~qC~~~~~~  225 (656)
                      . +..+++|+|+.|++||.||++||+|++.|+|.|++|.|.+||+.|.|...+++.||+++||....+||++||++++..
T Consensus        93 ~~p~~~vdG~Ws~Ws~WS~CS~tCG~G~~~R~R~C~~p~P~~GG~~C~G~~~~~~~Cn~~~Cp~~~~~Fr~~QCs~~n~~  172 (410)
T 3ghm_A           93 LTPIAAVHGRWSSWGPRSPCSRSCGGGVVTRRRQCNNPRPAFGGRACVGADLQAEMCNTQACEKTQLEFMSQQCARTDGQ  172 (410)
T ss_dssp             HCSCCCBCCCCCCCCCCCCCSCSSSCEEEECCCCSCTTCCBSSCCCCCSCSCCEEEECCSCCSSCHHHHHHHHHHTTTTS
T ss_pred             CCCcCcccCCCCCCCCCCcccCCCCCCcccceeccCCCCcCCCCCCCCCCCeeeEeCCCcccCccccchhHHhhhhhccC
Confidence            2 235799999999999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             cCCC-CCCCCCceeccccCCC--cccccccccccccceEEEecCcccCCCCCCCC------CcccccCCeeecccccccc
Q psy14790        226 NFSV-PGLSRNVKWTPKYLGG--DNACKLYCRVAQSSAYYLLKDKVIDGTPCGPD------TFDVCINGKCMKAGCNHVL  296 (656)
Q Consensus       226 ~~~~-~~~~~~~~W~p~~~~~--~~~C~l~C~~~~~~~~~~~~~~v~dGt~C~~~------~~~~Ci~G~C~~~gCd~~l  296 (656)
                      +|.+ .+.+.+|+|+|++...  +++|+|+|++.+..+++.+.++|+|||||+++      +++|||+|+|+++|||++|
T Consensus       173 ~~~~~~~~~~~~~W~p~~~~~~~~~~C~L~C~~~g~~~~~~~~~~V~DGT~C~~~~~~~~gs~~vCV~G~C~~vGCD~~l  252 (410)
T 3ghm_A          173 PLRSSPGGASFYHWGAAVPHSQGDALCRHMCRAIGESFIMKRGDSFLDGTRCMPSGPREDGTLSLCVLGSCRTFGCDGRM  252 (410)
T ss_dssp             CC-------CCCCEEECTTTSCHHHHHTTEEEETTSCCEEECSSCCCTTCBCCCSSCCCTTCEEEEETTEEEEECTTSBB
T ss_pred             ccccccCCCcceEEEeccccCCCCCCcEEEEEECCCeeEEEecceeccCCCCCCCCcccccccceEEccccccccCCccc
Confidence            8864 3456789999987643  68999999999999999999999999999874      4689999999999999999


Q ss_pred             cCCCccccccccCCCCcccccccCccccC-CCCccEEEecCCCCCeeeEEeeccCCCCCCCCcccccCCCCCceEecCce
Q psy14790        297 DSDSKLDFCGVCEGNNQTCQEIRGSHNTS-QYGYTRVLRIPAGSSNLDITQYGYGGTSSDDNYLALSDGETNEPILNGKN  375 (656)
Q Consensus       297 ~S~~~~D~CgvC~Gd~s~C~~~~g~~~~~-~~g~~~v~~iP~ga~~i~i~~~~~s~~~~~~~~la~~~~~~~~~~lng~~  375 (656)
                      +|.+++|+||||||||++|++|+|+|++. ..||..|++||+||++|+|.+...     ..|||||+.  .++|+|||+|
T Consensus       253 ~S~~~~D~CGVCgGdgstC~~v~G~f~~~~~~gY~~v~~IP~GA~~I~I~e~~~-----s~n~LAl~~--~g~y~lNG~~  325 (410)
T 3ghm_A          253 DSQQVWDRCQVCGGDNSTCSPRKGSFTAGRAREYVTFLTVTPNLTSVYIANHRP-----LFTHLAVRI--GGRYVVAGKM  325 (410)
T ss_dssp             TCCCCBCTTSCBTCCSCSEEEEEEEECCCCBTEEEEEEEECTTCEEEEEEESCT-----TSEEEEEEE--TTEEEECCSS
T ss_pred             ccccccccccccCCCCCEeeeeeeeeccCCCCcceEEEecCCCceEEEEEccCC-----CccEEEEec--CCeEEecCCc
Confidence            99999999999999999999999999985 568999999999999999999974     379999983  6999999999


Q ss_pred             eeeCCcceEE--EcceEEEeccCCC-----ceeeEecCCCCceeeeec
Q psy14790        376 VVSKSHKVIV--FGGIAIDYTGTDA-----VVERINCSRPLTKELIVE  416 (656)
Q Consensus       376 ~~~~~~~~~~--~~g~~~~y~~~~~-----~~e~i~~~gp~~~~~~~~  416 (656)
                      .+++++ .+.  ++|+.|+|++...     ..|+|.+.||+.++|+++
T Consensus       326 ~i~~~~-~~~~~~~gt~~~Y~~~~~~~~~~~~E~l~a~GP~~e~l~v~  372 (410)
T 3ghm_A          326 SISPNT-TYPSLLEDGRVEYRVALTEDRLPRLEEIRIWGPLQEDADIQ  372 (410)
T ss_dssp             SCCCSE-EESCTTCSSEEEEEEEECSSSCEEEEEEEEESCCSSCEEEE
T ss_pred             cccCCc-ceeeeeCCcEEEEEecccCCCCCCceEEECCCCCCCCEEEE
Confidence            999987 443  4899999986432     479999999999999774
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Back     alignment and structure
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A Back     alignment and structure
>3r6b_A Thrombospondin-1; cell adhesion, disulfide bond, EGF-like domain, TSP-1 type 1; 2.40A {Homo sapiens} Back     alignment and structure
>1lsl_A Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: FUL FUC; 1.90A {Homo sapiens} SCOP: g.60.1.1 g.60.1.1 Back     alignment and structure
>3r6b_A Thrombospondin-1; cell adhesion, disulfide bond, EGF-like domain, TSP-1 type 1; 2.40A {Homo sapiens} Back     alignment and structure
>1lsl_A Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: FUL FUC; 1.90A {Homo sapiens} SCOP: g.60.1.1 g.60.1.1 Back     alignment and structure
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A* Back     alignment and structure
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis} Back     alignment and structure
>1vex_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus} Back     alignment and structure
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A* Back     alignment and structure
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A* Back     alignment and structure
>1szl_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus} Back     alignment and structure
>2bbx_A Trap, thrombospondin-related anonymous protein; elongated three-stranded structure, cell adhesion; NMR {Plasmodium falciparum} Back     alignment and structure
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Back     alignment and structure
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Back     alignment and structure
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra} Back     alignment and structure
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Back     alignment and structure
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra} Back     alignment and structure
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Back     alignment and structure
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens} Back     alignment and structure
>3vdj_A Circumsporozoite (CS) protein; TSR, ATSR, cell invasion; 1.70A {Plasmodium falciparum} PDB: 3vdk_A 3vdl_A Back     alignment and structure
>1vex_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus} Back     alignment and structure
>2bbx_A Trap, thrombospondin-related anonymous protein; elongated three-stranded structure, cell adhesion; NMR {Plasmodium falciparum} Back     alignment and structure
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A Back     alignment and structure
>1szl_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus} Back     alignment and structure
>3vdj_A Circumsporozoite (CS) protein; TSR, ATSR, cell invasion; 1.70A {Plasmodium falciparum} PDB: 3vdk_A 3vdl_A Back     alignment and structure
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A Back     alignment and structure
>3ghm_A A disintegrin and metalloproteinase with thrombos motifs 13; thrombospondin type-1 motif, beta sandwich, hydrolase; HET: NAG FUC BGC; 2.60A {Homo sapiens} PDB: 3ghn_A* 3vn4_A* Back     alignment and structure
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Back     alignment and structure
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A* Back     alignment and structure
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens} Back     alignment and structure
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A* Back     alignment and structure
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A* Back     alignment and structure
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 656
d1lsla259 g.60.1.1 (A:470-528) Thrombospondin-1 (TSP-1) {Hum 5e-16
d1lsla154 g.60.1.1 (A:416-469) Thrombospondin-1 (TSP-1) {Hum 8e-16
d1vmoa_163 b.77.1.1 (A:) Vitelline membrane outer protein-I ( 7e-04
>d1lsla2 g.60.1.1 (A:470-528) Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 59 Back     information, alignment and structure

class: Small proteins
fold: TSP-1 type 1 repeat
superfamily: TSP-1 type 1 repeat
family: TSP-1 type 1 repeat
domain: Thrombospondin-1 (TSP-1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 5e-16
 Identities = 28/57 (49%), Positives = 36/57 (63%)

Query: 151 PRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDC 207
           P +GGWGPW  +  CS  CGGG++K  R C++P P  GGK CVG     + CN +DC
Sbjct: 3   PINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQICNKQDC 59
>d1lsla1 g.60.1.1 (A:416-469) Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 54 Back     information, alignment and structure
>d1vmoa_ b.77.1.1 (A:) Vitelline membrane outer protein-I (VMO-I) {Hen (Gallus gallus) [TaxId: 9031]} Length = 163 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query656
d1lsla259 Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [Ta 99.65
d1lsla154 Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [Ta 99.56
d1vmoa_163 Vitelline membrane outer protein-I (VMO-I) {Hen (G 99.39
d1vmoa_163 Vitelline membrane outer protein-I (VMO-I) {Hen (G 99.25
d1lsla259 Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [Ta 98.75
d1lsla154 Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [Ta 98.34
>d1lsla2 g.60.1.1 (A:470-528) Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Small proteins
fold: TSP-1 type 1 repeat
superfamily: TSP-1 type 1 repeat
family: TSP-1 type 1 repeat
domain: Thrombospondin-1 (TSP-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=4.8e-17  Score=124.39  Aligned_cols=58  Identities=48%  Similarity=1.179  Sum_probs=56.4

Q ss_pred             CCcCCCCCCCCCCcCCCCCCCCCceEEEEEeecCCCCCCCccccCCCeeeeccCcCCC
Q psy14790        150 RPRDGGWGPWQSFGSCSRPCGGGIKKSYRECSSPAPANGGKYCVGKRVRYRSCNTRDC  207 (656)
Q Consensus       150 ~~~~g~Ws~Ws~Ws~CS~tCG~G~~~r~R~C~~p~p~~gg~~C~G~~~~~~~Cn~~~C  207 (656)
                      +|+||+|++|++|+.||++||+|+++|+|.|++|.|.+||+.|+|...+++.||+++|
T Consensus         2 CPvdg~ws~Ws~Ws~CS~tCG~G~~~R~R~c~~p~p~~gg~~C~G~~~e~~~C~~~~C   59 (59)
T d1lsla2           2 CPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQICNKQDC   59 (59)
T ss_dssp             CCBCCCCCCCCCCCCCSCSSSCEEEEEECCSCTTCCBTTCCCCCSCSEEEEEECCSCC
T ss_pred             cCcCCCcCCCCCCCCCcCcCCCCcEEEEEEeCCCCcccCCCCCCCCCeEEeEeCCCcC
Confidence            6899999999999999999999999999999999999999999999999999999887
>d1lsla1 g.60.1.1 (A:416-469) Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vmoa_ b.77.1.1 (A:) Vitelline membrane outer protein-I (VMO-I) {Hen (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1vmoa_ b.77.1.1 (A:) Vitelline membrane outer protein-I (VMO-I) {Hen (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1lsla2 g.60.1.1 (A:470-528) Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lsla1 g.60.1.1 (A:416-469) Thrombospondin-1 (TSP-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure